BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase
protein [Candidatus Liberibacter asiaticus str. psy62]
(352 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 352
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF
Sbjct: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS
Sbjct: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF
Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ
Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK
Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS
Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
>gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 351
Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust.
Identities = 285/351 (81%), Positives = 320/351 (91%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
M + LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQF
Sbjct: 1 MNSHDQKLTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IPQKEE+NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGS
Sbjct: 61 IPQKEEMNILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGS 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QKGT+LS +D +AAL+YIQ +IWEVIFTGGDPLILS RL+ VLK L IKHV+ILRF
Sbjct: 121 QKGTILSPQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRF 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSRVPIVDPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQ
Sbjct: 181 HSRVPIVDPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE
Sbjct: 241 SVLLKGINDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKEN 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
ISG+CQPFYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S
Sbjct: 301 ISGICQPFYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351
>gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
Length = 350
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/347 (60%), Positives = 266/347 (76%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
H+ L +A DL A LI + I +++ Y+IA++PV+ANLI+ +P DPI+RQF+P
Sbjct: 4 HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL + PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 64 AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AA+AYI E +IWEVI TGGDPL+LS +RLQ++L+ L I HV+++RFH+RV
Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V+P RI+ +LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL
Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL
Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
CQP YILD+PGG+GK I I+ G G Y +TD H H YPPKS
Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350
>gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 350
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 260/344 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VYIA+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPP 348
>gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
Length = 349
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++ ++ Y+I LTP I LI+ +PNDPIARQF+P
Sbjct: 5 KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + EAA YI +IWEVI TGGDPL+LS +RL++++K L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
QP YILD+PGG+GK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPP 348
>gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021]
gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021]
gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
Length = 350
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + +A++L +A L+ +EQ + I +++ Y++A++P IA L++ +PNDPIARQF+P
Sbjct: 5 RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + +AALAYI + +IWEVI TGGDPL+LS +RL ++ L I HV+++RFH+RVP
Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + I+ G G Y +TD HDYPPK
Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350
>gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 350
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 259/344 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L SA DL A L+ ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +++ L+ LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC
Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
QP YILD+PGGYGK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPP 348
>gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
Length = 363
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/349 (57%), Positives = 267/349 (76%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R +T+ + + L A LI+ E ++ ++ ++ Y++A+TP + L++ H+P DPIARQF+P
Sbjct: 12 RFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQFVPD 71
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 72 LAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 131
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++S ++ +AA AYI+E IWEVI TGGDPL+LS +RL ++K LR I HV+I+RFH+R
Sbjct: 132 GMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVRFHTR 191
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+VDP RI+ LI+ LK +GK Y+A+HANH E + A A +RL +AGI ++SQ+VL
Sbjct: 192 VPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVSQTVL 251
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG
Sbjct: 252 LKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 311
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
LCQP Y+LD+PGG+GK I + +K +G Y ++D + H YPP +S
Sbjct: 312 LCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360
>gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 350
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 259/344 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + AA YI+ +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPP 348
>gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652]
gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652]
Length = 350
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 259/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + + DL A L + ++E++ Y+IALTPV+A LI+ +P+DPIARQF+P
Sbjct: 5 KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + ER DPIGD HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI + +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350
>gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56]
Length = 350
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 256/346 (73%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L S DL A L + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350
>gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
Length = 350
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 263/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + DL A LI + ++ ++ Y+IALTP +A LI+ +P DPIARQF+P
Sbjct: 5 RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +AA AYI++ +IWEVI TGGDPL+LS +RL+++L+ L I+HV+I+RFH+RVP
Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK
Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++++G G Y ++D+ H YPP+
Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350
>gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5]
Length = 350
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 195/343 (56%), Positives = 256/343 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L + DL A L+ + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
QP YILD+PGG+GK I ++ G+G Y ++D+ H YP
Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYP 347
>gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT
894]
Length = 350
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 257/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ I LK +GK VY+A+HANH E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGGYGK + ++ G G Y ++D+ H YPP +
Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350
>gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
Length = 350
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ + +DL A LI +E+ + I ++ Y++A++P I+ L++ +P+DPIARQF+P
Sbjct: 5 RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + + A+AYI +IWEVI TGGDPL+LS +RL ++++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + A AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + +I+ G G Y +TD H YPPK
Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350
>gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
Length = 354
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 264/349 (75%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R +T+ + + L A LIK E +++++ ++ Y++A+T +A+L++ +P DPIARQF+P
Sbjct: 3 RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 63 LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++S ++ +AA YI+ IWEVI TGGDPL+LS +RL ++ L+ + HV+I+RFH+R
Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+VDP+RI+ LI+ LK +GK Y+A+HANH E + A +A +RL +AGI ++SQ+VL
Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKGINDD ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG
Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
LCQP Y+LD+PGG+GK I + +K +G Y I+D + H YPP +S
Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351
>gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
Length = 349
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KT+ + ++L L+ E E+ ++ Y+IA+TP + LI+P++P DPIA QF+PQ
Sbjct: 6 KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG +
Sbjct: 66 ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +AA+ YI++ IWEVIFTGGDPL+LS +RL+ +L+ L I HV+I+RFHSRVP
Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI+ +LI L+ +GK YIAIHANHP E + +A AA ++L AG LLSQ+VLLK
Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L +SGLC
Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG+GK ID I K G+ Y +TD H H Y
Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346
>gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 356
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 243/344 (70%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S DL A LI EQ + E+ ++I LT ++A+LIN ++P DPIARQF+P E
Sbjct: 12 ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEE +DPIGD SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG L
Sbjct: 72 ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +AA AYI IWEVI TGGDPLILS +RL ++L+ L I HV+ILR H+RVP
Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
VDP+RI P+L+ L+ + K VY+A+HANHP E + +A A + +AGI +LSQSVLL+G
Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++ L+ +SGLCQ
Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y+LDLPGG+GK + + + + + D+ ++H YPPK
Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355
>gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
Length = 356
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ + + ++ +++ Y++A+TP +A+LI P D I RQF+P
Sbjct: 1 MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIE--TPEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ EEL+ P ER DPIGD H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG
Sbjct: 59 RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS +AALAY+ + +IWEV+ TGGDP +LS +RL+++ L HV++LR H+
Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP V+P+R++ L+ LK G+ V++A+HANHP EF+ A AAI+RL +AGI L+SQSV
Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++ GQ ++ L+ ++S
Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GLCQP Y+LD+PGG+GKV + ++ G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346
>gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2]
gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L E D++++++ Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E
Sbjct: 14 TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G K L
Sbjct: 74 LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +R+ +++ L I HV+I+RFH+RVP+
Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI PEL++ L+ GK ++A+HANHP E + A AA + L +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK I T V + Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362
>gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
Length = 356
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ ++ E++ ++ Y++A+TP +A LI P D I RQF+P
Sbjct: 1 MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELIE--APEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL+ P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG +
Sbjct: 59 SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L + +AALAYI + +IWEV+ TGGDP +L+ +RL+++ L ++HV++LR H+
Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+VDP R++ L+ LK G+ V++A+HANHP EF+ + AA++RL +AGI L+SQSV
Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDD E L LMR FVE R+KPYYLHH DLA GT HFR + EGQ ++ L+ ++S
Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
GLCQP Y+LD+PGG+GKV + + G G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345
>gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
Length = 363
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 250/350 (71%), Gaps = 1/350 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
LR KTL SA DL A L + EI+ + Y IA+TP IA LI+ PNDPIARQF+
Sbjct: 12 SLRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFV 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL+ PE+ DPIGD +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG
Sbjct: 72 PDIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPG 131
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K LS + +AALAYI +IWEVI TGGDP LS +RL ++++ L I+HV+I+R H
Sbjct: 132 KSAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVH 191
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP VDP I+ LI LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQS
Sbjct: 192 TRVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQS 251
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++ L+ ++
Sbjct: 252 VLLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRL 311
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350
SGLCQP Y+LD+PGG+GK I I+ G NG + + D+ H YPP+
Sbjct: 312 SGLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361
>gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009]
gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris
CGA009]
Length = 363
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 245/349 (70%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNG---SYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + G G Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362
>gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
Length = 357
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 243/347 (70%), Gaps = 4/347 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L + L+ +E + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 10 TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L I P ER DPIGDN SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K + L
Sbjct: 70 LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+RFH+RVP+
Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R+ E+ + L ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G
Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++ L+ +SGLCQ
Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC----ITDHHNIVHDYPP 349
P Y+LD+PGGYGK+ + + + +G + D+ VH YPP
Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPP 356
>gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
Length = 363
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/349 (52%), Positives = 248/349 (71%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNGS---YCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + G G+ Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362
>gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
Length = 353
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ +P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 356
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 230/325 (70%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
M + LTS DL A L D + + Y+I++TP +A+LI+P++P DPIARQF
Sbjct: 1 MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL ER DPIGD SP G+VHRYPDR+LLK+ VCPVYCRFCFRREMVG
Sbjct: 61 VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G LS+ D AA+AYI+ +WEVI TGGDPL+LS +R+++V + L I HV+ILR+
Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+RVP+VDP R+ ELI LK K V++ +H NH E + A A+++L +AGI L+SQ
Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++ L+++
Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+SGL P Y+LDLPG +GKV ++++
Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESY 325
>gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
Length = 353
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + L I HV++LRFH+RVP+
Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347
>gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
Length = 347
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ L SA DL +A LI + D + + Y++++TP +A LI+P +P+DPI RQF+P+
Sbjct: 2 NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E PEER DPIGD H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG
Sbjct: 62 AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AALAYI + +IWEV+ TGGDP LS +RL + + L I HV+++R H+RV
Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P ++ L++ LK G+ V++A+HANHP EF+ A AA +RL +AGI L+ QSVLL
Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND+ L LMRT VE RIKPYYLHH DLA GT+H R + EGQ ++ +L+ ++SGL
Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV I ++ +G +TD H YPPK+
Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDGVR-VTDPGGQDHAYPPKA 347
>gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI++L +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + +GQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
Length = 353
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/345 (50%), Positives = 241/345 (69%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A L+ E + ++ ++ Y++++T +A LI+ +P+DPIARQF+P+ EE
Sbjct: 4 ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG L
Sbjct: 64 IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI + +IWEV+ TGGDP LS +RL ++ TL I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ +++ LK+ V++A+HANHP EF+ A AAI+RL +AG+ ++SQSVLL+G
Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + +++ +G++ +TD VH YPP +
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPPGT 347
>gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4]
gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK
[Methylobacterium extorquens DM4]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + + ++ ++ Y++++T +A LI+ +P DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347
>gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
Length = 357
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L NL+ ++ + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 11 TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ER DPIGD HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 71 LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL+++ L I HV+I+RFH+RVPI
Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP+R+ E+ L+ ++A+HANHP E + A AA +RL + GI L+SQSVLL+G
Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++ L+ +SGLCQ
Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350
P Y+LD+PGG+GK+ + + G G + D+ VH YPP+
Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357
>gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
Length = 363
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL ++L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L+Q L+ K ++A+HANHP EF+ A A +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP+ L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGK + + + N Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363
>gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
Length = 353
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL S L +A L+ + ++ ++ ++ +++A+TP +A L++P +P DP+ARQF+P
Sbjct: 10 RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL PEE DPIGD SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG T
Sbjct: 70 AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L D +AAL YI + +IWEVI TGGDPLILS +RL +++ L I HV I+R HSRV
Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+VDP+R+ EL+ L+ ++ +HANH E +EEA AAI+RL +AGI +LSQSVLL
Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDD E LA R V R+KP+YLH DLA GT+HFR T+ EGQ ++ +L+ +SGL
Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GKV + + + G G + +TD H Y
Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351
>gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 244/347 (70%), Gaps = 4/347 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L + L SAQ L A L+ E++ I+ ++ Y++A+TP +A LI+P N +DPIARQFIP
Sbjct: 2 LPARPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ EL+ P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 62 SEAELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEG 121
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L+ + +AA AYI S+IWEVI TGGDPL+LS +RL+ + + L I+HV+++RFH+
Sbjct: 122 LANLTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHT 181
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+VDP I E++ LK +GK VY+A+HANH E +E A AA +R+ +AG+ +LSQ+V
Sbjct: 182 RIPVVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTV 241
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKGINDDPE L LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + S
Sbjct: 242 LLKGINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFS 301
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
GLCQP Y+LD+P G+GKV I + G + D + H YPP
Sbjct: 302 GLCQPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPP 344
>gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
Length = 376
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 229/346 (66%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L+ E ++ + YS+A+T A L++ +P DPIARQF+P E
Sbjct: 22 TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ LPEE DPIGD+ SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG KG L
Sbjct: 82 LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S AL YI E+ +I+EVI TGGDPL LS +RL + + LR I HV +LR H+R P
Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P + PE + L +GK VY+A+H NH E + A AI+R+ AG+ L+Q+VLL+G
Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR LR+KPYYLHHPDLA GT+HFRL+IEEG+ + L +ISG+
Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGKV + + +I++ G + + D H YP + +
Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367
>gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
Length = 346
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL + L A LI E++ ++ ++ Y++A+TP +A LI+ +PNDPIARQF+P E
Sbjct: 5 KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD+ HSP+ GI+HRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI + QIWEVI TGGDP +LS +RL ++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + +L+ LK + K VY+A+HANH E + A AA + L +AGI ++SQ+VLLK
Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+ +SGL
Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + G + D + H YPP +
Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345
>gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
Length = 362
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L D + ++ Y++A+TP + + I+ +P DPIARQF+P E
Sbjct: 19 TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + PEE DPIGD HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG L
Sbjct: 79 LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + E A AY+ +IWEVI TGGDP +LS +R+ +V+ L I HV+I+RFH+RVPI
Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R++ LI LK G Y+A+H NH E + +A +A++R+A+AGI LLSQSVLL+G
Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I GQ+++ +L+ ++SG+
Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGG GKV + +I G ++D+ VH YPP+
Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361
>gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
Length = 365
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/356 (51%), Positives = 245/356 (68%), Gaps = 10/356 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
T+ +DL L + ++++++ Y+IA+TP +A LI+P +P+DPIARQ++P
Sbjct: 10 STVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSAN 69
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T
Sbjct: 70 ELAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETA 129
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP
Sbjct: 130 LSKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ D R+ E++ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+
Sbjct: 190 VADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLR 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLC
Sbjct: 250 GVNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLC 309
Query: 306 QPFYILDLPGGYGKVKI--DTHNIKKVGNGS--------YCITDHHNIVHDYPPKS 351
QP Y+LD+PGGYGKV + D ++ + Y ITD+ VH YPP S
Sbjct: 310 QPDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365
>gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255]
gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255]
Length = 366
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 242/355 (68%), Gaps = 10/355 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
TL +DL L + ++++++ Y+IA+TP +ANLI+P +P+DPIARQ++P +
Sbjct: 11 STLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSAD 70
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ER DPIGD+ SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T
Sbjct: 71 ELAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP
Sbjct: 131 LSKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 190
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R+ E+ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+
Sbjct: 191 VADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLR 250
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD L LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++ L+ ++SGLC
Sbjct: 251 GVNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLC 310
Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350
QP Y+LD+PGGYGK + + G G Y ITD+ VH YPPK
Sbjct: 311 QPDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365
>gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14]
gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14]
Length = 366
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/355 (51%), Positives = 244/355 (68%), Gaps = 10/355 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
TL +DL L + ++ ++ Y+IA+TP +A+LI+P +P+DPIARQ++P +
Sbjct: 11 STLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVD 70
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P ER DPIGD HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T
Sbjct: 71 ELAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R HSRVP
Sbjct: 131 LSKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVP 190
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R++ E++ LK AG ++A+HANHP E + A +A +R+ +AGI ++SQSVLL+
Sbjct: 191 VADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLR 250
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLC
Sbjct: 251 GVNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLC 310
Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350
QP Y+LD+PGGYGK + + + G G Y I D+ VH YPPK
Sbjct: 311 QPDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365
>gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5]
gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + D++++++ Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG K L
Sbjct: 74 LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ +IWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+R+P+
Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL++ L+ GK V++A+HANHP E + A AA +R+ +AGI ++SQSVLL G
Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKK----VGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGK + + + + Y ++D+ VH YPPK +
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363
>gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110]
gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110]
Length = 364
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/357 (48%), Positives = 241/357 (67%), Gaps = 11/357 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +L +L + ++ ++ Y++A+TP + LI+ +P+DPIARQF+P
Sbjct: 8 RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + P E DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG K
Sbjct: 68 ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS AA+ YI+ +IWEVI TGGDPL+LS +R+ +++ L I HV+I+R H+RVP
Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R++ E++ LK AG ++A+HANH E +E A AA +RL +AGI ++SQSVLL+
Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++ L+ ++SGLC
Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS-----------YCITDHHNIVHDYPPKS 351
QP Y++D+PGG GK + + + N + Y I D+ VH YPP++
Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364
>gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
Length = 345
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64
K L S DL A L+ E D ++ +++ Y++ALTP + L +P DP+ Q++P
Sbjct: 2 KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + PEEREDPIGD SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG G
Sbjct: 62 AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L++++ +AALAYI++ Q+WEV+ TGGDPL+LS +RL+ +++ L + HV ++R HSR+
Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P DP R+ PEL++ L +IA+H NH E + AA++RL AGI L+ Q+VLL
Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KGIND L L R V R+KPYYLHHPDLAAGTSHFR T+ EG+ +V L+ K+SGL
Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GK I++ G Y +TD VHDY
Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343
>gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15]
gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15]
Length = 345
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 5 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + +G+ + D V YPP +
Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 345
>gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
Length = 358
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 18 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 78 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + +G+ + D V YPP +
Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 358
>gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53]
gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53]
Length = 361
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/348 (50%), Positives = 245/348 (70%), Gaps = 4/348 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL S +L L EQ+ + E+++ Y++A+T +A+LI+P +PNDPIARQ+IP +
Sbjct: 12 RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I ER DPIGD HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG K +
Sbjct: 72 ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + AA+ YI+ +IWEVI TGGDPL+LS +RL++V+ L I+HV+I+RFH+RVP
Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ +P RI+ +L+ LK G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+
Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++ L+ ++SGLC
Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPP 349
QP Y+LD+PGG+GK + + V + Y + D+ H YPP
Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPP 359
>gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
Length = 344
Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 231/342 (67%), Gaps = 6/342 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +AQDL++A LI ++ + ++ Y++ALTP + +LI+P +P DPIARQ++P E
Sbjct: 5 RTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSAE 62
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL PEE DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG T
Sbjct: 63 ELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGDAT- 121
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ + + ALAY+ + +I EVI TGGDPL+L RL +L + I HV+++R HSRVP
Sbjct: 122 MTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRVP 181
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP+R+ P+L + L KPV++A+H NHP+E S A + RLA G+ LLSQ+VLLK
Sbjct: 182 VSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLLK 241
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND +L L R V R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+
Sbjct: 242 GVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGIA 301
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG GKV + + D +HDY
Sbjct: 302 QPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340
>gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
Length = 363
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/320 (53%), Positives = 222/320 (69%), Gaps = 2/320 (0%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++ + + YS+A+TP +A LI+ +P DPIARQF+P EL LP+E DPIGD+ HSP
Sbjct: 42 LRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDDAHSPAP 101
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG KG VLS + T+AAL YI QI+EV
Sbjct: 102 GLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGHRQIFEV 161
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
I TGGDPL+LS +RL V + L I HV +LR H+R P P + E + L+E+GK +
Sbjct: 162 ILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALRESGKAL 221
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
Y+A+H NH E + A AAI+RL AG LLSQ+VLLKG+NDD + L LMR V LR+K
Sbjct: 222 YVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDLVALRVK 281
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYYLHHPDLA GTSHFRL+++ G ++ + L +++G+ P Y+LD+PGG+GK + +
Sbjct: 282 PYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAPVS--DA 339
Query: 328 KKVGNGSYCITDHHNIVHDY 347
+ G G + I D VH Y
Sbjct: 340 ETDGEGGWRIADRSGRVHLY 359
>gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
Length = 364
Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L + ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS AL YI+ +IWEVI TGGDPL+LS +RL +++ L I+HV+I+R H+R
Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DP RI P L++ LK G +++A+HANHP E S + AA +RL +AGI L+SQSVL
Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + I Y + D+ H YPP
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363
>gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
Length = 385
Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +L A+L+ + + ++ Y++A+TP +A LI+P +P DPIARQF+P
Sbjct: 16 RTLRRLDELVEASLVAPDP--RLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ LPEE EDPIGD HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T
Sbjct: 74 EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + EAALAY+ ++WEV+ TGGDPL+ + +RL +++ L I HV+I+RFH+RVP
Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
I P+R+ P L+ L+ AG Y A+HANH E EA AA++RLA+AGI L+ QSVLL
Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD + L+ L R VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL
Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG+GKV + ++ G + +TD+ VH Y
Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354
>gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 343
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 16/351 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+R TL +AQDL +A LI+ +++++ Y++ LTP + +LI+P +P DPIARQ++P
Sbjct: 4 VRRHTLRTAQDLLDAGLIRDAA--AVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL EER DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG +
Sbjct: 62 SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGE 121
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
T ++ + EAALAY+ + I EVI TGGDPL+L RL +L + I HV+++R HS
Sbjct: 122 AT-MTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ DP RI P+L L KPV++A+H NHP E S A A +S LA AG+ LLSQ+V
Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND ++L +L R + R++PYYLHHPDLA GTSHFR +I+EGQ ++ L+ ++S
Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY-----CITDHHNIVHDYP 348
G+ QP Y+LD+PGG GKV VG G + + D ++ H YP
Sbjct: 301 GIAQPTYVLDIPGGAGKV--------PVGPGYWDGEEGVVIDPNDAEHSYP 343
>gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
Length = 375
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 1/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
TL +A DL A L + + + Y++A+TP + ++ + +DPIARQF+P
Sbjct: 29 STLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVA 88
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P+E DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T
Sbjct: 89 ELRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETA 148
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ E AL Y+ ++WEVI TGGDP ++S +R+ V+ L I HV+++RFH+RVP
Sbjct: 149 LTPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVP 208
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
I P+R++ E+++ LK G Y+A+H NH E + A AA+ RLA+AGI LLSQ+VLLK
Sbjct: 209 IAAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLK 268
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND E L L R VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+
Sbjct: 269 GVNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIA 328
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG GKV + + G G + + D+ +H Y
Sbjct: 329 QPTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369
>gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
Length = 348
Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL SAQD N + E I +S Y++A+T +A+ + + +DP+ RQF+P +
Sbjct: 3 KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL LPEEREDPIGD ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG K +
Sbjct: 63 ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA+ YI +IWEVI TGGDP++LS +R +++ + L I HV+I+R+H+R+P
Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P + E Q +K + K V++A+HANH EFS A A + L +AGI ++SQSVLLK
Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V L+ +SGLC
Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y++D+PGG K + +++ +G + YPP
Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345
>gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
Length = 324
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/317 (53%), Positives = 219/317 (69%), Gaps = 2/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L S DL A LI E++ E+ + Y++A+ +A I P+ +ARQF+P E
Sbjct: 6 SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LPEE DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG G L
Sbjct: 66 LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVG-PGGESL 124
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + LAYI + +IWEV+ +GGDP+ILS +RL +L L I H+ LR HSRVP+
Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+DP RI P +I L+ + KPV++ IHANHP EF+ A A ++ LA+AG+ LLSQSVLLKG
Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMRTFV RIKPYYLH D+A GT+HFR +++EG+ +VA+L+ SGLCQ
Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303
Query: 307 PFYILDLPGGYGKVKID 323
P Y+LD P G GK ID
Sbjct: 304 PTYVLDAPDGPGKRPID 320
>gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
Length = 349
Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 163/323 (50%), Positives = 227/323 (70%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T A +L A +I +Q+ + ++ +Y IAL +A LI+ +P DPI Q++P EE
Sbjct: 5 TYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEE 64
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN P E +DPIGD HSP+ GIVHRYPDR+LLK+ CPVYCRFCFRRE VG +KG L
Sbjct: 65 LNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDAL 124
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +AA AYI ++ +I+EVI TGGDP+ILS R + + L I HV+++R+HSRVP+
Sbjct: 125 SKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHSRVPV 184
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R+ PE + ++ + K V++A+HANH EF+ EA+AAI RL+ AGI L+SQSVLL+G
Sbjct: 185 AAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSVLLRG 244
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E LA+LMR F+ + IKPYYLH D A GTSHFR+ +EEGQ +V L++++SGL
Sbjct: 245 VNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLAT 304
Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329
P Y+ D+PGG K ++ +I++
Sbjct: 305 PTYVADIPGGVSKAVMNLPDIER 327
>gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/358 (50%), Positives = 240/358 (67%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS + AALAYI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+R H+R
Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DPQRI L+ LK G ++A+HANHP E + +A +RL +AGI L+SQSVL
Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK---------KVGNGS-YCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + + G + Y + D+ H YPP +
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363
>gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
Length = 341
Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 235/346 (67%), Gaps = 8/346 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + +DL A L ++ + ++ Y++A+TP +A L + +ARQF+P
Sbjct: 3 RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGL---SETCEGVARQFVPTAA 59
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL PEER DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 60 ELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVRP 119
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +AA+AY+ + +IWEVI TGGDPLILS +RL + L I HV+++RFH+RVP
Sbjct: 120 LSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRVP 179
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP ++ +++ LK +GK V++A+HANHP E + A+AA +R+ +AGI ++SQ+VLLK
Sbjct: 180 AVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLLK 239
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDP++L LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL
Sbjct: 240 GINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGLA 299
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + G + D H YPP++
Sbjct: 300 QPTYVLDIPGGHGKAPVGPAYVH---GGE--VEDPQGRRHAYPPEA 340
>gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18]
gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 368
Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 237/349 (67%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L+ +Q+ + ++ Y++A+T +A LI+P +P+DPIARQ+IP E
Sbjct: 20 TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG K L
Sbjct: 80 LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AAL YI+ +IWEVI TGGDPL+LS +RL + + L I HV+I+R HSRVP+
Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL+ L+ +G V++A+HANHP E S A AA +R+ +AGI ++SQSVLL+G
Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ L+ ++SGLCQ
Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319
Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + T + + Y +TD+ H YPP S
Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368
>gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 312
Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 163/309 (52%), Positives = 213/309 (68%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A LI + ++ ++ Y++++T +A LI P P+DPIARQF+P+ EE
Sbjct: 4 ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG + L
Sbjct: 64 LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI + +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P RI+ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR FVE RIKPYYLH DLA GT H R T+ EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303
Query: 307 PFYILDLPG 315
P Y+LD+P
Sbjct: 304 PLYVLDIPA 312
>gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 353
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/346 (46%), Positives = 233/346 (67%), Gaps = 9/346 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
++L DL A L+ + Q + ++ IA+TP +A+LI+ + DPIARQ++P
Sbjct: 13 RSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNAA 72
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL++ EER DPIGD+ SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG GT
Sbjct: 73 ELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT- 131
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS+ + + ALAY+ ++ + E+I TGGDPL+L+ RL ++ + + H+++LRFHSRVP
Sbjct: 132 LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRVP 191
Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
+ DP+R++ + LK V++++H NHP E S A A+ RLA+AG+ L+SQSVLL
Sbjct: 192 VADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVLL 251
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDDP +L L R + R++PYYLHHPDL GTSHFR ++ EGQ I+ +L+ ++SG+
Sbjct: 252 KGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSGI 311
Query: 305 CQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYP 348
QP Y+LD+PGG GKV + D + +++ +TD H YP
Sbjct: 312 AQPTYVLDIPGGAGKVPVGPDWWDGERL-----QVTDWRGRRHPYP 352
>gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
Length = 349
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/325 (48%), Positives = 214/325 (65%), Gaps = 4/325 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI +P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLIT--SPDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK 328
L P Y+LD+PGGYGKV + ++
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ 331
>gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03]
gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07]
gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22]
gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26]
gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32]
gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12]
Length = 349
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 211/319 (66%), Gaps = 4/319 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLIT--APDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKI 322
L P Y+LD+PGGYGKV +
Sbjct: 307 LAWPLYVLDIPGGYGKVPL 325
>gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
Length = 350
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/341 (46%), Positives = 208/341 (60%), Gaps = 5/341 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
LT +DL L+ Q+ ++ +++ + I +TP + I P DP+A QF+P EL
Sbjct: 9 LTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAIT--APADPVAAQFVPSAAEL 66
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
PEER DPIGD HSP G+ HRYPDR +L + C VYCRFCFRRE VG L
Sbjct: 67 ITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVGETGP--LP 124
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D AL YI + E+I TGGDPL LS +RL+ VL L I H+ LRFHSRVP+V
Sbjct: 125 EPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPVV 184
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI P L+ L+ V++ +H NH E + A AA++RL +AG+ LLSQSVLLKG+
Sbjct: 185 APERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKGV 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L +L R + R+KPYYLHH DLA GT HFR TI G+ ++A L+ +SG P
Sbjct: 245 NDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAIP 304
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGN-GSYCITDHHNIVHDY 347
Y+LD+PGG+GKV I ++ G + +TD VHDY
Sbjct: 305 TYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDY 345
>gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
Length = 340
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336
>gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus
denitrificans PD1222]
gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222]
Length = 366
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/345 (46%), Positives = 219/345 (63%), Gaps = 4/345 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L + +T+ L A L + + + +++ + I ++P + + P D IA QF+P
Sbjct: 21 LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAMG--APGDGIAAQFVP 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL I PEE DPI D SP G+ HRYPDR++L + C VYCRFCFRRE+VG ++
Sbjct: 79 DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVG-EE 137
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GT L D AAL Y+ I EVI TGGDP++LS +R+ ++ L I HV I+RFH+
Sbjct: 138 GT-LPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+V P RI+ ++ L V++ IH NH E + A AA++RLA+AGI LLSQ+V
Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+N DPE+LA+L R + R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S
Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
G C P Y+LDLPGG+GKV + ++K+ G G Y I D H+Y
Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361
>gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
Length = 345
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 220/346 (63%), Gaps = 10/346 (2%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
L + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+
Sbjct: 5 LMDRALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 59 PTLDELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSE 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341
>gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
Length = 343
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
LI ++ ++ + + +TP + I +D + QF+P + ELN+LP E DP
Sbjct: 4 GLISPADAAALRPVTETFRMRITPQMRTAIT--RADDGVGLQFVPDRRELNVLPSELTDP 61
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
IGD HSP KGI HRYPDR++ + VC VYCRFCFRRE+VG VL + D AAL Y
Sbjct: 62 IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I+ I EVI TGGDPL LS +RL ++ L I HV ++R H+RVP+V P RI PE+I
Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179
Query: 198 QCLKEAGKPVYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
L G ++ +H NHP EF EA+AA+ L AG+ LLSQSVLL+G+
Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND +L +L T + L +KPYYLHH DLA GTSH+R TI G+ ++ +L+ +ISG P
Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
Y+LD+PGG+GKV I +G + +TD + H Y
Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339
>gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
Length = 683
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 1/330 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+ +TL A L A L ++ + Y+IALTP + LI+ +P DPIARQ++
Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL LP ER DP D +P+KG+VHRYPDR LLK L CPVYCRFCFRRE+VG
Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGP- 455
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G +LS + EAAL + Q+ E I TGGDPL+LS +RL +L L I H+ I+R H
Sbjct: 456 DGGLLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P+R+ L L K +++ +HANH EFS A A++RL AG+ LL QS
Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L R + ++KPYYLH D A GT+ F + IE+G+ I+ +L+ +
Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
+GL P Y+LDLPGG GK + + G
Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEG 665
>gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029]
Length = 345
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 219/346 (63%), Gaps = 10/346 (2%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
L + + S +DL +A L + + ++E++ + I LTP + +DP +ARQF+
Sbjct: 5 LMDRAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VG++
Sbjct: 59 PTLDELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNE 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341
>gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
Length = 340
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L + +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336
>gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
Length = 359
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 217/340 (63%), Gaps = 4/340 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL S DL A L+ Q+ +++++ HY+ A+ P A+LI P+DPI RQ IP
Sbjct: 17 RTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIE--TPDDPIGRQVIPDGA 74
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E++ E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G+V
Sbjct: 75 EIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGSV 133
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ + I EV+ TGGDPL+LS +R++ +++ L + H+ +R HSRVP
Sbjct: 134 LDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRVP 193
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R++ E+ L E + +++ +H NH E + +A AAI R+ I +L QSVLL+
Sbjct: 194 VADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLLR 252
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND P+ L L+R V RI+PYYLH D A GT+ F + I EGQ+++ASL+ +++G+
Sbjct: 253 GVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGIA 312
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P Y+LD+PGG+GKV I + + +G+ T +H
Sbjct: 313 WPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIH 352
>gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
Length = 341
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66
+ + + L LI + D + ++ + I+L+P VI N+ P I +Q++P KEE
Sbjct: 4 IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L I EE DPIGD +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q +L
Sbjct: 59 LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E AL YI+E+ ++WEVI TGGDPL LS +L +L L I HV+++R H+R+P+
Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P++I+ EL++ L + K +Y+ +H N E S+ I +L+ AGI LLSQSVLLK
Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E L L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q
Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG GKV I+ + ++ I H+ DY
Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337
>gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 351
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 213/340 (62%), Gaps = 4/340 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL + +DL A L+ + ++ +++ Y+ A+ P A LI +P+DPI Q IP
Sbjct: 11 RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALIE--HPDDPIGLQVIPDPA 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ EER DPIGD+ SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G V
Sbjct: 69 ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI +GGDP++LS +R+ +++ L + HV +R H+RVP
Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP+R+ +++ L +++ IHANH E + +A AI R+ I +++QSVLL+
Sbjct: 188 VADPERVTADMMAALDTTCS-LWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND P+ L +L+R V R+KPYYLH D A GTS FR+ I EGQ+++A+L+ +++GL
Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P Y+LD+PGG+GKV I + V + D H
Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPH 346
>gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
Length = 356
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 213/336 (63%), Gaps = 5/336 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
RH TL + DL +A L + ++ + +++A+ P +LI +P+DPIARQ IP
Sbjct: 19 RH-TLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLIT--HPDDPIARQVIPD 75
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LP E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G
Sbjct: 76 ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPGGG 135
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+LS+ E AL ++++ I E+I TGGDPL+L+ +RL+ ++++L I H++ +R HSR
Sbjct: 136 -LLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP R+ EL+ + E + +++ IHANH E + A AI + + I +LSQSVL
Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND E L L+R ++ R+KPYYLHH D AAGT HF + + +GQ ++ L+ +++G
Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
L P Y+LD+P G GKV I + G+ D
Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349
>gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5]
gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 382
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 200/326 (61%), Gaps = 4/326 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ L A L+ + ++E++ Y+ A+ P A LI P+DPI Q +P
Sbjct: 26 RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLIT--RPDDPIGLQVVPDAS 83
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I P ER DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G V
Sbjct: 84 ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI TGGDPL+LS +RL +++ L + HV +R HSRVP
Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI L + E + +++ +HANH EF+ A AA+ R+ I +L QSVLL+
Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND L L R VE R+KPYYLH D A GT+ F + I EG++++A L+ +++GL
Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVG 331
P Y LD+PGGYGKV + ++ G
Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEG 347
>gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC
17025]
gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025]
Length = 340
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L S DL L+ + + + E++ + I +T + + + +ARQF+P +
Sbjct: 3 RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEE DPIGD SP+ G+ HRY DR++L + C VYCRFCFRRE+VGS+ +
Sbjct: 58 ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS D AAL YI+ + EVI TGGDPL LS +RL+ +++ L I H+ +R HSRVP
Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQR++ ++I+ L PV+I +H NH E +A AA+ RLA+ G+ LLSQSVLL+
Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND + L L R + LR+KPYYLHH DLA G HFR +I +G+ I+A L+ +I+G+
Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG+GKV + ++ G G + + D VH Y
Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336
>gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
Length = 325
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGG 316
P YILD P G
Sbjct: 301 PTYILDSPAG 310
>gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum
JF-5]
gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5]
Length = 325
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGG 316
P YILD P G
Sbjct: 301 PTYILDSPAG 310
>gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
Length = 362
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 205/327 (62%), Gaps = 6/327 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
++L S DL A LI E ++ ++ Y+IA+ P + LI + +DPI Q IP
Sbjct: 25 RSLRSLADLRRAGLIDDEA--PLQAVAAQYAIAIPPAMQALIT--DRHDPIGLQVIPDPA 80
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ P E DPIGD+ SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG G V
Sbjct: 81 EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + AL ++ QI EVI TGGDPL+LS +RL ++ L I H+ I+R HSRVP
Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP + ++ L E K +++ +H N+ E ++ A +I GI +LSQ+VLL+
Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND E L L R + LR+KPYYLH D A GT+ FR+ +EEG+ I+ +L+ +ISGL
Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN 332
P Y++D+PGGYGKV +D ++ G+
Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDGS 345
>gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
Length = 326
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 185/271 (68%), Gaps = 1/271 (0%)
Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
P+DPIA QFIP EL I E DPIGD HSPL +VHRYP+R+L K+ +C VYCRF
Sbjct: 40 PDDPIAAQFIPDARELTIAASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRF 99
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
CFR+E +G ++G L + A AY+ QI E+I +GGDPL LS+K+L++ L +R
Sbjct: 100 CFRKEHIG-RRGQALRQSEIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRD 158
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+ H++ LR HSR+P+V P RI+ L+ L E + ++ +H NH E + A AA+ RL
Sbjct: 159 LPHIRRLRIHSRIPVVQPARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLR 218
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
+G++L SQ+VLLKG+N D LANLM ++ +KPYYLHH DLA GT H+R+++ EG+
Sbjct: 219 TSGVMLYSQTVLLKGVNADAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGR 278
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
IVA+L+ ++SG+ P YI+++PGG GK+ +
Sbjct: 279 AIVAALRRRLSGIAMPTYIVEIPGGDGKIPV 309
>gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
Length = 304
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/294 (44%), Positives = 199/294 (67%), Gaps = 5/294 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
++ Y + ++ + +LIN + IARQF+P ++EL + PEE DPIGD HSP+ +V
Sbjct: 1 MTRDYPVRISKTMNDLINH---SAAIARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLV 57
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
HRY +R+L K+ VC V+CRFCFRRE++G QKG+ + A Y+++ +I EVI +
Sbjct: 58 HRYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILS 116
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDP+ LS +RL+ + L I+H++ +R H+R+PIV P++I E + L++ GK +
Sbjct: 117 GGDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYV 176
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H NH EF+ + + ++RLA + LLSQ+VLL+G+NDD +LA LM F+ RIKPYY
Sbjct: 177 LHVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYY 235
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
LHH DLA GT HFR+TI+EG+ I L++ +SG+ P YI+++PGG GK+ + T
Sbjct: 236 LHHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289
>gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 316
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 188/303 (62%), Gaps = 3/303 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I+ +P+DPI RQ +P EL LP ER DPIGD HSP+ + HRYP R LL +VC
Sbjct: 9 IDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRALLYPTYVCS 68
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+YCR CFR+E + + S E ALAY+ E +++ EVI TGGDPL LS +L+ +
Sbjct: 69 MYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLSDVQLEALR 127
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIA 225
L I+H+ +LR H+RVP+ P R+ P L+ L+ G + V + H NHP E ++A+
Sbjct: 128 SRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPRELDDDALT 187
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFR 284
A RL AG +LL+QSVLL+G+ND+ E+LA L V KPYYLHH DL G SHFR
Sbjct: 188 ACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDLTRGVSHFR 247
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
+I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I + +C + +
Sbjct: 248 TSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWCFSTWAGGL 307
Query: 345 HDY 347
H Y
Sbjct: 308 HHY 310
>gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
Length = 393
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 221/347 (63%), Gaps = 3/347 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ T A+ + +L ++E+ EI + + +A+TP A+L++P + N PI Q +
Sbjct: 22 QFRNRITTVAELTESIDLTEQEK-QEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQAV 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ILP E DP+ + SP+ GIVHRYPDR+L + H C +YCR C RR +VG +
Sbjct: 81 PSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG-E 139
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R
Sbjct: 140 EDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRIG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+V P RI EL L+ +P++I H NHP E +++++ A +RL +AGI L +QS
Sbjct: 200 TRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND +I+ +L+ V+ RI+PYYL+ DL+ G HFR +E G +++ L+ I
Sbjct: 259 VLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGYI 318
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ ++ I + + + ++ ++ YP
Sbjct: 319 SGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYP 365
>gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
Length = 343
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 208/329 (63%), Gaps = 12/329 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS ++L + L + + D + + Y + +TP LI P DPI RQ +P E
Sbjct: 10 RCITSPEEL--SGLFRSQGAD-LTCVVRRYPMRITPYYLGLIR--EPGDPIWRQCVPDPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
ELN + + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Q
Sbjct: 65 ELNDVTQS-PDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+S + ++AYI K QI +VI +GGDPL+LS RL +L LR I HV+I+R +RVP
Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P+RI +L + LK +P+Y+ H NHP E +E++ A +RLA+AGI L +QSVLLK
Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+++ LM+ + +R++PYY+H DL GT+HFR + +G ++A+L+ SGL
Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
P Y++DLPGG GKV++ + G+GS
Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFS--GDGS 326
>gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
Length = 391
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ LT +DL + ++ + N S+A+TP NLI+ NP DP+ Q
Sbjct: 30 WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E + EE D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+ S++ +V+ +GGDPL+LS ++L +L LR I HV+ +R
Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP+E +EE AA RL+ AG+ L +Q
Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+NDDP+ + L+ + +R++PYYL+ DL G SHF++ + G +I+ +L+
Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV ++ ++K+ + ++ + YP S+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378
>gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5]
Length = 198
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 157/198 (79%)
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS +RL+++++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HA
Sbjct: 1 PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH
Sbjct: 61 NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G
Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180
Query: 334 SYCITDHHNIVHDYPPKS 351
Y ++D+ H YPP
Sbjct: 181 CYSVSDYRGGEHSYPPAG 198
>gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 426
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T+ + L I KE+ + IK +A+TP A L++P NP PI RQ
Sbjct: 23 WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ++EL + + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 82 VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + ++ + A+ YI+E Q+ +V+ +GGD L++ L+ +LK LR I HV+I+R
Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+++ + + + + ++ ++ Y
Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366
>gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
Length = 421
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 197/300 (65%), Gaps = 2/300 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E+ + ++E +A+TP +LI+P++PNDP+ +Q IP EL++ PE++ DP+ ++
Sbjct: 44 EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
SP+ G+ HRYPDR+L + +C +YCR C RR G QK + E + YI++
Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ +V+ +GGD L++S K L+ +++ LR I HV+I+R SR P+V PQRI PEL+Q L +
Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+++ H NHP E + E+ A R+ANAGI L +QSVLL+GIND P I+ +L+ V
Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMMHLVHELV 281
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++R++PYY++ DL+ G SHFR + +G +I+ +L+ SG P +++D PGG GK+ +
Sbjct: 282 KMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKIPV 341
>gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
Length = 397
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 197/317 (62%), Gaps = 2/317 (0%)
Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
++A+TP NLINP +PNDPI RQ IP+ E I P+E DP+G+ P+ GIVHRYPD
Sbjct: 64 ALAITPYFFNLINPKDPNDPIRRQVIPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPD 123
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+L + C YCR+C R +V + + + E+ L YI++ S+I +V+ +GGDPL
Sbjct: 124 RVLFLVTDRCAAYCRYCTRSRLVSNAQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPL 182
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+LS K+L +L LR I HV+ +R SR+P+ PQRI P+L ++ G P++++IH NH
Sbjct: 183 LLSDKKLDYLLGELRKIPHVEFIRIGSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNH 241
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
P E S E AA RL+ AG+ + +QSVLLKG+N+D ++ +L+ + +R++PYYL+ D
Sbjct: 242 PSECSLELKAACERLSYAGVPIGNQSVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCD 301
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
L G++H R EG +I+ L+ SG P +++D PGG GK+ ++ ++ + +
Sbjct: 302 LITGSAHLRTDPREGIEIIRQLRGHTSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTL 361
Query: 336 CITDHHNIVHDYPPKSS 352
+ + ++YP K
Sbjct: 362 ILRNFQGERYEYPLKCG 378
>gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
Length = 403
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ LTS +L + E+ ++ S+A+TP NLI+ +PN PI +Q
Sbjct: 30 WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E+ + EE+ D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+ ++ +V+ +GGDPL+LS ++L+ ++ LR I HV+ +R
Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP E + E A RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+NDD E++ L+ + +R++PYYL+ DL G SHF++ + +G +I+ +L+
Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV I+ ++K+ + + YP KS+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378
>gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380]
gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 347
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 196/321 (61%), Gaps = 7/321 (2%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP-EEREDPIGDNNH 83
+ E+ + Y + +TP +LI P D I RQ +P + EL LP +E DP+ +
Sbjct: 26 MSELDAVVQRYPMRITPYYLDLIE--KPGDAIWRQCVPDRREL--LPCQEDADPLAEERL 81
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ +VHRYPDR+LL C VYCRFC R+ VG V S + + A+ Y+ Q
Sbjct: 82 SPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVGCAAMGV-SDRHLDEAIDYVARTEQ 140
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ +VI +GGDPL+L RL+ +L LR I HV+I+R SRVP+ PQRI EL L+
Sbjct: 141 VRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIRIGSRVPVTLPQRITEELCAMLRRY 200
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P+Y+ H NHP E + +A A RLA+AG+ L +Q+VLL+G+ND P ++ L++ ++
Sbjct: 201 -HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGNQTVLLRGVNDTPAVMRQLVKGLLK 259
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+R++PYYLHH DLAAGT HFR IE G IVA+L+ ISGL P Y++D PGG GK+ +
Sbjct: 260 MRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRGPISGLAVPHYVIDSPGGKGKIPLL 319
Query: 324 THNIKKVGNGSYCITDHHNIV 344
+ K+G+ + T ++
Sbjct: 320 PEYLVKLGDTALLRTPSGEMI 340
>gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
Length = 421
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 196/300 (65%), Gaps = 2/300 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E+ + ++E +A+TP +LI+P++PNDP+ +Q IP EL++ PE++ DP+ ++
Sbjct: 44 EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
SP+ G+ HRYPDR+L + +C +YCR C RR G QK + E + YI++
Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ +V+ +GGD L++S K L+ +++ LR I HV+I+R SR P+V PQRI PEL+Q L +
Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+++ H NHP E + E+ A R+ANAGI L +QSVLL+GIND P I+ +L+ V
Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMKHLVHELV 281
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++R++PYY++ DL+ G SHFR + +G +I+ +L+ SG P +++D PGG GK +
Sbjct: 282 KMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKTPV 341
>gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
Length = 397
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 207/351 (58%), Gaps = 8/351 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + Q LI E+ + + +LTP NLI+P NP+ P+ RQ
Sbjct: 29 WQLKNRLNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-- 118
IP+ EEL +P E DP G++ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 89 IPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVSG 148
Query: 119 -GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
GSQK + D + Y+++ ++I +V+ +GGDPL+LS RL+K+L+ LR I H++I
Sbjct: 149 VGSQKLEI----DDKLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEI 204
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVPI PQRI L + LK A P++I IH+NHP E + EA A+ +LA+ GI L
Sbjct: 205 IRIGTRVPIFLPQRITESLCKVLK-AYHPLWINIHSNHPKELTLEAKTALEKLADTGIPL 263
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGINDDP+ + L+ V R++PYYL+ DL GT HFR+ I G +I+ L
Sbjct: 264 GNQSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKL 323
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ +G P Y++D PGG GK+ ++ + + ++ ++ YP
Sbjct: 324 RGFTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374
>gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3]
Length = 195
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 153/195 (78%)
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +RL+ +++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HANHP
Sbjct: 1 LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL
Sbjct: 61 RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Y
Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180
Query: 337 ITDHHNIVHDYPPKS 351
++D+ H YPP
Sbjct: 181 VSDYRGGEHSYPPAG 195
>gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
Length = 419
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ + NL +E+ + ++ +A+TP A L++P NP PI Q
Sbjct: 23 WQLRNRIMNLDVLQEVVNLTDQER-EGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +ELNI EE DP+ ++ SP+KG+ HRYPDR+LL + C +YCR C RR G
Sbjct: 82 IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + LS + +A+ YI++ +I +V+ +GGDPL LS ++L+ ++ +R I+HV+I+R
Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V P RI EL LK+ P+++ H NHP E + ++ A+S LA+AGI L +Q
Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P+I+ L+ V+ R++PYY++ DL+ G SHFR T+ +G +I+ L+
Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ ++ + +G G + ++ + Y
Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366
>gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136]
Length = 406
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 196/317 (61%), Gaps = 2/317 (0%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
N ++A+TP NLI+P +P+ PI RQ IP+ EE P+E DP G+++H P+ G+VH
Sbjct: 64 GNKLAMAITPHFFNLIHPTDPDCPIRRQVIPRIEETWDDPDEMSDPCGEDSHMPVPGLVH 123
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RYPDR+L + C YCR+C R +V L + + EA Y++ +++ +V+ +G
Sbjct: 124 RYPDRVLFLVTDRCASYCRYCTRSRVVSGVGDQELHT-EFEAVFKYLEAHTEVRDVLLSG 182
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GD L+ S +L+ +LK LR I H++ LR SRVPI PQRI PEL L + P+++++
Sbjct: 183 GDALLFSDAKLEGILKRLRAIPHIEFLRIGSRVPIFLPQRITPELCTMLAKY-HPLWMSV 241
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NHP E + E A+ RLAN GI L +QSVLL+G+NDDPE++ L+ + R++PYYL
Sbjct: 242 HTNHPREITIEVKEALERLANHGIPLGNQSVLLRGVNDDPEVMKALVHKLLMSRVRPYYL 301
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
+ DL G+SH R ++ +G +I+ SL+ +G P +++D PGG GKV ++ +
Sbjct: 302 YQCDLIQGSSHLRTSVSKGLEIIESLRGHTTGYGVPQFVIDAPGGGGKVPVNPEYVLAKD 361
Query: 332 NGSYCITDHHNIVHDYP 348
+ I ++ V DYP
Sbjct: 362 SHHTLIRNYEGKVFDYP 378
>gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
Length = 340
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 186/299 (62%), Gaps = 7/299 (2%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
++E++ I + I + P +LI P DPI +Q +P EL + EDP+ + +
Sbjct: 25 DLEEMQRIHKEFPIRINPYYLSLIK--EPGDPIWKQVVPDPREL--MSTGVEDPLHEEDD 80
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
S + + HRYPDR L + ++CP+YCRFC R+ VG +S + E LAYIQ +
Sbjct: 81 SEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDPHS--ISEDNIETGLAYIQAHPE 138
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +VI +GGDPL+L+ K++ ++ LR IKH++I+R SRVP+ PQRI PEL LK
Sbjct: 139 IRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIGSRVPVTLPQRITPELCAILKRH 198
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P YI H NHP E + E A LA+AGI L +Q+VLLKG+NDDP+++ LM+ +
Sbjct: 199 -HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQAVLLKGVNDDPDVMVELMKGLLR 257
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+R+KPYY++ DL GT HFR ++ G IVA+L+ ISGL P Y++D PGG GK+ +
Sbjct: 258 IRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHISGLGVPHYVVDAPGGGGKIAL 316
>gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
Length = 354
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 197/323 (60%), Gaps = 6/323 (1%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+++K + + Y + + P LI NDPI RQ +P EL+ DP+ + HSP
Sbjct: 33 EKLKRVISRYPMRINPYYLGLIR--EKNDPIYRQSMPDIRELDD-KGAAPDPLNEEGHSP 89
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++G+ HRYPDR+LL + C VYCRFC R+ VG + +++ + E + YI+ ++
Sbjct: 90 VRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSIEEGIDYIRAHREVR 147
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+L RL ++L L I HV+I+R +RVP PQRI PEL L++
Sbjct: 148 DVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQRITPELAGLLQKF-H 206
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+Y+ +H NHP E + EA A +RLA+AGI L Q+VLLKG+NDDP ++ LMR + +R
Sbjct: 207 PLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDPSVMQELMRKLLIIR 266
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+KPYYL H D A GTSHFR ++ G I+ L+ SGLC P + +DL GG GKV +
Sbjct: 267 VKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAIDLLGGGGKVPLLPD 326
Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348
++ +GS +T++ + +P
Sbjct: 327 YLQGREDGSLLVTNYRGNAYRHP 349
>gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
Length = 398
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 213/351 (60%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ T Q + L +E+ + ++A+TP NLI+ +PN PI +Q
Sbjct: 30 WQLKNRITTLEQLEQHMELTPEERAG-CAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+++E+ + EE DP+G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+E ++ +V+ +GGDPL+LS K+L +L LR I+HV+ +R
Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP E ++ A RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLK +NDD E++ L+ V +R++PYY++ DL G++H R + +G +I+ L+
Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P +++D PGG GKV I+ I K+ + + + ++ YP K+
Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377
>gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 423
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T+ L + KE+ + I++ +A+TP A+L++P NP PI RQ
Sbjct: 23 WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAGQ 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T S + +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 142 HDRTRTKS-EIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQ + EL LK+ P++I + NHP E + E+ A LA+AGI L +Q
Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G SHFR +I G KI+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D P G GK+++ + N + + ++ ++ Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366
>gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519]
gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii]
Length = 414
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + E+ + +K + +A+TP +LI+ NPNDP+ +Q
Sbjct: 21 WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ ++EDP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 80 VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + +K +AA+ YI+ Q+ +V+ +GGD L++S ++L+ +K LR I HV+++R
Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AGI L +Q
Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SG C P +++D PGG GK + +Y I+ +HN V
Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPV---------MPNYVISQNHNKV 352
>gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum]
Length = 411
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 216/352 (61%), Gaps = 14/352 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+RH + + AN + E+++ + Y I + +LI+ +P DPI Q IP
Sbjct: 12 IRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLIS--DPQDPIGLQVIP 63
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E + + EDP+G++ SP+ IVHRYPDR+L + + CP+YCR+C R+ +VG +
Sbjct: 64 DPAEW-MDADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRLVGKPE 122
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G V+S ++ + YI+E ++ +VI +GGDPL+L + L+++L LR I+H++I+R +
Sbjct: 123 G-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEHLEIIRIGT 181
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP PQR+ PEL + L P+Y+ +H NHP E + E+ A LA+AGI L Q+V
Sbjct: 182 RVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAGIPLGCQTV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
L+KGINDD E+L L + +++R+KPYYL+ DL G +HFR +E+G I+ +L+ IS
Sbjct: 241 LMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIMKALQGNIS 300
Query: 303 GLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
G+ P +++D PGG GK+ + D + + + NG + ++ N ++ YP SS
Sbjct: 301 GMAIPHFVIDAPGGGGKIPVLADDYLLGRE-NGQVLLKNYENKIYSYPDVSS 351
>gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 423
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++
Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372
>gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
Length = 416
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 192/303 (63%), Gaps = 2/303 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + +KE +A+TP +LI+P NPN PI +Q IP +EL PE++ DP+
Sbjct: 41 LTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQAIPTHQELVRAPEDQVDPLS 100
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ SP+ G+ HRYPDR+L + C +YCR C RR G QK S+ + + YI
Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG-QKDASSPSERIDRCIDYIA 159
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ +V+ +GGD L++S +RL+ +LK LR I HV+I+R SR P+V PQRI P+L+
Sbjct: 160 NTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRIGSRTPVVLPQRITPQLVDM 219
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK+ PV++ H NHP E +EEA+ A R+ANAGI L +Q+VLL+GIND ++ L+
Sbjct: 220 LKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQTVLLRGINDCTHVMKRLVH 278
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK
Sbjct: 279 LLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 338
Query: 320 VKI 322
+ +
Sbjct: 339 IPV 341
>gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 423
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + +E+ I + +A+TP +LI+P++PNDPI ++
Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372
>gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
Length = 430
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 204/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ LT+ Q L + +E+ + ++ +A+TP +LI+ NP DP+ R
Sbjct: 75 WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P E DP+ ++ G+VHRYPDR+LL C YCR+C R +VG
Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G + E ALAYI+ + +V+ +GGDPL ++ RL+ +L LR ++HV+I+R
Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S+VP V PQR+ P L + LK+ P++I++H HP E + EA A +RLA+AG+ L SQ
Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GINDD + LM+ + LR++PYYL+ D G++HFR + +G +IVA L+
Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P Y++D PGG GKV + ++ + + + ++ + YP
Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYP 419
>gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
Length = 423
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 198/322 (61%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T L + E+ + I+ +A+TP A+L++P NP PI RQ
Sbjct: 23 WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + ++ +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQ + EL LK+ P+++ H NHP E + E+ A LA+AGI L +Q
Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYYL+ DL+ G SHFR +I G +I+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG C P Y++D P G GK+++
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRL 341
>gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2]
gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2]
Length = 435
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 200/317 (63%), Gaps = 3/317 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+++TP +LI+P++P+ P+ + +P E + E +DP+G+++ SP+ G+VHRYPDR
Sbjct: 118 LSITPYYLSLISPNDPDQPLRKSVVPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDR 177
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L LL C YCR+C R +VG G + E A+ YI + I +V+ +GGDPL
Sbjct: 178 VLFLLLDFCSTYCRYCTRSRVVG-HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLT 236
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS RL+ VL LR I HV+I+R ++V V PQRI P+L++ LK P+++++H HP
Sbjct: 237 LSDDRLEWVLSRLRKIPHVEIIRIGTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHP 295
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A + LA+AGI L SQ+VLLKGIND+ E +A+LM +++R++PYYL+ D
Sbjct: 296 DECTPEAYKACTMLADAGIPLGSQTVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDP 355
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
G+ HFR +I++G +I+ L+ SG P Y++D PGG GK+ + +K+ +
Sbjct: 356 ITGSGHFRTSIDKGLEIIHGLRGFTSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLV 415
Query: 337 ITDHHNIVHDYP-PKSS 352
+T++ + YP P SS
Sbjct: 416 LTNYEDKTFCYPDPVSS 432
>gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale]
Length = 416
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 201/322 (62%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + KE+ + + + +A+TP +LI+P++PNDP+ +Q
Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 140 QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG C P +++D PGG GK +
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340
>gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
Length = 366
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 188/305 (61%), Gaps = 5/305 (1%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+LI+ ++P DPI Q IP +EL E DPI D++ SP+ + HR+ DR+LL +
Sbjct: 59 DLIDWNDPADPIRAQVIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQ 118
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C VYCRFCFR+E + S G + + E ALAYI + S+I EVI TGGDPL LS K L +
Sbjct: 119 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAE 177
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
+ + I HV++LR H+RVP+ P RI P L++ L+ G+ V + H NH E ++ A
Sbjct: 178 IFMRIEAIPHVRLLRIHTRVPVALPSRITPGLVEALQ--GRLMVTVVTHFNHAREITDAA 235
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282
AA + AG +LL+QSVLLKG+ND E+L L R + L +KPYYLHH DLA G +H
Sbjct: 236 EAACRTMRQAGFVLLNQSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAH 295
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV + +I+ S+ I
Sbjct: 296 RRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDG 355
Query: 343 IVHDY 347
V Y
Sbjct: 356 AVRGY 360
>gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 527
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 179/286 (62%), Gaps = 1/286 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP A +PHNP P+ R +P EE ++ P E DP+G+++HSP+ G+VHRYPDR
Sbjct: 190 LAVTPYYAAQFDPHNPAHPLRRTMVPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDR 249
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L C YCR+C R VG S + AA+ YI+ ++ +V+ +GGDPL
Sbjct: 250 VLFLATDSCSAYCRYCTRSRRVGKPCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLT 309
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ L +L LR I HV+ +R ++ PIV PQRI P L++ L+ P++++IH HP
Sbjct: 310 MTDSALNHLLSQLRRIPHVEFIRIGTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHP 368
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A++RLA+ GI L SQ+VLLKGIND+ + LM+ ++ R++PYYL+H D
Sbjct: 369 DELTPEASQALNRLADGGIPLGSQTVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDP 428
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G++HFR I +G +I+ ++ +G P Y++D PGG GK+ +
Sbjct: 429 VQGSAHFRTPIYKGVEIIRGMRGFTTGYAVPTYVVDAPGGGGKIPL 474
>gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
Length = 418
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 197/315 (62%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + DL + E+ + ++E +A+TP +LI+P++PNDP+ +Q +P EL
Sbjct: 29 IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQSVPTANEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
I E++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G QK
Sbjct: 89 IISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASP 147
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + A+ YI+ ++ +V+ +GGD L++S ++ +L+ LR I HV+I+RF SR P+V
Sbjct: 148 RERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRFGSRTPVV 207
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL++ LK+ P+++ H NHP E + E+ A RLANAG+ L +Q+VLL+GI
Sbjct: 208 LPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQTVLLRGI 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P
Sbjct: 267 NDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGHTSGYAVP 326
Query: 308 FYILDLPGGYGKVKI 322
+++D PGG GK+ +
Sbjct: 327 TFVVDAPGGGGKIPV 341
>gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
Length = 448
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 206/323 (63%), Gaps = 5/323 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ H+ +T+ + L + +E+ I++ + + + +TP A LI+P +P+ P+ Q
Sbjct: 29 WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EL E DP+ ++ SP+ GI HRYPDR+L + H C +YCR C RR +VG
Sbjct: 88 VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ +S+ + A+AYI+ +I +V+ +GGDPL + +RL+ V+K LR I HV+I+R
Sbjct: 148 QEA--MSTAMLDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLS 239
+R+P+V PQRI PEL+ L++ P+++ H NHP+E +A A+ RLA+AGI +
Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKG+ND ++ L+ V++R +PYY+++ DL+ G SHFR ++ +G I+ +L+
Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
SG C P +++D PGG GK+ +
Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPV 347
>gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter
uraniireducens Rf4]
gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4]
Length = 347
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 208/348 (59%), Gaps = 13/348 (3%)
Query: 8 LTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+ Q++ A++ EQ+ + + + Y + +TP NLIN P DP+ RQ
Sbjct: 1 MGKWQNILAASITSPEQLARRFGIDAEPLLRVVQRYPMRITPYYLNLIN--EPGDPLWRQ 58
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL ++EDP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 59 CVPDARELED-DLQQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
G V AAL YI + +I +VI +GGDPL+L L+++L LR I H++I+R
Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+ P+RI L + LK P+YI H NHP E + E+ A +RLA+AGI L +
Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+ND+P ++ LM+ +++R+KPYY+H DL GT HFR +E+G +I+ SL+
Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P+Y++DL GG GKV + +K+VG + ++ + +Y
Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343
>gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
Length = 344
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 190/315 (60%), Gaps = 10/315 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++L + + Q + Y + +TP LI P DPI RQ +P EL
Sbjct: 12 ITSPEELSG---LFRLQGGAFSPVVERYPMRITPYYLGLIE--EPGDPIWRQCVPDPAEL 66
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ L + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++
Sbjct: 67 DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A+AYI +I +V+ +GGDPL+L RL +L L I HV+I+R +R P+
Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI P L + LK + PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GKV +
Sbjct: 302 HYVIDLPGGKGKVDV 316
>gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
Length = 422
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 197/311 (63%), Gaps = 9/311 (2%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP A+L++P NP PI RQ +P +EL + DP+ ++ SP+ G+ HRYPDR
Sbjct: 59 MAITPYYASLMDPDNPKCPIRRQAVPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDR 118
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L+ + +C +YCR C RR G Q + ++ +A + Y++E Q+ +V+ +GGD L+
Sbjct: 119 VLMLVTDMCSMYCRHCTRRRFAG-QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLL 177
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + L+ +LK LR IKHV+I+R +R P+V PQ I PEL LK+ P++I H NHP
Sbjct: 178 VGIEMLEYILKELRKIKHVEIIRIGTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHP 236
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + E+ A LA+AGI L +QSVLL+GIND P I+ L+ V++R++PYY++ DL
Sbjct: 237 KEITPESSRACEMLADAGIPLGNQSVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDL 296
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
+ G +HFR ++++G +I+ +L SG C P++++D P G GK+++ + N
Sbjct: 297 SQGLTHFRTSVKKGLEIMEALIGHTSGFCVPWFVVDAPAGGGKIRV-------MPNYVIS 349
Query: 337 ITDHHNIVHDY 347
++DH I+ +Y
Sbjct: 350 MSDHTVILRNY 360
>gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
Length = 417
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 206/340 (60%), Gaps = 2/340 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ +P EL
Sbjct: 29 IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRAVPTIHEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
PE+ DP+ ++ SP+ G+ HRYPDR+L+ + C +YCR C RR G +
Sbjct: 89 YQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAGETDAPMPM 148
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K E + YI+ QI +V+ +GGDPL LS RL++++K LR I HV+I+R S VP+V
Sbjct: 149 DK-IEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRIGSSVPVV 207
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q+VLL+G+
Sbjct: 208 LPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQTVLLRGV 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ L+ SG C P
Sbjct: 267 NDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGHTSGYCVP 326
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 327 TFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366
>gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 454
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 193/327 (59%), Gaps = 4/327 (1%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E++ E+ + +TP +L++ P P+ R +P E LP E DP+G+
Sbjct: 111 EEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTVVPTVHEFFKLPGEENDPLGEEG 170
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEK 141
H+ + G+VHRYPDR+LL + C YCR+C R +VG +G + S+ E A+ YI+
Sbjct: 171 HTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVG--RGKIYPSRSRLEKAIDYIRNT 228
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
I +V+ +GGDPL LS +L +L +R I HV+I+R ++VP V PQR+ PEL++ L+
Sbjct: 229 PTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRIGTKVPAVLPQRVTPELVRVLR 288
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P+++++H HP E + EA A + LA+AGI L SQ+VLLKGINDD + LM
Sbjct: 289 KY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQTVLLKGINDDVATMKALMHQM 347
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
+ +R+KPYYL+ D AG+ HFR ++ G +I+ L+ SG P Y++D PGG GK+
Sbjct: 348 MRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGHTSGYAVPTYVIDAPGGGGKIP 407
Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ + + + + ++ N + YP
Sbjct: 408 LLPNYVVSSSDAGVVLENYENRLFTYP 434
>gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 407
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 204/324 (62%), Gaps = 9/324 (2%)
Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
QL+++ +S ++L N + + EQI+E+ + Y A++P +LI+P NPN PI +
Sbjct: 63 WQLKNRVASSKILKELLNLDEKEAEQIEEV---AKSYRFAISPYYLSLIDPDNPNCPIKK 119
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL + + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLI 177
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T S D A+ Y+ + I +V+ TGGD L+LS + L +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEII 236
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLG 295
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ SG+ P YI++ P G GK I
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379
>gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1]
gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 492
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 180/288 (62%), Gaps = 2/288 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +TP A+L++P +P P+ RQ IP +EEL ED + ++ HSP+ G+VHRYP
Sbjct: 81 FRLDITPYFASLMDPEDPTCPVRRQVIPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYP 140
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+L+ + C YCR+C R +VG T + + EA L Y++ Q+ +V+ +GGDP
Sbjct: 141 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 199
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L+ K L ++L LR I+H++I+R +RVP+ P R+ EL L E P+++ IH N
Sbjct: 200 LTLAPKVLGRLLSELRKIEHIEIIRIGTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVN 258
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + E A RL AG+ L +QSVLL+G+ND P I+ L+R V++R++PYY++
Sbjct: 259 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQC 318
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ +
Sbjct: 319 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 366
>gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 418
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ +T+ + L + +++ + +K + +A+TP +LI+ + +DP+ +Q
Sbjct: 23 WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL+I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G
Sbjct: 82 IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q T + + +A + YI+ ++ +V+ +GGD L++S+++L+ ++ LR I+HV+I+R
Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E ++E+ A +RLA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL G+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK + + + G + ++ ++ Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366
>gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
Length = 493
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 178/288 (61%), Gaps = 2/288 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP
Sbjct: 73 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYP 132
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+L+ + C YCR+C R +VG T + + EA L Y++ Q+ +V+ +GGDP
Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 191
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L+ K L ++L LR I+H++I+R +RVP+ P R+ EL L E PV++ IH N
Sbjct: 192 LTLAPKVLGRLLAELRKIEHIEIVRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 250
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + E A RL AG+ L +QSVLL+GIND P I+ L+R V++R++PYY++
Sbjct: 251 HPREITPEVAEACDRLTRAGVPLGNQSVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQC 310
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ +
Sbjct: 311 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358
>gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 407
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 209/335 (62%), Gaps = 9/335 (2%)
Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
QL+++ L++ ++L N N + +QI+E+ ++ Y A++P LI+P +PN PI +
Sbjct: 63 WQLKNRVLSAKTLKELLNLNEKETQQIEEVAKV---YRFAISPYYLLLIDPDDPNCPIKK 119
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEII 236
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLG 295
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
+ SG+ P YI++ P G GK I + G G
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390
>gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
Length = 375
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 203/347 (58%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+RH+ LT + + E+ + +++A+TP A+L++P + N P+ Q
Sbjct: 28 WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+KEEL + + DP G++N SP+ GIVHRYPDR+LL L C YCR+C R +V
Sbjct: 87 IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLVSQ 146
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T + + +A + Y+++ +++ +V+ +GGDPL++S++ L +L LR I H++ +R
Sbjct: 147 GEMTPIKHR-LDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP PQRI PEL++ L++ V++++H H E + E A LA+ GI L Q
Sbjct: 206 GSRVPCFLPQRITPELVKVLRK--HRVWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND + L NL ++LR++PYYL+ D GTSH R +I+ G +++ L+
Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GKV I + NG + + + Y
Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370
>gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 407
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 208/333 (62%), Gaps = 5/333 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ L SA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q
Sbjct: 63 WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-PPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ +L+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
SG+ P YI++ P G GK I + G G
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390
>gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 415
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+
Sbjct: 87 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI
Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + +
Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L
Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK
Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384
Query: 320 VKID 323
+ ++
Sbjct: 385 IPVN 388
>gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 415
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+
Sbjct: 87 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI
Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + +
Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L
Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK
Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384
Query: 320 VKID 323
+ ++
Sbjct: 385 IPVN 388
>gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 416
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 192/305 (62%), Gaps = 3/305 (0%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
NL KE+ + I++ +A+TP A+L++ +P+ PI RQ +P ELN + EDP
Sbjct: 38 NLTDKEE-EGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQAVPSSLELNFGDSDLEDP 96
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ SP++GI HRYPDR+L + C +YCR C RR + G+ + + A+ Y
Sbjct: 97 LSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGTTDKAA-PKEVVDNAIEY 155
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I+ ++ +V+ +GGD LI+S +RL+ +L L I+HV+I+R +R P+V PQRI +L+
Sbjct: 156 IKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRIGTRAPVVLPQRITDDLV 215
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
LK+ PV++ H NHP E + EA A+++LA+AGI L +QSVLLKGIND P + NL
Sbjct: 216 SILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQSVLLKGINDCPGTMKNL 274
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ V+ R++PYY++ DL+ G HFR ++ G +IV L+ SG P Y++D PGG
Sbjct: 275 VHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGHTSGFAVPTYVVDAPGGG 334
Query: 318 GKVKI 322
GK+ +
Sbjct: 335 GKIPV 339
>gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 425
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 197/332 (59%), Gaps = 1/332 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ D IK ++ +++TP A+L++ NP P+ R +P + EL E EDP+G
Sbjct: 85 LSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAVVPVRAELCRSFGEAEDPLG 144
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ SP+ GIVHRYPDR+L + C YCR+C R MVG + + E AL YI+
Sbjct: 145 EDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGRSSACHGGTSNWEKALNYIE 204
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ I +V+ +GGDPL L+ L+ +L L I+H++I+R ++VP+V PQRI L +
Sbjct: 205 ANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRIGTKVPVVLPQRITSRLARM 264
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK P++I IH HP E + E A +RLA+AGI L SQ+VLLKGINDD + + L
Sbjct: 265 LKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQTVLLKGINDDVDTMKELYH 323
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+++R++PYYL+ D G+ HFR ++++G +I+ L+ SGL P +++D PGG GK
Sbjct: 324 RLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGHTSGLAVPNFVIDAPGGGGK 383
Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+ + + + ++ +++ YP S
Sbjct: 384 IPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415
>gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 430
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 192/327 (58%), Gaps = 3/327 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+ + +TS QDL + L E +A+TP +L + P++ + R
Sbjct: 73 WQLKSR-ITSYQDL-GSMLALSEAEQAAANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P E EDP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG
Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + K +AA+ YI + +V+ +GGDPL +S L +L +R I HV+++R
Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++ P+V PQRI P+L + L+ P+ I++H HP E S E+ A RLA+AGI L SQ
Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGINDD L +LM ++ R++PYYL+H D GT HFR ++ +G +++ L+
Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNI 327
SG P +++D PGG GK+ ++ I
Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYI 396
>gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate)
Length = 416
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 196/322 (60%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + KE+ + + + A+TP +LI+P++PNDP+ +Q
Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + C YCR C RR G
Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAG- 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 140 QSDDSXPXERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG C P +++D PGG GK +
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340
>gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
Length = 440
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 204/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH + L + + L + L EQ E + ++ TP +LIN + NDP+
Sbjct: 28 WQMRHSIRDLDTFERLLDITL-SDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ + +A + YI+ Q+ +V+ +GGDP +LS + L +L LR I+HV+I
Sbjct: 147 VGDED-TIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI PEL+ L + +PV++ H NHP E ++ A A++RLA+ G+ L
Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374
>gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
owensensis OL]
gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
owensensis OL]
Length = 407
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 210/333 (63%), Gaps = 5/333 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q
Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQ+I EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
SG+ P YI++ P G GK I + + G G
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKG 390
>gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 360
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 195/324 (60%), Gaps = 10/324 (3%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL--NILPEEREDPIGDNNHSP 85
+K ++ Y + + P +LIN P DPI RQ +P EL + P DP+G+ ++SP
Sbjct: 41 LKAVTARYPLRINPYYLSLIN--QPGDPIWRQAVPDVRELEDTVCPA---DPLGEEDYSP 95
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQI 144
+ G+VH+Y DR LL + C +YCRFC R+ VG+++ S+ +AALAY+++ I
Sbjct: 96 VPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVGTREMAAAGSAAQLDAALAYLEQTPAI 155
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ +GGDPL+L RL +L LR I+H++I+R SRVP PQR+ +L LK+
Sbjct: 156 HDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEIIRLGSRVPCTLPQRVTLKLAAALKKF- 214
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
P++I H NHP E + EA A RLA+AGI L +Q+VLLKG+NDD + LMR +++
Sbjct: 215 HPLFINTHFNHPREITPEAARACQRLADAGIPLGNQTVLLKGVNDDAATIRELMRGLLKI 274
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
R+KPYYL DL+ GT HFR +E+G I+ L SGL P + LD P G GK+ +
Sbjct: 275 RVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTFALDAPEGRGKIPLTP 334
Query: 325 HNIKKVGNGSYCITDHHNIVHDYP 348
++ +G+ T++ + YP
Sbjct: 335 DYLQSLGD-KLIFTNYQGLPCQYP 357
>gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
Length = 415
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 200/321 (62%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++++ T AQ L ++ E+ K+ + + +A+TP +LI+ NP DPI Q I
Sbjct: 22 QIKNRITTHAQ-LSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQAI 80
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ E +I P + DP+ ++ +P+ G+ HRYPDR+LL L C +YCR C RR G
Sbjct: 81 PRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAGEH 140
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ E AL YI+E ++ +VI +GGDPL LS +RL +L L I+H++I+R
Sbjct: 141 DAP-MPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRLG 199
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQR L+ L++ K V++ H NHP E E++ A++++A GI + +QS
Sbjct: 200 TRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQS 258
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+ +++ L+ V+ R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 259 VLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGHT 318
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SGLC P Y++D PGG GK+ +
Sbjct: 319 SGLCVPTYVVDAPGGGGKIPV 339
>gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265]
gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265]
Length = 441
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 197/329 (59%), Gaps = 3/329 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78
+ EQ + + + + +++TP +LIN + NDP+ Q +P EL+ILP + DP+
Sbjct: 48 LSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVFLQSVPSPRELHILPGDMADPL 107
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
++ SP + HRYPDR+LL + + CP+YCR C R+ VG Q T+ S A + YI
Sbjct: 108 HEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKVGDQD-TIPSRAAISAGIEYI 166
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
++ ++ +V+ +GGDP +LS + L +L LR I HV+I+R +R P+V PQRI PEL+
Sbjct: 167 RQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEIIRIGTRTPVVLPQRITPELVA 226
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ +PV++ H NHP E ++ + A++ LA+ G+ L +Q+VLL GIND P I+ L+
Sbjct: 227 MLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPLGNQTVLLSGINDCPRIMKALV 285
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
V R++PYYL+ DL+ G SHFR + +G +I+ SL SG P Y++D PGG G
Sbjct: 286 HKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFSVPTYVIDAPGGGG 345
Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
K+ + + + + ++ ++ Y
Sbjct: 346 KIPVMPNYLISWSTNKVVLRNYEGVITTY 374
>gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
Length = 413
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 189/303 (62%), Gaps = 2/303 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + I+E +A+TP LI+P NP+ PI +Q IP EEL P + EDP+
Sbjct: 39 LTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQAIPTVEELKRSPADLEDPLH 98
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+++ SP+ G+ HRYPDR+L + +C +YCR C RR G Q K + + YI
Sbjct: 99 EDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QHDCATPEKQIDDCIDYIA 157
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
Q+ +V+ +GGD L++S ++L+ ++ LR I HV+I+R SR P+V PQRI PEL+
Sbjct: 158 RTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRIGSRTPVVLPQRITPELVNM 217
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK+ P+++ H NHP E + E+ A +RLA+AGI L +QSVLL+G+ND I+ L+
Sbjct: 218 LKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQSVLLRGVNDCTHIMKKLVH 276
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK
Sbjct: 277 ELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 336
Query: 320 VKI 322
+ +
Sbjct: 337 IPV 339
>gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
Length = 341
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 195/326 (59%), Gaps = 10/326 (3%)
Query: 12 QDLYNANLIKKEQIDE--IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
Q + A L + + DE +K +++ Y ++ A LI P+DPI +Q +P EL +
Sbjct: 4 QTVSLAELAHRFKFDETPLKPVADLYPYRISSYYAGLIT--APHDPIWQQCVPSLLEL-V 60
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
E+ DP+ + SP+ G++HRYPDR +L + + C YCRFC R+ VG G S
Sbjct: 61 DTEQHPDPLDEERLSPVPGLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPALS- 119
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
AAL YI Q+ ++I +GGDPL+LS L ++L LR I HV+++R SR+P+ P
Sbjct: 120 ---AALEYIAATPQLRDIILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAP 176
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
RI P + L E P+Y+ H NHP E + EA A LA+ G+ L +Q+VLLKG+ND
Sbjct: 177 ARITPAFCRMLAEH-HPLYLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVND 235
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D + L+ + L+++PYYLH DL GT+HFR +E G++++ +L+ KISG+ P +
Sbjct: 236 DSPTMQALLTGLLRLQVRPYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHF 295
Query: 310 ILDLPGGYGKVKIDTHNIKKVGNGSY 335
++DLPGG GKV + ++ +VG +
Sbjct: 296 VIDLPGGKGKVPVLPDSLTRVGEAVW 321
>gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380]
gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 457
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 193/314 (61%), Gaps = 3/314 (0%)
Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ +++TP A+LI+P + NDP+ Q P EL + P E DP+ ++ SP+ GI HRY
Sbjct: 84 FPLSITPYYASLIDPEDYQNDPVFIQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRY 143
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
PDR+L + ++C +YCR C R+ VG Q ++ ++ + L YI E QI +V+ +GGD
Sbjct: 144 PDRVLFHVSNLCAMYCRHCTRKRKVGDQD-SIPGREEIKQGLEYIAENPQIRDVLLSGGD 202
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS + L +L LR I HVQ++R +R+P+V P RI +L+ L++ PV++ H
Sbjct: 203 PLMLSDEYLDWILTALRNIPHVQVIRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHF 261
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + A AA+ +LA+AGI L +Q+VLL G+ND P I+ LM V+ R++PYYL+
Sbjct: 262 NHPRELTSSARAALRKLADAGIPLGNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQ 321
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
DL+ G HFR + +G +I+ SL SG P Y++D PGG GK+ ++ + + +
Sbjct: 322 CDLSEGLMHFRTPVGKGIEIMESLIGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTN 381
Query: 334 SYCITDHHNIVHDY 347
+ ++ ++ Y
Sbjct: 382 KVILRNYEGVITTY 395
>gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 375
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 181/304 (59%), Gaps = 2/304 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+
Sbjct: 47 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 106
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI
Sbjct: 107 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 165
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ +I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + +
Sbjct: 166 QHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 225
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L
Sbjct: 226 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 284
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK
Sbjct: 285 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 344
Query: 320 VKID 323
+ ++
Sbjct: 345 IPVN 348
>gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 423
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 202/346 (58%), Gaps = 3/346 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ LT+ ++L + + + + + +A+TP A L+NP + N PI Q I
Sbjct: 24 QLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQAI 82
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL E EDP+ ++ SP G+ HRYPDR+LL + C +YCR C RR M G+
Sbjct: 83 PTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGTN 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L D + AL YI+ I +V+ +GGD L++S L +L LR I+HV+I+R
Sbjct: 143 D-QALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRIG 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R P+V PQR+ PEL LK+ P++I H NHP E ++EA A+S LA+AGI L +QS
Sbjct: 202 TRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQS 260
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+GIND P + L + + RI+PYYL+ DL+ G HFR ++ +G +I+ L+
Sbjct: 261 VLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGHT 320
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 321 SGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366
>gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 358
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 191/320 (59%), Gaps = 5/320 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
+ Y +++ P +LI P DP+ RQ +P EL+ + +DP+ + SP+ G++
Sbjct: 44 VCRAYPMSVNPYYLSLI--QAPGDPLWRQVVPDARELSGTLTD-DDPLTETAQSPVPGLI 100
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
HRYPDR+++ + CPV CRFCFR+ + G + L+ +AA AY++ + EVIF+
Sbjct: 101 HRYPDRVVVLVSGRCPVVCRFCFRKRLAGRAAAS-LTDDQVDAAAAYVRAAPAVREVIFS 159
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+L +L L+ I HV+ LR H+R P+ PQRI +L+ LK+ P+Y+
Sbjct: 160 GGDPLMLEDDKLCAALEKFAAIGHVETLRIHTRTPVALPQRITGDLVVLLKKF-LPLYVN 218
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H NHP E + A AA +RLA+AGI L SQ+VLL GINDD + LMR + +R++PYY
Sbjct: 219 VHVNHPREITAPAEAACARLADAGIPLGSQTVLLAGINDDAITMEALMRALLRIRVRPYY 278
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
LHHPD+ GT HFR I G ++ SL ++ G+ P Y++DLPGG GKV + +
Sbjct: 279 LHHPDVVKGTGHFRPPINRGLSVMRSLVGRVPGMAVPRYVIDLPGGGGKVPLLPDYVVSS 338
Query: 331 GNGSYCITDHHNIVHDYPPK 350
G + ++ V YP K
Sbjct: 339 ETGHLVVKNYQGKVFVYPEK 358
>gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
Length = 344
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 188/315 (59%), Gaps = 10/315 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++L + + Q + + Y + +TP LI DPI RQ +P EL
Sbjct: 12 ITSPEELSG---LFRLQGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++
Sbjct: 67 -CDPSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A+AYI +I +V+ +GGDPL+L L +L L I HV+I+R SRVP+
Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI P L + LK PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GKV +
Sbjct: 302 HYVIDLPGGKGKVDV 316
>gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 409
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 208/325 (64%), Gaps = 11/325 (3%)
Query: 1 MQLRHKTLTSAQ---DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIA 57
QL+++ +TSA+ DL N + + +QI+++ +I Y A++P +LI+P++PN PI
Sbjct: 63 WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIK 118
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR
Sbjct: 119 RQSVPSSLEL--VEKGDLDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRF 176
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I
Sbjct: 177 IG-ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEI 235
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+ PQRI +L+ LK+ P+YI H NHP E ++E+ A LA++GI L
Sbjct: 236 IRIGTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPL 294
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL
Sbjct: 295 GNQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESL 354
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
+ + SG+ P YI++ P G GK I
Sbjct: 355 RGRTSGMAVPTYIINAPKGKGKTPI 379
>gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 421
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 4/322 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ +T+ DL + + + +K + ++TP +LI+P++P + R
Sbjct: 70 WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EE + E DP+ + + + ++G+VHRYPDR+L C YCR+C R MVG
Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T K E A+ YI+E +++ +V+ +GGDPL LS + + +L + I HV+++R
Sbjct: 189 H--TEALQKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++VP+V PQRIN L+ L++ KP+Y++IHA HP E ++E++ A + LA++G++L SQ
Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND +L +L + R+KPYYL D +G+ HFR T+++G+ ++ L+
Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG P Y++D PGG GKV I
Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPI 387
>gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 440
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QLRH + + + + L E+ E++E + + +++TP +LI+ N DP+
Sbjct: 29 WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P +EL + E EDP+ ++ SP+ GI HRYPDR+L ++ ++C +YCR C R+
Sbjct: 88 RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + L YI+ + +V+ +GGDPL+L L +L+ LR I HVQ+
Sbjct: 148 VGDVD-SIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI P LI+ L P+++ H NHP E + A A+SRLANAGI L
Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P I+ LM+ VE R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375
>gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 422
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 188/303 (62%), Gaps = 2/303 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I +E+ + E +++TP A L++P+N PI RQ +P +EL I + DP+
Sbjct: 41 ITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQAVPTDKELKIDKWDMIDPLH 100
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ SP+ G+ HRYPDR+L + C +YCR C RR G Q + K+ + A+ YI+
Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG-QLDRARTRKEIDDAIEYIR 159
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E ++ +V+ +GGD L++ L+ +L LR I HV+I+R +R P+V PQR+ PEL++
Sbjct: 160 ETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRIGTRTPVVLPQRVTPELVKM 219
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+++ PV+I H NHP E + ++ A LA+ GI L +QSVLL+G+ND P I+ L+
Sbjct: 220 IRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQSVLLRGVNDSPYIMMELVH 278
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
V++R++PYY++ DL+ G HFR +I +G I+ SL SGLC P +++D PGG GK
Sbjct: 279 QLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGNTSGLCVPTFVVDAPGGGGK 338
Query: 320 VKI 322
+++
Sbjct: 339 IRV 341
>gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
Length = 412
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 189/313 (60%), Gaps = 2/313 (0%)
Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
++A+TP NLI+P + N PI Q IP+ +E + E +DP G+++HSP+ G+VHRYPD
Sbjct: 81 ALAITPYFFNLIDPADENCPIRTQVIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPD 140
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+L + C YCR+C R +V + G + E + YI++ + +V+ +GGDPL
Sbjct: 141 RVLFLVTDRCASYCRYCTRSRLVSNAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPL 199
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+LS +L+ +L LR I HV+ LR +R+PI PQRI P L LK+ P++I+IH NH
Sbjct: 200 LLSDDKLEYLLSQLRAIPHVEFLRIGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNH 258
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
P E + E A+ RLA AGI L +QSVLL+ +NDD + L++ + R+KPYYL+ D
Sbjct: 259 PRELTTEVREALGRLAEAGIPLGNQSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCD 318
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
L AG++H R ++ +G +I+ L+ +G P Y++D PGG GKV ++ +
Sbjct: 319 LIAGSAHLRSSVRKGLEIMEGLRGHTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRV 378
Query: 336 CITDHHNIVHDYP 348
I + + +YP
Sbjct: 379 VIRNFEGKIFEYP 391
>gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
Length = 425
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 5/344 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R T+T + + N + E+I I++ +A+TP L+NP +P PI +Q +P
Sbjct: 29 RITTITQLEQVVNLTV---EEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQAVPT 85
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E I + DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G+
Sbjct: 86 INETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAGNDDK 145
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS + A+ YI+ QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R +R
Sbjct: 146 E-LSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRIGTR 204
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+V PQRI PEL LK+ P++I NHP E + EAI A L++AGI L +QSVL
Sbjct: 205 VPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQSVL 263
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L IND P I+ NL++ V+ R++PYYL+ DL+ G HFR + G +I+ L+ SG
Sbjct: 264 LSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGHTSG 323
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P +++D PGG GK+ ++ + N + + ++ Y
Sbjct: 324 FAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367
>gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 437
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 3/322 (0%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+I++ + + +++TP +LIN + NDP+ RQ P EEL +L + DP+ ++ SP
Sbjct: 57 KIEQTVDTFPLSITPYYLSLINTDDYANDPVFRQAFPVPEELQVLDHDMADPLAEDQDSP 116
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI HRYPDR+L + ++C +YCR C R+ VG Q TV ++ EA L YI+ +
Sbjct: 117 APGITHRYPDRVLFHISNICSMYCRHCTRKRKVGDQD-TVPGREEIEAGLEYIRNNPVVR 175
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+LS L +L L I+HVQ++R +R+P+V P RI +L+ LK+
Sbjct: 176 DVLLSGGDPLMLSDDHLDWILTELDQIEHVQVVRLGTRMPVVLPYRITDDLVAVLKKH-H 234
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+++ H NHP E + + A+ +LA+AGI L +QSVLL G+ND P I+ L+ V R
Sbjct: 235 PIWVNTHFNHPREMTTSSKEAVRKLADAGIPLGNQSVLLAGVNDCPRIMKALVHKLVANR 294
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYYL+ DL+ G +HFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ +
Sbjct: 295 VRPYYLYQCDLSEGLNHFRTPVGKGIEIMESLRGHTSGFSVPTYVVDAPGGGGKIPLNPN 354
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
+ + + ++ ++ Y
Sbjct: 355 YLVSLSTNKVVLRNYEGVITTY 376
>gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 407
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q
Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+Y+ H NHP E ++E+ A LA+ GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G G + V +
Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403
>gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
Length = 347
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 16/321 (4%)
Query: 6 KTLTSAQD----LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
KT +A D L+N + ++I +++ Y + +T LI P D I RQ I
Sbjct: 9 KTCVTAPDELSPLFNLD------TEDIAQVAKRYPMRITRYYLGLIE--RPGDAIWRQCI 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + EDP+ + SP+ G++HRYPDR++ + VC VYCRFC R+ VG
Sbjct: 61 PDPLEFED-QAQMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVGCT 119
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ T ++ +A LAYI +I +VI +GGDP +L L+++L LR I HV+I+R
Sbjct: 120 EATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIRIG 177
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R + P+RI L + LK+ P+Y+ H NHP E + + A +RLA+AGI L +Q+
Sbjct: 178 TRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGNQT 236
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGINDDP+++ LM+ +++R+KPYYLH DL GT+HFR +I+ G +I+ L+
Sbjct: 237 VLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRGHT 296
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SGL P+Y +DL GG GKV +
Sbjct: 297 SGLASPYYAIDLEGGKGKVPL 317
>gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 407
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 207/324 (63%), Gaps = 9/324 (2%)
Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
QL+++ ++ +DL N + + +QI+++ +I Y A++P +LI+P++PN PI +
Sbjct: 63 WQLKNRIASAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIKK 119
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEII 236
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+ PQRI EL+ LK+ P+YI H NHP E ++++ A L++AG+ L
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLG 295
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ SG+ P YI++ P G GK I
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379
>gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 413
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 177/294 (60%), Gaps = 2/294 (0%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E + + +TP A L++P +P+ PI Q +P EL I P + EDP+ + P+ GI
Sbjct: 95 ESDAEFHMGITPYYAALMDPDDPSCPIRLQSVPTMGELTIAPADLEDPLAEERDMPVPGI 154
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI +I +V+
Sbjct: 155 THRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYISAHPEIRDVVI 213
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL LS +RL +L LR I HV+I R +R + PQR+ + + L+ PVY+
Sbjct: 214 SGGDPLSLSDERLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVHMLRRH-HPVYV 272
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E + EA A RLA+AG ++ +Q VLLKG+ND+PE++ L + +RI+PY
Sbjct: 273 NTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDEPELVKELNHKLLLMRIRPY 332
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
Y++ DLA G SHFR +E G +I+ L+ SGL P +++D P G GK+ ++
Sbjct: 333 YIYQCDLAKGISHFRTPVETGIRIIEHLRGHTSGLAVPHFVVDAPQGGGKIPVN 386
>gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
Length = 437
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+R+ + L + + L N L +Q + E + +++TP +LIN + NDP+
Sbjct: 28 WQMRNSIRDLDTFETLLNITL-SPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ +P EL+I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q T+ + + YI+ I +V+ +GGDP +L L +L+ LR I+HV+I
Sbjct: 147 VGDQD-TIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI PEL+Q L++ +PV++ H NH E ++ A A+S LA+ GI L
Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
SG C P Y++D PGG GK+ +
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPV 349
>gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 420
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 195/315 (61%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T+ +L N + E+ ++ +A+TP A+L++P NP DPI +Q +P EL
Sbjct: 30 VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQAVPLAAEL 89
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
E DP+ + SP+ GI HRYPDR+LL L C +YCR C RR + G + L
Sbjct: 90 QFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG-KTDRALP 148
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+AAL YI++ + I +V+ +GGD L+L+ RL +L++LR I HV+I+R +R P+V
Sbjct: 149 PARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRIGTRTPVV 208
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL L+ PVY+ +H NHP E + EA A LA+AG+ L +Q+VLL+G+
Sbjct: 209 LPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQTVLLRGV 267
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND P ++ +LM + + +R++PYYL+ DL+ G HFR T+ +G +I+ L+ SGL P
Sbjct: 268 NDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGHTSGLAVP 327
Query: 308 FYILDLPGGYGKVKI 322
Y++D PGG GK+ +
Sbjct: 328 TYVVDAPGGGGKIPV 342
>gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 359
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 206/348 (59%), Gaps = 15/348 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L ++T ++L + K +ID I E +Y + + P +LI + N PI +Q +P
Sbjct: 22 LLQNSITKPEELIRILPVDKSKIDRIIE---YYPMRINPYYFSLIK--HKNCPIGKQAVP 76
Query: 63 ---QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E++NIL + DP+ + SP+ ++HRYP R+L + C +YCRFC R+ VG
Sbjct: 77 DMQEIEDINILSDP--DPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVG 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ K L YI+ I EV+ +GGDPL+L +++ ++LK LR I H++ILR
Sbjct: 135 YNS---ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILR 191
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P PQRI +L+ L++ P++I IH NHP E +EEA A S LA+AGI L
Sbjct: 192 IHSRIPCTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGC 250
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL GIN++ EI+ LM+ + +R+KPYY+H D+ G HF+ T++EG I+ SL
Sbjct: 251 QTVLLNGINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLY- 309
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGLC P Y++DLPGG GKV + K + S ++ + + +Y
Sbjct: 310 GYSGLCVPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357
>gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 419
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 186/313 (59%), Gaps = 3/313 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
LT+A++ + E+ + + + + TP A+L++P + PI +Q IP + EL
Sbjct: 44 LTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQAIPSRREL 103
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ PEE DP+G+++ SP +VH+YPDR+LL +L C +YCR C RR +VG +
Sbjct: 104 DFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGGDAPP--A 161
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D +A + YI QI +V+ +GGDPL+LS+ RL +L LR I+HV+I+R +R+P+V
Sbjct: 162 RDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRIGTRLPVV 221
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI+ EL L+ P+YI H NHP E + EA AA RL ++GI + +Q+VLL+G+
Sbjct: 222 LPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQAVLLRGV 280
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
N + LMR + +R++PYYL D GT H R ++ ++ L+ SG+ P
Sbjct: 281 NSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGWTSGMAIP 340
Query: 308 FYILDLPGGYGKV 320
++D PGG GK+
Sbjct: 341 HMVIDAPGGGGKL 353
>gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
Length = 416
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 197/315 (62%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T+ +DL + E+ IKE + +TP A+L++ +PN P+ +Q +P EL
Sbjct: 29 ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQAVPIMTEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + +DP+ ++ SP+ G+ HRYP+R+LL + +C +YCR C RR G Q T +
Sbjct: 89 HKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG-QNDTAMP 147
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+AA+ YI+ ++ +V+ +GGD L++S ++L+ ++ LR I+HV+I+R SR P+V
Sbjct: 148 MDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRLGSRTPVV 207
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL+ LK+ P+++ H NHP E +EE A++ LA+AGI L +QSVLL+G+
Sbjct: 208 MPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQSVLLRGV 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND I+ +L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+ SG P
Sbjct: 267 NDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGHTSGYAVP 326
Query: 308 FYILDLPGGYGKVKI 322
+++D PGG GK+ +
Sbjct: 327 TFVVDAPGGGGKIPV 341
>gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
Length = 473
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 182/313 (58%), Gaps = 2/313 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP
Sbjct: 69 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYP 128
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+L+ + C YCR+C R +VG T + + L Y++ Q+ +V+ +GGDP
Sbjct: 129 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDP 187
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L+ K L +L LR I H++I+R +RVP+ P R+ EL L E PV++ IH N
Sbjct: 188 LTLAPKVLGGLLAELRKIPHIEIIRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 246
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + E A RL AG+ L +Q+VLL+G+ND P I+ LMR V++R++PYY++
Sbjct: 247 HPKEITPEVAEACDRLTRAGVPLGNQAVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQC 306
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ + + + G G
Sbjct: 307 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGK 366
Query: 335 YCITDHHNIVHDY 347
+ + + Y
Sbjct: 367 VILRNFEGYIAAY 379
>gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
Length = 439
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 194/322 (60%), Gaps = 3/322 (0%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+IKE + +++TP +LIN + NDPI Q P +EL+I P + EDP+ ++ SP
Sbjct: 57 KIKETLRKFPLSITPYYLSLINSEDYSNDPIFIQSFPSPKELDISPHDMEDPLAEDKDSP 116
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ I HRYPDR+LL++ + C +YCR C R+ VG L ++ + YI++ I
Sbjct: 117 VPNITHRYPDRVLLQVSNTCAMYCRHCTRKRKVGDVDSIPLK-QEILNGIEYIRQTPVIR 175
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+LS L +L LR I HVQ++R SR+P+V P R+ L+ LK+
Sbjct: 176 DVLLSGGDPLMLSDDYLDWILSELRTIPHVQVIRIGSRMPVVLPYRVTDSLVAMLKKH-H 234
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+++ H NHP E + A+++LANAGI L +QSVLL G+ND P I+ +L+ VE R
Sbjct: 235 PLWVNTHFNHPREVTASTREALAKLANAGIPLGNQSVLLAGVNDCPRIMKSLVHKLVENR 294
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYYL+ DLA G +HFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ +
Sbjct: 295 VRPYYLYQCDLAEGLNHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPLNPN 354
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
+ + ++ ++ Y
Sbjct: 355 YLVSFSTNKVILRNYEGVITTY 376
>gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 414
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 204/341 (59%), Gaps = 4/341 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + +DL + ++ + I+E + +TP A+L++ + N P+ Q +P EL
Sbjct: 29 IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQAVPIMSEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVL 126
++ + +DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Q G L
Sbjct: 89 SMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQQDSGMPL 148
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
D AA+ YI + QI +V+ +GGD L+ S +RL+ ++ LR I+HV+I+R SRVP+
Sbjct: 149 DRID--AAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRLGSRVPV 206
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI P L+ LK+ P+++ H NH E ++E+ AI LANAGI L +QSVLLKG
Sbjct: 207 VMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQSVLLKG 265
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 266 VNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGHTSGYAV 325
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P +++D PGG GK+ + + + N + ++ ++ Y
Sbjct: 326 PTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTY 366
>gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
Length = 433
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 194/315 (61%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T A+ L + K ++ IK N +A+TP A+LIN ++P+ PI +Q IP +E
Sbjct: 34 ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQCIPTLQET 93
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
I+ ++ DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G Q S
Sbjct: 94 LIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG-QTDLPRS 152
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K+ EA + YI++ I +V+ +GGDPL LS R++ +L+ +R I HV+I+R +RVP+V
Sbjct: 153 EKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRIGTRVPVV 212
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI L LK+ P+++ + NHP E + E+ A +LANAGI L +QSVLLKGI
Sbjct: 213 MPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQSVLLKGI 271
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND P I L + +++R++PYY++ DL+ G HFR +I +G +I+ L+ SGL P
Sbjct: 272 NDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGHTSGLAVP 331
Query: 308 FYILDLPGGYGKVKI 322
+++D PGG GK+ +
Sbjct: 332 TFVVDAPGGGGKIPV 346
>gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228]
Length = 419
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 182/288 (63%), Gaps = 2/288 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +TP A L++ + N P+ Q +P E ++ + EDP+ ++ SP+ GI HRYP
Sbjct: 61 FRMGITPYYATLMDADDHNCPVRMQAVPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYP 120
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+L + C +YCR C RR G Q + + + + L Y++ Q+ +V+ +GGD
Sbjct: 121 DRVLFLITDQCSMYCRHCTRRRFAG-QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDC 179
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L++S +L+ ++K L I HV+++R SR P+V PQRI +L+ LK+ P+++ H N
Sbjct: 180 LLISDDKLEYIIKELSEIDHVEVIRLGSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFN 238
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E ++EA A ++LANAGI L +QSVL++GIND E++ +L++ V++R++PYY++
Sbjct: 239 HPKEITKEAAEACAKLANAGIPLGNQSVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQC 298
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
DL+ G HFR + +G +I+ SL+ SG C P Y++D PGG GK +
Sbjct: 299 DLSMGIEHFRTKVSKGLEIMESLRGHTSGYCVPTYVIDAPGGGGKTPV 346
>gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 427
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 198/322 (61%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ ++S + ANL E+ I++ + + +A+TP A+LIN + PI Q
Sbjct: 21 WQLRNRIMSSDELDQYANLSVYEKA-SIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EL + +DP+ ++ SP G+ HRYPDR+LL + + C +YCR C R+ VG
Sbjct: 80 IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ V D A+ YI+ I +V+ +GGDP +LS RL+++++ +R I HVQ++R
Sbjct: 140 NE-KVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L++ LK+ P++I H NHP EF+EE+ A+++LA+AGI L +Q
Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND I+ L V R++PYYL+ DL+ G HFR + +G +I+ +L
Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG P +++D PGG GK+ +
Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPV 339
>gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 437
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 205/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH K L + + L + L +K++ + + + I++TP +LIN + NDP+
Sbjct: 28 WQMRHSIKDLETFEALLDVKLSEKQR-KAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELNI+ + DP+ +++ SP + HRYPDR+LL + +VCP+YCR C R+
Sbjct: 87 LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ E + YI+ QI +V+ +GGDP +LS L +L LR I+HV+I
Sbjct: 147 VGDED-TIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI +L+ LK+ +PV++ H NH E ++ A A+ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374
>gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
Length = 433
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 209/343 (60%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64
K + + + NL + E+ EI++ + +++TP A+LI+ N + DPI +Q +
Sbjct: 37 KDVDTLEKFLGINLDEGEK-REIQKAIEVFPMSITPYYASLIDTENLDKDPIYKQSVASS 95
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K +
Sbjct: 96 KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRKV-SEKSS 154
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++R SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+NAGI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPLGNQTVLL 273
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL +G
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGF 333
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D PGG GK+ + + I G+ + ++ I+ Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376
>gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 370
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 195/347 (56%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ T Q + L +KE + + S + ++TP NL + +PN PI Q
Sbjct: 24 WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R
Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + SY + ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367
>gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 370
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+LI+ ++P DPI Q IP +EL E +DPI D++ SP+ + HR+ DR+LL +
Sbjct: 63 DLIDWNDPADPIRAQVIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQ 122
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C VYCRFCFR+E + S G + + E ALAYI + +I EVI TGGDPL L K L +
Sbjct: 123 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAE 181
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
+ + I HV++LR H+RVP+ P RI P L+ L+ G+ V I H NH E ++
Sbjct: 182 IRARIEAIAHVRLLRIHTRVPVALPSRITPGLVAALQ--GRLMVTIVTHFNHAREITQAT 239
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282
A L AG +LL+QSVLLKG+ND E L L R + L +KPYYLHH DLA G +H
Sbjct: 240 ETACRTLRQAGFVLLNQSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAH 299
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
R TI +GQ + +L+ ++SG+C P Y+LDLP G GKV I
Sbjct: 300 RRTTIAQGQALAEALRARLSGICNPVYVLDLPEGGGKVPI 339
>gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
Length = 716
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 200/326 (61%), Gaps = 8/326 (2%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H K + + + +++ L K++ K I + A TP +LI+ + NDP+
Sbjct: 28 WQLKHSIKDIETLESVFDVELDAKDKKSMQKTIE-QFPFAATPYYLSLIDIGDYKNDPVY 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q +P EELN+ + DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+
Sbjct: 87 KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
VG + K+T + YI+ ++I +V+ +GGDP +LS L +L ++ I HV+
Sbjct: 147 VGDMDN--IPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVE 204
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
++R +R P+V PQRI LI LK+ P++I H NHP EF+EE+ +ISRLA+AGI
Sbjct: 205 VIRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIP 263
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +QSVLL +ND P+I+ L+ V RI+PYYL+ DL+ G SHFR + +G +I+ S
Sbjct: 264 LGNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIES 323
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
L SG P Y++D PGG GK+ +
Sbjct: 324 LIGHTSGFAIPRYVIDAPGGGGKIPV 349
>gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 436
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 191/313 (61%), Gaps = 4/313 (1%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+ +TP +L++ + N P+ R +P E P E +DP+G++ HSP G+VHRYPDR
Sbjct: 123 VGITPYYMSLLDREDANQPLRRTVVPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDR 182
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPL 155
+LL L C YCR+C R +VG G ++ S+ E A YI++ I +V+ +GGDPL
Sbjct: 183 VLLLALDFCSTYCRYCTRSRVVG--HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPL 240
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
LS +L +L LR I H++ +R +++P V PQRI P+LI+ K+ P++++IH H
Sbjct: 241 ALSEDKLDWILGRLRSIPHLEFVRIGTKMPAVLPQRITPQLIRVFKKY-SPLWMSIHFLH 299
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
P E + EA A +RLA+AGI L SQ+VLLKG+ND + + +L+ + +R++PYY++ D
Sbjct: 300 PDECTPEANQACARLADAGIPLGSQTVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCD 359
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
+G++HFR ++ +G +I+ L+ +G P Y++D PGG GK+ + + +
Sbjct: 360 PISGSAHFRTSVSKGLEIIEGLRGHTTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDL 419
Query: 336 CITDHHNIVHDYP 348
+ ++ V+ YP
Sbjct: 420 LLRNYEGQVYRYP 432
>gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42]
gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42]
Length = 473
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++AA +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P +++D PGG GK+ + + + I + ++ YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375
>gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 370
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 194/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ T Q + L +KE + + S + ++TP NL + +PN PI Q
Sbjct: 24 WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R
Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + SY ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367
>gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
Length = 730
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 203/353 (57%), Gaps = 11/353 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
K L + + L E+ +++ ++ +++TP +LI+P N NDP+ Q +P
Sbjct: 48 KDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSA 106
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG T
Sbjct: 107 AELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT 166
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R +RV
Sbjct: 167 -LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRV 225
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +K+ PV+I H NHP E + +I A+ LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPLGNQTVLL 284
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
>gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
Length = 466
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375
>gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
Length = 396
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 197/339 (58%), Gaps = 6/339 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+RH+ + +A++L + E+ I+ + +TP A+L++P +PN PI RQ
Sbjct: 18 WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EEL DP+ + HSP+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 77 VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ + +AA+ YI +I +V+ TGGDPL LS L +L LR I HV+I+R
Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+ P RI PEL + L E P++I H NHP E + +A AI RL AGI + +Q
Sbjct: 196 GTRMPVKLPYRITPELCRLL-ERYHPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GINDD + L V +R++PYYL+ L GT+HFR IE+G I+ +L+ +
Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
+G P Y+LD P YGKV +D ++ G Y I +
Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRA-GDYVIVE 350
>gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
Length = 473
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R PIV PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P +++D PGG GK+ + + + I + ++ YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375
>gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 431
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 192/322 (59%), Gaps = 4/322 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH+ +T+ ++L + + IK ++ + +A+TP +LINP + DPI RQ
Sbjct: 51 WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL REDP+ +++HS + G+VHRYPDR L+ L +CP+ CR C R+
Sbjct: 110 VPSVHELT-GEAGREDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKRE-WR 167
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ G V +S +A + YI Q+ ++I +GGDPL LS +RL++VL LR I HV+I+R
Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+V PQRI+ EL + L + P+++ H NHP E + EA AA RL AG+ + +Q
Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKY-SPIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND NL + + ++PYYL D GT H +E G +I+ ++
Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SGL P Y++DLP G GK+ +
Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPL 368
>gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum]
Length = 383
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 200/328 (60%), Gaps = 7/328 (2%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
KE + + +E+ + I + +LI +P PI RQ IP EE+ + DP+G++
Sbjct: 26 KEGVGQ-REVEKTFPIRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGED 81
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ SP+ IVHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+
Sbjct: 82 SDSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTH 140
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
++ +VI +GGDPL+L L+ +L LR I H++++R SRVP PQR+ PEL LK
Sbjct: 141 PEVRDVILSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLK 200
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P+++ +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L +
Sbjct: 201 KY-HPLFMNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKL 259
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
+ +R+KPYYL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV
Sbjct: 260 LTIRVKPYYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVP 319
Query: 322 IDTHN-IKKVGNGSYCITDHHNIVHDYP 348
I + + + +G + ++ V+ YP
Sbjct: 320 ILPPDYLVSMEDGDVVLRNYEGNVYTYP 347
>gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 420
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 206/348 (59%), Gaps = 5/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T + L + +E+ + IK+ +A+TP A+L++ +P+ PI R
Sbjct: 25 WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELN + EDP+ +++ SP++GI HRYPDR+L + C +YCR C RR + GS
Sbjct: 84 VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143
Query: 121 -QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
K + D A+ YI+ Q+ +V+ +GGD L++S +RL+ +L L I+HV+I+R
Sbjct: 144 TDKAAPIEVID--KAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVR 201
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R P+V PQRI LI LK+ P+++ H NHP E + EA A+++LA+AGI L +
Sbjct: 202 IGTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND P + L+ V+ R++PYY++ DL+ G HFR ++ G +I+ SL+
Sbjct: 261 QSVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRG 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + S + ++ ++ Y
Sbjct: 321 HTSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368
>gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
Length = 466
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375
>gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208]
gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3]
Length = 473
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P +++D PGG GK+ + + + I + ++ YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375
>gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa]
gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 195/314 (62%), Gaps = 3/314 (0%)
Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ +++TP +LIN + NDP+ +Q P EL I + DP+ ++ SP+ G+ HRY
Sbjct: 47 FPLSITPYYLSLINTDDHENDPVFKQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRY 106
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
PDR+LL++ +VC +YCR C R+ VG + ++ +D + Y+++ +I +V+ +GGD
Sbjct: 107 PDRVLLQVSNVCSMYCRHCTRKRKVGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGD 165
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS L +L +R I HVQ++R +R+P+V P RI PEL++ LK+ +P+++ H
Sbjct: 166 PLMLSDDYLDWILTEVRRIPHVQVIRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHF 224
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + A A+ LA+AGI L +QSVLL G+ND I+ +L+ VE R++PYYL+
Sbjct: 225 NHPREINASAKEALRLLADAGIPLGNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQ 284
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
DLA G SHFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ + + +
Sbjct: 285 CDLAEGLSHFRTPVGKGIEIMESLRGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTN 344
Query: 334 SYCITDHHNIVHDY 347
+ ++ ++ Y
Sbjct: 345 KVVLRNYEGVITTY 358
>gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase
[Dehalococcoides ethenogenes 195]
gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Dehalococcoides ethenogenes 195]
Length = 708
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 198/336 (58%), Gaps = 10/336 (2%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
E+ +++ ++ +++TP +LI+P N NDP+ Q +P ELN ++EDP+ ++
Sbjct: 42 EKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSAAELNFSCHDKEDPLAED 101
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
SP GI HRYPDR+L + + C +YCR C R+ VG T LS D L YI+
Sbjct: 102 VDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT-LSRDDLVKGLEYIKNT 160
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R +RVP+V PQRI P L++ +K
Sbjct: 161 PQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRVPVVLPQRITPHLVKIIK 220
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ PV++ H NHP E + +I A+ LA+AGI L +Q+VLL +ND P ++ L+
Sbjct: 221 KY-HPVWVNTHFNHPREITATSIRALRLLADAGIPLGNQTVLLAKVNDCPRVMKALVHKL 279
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
VE R++PYYL+ D A G SHFR +I +G +I+ +L SG P Y++D P G GK+
Sbjct: 280 VENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGFAVPTYVIDAPNGGGKIP 339
Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
I + + + + ++ I+ Y PPK
Sbjct: 340 IMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375
>gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG']
Length = 383
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 194/320 (60%), Gaps = 6/320 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E+ + + + +LI +P PI RQ IP EE+ + DP+G+++ SP+ I
Sbjct: 33 EVEKTFPVRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
VHRYPDR+L + + CP+YCR+C R+ M+G+ +G V S + E + YI+ ++ +VI
Sbjct: 90 VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEGVVTRS-EVEEGIEYIRTHPEVRDVIL 148
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+L L+ +L LR I H++I+R SRVP PQR+ PEL LK+ P+++
Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KPY
Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IK 328
YL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I + +
Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327
Query: 329 KVGNGSYCITDHHNIVHDYP 348
+ +G + ++ V+ YP
Sbjct: 328 SMEDGDVVLRNYEGNVYTYP 347
>gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 365
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q R KT T + + +++I + S + ++TP L P +PN PI Q
Sbjct: 21 IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EEL E++DP+ + P+KG+ HRYPDR+L L HVC VYCRFC R+ V S
Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362
>gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
Length = 378
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 207/332 (62%), Gaps = 3/332 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ + S ++L + +E+++ I+ Y +A+TP +L++P + DPI Q I
Sbjct: 29 QIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQAI 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++ E++ + +P + G+ HRYPDR+L+ + C VYCR C R+ + ++
Sbjct: 88 PRRIEVDEEAQSAGEPDALREEGDIPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF-AE 146
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ ++ + L+YI+E ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+RF
Sbjct: 147 GERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIVRFG 206
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+P++ PQR E + + E P++I H NHP E +E A A+ RL GI + +Q+
Sbjct: 207 TRLPVLAPQRFFDEELLSILEKYSPIWINTHFNHPKEVTELAEEAVDRLLRHGIPVNNQT 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND+PEI+ +L R + +++KP YL H D G HFR T+++G +I+ L+ KI
Sbjct: 267 VLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFLRGKI 326
Query: 302 SGLCQPFYILDLPGGYGKVKID-THNIKKVGN 332
SG+ P Y +DLPGG GKV + + + + GN
Sbjct: 327 SGMGIPTYAVDLPGGKGKVPLQPNYVVGREGN 358
>gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter
fumaroxidans MPOB]
gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 460
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 201/351 (57%), Gaps = 8/351 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPNDPIA 57
QLR++ QD I + DE+K +++ +A+TP A+L++ ++P+ P+
Sbjct: 92 WQLRNRI----QDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVR 147
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
R +P E P E EDP+G+ S L +VHRYPDR+L + C YCR+C R M
Sbjct: 148 RCVVPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRM 207
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG++ ++ + A+ YI+ I +V+ +GGDPL L + L+ +L LR I HV+
Sbjct: 208 VGNRGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEF 267
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
LR ++VP+V PQR+ L++ LK+ P++++IH HP E + E A +RLA+AGI L
Sbjct: 268 LRIGTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPL 326
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
SQ+VLL G+ND+ E + L +++R+KPYYL+ D G+SHFR + +G +I+ L
Sbjct: 327 GSQTVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGL 386
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ SG P Y++D PGG GKV + + + ++ ++ YP
Sbjct: 387 RGFTSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYP 437
>gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300]
gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300]
Length = 483
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 2/288 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP
Sbjct: 73 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYP 132
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+L+ + C YCR+C R +VG T + L Y++ Q+ +V+ +GGDP
Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDP 191
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L+ K L +L LR I+H++I+R +RVP+ P RI EL L E P+++ IH N
Sbjct: 192 LTLAPKVLAGLLSELRKIEHIEIIRIGTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVN 250
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + E A RL AG+ L +QSVLL+G+ND P I+ L+R V++R++PYY++
Sbjct: 251 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQC 310
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ +
Sbjct: 311 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358
>gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
Length = 384
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 190/313 (60%), Gaps = 3/313 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++A+TP A+L++P +P P+ Q +P++EEL I + DP ++ SP+ G+VHRYP
Sbjct: 71 FAVAVTPHFASLLDPEDPLCPLRLQVVPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYP 130
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR+LL L C YCR+C R +V SQ ++ +A +AY++E +++ +V+ +GGDP
Sbjct: 131 DRVLLLALDTCAAYCRYCTRSRLV-SQGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDP 189
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L++S + L +L+ LR I H++ +R SRVP PQRI PEL+ L++ V++++H
Sbjct: 190 LLMSDEPLDNLLRRLRAIPHIEFVRIGSRVPSFLPQRITPELVAVLRK--HRVWLSLHFC 247
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E + E A LA+ GI L SQ+VLLKG+ND + L +L ++LR++PYYL+
Sbjct: 248 HLRELTPEVAQACDLLADGGIPLGSQTVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQC 307
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
D GT+H R +++ G +++ L+ +G P Y++D PGG GKV I + NG
Sbjct: 308 DPVIGTAHLRTSVQTGIDLISKLRGHTTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGK 367
Query: 335 YCITDHHNIVHDY 347
+ + + Y
Sbjct: 368 TTVRNWEGKTYTY 380
>gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 457
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 190/323 (58%), Gaps = 2/323 (0%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+ +++ + +TP +L++P +P P+ + +P E P E +DP+G++ HSP
Sbjct: 132 EALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTVLPSTAEFVRTPGEADDPLGEDGHSP 191
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ G+VHRYPDR+LL L C YCR+C R +VG + S E Y+Q Q+
Sbjct: 192 VPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVGHGE-IAPSDARLEKIFQYLQNSPQVR 250
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL L ++L +L+ LR I H++ +R +++P V PQRI PEL+ ++
Sbjct: 251 DVLISGGDPLALKDEKLAYILRRLREIPHIEFVRIGTKMPAVLPQRITPELVNAIRPY-H 309
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
PV++++H HP E + E+ A RLA+AGI L SQ+VLLKG+ND+ E + L + R
Sbjct: 310 PVWMSLHFLHPDECTPESKQACERLADAGIPLGSQTVLLKGVNDNVETMKQLTHKLLMNR 369
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYYL+ D +G++HFR ++ +G +I++ L+ +G P Y++D PGG GK+ +
Sbjct: 370 VRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGHTTGYAVPTYVIDAPGGGGKIPLQPD 429
Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348
+ +G + + + YP
Sbjct: 430 AVVGREDGHLVLRNFEGKLFRYP 452
>gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 363
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 3/321 (0%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++N + + NLI+P++P+DPI RQ +P+ +E IL EE+ DP+ + N+S + +
Sbjct: 32 DLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVVPRWQEQRILDEEQLDPLCEVNYSVTERL 91
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+HRY R+ VCP+YCR CFRR G+ +G S + E A Y+ + E++F
Sbjct: 92 IHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTFQGPA-SKEQIEKAAEYVAVHPAVKEILF 150
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208
TGGD LS K L+ +++T R + ++R SR+P P RI+ +LI LK+ P Y
Sbjct: 151 TGGDVFTLSTKALEAMIQTFRDKRPDLVIRLCSRMPASYPMRIDADLIAMLKQFNTAPFY 210
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ NH E +E+AI A+ +AGI ++Q+VLLKG+NDD +L L T V RIKP
Sbjct: 211 LMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQTVLLKGVNDDVCVLEELCNTLVFNRIKP 270
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNI 327
YYL DL +GT+HFR+ ++EG I A L++++SGL P Y +DLP G GKV + +
Sbjct: 271 YYLFQGDLVSGTAHFRVPLKEGLAIEAELRKRLSGLAMPLYAIDLPQGGGKVPLMQGYLS 330
Query: 328 KKVGNGSYCITDHHNIVHDYP 348
++ G G + + YP
Sbjct: 331 EQSGCGLWSFRTVEGEIRTYP 351
>gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
Length = 472
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +L + +E+ + ++ + + +TP A+L+NP NP PI Q
Sbjct: 31 WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375
>gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 365
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q R KT T + + +++I + S + ++TP L +P +PN PI Q
Sbjct: 21 IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EEL E++DP+ + P+KG+ HRYPDR L L HVC VYCRFC R+ V S
Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362
>gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
Length = 422
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 194/340 (57%), Gaps = 2/340 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T+ + L + + EI+E +A+TP A+LI+P +P DP+ RQ +P E
Sbjct: 29 ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQAVPSILET 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ + DP+ ++ SP+ G+ HRYPDR +L L C +YCR C RR G + S
Sbjct: 89 HVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG-ETDHAYS 147
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
AAL YI+ +V+FTGGDP ++ L VL + I HV+I+RF +R P+V
Sbjct: 148 RDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRFGTRTPVV 207
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI +L LK PV++ H NHP E + ++ AA ++LANAGI L +QSVLLKG+
Sbjct: 208 MPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQSVLLKGV 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND P + L + + LR++PYY++ DL+ G HFR + +G +I+ L+ SG+ P
Sbjct: 267 NDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGHTSGMAVP 326
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+I+D PGG GK+ + + + + + + ++ + Y
Sbjct: 327 TFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTY 366
>gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
Length = 358
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 188/319 (58%), Gaps = 5/319 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L +KEQ E S + + + A+LI P + +DPI RQ +P E+ P E EDP+
Sbjct: 26 LTEKEQAWEKDGTSPPFGV--STYYASLITPSDSDDPIRRQILPTSCEMMYSPGESEDPL 83
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ HS ++HRY +R+ + C VYCR CFRR G+Q+G +++D AA Y+
Sbjct: 84 AEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRGPA-TTEDIIAAARYV 142
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
++ E++FTGGD LS++++ ++ R ++ I+R SRVP+V P RI L+
Sbjct: 143 GAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITDGLMA 202
Query: 199 CLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+K+ + P ++ + NHP E + ++ A +R +AGI + +QSVLL+G+NDD IL L
Sbjct: 203 VMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGILEEL 262
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ RIKPYYL DL GT+H R+ +E+G +V L+ ++SGL P Y +DLP G
Sbjct: 263 CNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDLPEGG 322
Query: 318 GKVKIDTHNIK-KVGNGSY 335
GKV +D+ +K + +G++
Sbjct: 323 GKVPVDSMYLKGRDSDGAW 341
>gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
Length = 439
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 184/315 (58%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++ + E+ ++ +S + ++ TP +LI+ N NDP+ Q +P EL
Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQLMPDTAEL 124
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
DP+G+ + S + G+VHRYPDR+++ L +CPV CR C R+ G V +
Sbjct: 125 CFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V
Sbjct: 184 QAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI+ EL L + G +++ H NHP E +EE+ A RL AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCNMLSKYGT-IWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQSVLLKGI 302
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND I +L + +++PYYL D GT HF TIE G I+ L+ SGL P
Sbjct: 303 NDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGYTSGLAVP 362
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GK+ +
Sbjct: 363 NYVIDLPGGGGKITV 377
>gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400]
Length = 353
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 183/310 (59%), Gaps = 14/310 (4%)
Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86
++ + Y + +TP L+ P DPI RQ IP EL +++ DP+ + SP+
Sbjct: 28 QLAPVIRRYPMRITPGYLRLVE--APGDPIWRQCIPDPAEL--CDDQQSDPLHEERLSPV 83
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKS 142
G++HRYPDR++ + C VYCRFC R+ VG ++S+ E L YI E
Sbjct: 84 PGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGC-----MTSRHCEDPFGEPLRYIAETP 138
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I +VI +GGDPL+L +RL+++L L I HV+++R +R P+ P+RI L + LK
Sbjct: 139 AIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPVTLPERITARLCRMLKR 198
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+Y+ H NHP E + EA A +RLA+AGI L +QSVLL +NDDP ++ LM+ +
Sbjct: 199 Y-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLADVNDDPAVMTRLMQLLL 257
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+R++PYY+H DL GT HFR + G +I+ +L+ SG+ P Y++D PGG GK+ +
Sbjct: 258 SIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMATPHYVIDAPGGKGKIPL 317
Query: 323 DTHNIKKVGN 332
I + G+
Sbjct: 318 LPDCISRRGD 327
>gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
Length = 433
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 209/343 (60%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64
K + + + NL K E+ EI++ + +++TP A+LI+ N + DPI +Q +
Sbjct: 37 KDVDTLEKFLGINLDKHEK-KEIQKAIEVFPMSITPYYASLIDTKNLDKDPIYKQSVASS 95
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K +
Sbjct: 96 KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++R SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI L+ LK+ P++I H NHP E ++ + A+ +L+++GI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPLGNQTVLL 273
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL +G
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D PGG GK+ + + + G+ + ++ I+ Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376
>gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
Length = 447
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 191/314 (60%), Gaps = 3/314 (0%)
Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ +++TP +LI+ + NDP+ RQ P EL+I P + DP+ ++ SP GI HRY
Sbjct: 64 FPLSITPYYLSLIDTADYANDPVFRQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRY 123
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
PDR+L + ++C +YCR C R+ VG + G + E LAYI+ ++ +V+ +GGD
Sbjct: 124 PDRVLFHVSNLCAMYCRHCTRKRKVGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGD 182
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+L + L +L LR I+HV+++R SR+P+V P R+ +L+ +++ PV++ H
Sbjct: 183 PLMLPDETLDWLLWNLRKIEHVEVVRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHF 241
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + A A+++LA+AGI L +QSVLL G+ND P I+ +L+ V R++PYYL+
Sbjct: 242 NHPREVTRSAREALAKLADAGIPLGNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQ 301
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
DL+ G +HFR + +G +I+ SL SG +P Y++D PGG GK+ + + +
Sbjct: 302 CDLSEGLTHFRTPVGKGIEIIESLVGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATN 361
Query: 334 SYCITDHHNIVHDY 347
+ ++ ++ Y
Sbjct: 362 KVVLRNYEGVITTY 375
>gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2]
gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2]
Length = 433
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 210/343 (61%), Gaps = 4/343 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
K + + ++ +KE+ EI++ + + +++TP A+LI+ N DPI +Q +
Sbjct: 37 KDVDTLENFLGITFDEKEKT-EIQKAIDVFPMSITPYYASLIDIKNLGKDPIYKQSVASS 95
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K +
Sbjct: 96 KELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
S ++ + A+ YI+ ++I +V+ +GGDPL+LS + L +L + IKHV+++R SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLL 273
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL +G
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D PGG GK+ + + + G+ + ++ I+ Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376
>gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 385
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 192/343 (55%), Gaps = 4/343 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L +A++L + +E+ + + +A+TP A+L++P +P+ PI Q IP E
Sbjct: 25 ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQAIPSARE 84
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P + DPIG+ H P + IVH+Y DR+L + C VYCR C RR + G
Sbjct: 85 AEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFGADGG-F 143
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E +AY++ ++ +VI +GGDPL+LS +RL +L LR I HVQ+LR +R P+
Sbjct: 144 DRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRVATRAPV 203
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P R+ P L L+ P+++ H NHP E + +A AA L + G+ + +QSVLL+G
Sbjct: 204 TCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQSVLLRG 262
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N +L +L + R++PYYLH DLA GT+H R +E G I+ +++ + SGL
Sbjct: 263 VNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGRTSGLAI 322
Query: 307 PFYILDLPGGYGKVKID-THNIKKVGNGSYCITDHHNIVHDYP 348
P +DLP G GK+ + ++ + + G G++ + H + YP
Sbjct: 323 PHLAVDLPDGGGKITLQPSYQLGREG-GAHALRSHRGGRYLYP 364
>gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus
NVH 391-98]
Length = 472
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375
>gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
Length = 411
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 185/303 (61%), Gaps = 2/303 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + +KE +A+TP +LI+ NPN P+ +Q IP E + + DP+
Sbjct: 40 LTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQAIPTHAETHHSAADLLDPLH 99
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ SP G+ HRYPDR+LL + +C +YCR C RR G Q + S D A+ YI
Sbjct: 100 EDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG-QTDSSSSKDDISKAIDYIA 158
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
Q+ +V+ +GGD L++S RL+ ++ LR I HV+I+R +R P+V PQRI +L+
Sbjct: 159 RTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRIGTRTPVVCPQRITDDLVNM 218
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK+ P+++ H NHP E +EE+IAA R+ANAGI L +QSVLL+G+ND + L+
Sbjct: 219 LKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQSVLLRGVNDCVPTMKKLVH 277
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK
Sbjct: 278 QLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 337
Query: 320 VKI 322
+
Sbjct: 338 TPV 340
>gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 471
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 206/348 (59%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYP 375
>gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 482
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE
Sbjct: 46 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 165 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385
>gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 433
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 203/329 (61%), Gaps = 3/329 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEEREDPI 78
++ E+ EI++ + +++TP A+LI+ N + DPI +Q + +EL + E EDP+
Sbjct: 50 LENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIYKQSVASSKELILENFEMEDPL 109
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K + S ++ + A+ YI
Sbjct: 110 SEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSSNPSKEEIQKAIDYI 168
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ +I +V+ +GGDPL+LS + L +L + IKHV+++R SRVP+V PQRI L+
Sbjct: 169 RNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVELIRIGSRVPVVLPQRITDNLVN 228
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P++I H NHP E ++E+ A+ +L+++GI L +Q+VLL G+ND P ++ L
Sbjct: 229 TLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLLAGVNDCPYVMRKLN 287
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ V R++PYYL+ DL+ G SHFR + +G +I+ SL +G P Y++D PGG G
Sbjct: 288 QKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGFAVPRYVVDAPGGGG 347
Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
K+ + + I G+ + ++ I+ Y
Sbjct: 348 KIPVMPNYIVSWGSDRVILRNYEGIITTY 376
>gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
Length = 360
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 185/313 (59%), Gaps = 2/313 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+ +TP A+L+ +P++P+ R IP +E LP E DP+G+++ +P+ G+VHRYPDR
Sbjct: 34 VGITPYYASLMGLDDPDEPLRRTHIPVGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDR 93
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+L C YCR+C R MVG G S + AL YI ++ +V+ +GGDPL
Sbjct: 94 VLFLATGTCSTYCRYCTRSRMVGQAGGEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPL 153
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
++ +L +L LR I HV+ +R +++PIV P R+ +L++ LK P++++IH H
Sbjct: 154 TIADDKLDYLLGRLRAIPHVEFIRLGAKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTH 212
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
P E + EA A RLA+AGI L SQ+VLLKGIND +IL + + + R++PYYL+ D
Sbjct: 213 PAELTPEATEACKRLADAGIPLGSQTVLLKGINDSVDILKPMYQALLMRRVRPYYLYQCD 272
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
G++HFR + +G +I+ L+ +G P +++D PGG GK+ + +
Sbjct: 273 PITGSAHFRTPVAKGLEIIEGLRGHTTGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDL 332
Query: 336 CITDHHNIVHDYP 348
+ + NI++ YP
Sbjct: 333 ILRNFENILYRYP 345
>gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273]
gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273]
Length = 438
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 200/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH +TL++ + L L EQ + + +++TP +LIN + NDP+
Sbjct: 28 WQMRHSVRTLSAFESLLGITL-SDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ + YI+ Q+ +V+ +GGDP +LS L +L L+ I+HV++
Sbjct: 147 VG-DRDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI P L+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374
>gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes
195]
gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195]
Length = 439
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 185/315 (58%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++ + E+ +++ +S + ++ TP +L++ N NDP+ Q +P EL
Sbjct: 65 VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQLMPDTAEL 124
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
N DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V +
Sbjct: 125 NFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V
Sbjct: 184 QAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRIGTRYPVV 243
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI+ EL L + G P+++ H NHP E +EE+ A RL AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQSVLLKGI 302
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + +L + +++PYYL D GT HF IE G I+ L+ SGL P
Sbjct: 303 NDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377
>gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 443
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 192/325 (59%), Gaps = 6/325 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
LRH K++ + + L N E+ E++E + +A+TP +LI+ N DP+
Sbjct: 33 WHLRHTIKSIDTVERLLNTTF-SPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ +P EL I E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+
Sbjct: 92 RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG +V K A L YI++ I +V+ +GGDP +L + +L LR I+HV++
Sbjct: 152 VGDVD-SVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI P L++ LK+ P+++ H NHP E + + A++ LA+AGI L
Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L+ V R++PYYL+ DL+ G + FR + +G +I+ SL
Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
SG P Y++D PGG GK+ +
Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPV 354
>gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195]
Length = 471
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYP 375
>gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
Length = 471
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375
>gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
Length = 473
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454
gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
Length = 370
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 189/316 (59%), Gaps = 3/316 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E+ + IK Y A+TP +LINP +P DPI Q IP+ E++ + +P
Sbjct: 39 EEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQAIPRVVEVDEKVQSAGEPDALKE 98
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ G+ HRYPDR+LL + C VYCR C R+ + SQ + ++ + + YI+
Sbjct: 99 EGDIPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF-SQGERARTKEEIDTMIDYIKRHE 157
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLK 201
+I +V+ +GG+PL LS ++L+ +L LR IKHV+I+RF +R+P++ PQR N +L+ L
Sbjct: 158 EIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEIIRFGTRLPVLAPQRFFNDKLLDIL- 216
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E P++I H NHP E +E A A+ RL GI + +Q+VLLKG+NDDPE++ L R
Sbjct: 217 EKYSPIWINTHFNHPNEITEYAEEAVDRLLRRGIPVNNQTVLLKGVNDDPEVMLKLFRKL 276
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
+ +++KP YL H D G HFR TI++G +I+ L+ ++SG P Y +DLPGG GKV
Sbjct: 277 LRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYLRGRLSGFGIPTYAVDLPGGKGKVP 336
Query: 322 IDTHNIKKVGNGSYCI 337
+ + +KK +
Sbjct: 337 LLPNYVKKRKGNKFWF 352
>gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY]
gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis]
gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375
>gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
Length = 424
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 195/322 (60%), Gaps = 3/322 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ T Q NL+ +E+ + I + + ++P A LI+P +PNDP+ +Q
Sbjct: 23 WQVKNRITTIDQLKKIINLLPEEE-EAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ + DP+ ++ SP+ G+ H YPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAGH 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ ++ + AL YI+ + +V+ +GGD ++S + + +LK LR I HV+I+RF
Sbjct: 142 TDNSMPQNR-IDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V+P RI L+ LK+ P+++ H NHP E +E +I A +LANAGI + +Q
Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND I +L+ V++R++PYYL+ DL+ G HFR + +G +I+ L+
Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG P +++D PGG GK+ +
Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPV 341
>gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
Length = 473
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 411
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 175/296 (59%), Gaps = 2/296 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
++ + R +P E +LP E DP+G+ HSP+ GIVHRYPDR+L + C YCR+C
Sbjct: 105 SEALRRCILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYC 164
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R +VG + G + + AL YI++ ++ +V+ +GGDPL L +++ +L LR I
Sbjct: 165 TRSRLVG-KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAI 223
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
HV+I+R S+VP V PQRI P L++ L+ P++I++H HP E + + A +RLA+
Sbjct: 224 PHVEIVRIGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLAD 282
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
GI L SQ+VLL G+NDD E + LM V R++PYY++ D G+SHFR ++ G
Sbjct: 283 GGIPLGSQTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLS 342
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
I+ L+ SG C P Y++D PGG GKV + + + ++ + + YP
Sbjct: 343 IIQGLRGHTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYP 398
>gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 406
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 3/294 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L KE+ D I + +A+TP A+LI + PI Q +P +EL + DP+
Sbjct: 41 LTPKEK-DGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQAVPNPKELVCTRGDMRDPL 99
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
++ SP+ G+ HRYPDR+LL + C +YCR C RR + G Q L + A +YI
Sbjct: 100 HEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG-QNDRSLPKAQLDRAFSYI 158
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ I +V+ +GGDP L+ ++L+ +LK LR IKHV+++RF +R P+V PQRI PEL
Sbjct: 159 RSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCN 218
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L E PV+I H NHP E + + AA++RLA AGI + +QSVLLKGIND I+ L+
Sbjct: 219 ML-EKYHPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLV 277
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ +++RI+PYYL+ DL+ G HFR ++ G +I+ +L+ SGL P Y++D
Sbjct: 278 QGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHTSGLAVPTYVID 331
>gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 473
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 451
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
Length = 440
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 206/352 (58%), Gaps = 10/352 (2%)
Query: 1 MQLRHK--TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDP 55
QLRH L + + L + K++Q + EI + +++TP +LI+ + NDP
Sbjct: 29 WQLRHSISDLATVEKLLDIEFDPEKRKQYAKTMEI---FPMSVTPYYLSLIDTEDYENDP 85
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ +Q IP +EL+I + +DP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 86 VFKQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRK 145
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
VG V D +A L YI+ Q+ +V+ +GGDP +L ++ +L LR I+HV
Sbjct: 146 RKVGDSD-FVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHV 204
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+++R SR+P+V P RI L+ LK+ P+++ H NHP E ++ + A+++LA+AGI
Sbjct: 205 EVIRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGI 263
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
L +Q+VLL G+ND P ++ L+ V+ R++PYYL+ DL+ G +HFR + +G +I+
Sbjct: 264 PLGNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIE 323
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SL SG P Y++D PGG GK+ + + I G + ++ ++ Y
Sbjct: 324 SLIGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375
>gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 473
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
Length = 468
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 201/348 (57%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + + +TP A+L+NP +P PI Q
Sbjct: 30 WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 89 VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI + + +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E ++EA A +L +AG+ + +Q
Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G SHFR I +G +I+ +L+
Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GKV + + I + + ++ YP
Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYP 374
>gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
Length = 482
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE
Sbjct: 46 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI + Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 165 PKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385
>gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
Length = 377
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 200/327 (61%), Gaps = 7/327 (2%)
Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86
EI++I Y + +TP + I D I +Q +P + E+ E +DP+ ++ SP+
Sbjct: 28 EIEDIVGDYPMRITPTVLATIK--EKGDAIWKQVVPDRAEMADADAE-DDPLEEDLMSPV 84
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+VHRYPDR+LL + + CP+YCRFC R+ +VG K L + + A+AY++E ++ +
Sbjct: 85 PHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGFLKKGELDRAIAYLREHQEVRD 142
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
VI +GGDPL+L L+++LK+LR I H++++R +RVP P+RI P+L +K+ P
Sbjct: 143 VILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVPGSLPERITPKLCDIIKKY-HP 201
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
Y+ +H NHP E + E A LA+AG+ L +Q+VLLKG+NDDPEI+ LM + R+
Sbjct: 202 FYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLKGVNDDPEIMKRLMHQLLLARV 261
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK-IDTH 325
KPYYL+ DL GT+HFR ++E G KI+ SL+ SG+ P +++D PGG GK+ +
Sbjct: 262 KPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMGVPHFVIDAPGGGGKIPLLPAD 321
Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ + S + ++ N YP S
Sbjct: 322 YLVNLDEDSAVLRNYENRTFHYPQPGS 348
>gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
Length = 373
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 193/350 (55%), Gaps = 14/350 (4%)
Query: 7 TLTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
T+ S Q L + + + EQ+ + ++ + HY + ++ LI H P+ +
Sbjct: 25 TMPSRQPLSSTFITRPEQLAHALAIPLEPLQAVHAHYPLRISAYYLQLIKQHG--LPLWK 82
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P +ELN DP+ + N SP+ +VH+YPDR L + C +YCRFC R+ V
Sbjct: 83 QAVPDLKELND-SSGLVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKV 141
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + V++ + A L Y+ I +V+ +GGDP +L RL+++LK LR I V +
Sbjct: 142 G-KPDMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTI 200
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +RVP P R+ L LK+ P+YI H NHP E + EA A RLA+AGI L
Sbjct: 201 RIGTRVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLG 259
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
Q+VLL+G+ND PE + LMR + +R+KPYYL DL GTSHFR TIE G I+ L
Sbjct: 260 CQTVLLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLI 319
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+SG+ P Y LD PGG GK+ + H I +G + T + ++ YP
Sbjct: 320 GHVSGMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYP 368
>gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 437
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 192/318 (60%), Gaps = 4/318 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
K++ + L +KE+ ++ + + +A+TP +LI+P + NDP+ Q P
Sbjct: 36 KSIEGVERLLGIEFTEKER-KALRNTTEKFPMAITPYYLSLIDPSDYRNDPVFMQAFPST 94
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ VG + +
Sbjct: 95 DELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRKVG-DRDS 153
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ S +D + YI+ Q+ +V+ +GGDP +LS L +L + I+HV+++R +R
Sbjct: 154 IPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEVVRIGTRT 213
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI EL++ LK+ P++I H NHP E + + A+++LANAGI L +QSVLL
Sbjct: 214 PVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPLGNQSVLL 272
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
G+ND P ++ L V R++PYYL+ DL+ G +HFR I +G +I+ SL+ SG
Sbjct: 273 AGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESLRGHTSGF 332
Query: 305 CQPFYILDLPGGYGKVKI 322
P Y++D PGG GK+ +
Sbjct: 333 SIPTYVVDAPGGGGKIPL 350
>gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580]
gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2]
gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580]
gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2]
Length = 469
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 200/342 (58%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + +DL + KE+ + ++ + + +TP A+L+NP +P PI Q +P EE
Sbjct: 36 TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPLAEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 MHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI++ + +V+ +GGD L+++ + L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI +L LK+ PV++ H N E ++EA A +L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ I + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYP 375
>gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 437
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 192/314 (61%), Gaps = 3/314 (0%)
Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ +A+TP +LI+ + NDP+ Q P EEL I + DP+ ++ SP+ GI HRY
Sbjct: 64 FPLAITPYYLSLIDEEDYENDPVFLQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRY 123
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
PDR+L + ++C +YCR C R+ VG Q ++ S+ E + YI+ Q+ +V+ +GGD
Sbjct: 124 PDRVLFHISNLCSMYCRHCTRKRKVGDQD-SIPSTSQLEKGIEYIRNTPQVRDVLLSGGD 182
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P +LS ++L +L + I+HV+++R +R+P+V P RI +L+ LK+ P++I H
Sbjct: 183 PFMLSDEKLDWILTKIGEIEHVEVVRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHF 241
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E ++ + AI++LA+AGI L +QSVLL G+ND P ++ L + V+ R++PYYL+
Sbjct: 242 NHPREVTDSSRRAIAKLADAGIPLGNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQ 301
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
DL+ G SHFR + +G +I+ SL+ SG P Y++D PGG GK+ + + I
Sbjct: 302 CDLSEGLSHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATN 361
Query: 334 SYCITDHHNIVHDY 347
+ ++ ++ Y
Sbjct: 362 KVVLRNYEGVITTY 375
>gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
Length = 415
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 193/315 (61%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S +DL + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E+
Sbjct: 30 IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQAIPSIKEI 89
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ +
Sbjct: 90 HQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGASDDAMPM 149
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVV 208
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +QSVLL+GI
Sbjct: 209 LPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQSVLLRGI 267
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P
Sbjct: 268 NDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327
Query: 308 FYILDLPGGYGKVKI 322
+++D PGG GK +
Sbjct: 328 TFVVDAPGGGGKTPV 342
>gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012]
gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066]
gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055]
gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North
America USA6153]
gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B]
gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum]
gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94]
gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI]
gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI]
gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 473
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
Length = 473
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
Length = 473
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 486
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 205/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QLRH K L + + L + L + + + K I + +++TP +LI+ + NDP+
Sbjct: 80 WQLRHCIKDLDTFETLLDIRLPETLR-RQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P EL++ + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+
Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ S + + YI++ Q+ +V+ +GGDP +LS L +L L+ I+HV++
Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P V P RI EL++ LK+ P++I H NHP E + + AA+ +LA+AGI L
Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D P G GK+ + + + + ++ ++ Y
Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 426
>gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 473
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
Length = 472
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375
>gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
Length = 472
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375
>gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 411
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 194/354 (54%), Gaps = 6/354 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
QLRH L+SA +L+ A + E++ + I +TP +L + +P PI RQ
Sbjct: 59 QLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQC 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E +P + DP+G+ H +V RYPDR LL C VYCRFC R MVG
Sbjct: 118 VPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVGD 177
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + A+AY++ ++ +VI +GGDPL +S R+ +++ LR I+ V+ +R
Sbjct: 178 GGGAVALER-LAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIRL 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ PQRI EL++ LK P+++ H NHP E + A A RLA+ G +++Q
Sbjct: 237 ATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GINDD LA L R V R++PYYL D GT+H R + G ++ L+ +
Sbjct: 296 TVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQGR 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352
++G+ P I+D PGG GKV I + G + H + +Y PP S
Sbjct: 356 LTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409
>gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
Length = 414
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 5/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH+ + + ++L + + + ++IK+ + +A++P A+LI+P +PN PI Q
Sbjct: 16 WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V
Sbjct: 75 VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G+++ S K + YI+E S+I +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 135 GNREYD-YSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+ PQRI PEL + L E V++ H NHP E + EA A+ LA AG+ L
Sbjct: 194 RLGSRVPVTLPQRITPELCEIL-EKYPSVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+G+ND P I+ L ++++ +PYYL+ DL+ G HFR + G +I+ L+
Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P +++D PGG GK+ + + + + + ++ ++ YP
Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYP 362
>gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
Length = 439
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL
Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRIGTRYPVV 243
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L + +++PYYL D GT HF IE G I+ L+ SGL P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377
>gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
Length = 473
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R +R P+
Sbjct: 155 PKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 453
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 202/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH +++ Q + KE+ +E++ + I++TP +LI+ + NDPI
Sbjct: 43 WQVRHAVRSIDMVQQVLGITFDPKER-EELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P EL + E DP+ ++ SP + I HRYPDR+L + + C +YCR C R+
Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG K ++ + +AYI+E +QI +V+ +GGDP +LS + L +L L I HV++
Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V P RI +L+ LK+ KP++I NHP E + A AA+++L +AGI L
Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL IND P I+ L+ V+ RI+PYYL+ DL+ G SHFR I +G +I+ SL
Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + ++ I+ Y
Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389
>gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
Length = 472
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE
Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375
>gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
Length = 478
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%)
Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
T+ + DL NLI +E+ + +K + + +TP A L+NP +P PI Q +P E
Sbjct: 36 TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G
Sbjct: 95 ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P
Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L
Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILA 272
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 340
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 171/271 (63%), Gaps = 7/271 (2%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+ P+A QF+PQ E ++ E DPIGD+N SPL IVHRY +RIL VCPV CR+C
Sbjct: 49 DSPLANQFLPQVSENDLGGES--DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYC 106
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ +G+ L + E L Y+++ S+I E+IF+GGDPLILS +R++ L + I
Sbjct: 107 FRKNELGTNDE--LFKANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKI 164
Query: 173 KHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
H++ +RFH+R PI+ P RI ++I+ K+ + IH NH EF+EE A+S
Sbjct: 165 PHIKFIRFHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSL 224
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L LLSQSVLLKG+N+ + L L+ ++L I+PYYLHHPD G HF LT+EE
Sbjct: 225 LHAHCSNLLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEE 284
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
G+ + A+L+ + G P YI+D+PGG GKV
Sbjct: 285 GRNLYATLRNHLPGWALPQYIIDIPGGEGKV 315
>gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 439
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL
Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L + +++PYYL D GT HF IE G I+ L+ SGL P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377
>gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
Length = 439
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL
Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L + +++PYYL D GT HF IE G I+ L+ SGL P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362
Query: 308 FYILDLPGGYGKVKI 322
Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377
>gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
Length = 425
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+
Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS +
Sbjct: 90 HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+++D PGG GK + + G + + ++ Y
Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367
>gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
Length = 473
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%)
Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
T+ + DL NLI +E+ + +K + + +TP A L+NP +P PI Q +P E
Sbjct: 36 TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G
Sbjct: 95 ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P
Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L
Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILA 272
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
Length = 425
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+
Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS +
Sbjct: 90 HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+++D PGG GK + + G + + ++ Y
Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367
>gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 442
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP A L++P++ N PI Q +P E N E+ DP+ ++ ++P+ G VHRYPDR
Sbjct: 58 MAITPYYATLMDPNDINCPIRMQAVPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDR 117
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C +YCRFC RR G + S ++ +AA+ YI+ + +++ TGGDPL
Sbjct: 118 GILLVTDQCSMYCRFCTRRRFAG-EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLT 176
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + L+ +L +LR I HV+I+R +RVP V PQRI L+ LK+ P++I +H NHP
Sbjct: 177 MEDENLEWLLTSLRRIPHVEIIRIGTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHP 235
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + + A++ LANAGI L +QSVLL+GIND P I L + R++PYY++ DL
Sbjct: 236 KEITPHSARALNMLANAGIPLGNQSVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDL 295
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ G SHFR ++ +G +I+ L+ +G+ P +++D PGG GK+ +
Sbjct: 296 SRGISHFRTSVGKGIEIIEFLRGHTTGMAVPTFVIDAPGGGGKIPV 341
>gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 345
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 6/321 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
+ ++ Y + +TP LI +DP+ Q IP EL + DP+ + SP+
Sbjct: 29 LAQVVERYPMRITPHQFELIR--QADDPLGCQVIPDPREL-LDDSLLVDPLNEEQLSPVP 85
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+VHRYP R+LL + C YCRFC R+ VG +V S D + YI E ++ EV
Sbjct: 86 HLVHRYPYRVLLLVAGSCFSYCRFCTRKRKVGCSSMSV-SLGDILKGIDYIAEHPEVNEV 144
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
I +GGDPL +S + L VL L I H+Q++R SR P+V P+RI L L+ +PV
Sbjct: 145 ILSGGDPLTMSDRLLDDVLARLSRIPHLQVVRIGSRAPVVMPERITDALCALLRRY-QPV 203
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
Y H NHP E +E + A RL +G+I+ +Q+VLL+G+ND+ E L L T L+I+
Sbjct: 204 YFLTHFNHPREITEATVEACQRLVRSGVIVANQTVLLRGVNDNSETLFKLFHTLYRLQIR 263
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYYLH DL GTSHFR +E+G I+ L+ +SGL P YI+DLPGG+GKV + +
Sbjct: 264 PYYLHQMDLTCGTSHFRTRLEDGIAIMDDLRGPLSGLAVPSYIVDLPGGHGKVPVTPDYV 323
Query: 328 KKVGNGSYCITDHHNIVHDYP 348
+++G+ + +V DYP
Sbjct: 324 QRLGDHARLRAADGTLV-DYP 343
>gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
Length = 454
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 202/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + E+ + ++ + + +TP A+L++P +P+DP+ Q
Sbjct: 30 WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 89 VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R
Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H NHP E + EA A LANAG+ L +Q
Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND + L++ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D P G GK+ + + I + + + ++ YP
Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYP 374
>gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 416
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 195/321 (60%), Gaps = 4/321 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
I+E +A+TP +LI+P NP PI +Q +P EEL+ P + EDP+ ++ SP+
Sbjct: 48 IRESLKTLRMAITPYYLSLIDPDNPYCPIRKQSVPTIEELHRSPADLEDPLHEDGDSPVP 107
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWE 146
G+ HRYPDR+L + +C +YCR C RR G T L D + YI Q+ +
Sbjct: 108 GLTHRYPDRVLFLITDMCSMYCRHCTRRRFAGHHDCATPLERID--KCIEYIANTPQVRD 165
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V+ +GGD L++S +RL+ ++K LR I HV+I+R SR P+V PQRI PEL+ L++ P
Sbjct: 166 VLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRIGSRTPVVLPQRITPELVNMLRKY-HP 224
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+++ H NHP E +EE+ AA +RLA+AGI L +QSVLL+GIND ++ L+ V++R+
Sbjct: 225 IWLNTHFNHPNEITEESAAACARLADAGIPLGNQSVLLRGINDCTHVMKKLVHELVKIRV 284
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK+ +
Sbjct: 285 RPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGKIPVMPTY 344
Query: 327 IKKVGNGSYCITDHHNIVHDY 347
+ G + + +V Y
Sbjct: 345 LISQGPNRVVLRNFEGVVTTY 365
>gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter
thermophilus TK-6]
Length = 367
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 191/313 (61%), Gaps = 1/313 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
L + +D+ + E+++ I+ Y +A+TP +LI P +PNDPI Q IP++EE+
Sbjct: 24 LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQCIPRREEV 83
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + +P + G+ HRY DR+LL + C VYCR C R+ + +Q S
Sbjct: 84 DENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-AQGERSRS 142
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+++ + YI+E +I +V+ +GG+PL LS+++L+ +L LR IKHV+I+RF +R+ ++
Sbjct: 143 TEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRFGTRLLVL 202
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQR + + E P++I H NHP E +EEA A+ RL GI + +Q+VLLKG+
Sbjct: 203 APQRFFDNKLLDILEKYSPIWINTHFNHPKEITEEAEEAVERLLRRGIPINNQTVLLKGV 262
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+P+ + L R + +++KP YL H D G HFR +I++G +I+ L+ +ISG+ P
Sbjct: 263 NDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRGRISGMGIP 322
Query: 308 FYILDLPGGYGKV 320
Y +DLPGG GKV
Sbjct: 323 TYAVDLPGGKGKV 335
>gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 204/348 (58%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ S + G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375
>gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 367
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 182/315 (57%), Gaps = 3/315 (0%)
Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
H+ + +LI+ ++P DPI Q IP +EL E DPI D++ SP+ + HR+
Sbjct: 49 HHKVRAPKAYLDLIDWNDPADPIRAQVIPSPDELEEAEGELGDPIADHDFSPVPRLTHRH 108
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
DR+LL + C VYCRFCFR+E + S G + + E ALAYI + +I EVI TGGD
Sbjct: 109 TDRVLLFPTYQCAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGD 167
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL L K L +++ + I HV++LR H+RVP+ P RI L+ L + V + H
Sbjct: 168 PLSLPDKALAEIVARIEAIPHVRLLRIHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHF 226
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
NH E + A + AG +LL+QSVLLKG+ND E+L L R + L +KPYYLH
Sbjct: 227 NHAREITPATEVACRTMRQAGFVLLNQSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
H DLA G +H R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV + I+
Sbjct: 287 HGDLARGMAHRRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREG 346
Query: 333 GSYCITDHHNIVHDY 347
++ I + Y
Sbjct: 347 DTWRIRGQDGAMRTY 361
>gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 433
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 198/322 (61%), Gaps = 3/322 (0%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
EI++ + +++TP A+LI+ N DPI +Q + K+EL + E EDP+ ++ SP
Sbjct: 57 EIQKAIEVFPMSITPYYASLIDISNLKKDPIYKQSVASKKELIMEDFEMEDPLAEDKDSP 116
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ GI HRYPDR+L + C +YCR C R+ V S+ + S ++ + A+ YI+E ++
Sbjct: 117 VIGITHRYPDRVLFYVNPNCAMYCRHCTRKRKV-SESESNPSKEEIQKAIDYIKEHPEVR 175
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+LS L +L + I+HV+++R SRVP+V PQRI L+ LK+
Sbjct: 176 DVLLSGGDPLLLSDDYLDWILSEISSIEHVELIRIGSRVPVVLPQRITDNLVNILKKY-H 234
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+++ H NH E ++ ++ A+ +L+NAGI + +Q+VLL G+ND P ++ L + V R
Sbjct: 235 PIWVNTHFNHVVEITDTSVEALDKLSNAGIPIGNQTVLLSGVNDCPYVMRKLNQKLVSSR 294
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYYL+ DL+ G SHFR +I +G +I+ SL +G P Y++D PGG GK+ + +
Sbjct: 295 VRPYYLYQCDLSKGISHFRTSISKGLEIIESLIGHTTGFAVPRYVVDAPGGGGKIPVMPN 354
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
+ G+ + ++ ++ Y
Sbjct: 355 YVVSWGSDRVILRNYEGVITTY 376
>gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
Length = 436
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ +T + L + E+ IK +A+TP A L++P NP PI RQ
Sbjct: 26 WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL P ++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 85 VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + +A+L YI++ Q+ +V+ +GGD L+ L+ +L L+ I HV+++R
Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V PQ I L+ LK+ P+++ NHP E + E+ A +LA+AGI L +Q
Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND I+ L+ V++R++PYYL+ DL+ G HFR ++ +G +I+ SL
Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK++I + + + + ++ ++ Y
Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369
>gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13]
Length = 473
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + +DL + E+ + +K + + +TP A+L+NP +P PI Q +P +E
Sbjct: 36 TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K +AA+AYI QI + + +GGD L+++ + L+ +LK LR I H++I+R +R P+
Sbjct: 155 PKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +EE+ A L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + I + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYP 375
>gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 437
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 181/300 (60%), Gaps = 5/300 (1%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
E+ +E+KE + +A+TP +LI + NDPI Q P EL+I+ E+ DP+ ++
Sbjct: 52 EKYEELKETLEKFPLAITPYYLSLIETEDYENDPIFMQSFPSVHELDIIEEDLADPLDED 111
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQE 140
SP++GI HRYPDR+L + + C +YCR C R+ VG + + KD + YI
Sbjct: 112 RDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRKVGDVE--YIPDKDQISKGIDYINN 169
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
Q+ +V+ +GGDPL+L L+ +L L I HV+I+R SR+P+V P RI+ L++ L
Sbjct: 170 NPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEIVRIGSRLPVVLPYRIDSNLVEML 229
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
++ P++ NHP E + + A+ +LA+ GI L +QSVLL G+ND P I+ LM
Sbjct: 230 RQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPLGNQSVLLSGVNDCPRIMKTLMHK 288
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
V R++PYY++ DL+ G SHFR + +G +I+ SL+ SG P Y++D PGG GK+
Sbjct: 289 LVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESLRGHTSGFAVPTYVIDAPGGGGKI 348
>gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
Length = 425
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 187/310 (60%), Gaps = 2/310 (0%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
DL + E+ + +KE +A+TP +LI+ + PI +Q IP +E++
Sbjct: 35 DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIHQSDA 94
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+ DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + + +
Sbjct: 95 DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R SR P+V PQRI
Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ND
Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332
Query: 313 LPGGYGKVKI 322
PGG GK +
Sbjct: 333 APGGGGKTPV 342
>gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 438
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 208/351 (59%), Gaps = 8/351 (2%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q RH KT+ +D+ N + +E+ E+K + +A+TP A+LI+ N +DP+
Sbjct: 29 WQFRHTIKTVEDFEDVLNISFSPEEK-KEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q EEL++ E DP+ +++ SP++ + HRYPDR+L + ++C +YCR C R+
Sbjct: 88 KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
VG Q + +KD+ L YI+E ++ +V+ +GGDP +LS ++ +L + I+HV+
Sbjct: 148 VGDQDH--IPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVE 205
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
++R +R+P+V P RI +LI L + ++I H NHP E ++ + A+ +L AGI
Sbjct: 206 VIRIGTRMPVVLPYRITEDLIDILSKYDN-LWINTHFNHPRELTDSSRQALKKLVKAGIP 264
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +Q+VLL G+ND P I+ +LM V+ R++PYY++ DL+ G SHFR + +G +I+ S
Sbjct: 265 MGNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIES 324
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ SG P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 325 LRGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTY 375
>gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 346
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 187/316 (59%), Gaps = 6/316 (1%)
Query: 18 NLIKKEQID-EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
N+ KK I E ++ Y ++P A LI D I +Q IP EL+ + D
Sbjct: 13 NITKKSTIAAEFTSVAASYPFRVSPSYAKLIR--REGDAIWKQCIPDLRELDD-AGQCPD 69
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+ ++ SP+ G++HRYPDR++L + + CPVYCRFC R+ VG + + ++ + A+
Sbjct: 70 PLAEHLLSPVPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMD 128
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
YI I ++I +GGDPL+L L +L+ LR I HV I+R +RVP+ P+R+ PEL
Sbjct: 129 YIAANPAIRDIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPEL 188
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
LK P+YI H NHP E + + A LA+AGI L +Q+VLL+G+ND + + +
Sbjct: 189 CTLLKRF-HPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRS 247
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L + LR++PYY+H DL GT+HFR I G +I+ L+ +SG+ P Y++DLP G
Sbjct: 248 LQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDG 307
Query: 317 YGKVKIDTHNIKKVGN 332
GKV I ++++ G+
Sbjct: 308 KGKVPILPDDVERQGD 323
>gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
Length = 382
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 188/303 (62%), Gaps = 2/303 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E++ + DP+
Sbjct: 9 LSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEADLLDPLH 68
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + + + A+ YI
Sbjct: 69 EDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDDAMPMDR-IDKAIEYIA 127
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V PQRI PEL++
Sbjct: 128 KTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRITPELVEM 187
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK+ P+++ H NHP E + E+ A +ANAGI L +QSVLL+GIND ++ L+
Sbjct: 188 LKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHVMKRLVH 246
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D PGG GK
Sbjct: 247 DLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGK 306
Query: 320 VKI 322
+
Sbjct: 307 TPV 309
>gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 425
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 189/315 (60%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+
Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS +
Sbjct: 90 HQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIGSRTPVV 208
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q+VLL+GI
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQTVLLRGI 267
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327
Query: 308 FYILDLPGGYGKVKI 322
+++D PGG GK +
Sbjct: 328 TFVVDAPGGGGKTPV 342
>gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
Length = 425
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 186/310 (60%), Gaps = 2/310 (0%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
DL + E+ + +KE +A+TP +LI+ + PI +Q IP +E+
Sbjct: 35 DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIYQSDA 94
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+ DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + + +
Sbjct: 95 DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R SR P+V PQRI
Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ND
Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332
Query: 313 LPGGYGKVKI 322
PGG GK +
Sbjct: 333 APGGGGKTPV 342
>gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905]
gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905]
Length = 462
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +P E
Sbjct: 37 TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 97 IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R +R P+
Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QSV+L G
Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ SG
Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 335 PTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYP 376
>gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
Length = 462
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +P E
Sbjct: 37 TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 97 IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R +R P+
Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QSV+L G
Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ SG
Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 335 PTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYP 376
>gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4]
Length = 468
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 201/342 (58%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + +K + + +TP A L+N ++P PI Q +P +E
Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQSVPLGQE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI++ I +V+ +GGD L+++ + L+ ++K+LR I H++I+R +R P+
Sbjct: 155 PKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRLGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI +L+ LK+ PV++ H N E ++EA A +L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG
Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + G+ + + ++ YP
Sbjct: 334 PAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYP 375
>gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
Length = 495
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 199/342 (58%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + +DL + E+ + +K + + +TP A+L+NP +P P+ Q +P +E
Sbjct: 60 TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPISQE 119
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 120 IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 178
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+AYI+ ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R +R P+
Sbjct: 179 PKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRIGTRAPV 238
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ P+++ H N E +EEA A LA+AG+ + +Q+V+L G
Sbjct: 239 VFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQAVILAG 297
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 298 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 357
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 358 PTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYP 399
>gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
Length = 476
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 197/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + ++ + ++ + + +TP A+L+NP +P PI Q +P +E
Sbjct: 36 TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K +AA++YI+ Q+ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +E++ A LANAG+ + +QSV+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQSVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYP 375
>gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 402
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 178/332 (53%), Gaps = 2/332 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH LT+A D + + + H +A TP A+L++ +P PI Q
Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ + + P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
SGL P +DLPGG GKV + + G
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349
>gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319]
gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319]
Length = 470
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +P +E
Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551]
gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551]
Length = 470
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +P +E
Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
Length = 367
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 192/313 (61%), Gaps = 6/313 (1%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80
E+ + I+ Y +A+TP +LI+PH+P DPI Q IP+ E + + ED + +
Sbjct: 39 EEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQAIPRAIETDPYVQSYGEEDALRE 98
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
P + HRYPDR+L+++ C VYCR C R+ + SQ ++ ++ + + YI+
Sbjct: 99 EGQIP--HMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF-SQGERSITKEEIDTIIQYIEA 155
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ +V+ +GGDPL LS+++L+ +L LR I HV+I+R +R+P++ PQR E + L
Sbjct: 156 HPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEIIRIGTRLPVLAPQRFFDEKLLKL 215
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E P++I H NHP E + A A+ L GI + +Q+VLLKG+NDDP+++ LMR+
Sbjct: 216 LERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVNNQTVLLKGVNDDPQVMLELMRS 275
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ +++KP YL H D G HFR ++E+G +I+ L+ KISG+ P Y +DLPGG GKV
Sbjct: 276 LLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLRGKISGMGIPTYAVDLPGGKGKV 335
Query: 321 K-IDTHNIKKVGN 332
+ ++ ++K GN
Sbjct: 336 PLLPSYLVRKEGN 348
>gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
Length = 419
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 190/321 (59%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+R++ T ANL +E +K + +A+TP +LI+ +PN P+ +Q I
Sbjct: 25 QVRNRIETLDDLKQFANLSDEESEGVVKTLET-LRMAITPYYFSLIDLDDPNCPVRKQAI 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Q
Sbjct: 84 PTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG-Q 142
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 143 SDDSMPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRIG 202
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +QS
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQS 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 262 VLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P +++D PGG GK +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPV 342
>gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
Length = 419
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 195/322 (60%), Gaps = 5/322 (1%)
Query: 2 QLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + +DL ANL ++E +K + +A+TP +LI+ +PN P+ +Q
Sbjct: 25 QVRNR-IETLEDLKQFANLSEEESEGVVKTLET-LRMAITPYYFSLIDLEDPNCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 83 IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 142 QSDDSMPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
SG P +++D PGG GK +
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPV 342
>gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
Length = 425
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 178/286 (62%), Gaps = 2/286 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP +LI+ ++ P+ +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR
Sbjct: 59 MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDR 118
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+S K+L+ ++K LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP
Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A LANAG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL
Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ G HFR + +G +I+ L+ SG P +++D PGG GK +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342
>gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
Length = 344
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 186/317 (58%), Gaps = 7/317 (2%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
+ Y + +T LI P D I RQ +P EL+ ++ DP+ + SP+ G++
Sbjct: 32 LVRRYPLRITRRYLGLIG--KPGDAIWRQCVPDPCELD--DDQLSDPLDEERLSPVPGVI 87
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
HRYPDR++ + + C VYCRFC R+ VG + + + A+ YI I +VI +
Sbjct: 88 HRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGS-NGRSGDDAVRYIAATPAIRDVILS 146
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+L +RL+ +L LR I HV+++R +R P+ P+RI L + LK P+Y+
Sbjct: 147 GGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPVTLPERITARLCRMLKRY-HPLYVN 205
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NHP E + EA A +RLA+ GI L +Q+VLL G+ND+P I+ LM+ + +R++PYY
Sbjct: 206 THFNHPREITPEATKACARLADTGIPLGNQTVLLAGVNDEPAIMTLLMQRLLAIRVRPYY 265
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
+H DL GT HFR + G I+ +L+ SG+ P++++D GG GK+ + +++
Sbjct: 266 IHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMATPYFVIDAAGGKGKIPLLPDAVERR 325
Query: 331 GNGSYCITDHHNIVHDY 347
G+ ++ + ++ + +Y
Sbjct: 326 GD-TWLLRNYRGEIVEY 341
>gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
Length = 435
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 196/330 (59%), Gaps = 16/330 (4%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH + + S ++L + +E+ E+++ H+ + +TP +LI+ + NDP+
Sbjct: 29 WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P EELN+ + DP+ + SP+ GI HRYPDR+L + +VC +YCR C R+
Sbjct: 88 KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147
Query: 118 VGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
VG+ + T+L D YI++ I +V+ +GGDPL+L L +L L I
Sbjct: 148 VGNVDYIPDRETILKGID------YIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNI 201
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
HV+++R +RVP+V P RI +L++ LK P++I H NHP E + + A+ +LA+
Sbjct: 202 PHVEVVRIGTRVPVVLPCRITDDLVEMLK-GHHPLWINTHFNHPKEVTPASREALRKLAD 260
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AGI L +Q VLL G+ND P+I+ L + V+ R++PYY+ DL+ G SHFR ++ +G +
Sbjct: 261 AGIPLGNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIE 320
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I+ +L SG P Y++D PGG GK+ +
Sbjct: 321 IIENLVGHTSGFAVPTYVVDAPGGGGKIPV 350
>gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 402
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH LT+A D + + + H +A TP A+L++ +P PI Q
Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ + + P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++
Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
SGL P +DLPGG GKV + + G
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349
>gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 402
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH L +A D + + + H +A TP A+LI+ +P P+ Q
Sbjct: 20 WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ E + P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
SGL P +DLPGG GKV + + G
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349
>gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
Length = 437
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 188/322 (58%), Gaps = 3/322 (0%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
E++E ++ + +++TP A+LI+ N DPI +Q EEL E DP+ ++ SP
Sbjct: 57 ELQEAADVFPLSITPYYASLIDVKNFREDPIFKQSFVGVEELITENFEMADPLAEDKDSP 116
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ G+ HRYPDRIL + H C VYCR C R+ VG ++ S K E L YI+ QI
Sbjct: 117 VPGLTHRYPDRILFYISHACAVYCRHCTRKRKVGDTD-SIPSKKQIEKGLDYIRNNPQIR 175
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+L L +L L I H++++R +RVP+V P RI EL+ LK+
Sbjct: 176 DVLLSGGDPLLLPDDYLDWILTELWSIPHIEVIRIGTRVPVVLPYRITDELVNMLKKH-H 234
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P++I H NH E ++ + A+ +LA+ GI L +QSVLL+G+ND P ++ L + R
Sbjct: 235 PLWINTHFNHIKEITKSSKNALRKLADVGIPLGNQSVLLRGVNDCPNVIKKLNQKLAANR 294
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYYL DL+ G SHFR ++ +G +I+ SL SG P Y++D PGG GK+ + +
Sbjct: 295 VRPYYLFQCDLSEGLSHFRTSVRKGVEIIESLIGHTSGFAVPRYVVDAPGGGGKIPVMPN 354
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
+ G + ++ ++ Y
Sbjct: 355 YVISWGTDRVILRNYEGVITTY 376
>gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
Length = 425
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 185/311 (59%), Gaps = 2/311 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP +LI+ ++ P+ +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR
Sbjct: 59 MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+S K+L+ ++K LR I HV+I+R +R P+V PQRI PEL LK+ P+++ H NHP
Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A LANAG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL
Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
+ G HFR + +G +I+ L+ SG P +++D PGG GK + + G
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVV 356
Query: 337 ITDHHNIVHDY 347
+ + ++ Y
Sbjct: 357 LRNFEGVITTY 367
>gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 406
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 200/315 (63%), Gaps = 4/315 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q +P EL
Sbjct: 69 ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQSVPSSLEL 128
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G + T S
Sbjct: 129 --IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-ETDTHAS 185
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R +R P+
Sbjct: 186 LDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRIGTRAPVT 245
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q VLL G+
Sbjct: 246 LPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQMVLLNGV 304
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
N+D I+ L + +++R+KPYY+ HP GTSHF + IEEG +I+ SL+ + SG+ P
Sbjct: 305 NNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGRTSGMAVP 364
Query: 308 FYILDLPGGYGKVKI 322
YI++ P G GK I
Sbjct: 365 TYIVNAPKGKGKTPI 379
>gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51]
gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
Length = 413
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 199/349 (57%), Gaps = 6/349 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + A++L + +Q EI E+ Y A++P +LI+ +P DPI Q
Sbjct: 68 WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126
Query: 61 IPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EE IL + E DP+G+ SP I RYPDR+++ + ++C +YCR C RR +G
Sbjct: 127 LPSVEE--ILDDSGEADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG 184
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + EAAL YI+ +I +V+ TGGD L+LS + L +L L IKHV+I R
Sbjct: 185 -EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKR 243
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+RVP+ P RI EL L E P+YI NHP E +EE A RL AG+IL +
Sbjct: 244 IGTRVPVTLPMRITDELCAIL-EKYPPLYINTQFNHPQEVTEETKKAADRLIKAGVILGN 302
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND PEI+ L + +++R++PYY+ H GTSHF I++G +I+ +L+
Sbjct: 303 QAVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRG 362
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P YI++ PGG GK I + + + I V YP
Sbjct: 363 YTSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411
>gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 437
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 186/314 (59%), Gaps = 3/314 (0%)
Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ +A+TP +LI+ + NDP+ Q P EEL I + DP+ ++ SP+ GI HRY
Sbjct: 64 FPMAVTPYYLSLIDVDDYANDPVFLQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRY 123
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
PDR+L + + C +YCR C R+ VG ++ S + E L YI+ Q+ +V+ +GGD
Sbjct: 124 PDRVLFHVSNTCAMYCRHCTRKRKVGDVD-SIPSRDNLERGLEYIRNTPQVRDVLLSGGD 182
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS ++L +L +R I HV+++R +R P+V P RI EL+ L + P+++ H
Sbjct: 183 PLMLSDEKLDWLLTEIRAIDHVEVVRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHF 241
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + + AI RLA+AGI L +QSVLL G+ND ++ L ++ RI+PYYL+
Sbjct: 242 NHPRELTASSRRAIQRLADAGIPLGNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQ 301
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
DL+ G +HFR I +G +I+ SL+ SG P Y++D PGG GK+ + + + G
Sbjct: 302 CDLSEGLTHFRTPIGKGIEIIESLRGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPN 361
Query: 334 SYCITDHHNIVHDY 347
+ ++ ++ Y
Sbjct: 362 KVVLRNYEGVITTY 375
>gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
Length = 469
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +P EE
Sbjct: 36 TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG
Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +I+D PGG GK+ + + I + + + ++ YP
Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375
>gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
Length = 419
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 203/352 (57%), Gaps = 9/352 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ +T+ ++L + + +IK+ +S+A++P A+LI+P +P PI Q
Sbjct: 21 WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P EL E EDP+ ++ SP K I HRYPDR+L + + C +YCR C R+ V
Sbjct: 80 VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G+++ S K + YI+E ++ +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 140 GNREYD-YSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R +R P+ PQRI PEL + L GK V++ H NHP E + EA A+ LA AGI
Sbjct: 199 RIGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITSEAKKAMGMLARAGIP 255
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +QSVLL+G+ND P I+ L + ++ +PYYL+ DL+ G HFR ++ G +I+
Sbjct: 256 LGNQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
L+ SGL P +++D PGG GK+ + + + + + ++ ++ YP
Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYP 367
>gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 425
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP +LI+ ++ PI +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR
Sbjct: 59 MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+S K+L+ +++ LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP
Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A LA+AG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL
Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ G HFR + +G +I+ L+ SG P +++D PGG GK +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342
>gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 436
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 194/325 (59%), Gaps = 6/325 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H ++++S + L K++ E++ + +++TP +LI + NDPI
Sbjct: 29 WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q EL + EREDP+ ++ SP++G+ HRYPDR+L + ++C +YCR C R+
Sbjct: 88 LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + + YI+ + +V+ +GGDPL+L L +L LR I+HV+I
Sbjct: 148 VGDVD-SIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P R+ +L+ LK+ PV++ H NHP E + + A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L++ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
SG P Y++D PGG GK+ I
Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPI 350
>gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
Length = 425
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+A+TP +LI+ ++ PI +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR
Sbjct: 59 MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+S K+L+ +++ LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP
Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA A LA+AG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL
Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ G HFR + +G +I+ L+ SG P +++D PGG GK +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342
>gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 411
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH + AQ L +E+ ++E + + + ++P +LI+P +P P+ Q
Sbjct: 47 WQQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 166 GEAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+GL P +DLPGG GKV + + + G ++ + YP
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYP 391
>gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
Length = 401
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 177/301 (58%), Gaps = 4/301 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
IK + + +TP A+L+ P +P+ P+ RQ +P +E + DP+ + H P+K
Sbjct: 47 IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
++H Y DR+ + C +YCR+C R+ MVG + + + + +AA+ YI +I +V
Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGDPL + L+ +L LR I HV+++RF SR+P+ P RI +L L + P+
Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+I H NHP E + +A AAI RL +AGI + +Q+VLL+G+NDDP+ + L V +R++
Sbjct: 225 WINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYYL+ + GT H R IE G I+ L+ + SG P Y+LD P +GKV ++ +
Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342
Query: 328 K 328
K
Sbjct: 343 K 343
>gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
Length = 469
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +P EE
Sbjct: 36 TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQSVPISEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +EE+ A L+NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG
Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +I+D PGG GK+ + + I + + + ++ YP
Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375
>gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 435
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 197/348 (56%), Gaps = 3/348 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ DL +K+ ++ + + +TP A ++ +P+ PI Q
Sbjct: 24 WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 83 VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +A + YI+ Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R
Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L LK+ PV++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND P I+ L V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P +++D PGG GK+ + + + + + + ++ YP
Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYP 368
>gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
Length = 401
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 177/301 (58%), Gaps = 4/301 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
IK + + +TP A+L+ P +P+ P+ RQ +P +E + DP+ + H P+K
Sbjct: 47 IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
++H Y DR+ + C +YCR+C R+ MVG + + + + +AA+ YI +I +V
Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGDPL + L+ +L LR I HV+++RF SR+P+ P RI +L L + P+
Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+I H NHP E +++A AAI RL +AGI + +Q+VLL+G+NDDP+ + L V +R++
Sbjct: 225 WINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYYL+ + GT H R IE G + L+ + SG P Y+LD P +GKV ++ +
Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342
Query: 328 K 328
K
Sbjct: 343 K 343
>gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift
[Dehalococcoides sp. CBDB1]
Length = 708
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 26 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 84
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 85 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 144
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 145 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 203
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 204 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 262
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 263 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 322
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 323 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375
>gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 730
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 48 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVFIQSVPSA 106
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 284
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
>gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2]
gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2]
Length = 436
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 183/301 (60%), Gaps = 3/301 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
EQ +K+ + + +++TP +LIN + +DPI RQ + EL ++ +DP+ ++
Sbjct: 51 EQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIFRQSVASVRELEFSNDDMKDPLHED 110
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
SP+ GI HRYPDR+L + + C +YCR C R+ VG ++ ++ A + YI+
Sbjct: 111 KDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRKVGDVD-SIPGKQEILAGIDYIRNN 169
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+I +V+ +GGDPL+LS L +L L I+HV+++R +R P+V P RI + LK
Sbjct: 170 PEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEVIRIGTRTPVVLPYRITDAMTNMLK 229
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
P++I H NHP E + A A+++LANAGI L +Q+VLL G+ND P I+ +L+
Sbjct: 230 RH-HPIWINTHFNHPREVTASARDALTKLANAGIPLGNQTVLLAGVNDCPRIMRSLVHKL 288
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V R++PYYL+ DL+ G +HFR + +G +I+ SL SG C P Y++D PGG GK+
Sbjct: 289 VLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFCVPTYVIDAPGGGGKIP 348
Query: 322 I 322
+
Sbjct: 349 V 349
>gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
Length = 419
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 10/351 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ ++ + L + +E+I+ IK +S Y A++P A+L++P NP PI +
Sbjct: 70 WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128
Query: 61 IPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
IP +EL +P DP+ + SP I RYPDR+++ + + C ++CR C RR
Sbjct: 129 IPSIKELTDKYGVP----DPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRN 184
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+G + +D EAAL YI+ +I +V+ TGGDPL L +++ +L L I HV+I
Sbjct: 185 IG-EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEI 243
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
R + P+ PQRI EL + L + P+YI NHP E +EEA A +LA AG+ L
Sbjct: 244 KRIGTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVAL 302
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKGIN+DP ++ L + + +KPYY+ H GT+HF T+++G +I+ L
Sbjct: 303 GNQAVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQL 362
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ SGL P+YI++ P G+GK I + VG I + V +YP
Sbjct: 363 RGYTSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413
>gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 435
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H + + + + L N E+ +++KE + +++TP +LI+ + NDPI
Sbjct: 29 WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EEL I +E EDP+ ++ SP++GI HRYPDR+L + +VC +YCR C R+
Sbjct: 88 LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG K E + YI+ QI +V+ +GGDPL+LS L +L + I HV++
Sbjct: 148 VGDIDYIPEKEKILEG-IEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI EL+ LK+ P+++ H NHP E + + A+ +LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND I+ L+ V+ R++PYYL+ DL+ G SHFR I +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D P G GK+ + + I + ++ ++ Y
Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSY 375
>gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase
[Dehalococcoides sp. BAV1]
Length = 730
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
+ LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P
Sbjct: 48 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 106
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV
Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPLGNQTVLL 284
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
>gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 378
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 184/331 (55%), Gaps = 3/331 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q RH + AQ L +E+ ++E + + + ++P +LI+P +P P+ Q I
Sbjct: 48 QQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQSI 106
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 107 PVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKGG 166
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 167 EAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRIG 225
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q+
Sbjct: 226 TRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQA 284
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 285 VLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGHT 344
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
+GL P +DLPGG GKV + + + G
Sbjct: 345 TGLAVPHLAVDLPGGGGKVTLQPDYVVERGE 375
>gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 360
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 175/296 (59%), Gaps = 4/296 (1%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
DP+ RQ +P EL+ +DP+ + SP+ +VHRYP+R+L + H C ++CRFC
Sbjct: 51 GDPLWRQVMPDAMELSD-DAGLQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFC 109
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R+ S ++ + L YI+E Q+ +V+ +GGDPL+L RL+ +L LR+I
Sbjct: 110 TRKRRWSSP--LPMTGELLRDGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHI 167
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
HV +LR +RVP P+R+ EL L P+++ IH NHP E +EE+ A + LA+
Sbjct: 168 PHVAVLRIGTRVPCALPERVTGELATMLARH-HPLFLNIHFNHPREITEESRRACALLAD 226
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AGI L SQ+VLL+ +NDD +L L +T + LR++PYYL DL GT+HFR + G +
Sbjct: 227 AGIPLGSQTVLLRDVNDDAHVLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLE 286
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
IVA L+ +ISG+ P ++DLPGG GKV + + I+ +G + YP
Sbjct: 287 IVARLRNRISGMAVPQLVVDLPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342
>gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 454
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 180/295 (61%), Gaps = 3/295 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
K + + +++TP +LI+ + +DP+ Q P ELN+ P + DP+ ++ SP
Sbjct: 58 KRTLDKFPMSITPYYFSLIDQEDYESDPVFMQAFPDIRELNVSPHDMADPLHEDEDSPAP 117
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
GI HRYPDR+L + ++C +YCR C R+ VG + +V + + YI+ I +V
Sbjct: 118 GITHRYPDRVLFHVSNLCSMYCRHCTRKRKVG-DRDSVPDRGQLKQGIEYIRRTPAIRDV 176
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ +GGDPL+LS +RL +L +R I HV+I+R SR+P+V P RI L+ LK+ P+
Sbjct: 177 LLSGGDPLMLSDERLDWLLGEIRSIPHVEIIRIGSRMPVVLPYRITDGLLAVLKKH-HPL 235
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
++ H NHP E + + A++R+A+AGI L +QSVLL +ND P + L + V+ R++
Sbjct: 236 WLNTHFNHPRELTRTSRRALARMADAGIPLGNQSVLLADVNDCPRLFRTLNQKLVQNRVR 295
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYY++ DL+ G SHFR + +G +I+ SL SG+ P Y++D PGG GK+ +
Sbjct: 296 PYYMYQCDLSEGLSHFRTPVGKGIEIIESLVGHTSGMAVPTYVIDAPGGGGKIPM 350
>gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
Length = 419
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 205/352 (58%), Gaps = 9/352 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ +T+ ++L L+ + +IK+ + +A++P A+LI+P +P P+ Q
Sbjct: 21 WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+PQ EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V
Sbjct: 80 VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G+++ S K + YI+ ++ +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 140 GNREHD-YSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R +R P+ PQRI PEL + L GK V++ H NHP E + EA A++ LA AGI
Sbjct: 199 RLGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITPEAKKAMNMLACAGIP 255
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +QSVLL+ +ND P I+ NL ++++ +PYYL+ DL+ G HFR ++ G +I+
Sbjct: 256 LGNQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
L+ SGL P +++D PGG GK+ + + + + + ++ ++ YP
Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYP 367
>gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 416
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/267 (41%), Positives = 164/267 (61%), Gaps = 2/267 (0%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ R P E + E EDP+G+ H + GIVHRYPDR+L C YCR+C R
Sbjct: 111 LRRCIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRS 170
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+VG + G +K ++A+AYI+ I +V+ +GGDPL L RL +L LR I HV
Sbjct: 171 RLVG-RNGRKHDTKKWKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHV 229
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+I+R ++VP V PQRI PEL L++ P++I++H HP E + E + A + LA+AGI
Sbjct: 230 EIIRIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGI 288
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
L SQ+VLLKG+NDD + LM+ ++ R++PYYL+ D G++HFR +E+G +I+
Sbjct: 289 PLGSQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQ 348
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322
L+ SG P Y++D PGG GK+ +
Sbjct: 349 GLRGHTSGYAVPSYVIDAPGGGGKIPL 375
>gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 393
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E + A+TP A+L+ + D + R IP E+ E +DP+G+++ SP+ G+
Sbjct: 73 ETCSGLPFAVTPYYASLLTGTSSCDAVRRTVIPTHMEMIKGRGEADDPLGEDSCSPVDGL 132
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
VHRYPDR+L + C YCR+C R +G G + + + A+ YI+ Q+ +V+
Sbjct: 133 VHRYPDRVLFLVTEHCSTYCRYCTRSRKMGEIHSGNI--KERWQKAIDYIKATPQVRDVL 190
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+L ++ +L++L I+HV+++R ++ P+V PQRI LI+ LK +P++
Sbjct: 191 ISGGDPLVLPDASIKWLLESLSAIEHVEMIRIGTKAPVVLPQRITKSLIKILKSV-RPLF 249
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
++IH HP E + E + A + LA+AGI L SQ+VLLKG+ND + L L +++R++P
Sbjct: 250 MSIHFTHPDELTAETVQACNMLADAGIPLGSQTVLLKGVNDSVDTLKGLYHGLLKVRVRP 309
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
YYL+ D +G+ HFR +E G ++ L+ +G P Y++D PGG GK+ + +
Sbjct: 310 YYLYQCDPISGSGHFRTKVETGLNMIKGLRGHTTGYAIPNYVIDAPGGGGKIPLIPDYFQ 369
Query: 329 KVGNGSYCITDHHNIVHDYP 348
G + ++ + YP
Sbjct: 370 GKSEGQIMLKNYQGNTYLYP 389
>gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
Length = 401
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 200/323 (61%), Gaps = 5/323 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL++ ++T+A +L I +Q +EIKE + + +++TP A+LI+ + PI Q
Sbjct: 22 WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+PQKEEL E EDP+ + SP+ G+ HRYPDR+LL + + C ++CR C R+ VG
Sbjct: 81 VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140
Query: 121 QKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
G D +A + YI+ Q+ +V+ +GGDPL+L +L+K++ L+ I HV+I+R
Sbjct: 141 --GNTQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVR 198
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+V PQRI+ ELI LK+ P++I H NH E + + A+++LA+ G L +
Sbjct: 199 LGSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGN 257
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+ IND P ++ +LM V R++PYYL+ DL+ G HFR +I G +I+ SL
Sbjct: 258 QTVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIG 317
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
SG P Y++D PGG GK+ I
Sbjct: 318 HTSGFAVPRYVVDAPGGGGKIPI 340
>gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 365
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 199/338 (58%), Gaps = 7/338 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59
QL+++ +T+ ++L + E+I ++ Y A+TP +L+ NP + DPI Q
Sbjct: 15 WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E++ ++ P N + +KG+ HRY DR L+ + C VYCR C R+ +
Sbjct: 74 IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132
Query: 120 SQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
++GT + K+ + YI+ I +V+ +GGDPL L ++RL+ +L L I+H++++
Sbjct: 133 -KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVI 191
Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
R SRVP+ PQR+ + EL+ L K ++I H NHP E +E+A AI L AG+ +
Sbjct: 192 RIGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPV 250
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKG+NDD E + LMR + +++KP YL H D GT HFR +IE+G +I+ +
Sbjct: 251 NNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYM 310
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
+ ++SG P Y +DLPGG GKV + KK+ +G Y
Sbjct: 311 RGRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLY 348
>gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 437
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 180/302 (59%), Gaps = 3/302 (0%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGD 80
K++ E++E ++ + + +TP +LI+ + NDPI Q P EL + P++ EDP+ +
Sbjct: 51 KDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIFMQCFPSPAELQVEPDDMEDPLAE 110
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ P I HRYPDR+L + +VC +YCR C R+ VG ++ S + +L YI+E
Sbjct: 111 DADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRKVGDVD-SIPSEAEVIESLDYIRE 169
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I +V+ +GGDP +L RL +L L I+HV+++R +R P+V P RI EL L
Sbjct: 170 NPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEVVRIGTRTPVVLPYRITEELCAML 229
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
P+++ H NHP E + + A++RLA+AGI L +Q+VLL G+ND I+ L+
Sbjct: 230 ARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPLGNQTVLLAGVNDCSRIMKTLVHK 288
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
V R++PYYL+ DL+ G +HFR + +G +I+ +L SG P Y++D PGG GK+
Sbjct: 289 LVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENLIGHTSGFAVPTYVIDAPGGGGKI 348
Query: 321 KI 322
+
Sbjct: 349 PV 350
>gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus
UQM 2246]
Length = 481
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 3/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHSPLKGIVHRY 93
Y +A+ P +LI+P +PNDPI Q +P E + E +DP+ + SP+ G+ HRY
Sbjct: 83 YKLAIPPYFFSLIDPEDPNDPIRLQSVPSPLEAESASGHELDDPLEEEKDSPVPGLTHRY 142
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
DR LL C +YCR+C R+ ++ G S D E + Y++E +I +VI +GGD
Sbjct: 143 SDRALLVTTPNCTMYCRYCTRKRATLTRGGWEGVSADDERMIQYVREHREIKDVIVSGGD 202
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIH 212
PL L +L+ L++L+ +KHV ++R +RVP+ PQR+ +PELI L A K VY+ H
Sbjct: 203 PLTLPMGKLRYYLESLKAMKHVDVIRVGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTH 261
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E + EA+ A L AG+ + + +VLLKG+NDD + +L R + +++PYYL
Sbjct: 262 FNHPREVTPEAVRACKSLLRAGVPINNHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLF 321
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G HFR ++ +G +I+ L+ +SG+ P Y++D P G GK+ I
Sbjct: 322 HCDPVTGAGHFRTSVWKGLEIMEGLRGHMSGIGIPTYVVDGPQGSGKIPI 371
>gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 411
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 181/295 (61%), Gaps = 5/295 (1%)
Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSP 85
E++E+S Y A++P +LI+P +P+ I +Q IP L +L + E DP+ + SP
Sbjct: 91 ELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQSIPSI--LEVLDDTGELDPMNEAGTSP 148
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ + RYPDR+++ + ++C +YCR C RR +G + EA L YI+E +I
Sbjct: 149 VAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIGEVDRKTPREQIKEALL-YIREHKEIR 207
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ TGGD L+LS L +LK L I HV+I R +RVP+ PQR+ L++ LK+
Sbjct: 208 DVLITGGDALLLSDLELDWILKELSEIPHVEIKRIGTRVPVTLPQRVTDNLVKILKKY-P 266
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+YI NHP E + EA A+ +L AG++L +Q+VLLKG+ND+P I+ L +++R
Sbjct: 267 PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQAVLLKGVNDNPVIMEKLNHELLKIR 326
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
++PYY+ GT HF IE+G +I+ SL+ SGL P+YI++ PGG+GK+
Sbjct: 327 VRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGYTSGLAVPYYIVNAPGGFGKI 381
>gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 432
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 193/328 (58%), Gaps = 4/328 (1%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ +E+ +I+++ + +++P A+LI P + NDP+ Q +P +EL++ DP+
Sbjct: 92 LSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQSVPSIKELDV--SGYADPMA 149
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ SP I RYPDR+++ + + C +YCR C RR +G + +D AAL YI+
Sbjct: 150 EELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGDVDRHQ-THQDLLAALDYIR 208
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ +I +V+ TGGD L+LS K++ +L L IKHV+I R +R + PQRI PEL +
Sbjct: 209 KNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRLGTRTIVTLPQRITPELCEV 268
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
LK+ PVYI NHP E + E+ A L +AG++L +Q+VLLKGIN++P ++ L +
Sbjct: 269 LKQH-PPVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQAVLLKGINNNPHVMKKLNQ 327
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+++R++PYY+ H GT HF ++ EG +I+ L+ SGL P YI++ P GYGK
Sbjct: 328 ELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGYTSGLAVPTYIINAPNGYGK 387
Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ I + + N S + + N DY
Sbjct: 388 IPILPKYLLGIDNSSVRLRNWENRQIDY 415
>gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 367
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 185/327 (56%), Gaps = 5/327 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+Q R++ + ++L + E+ IK Y A+TP A+L++ +P+ PI +Q
Sbjct: 12 LQFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQA 70
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E I DP+GD + IVH+YPDRI++ + CPVYCR C R+
Sbjct: 71 IPSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTD 130
Query: 121 QKGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
GT + E YI+ +I +V+ TGGDPL S +RL+ +LK LR I HV+I
Sbjct: 131 LDGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEI 190
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+RF SR P++ PQRI E + L E P+++ H NHP E ++E+ A++ L G+ +
Sbjct: 191 IRFGSRYPVLLPQRITKEFCEML-EKYHPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPV 249
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGINDD + + L++ +++R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 250 QNQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGL 309
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDT 324
+G P YI+ G + ++T
Sbjct: 310 VGHTTGFATPNYIITTINGKIPIPLET 336
>gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 392
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 181/319 (56%), Gaps = 5/319 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR+ TS +DL + + I+ + Y TP A+L++ ++ N PI Q
Sbjct: 18 FQLRNLIKTS-EDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQT 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E+ I DP+GD ++ ++H+YP+RI+L + CPVYCR C R+
Sbjct: 77 IPHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTD 136
Query: 121 QKGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+GT S E AYI+ +I +V+ TGGDPLI K L+ ++K LR IKH+ I
Sbjct: 137 VEGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINI 196
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P+ PQRI + Q L E P+++ H NHP E +EEA A RL GI +
Sbjct: 197 IRIGSRYPVFAPQRITEKFCQML-EKYHPIWVNTHFNHPKEVTEEAATACDRLLRHGIPV 255
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGINDD E + +L++ + +R++PYYL+H D +G SHF T+E+G++I+ ++
Sbjct: 256 QNQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAM 315
Query: 298 KEKISGLCQPFYILDLPGG 316
+G P Y++ G
Sbjct: 316 VGFETGFSVPQYVVTTTLG 334
>gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
Length = 468
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 194/342 (56%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + ++ + + +TP A L+N + PI Q +P +E
Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQSVPIGKE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 IHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +EE+ A L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D PGG GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYP 375
>gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
Length = 378
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 196/344 (56%), Gaps = 7/344 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S Q+L I K++ + +++S + TP +L+ + DP+ RQ
Sbjct: 28 WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86
Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117
P EE++ I DP + SP++GI HRYPDR+L ++ C VYCR C R R
Sbjct: 87 FPSFEEIDPDIQNNGSNDPFNEE-RSPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+ ++ S KD + + YI++ I EV+ +GGDPL L +K+L +L L+ IKHV I
Sbjct: 146 IYGERAK--SKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDI 203
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P+V+P R E + L E ++I H NHP E ++E A+ + + G +
Sbjct: 204 IRIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPV 263
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
L+Q+VLLKGINDD I+ LMR+ + ++IKPYYL D G HFR I++G +I+ L
Sbjct: 264 LNQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYL 323
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ ++SGL P Y +DLP G GKV + I ++ + S ++
Sbjct: 324 RGRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYE 367
>gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54]
gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 353
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 172/280 (61%), Gaps = 5/280 (1%)
Query: 53 NDPIARQFIPQ-KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
DPI +Q IP +EE + + EDP+G+ SP+ +VH+YPDR LL + + C VYCRF
Sbjct: 56 GDPIWKQCIPDPREEEDFIC--MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRF 113
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C R+ MVG+++ + + ++ +A Y++ I EV+ +GGDPL+L+ ++ +L L+
Sbjct: 114 CTRKRMVGTERMHI-TEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQS 172
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
I + ++R SRVP P RI PEL+ L++ P+YI H NHP E + EA A + LA
Sbjct: 173 IPSIDVIRIGSRVPCTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLA 231
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
+ GI L Q+VLLKG+ND+ + L L +++R+KPYYL DL GT+HFR T + G
Sbjct: 232 DGGIPLGCQTVLLKGVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGI 291
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
I+ L ISG+ P LD PGG GK+ + + IK+ G
Sbjct: 292 DIMRQLYGHISGMAIPRLALDAPGGKGKIPLSPNYIKESG 331
>gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
Length = 324
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 5/310 (1%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
+TP L + H +ARQ P E LP E DP+ D HSPL +VHRYPDR L
Sbjct: 7 VTPYYRRLADAHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C YCRFCFRR S + L+ +A LAY++E ++ EV+ +GGDPL+L
Sbjct: 64 ILVTDRCAAYCRFCFRRHFTASGASS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
RL +L LR ++ ++R +R+P+V P RI + + A +P+++ H NHP E
Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPARIT-ARLARILAAARPLWVVTHFNHPAE 181
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL DLAA
Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
GTSHFR + + L +SGL P +DLP G GKV++ ++ + Y +
Sbjct: 242 GTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301
Query: 339 DHHNIVHDYP 348
++ YP
Sbjct: 302 GPDGGLYRYP 311
>gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila
DSM 6578]
Length = 324
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 173/310 (55%), Gaps = 5/310 (1%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
+TP L + H +ARQ P E LP E DP+ D HSPL +VHRYPDR L
Sbjct: 7 VTPYYRRLADTHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C YCRFCFRR S + + L+ +A LAY++E ++ EV+ +GGDPL+L
Sbjct: 64 ILVTDRCAAYCRFCFRRHFTASGESS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
RL +L LR ++ ++R +R+P+V P RI + + A +P+++ H NHP E
Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRIT-ARLARILAAARPLWVVTHFNHPAE 181
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL DLAA
Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
GTSHFR + + L +SGL P +DLP G GKV++ ++ + Y +
Sbjct: 242 GTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301
Query: 339 DHHNIVHDYP 348
++ YP
Sbjct: 302 GPDGGLYRYP 311
>gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 173/312 (55%), Gaps = 7/312 (2%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+ ++ + Y + + P +LI P DP+ RQ IP EL ED + + SP
Sbjct: 38 EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ +VH+YPDR LL C +YCRFC R+ VG + + +AAL Y+ I
Sbjct: 95 VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+L+ L +L LR I H++I+R SRVP PQR+ L LK
Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG+NDD + LMR + +R
Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKGVNDDAATIKGLMRGLLRIR 272
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323
+KPYYL DL+ GT HFR +E+G I+ L SGL P LD PGG GK+ + D
Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332
Query: 324 THNIKKVGNGSY 335
H + K G ++
Sbjct: 333 YHQVLKAGKLTF 344
>gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
Length = 478
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 193/342 (56%), Gaps = 2/342 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ + DL + E+ + ++ + + +TP A+L+NP +P PI Q +P EE
Sbjct: 36 TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPIGEE 95
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G +
Sbjct: 96 IYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K + A+ YI+ ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+
Sbjct: 155 PKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRIGTRAPV 214
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L LK+ PV++ H N E +EE+ A L N+G+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQAVILAG 273
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND I+ L + V++R++PYY++ DL+ G HFR + +G +I+ L+ SG
Sbjct: 274 INDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYSV 333
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
P +++D P G GK+ + + + + + ++ YP
Sbjct: 334 PTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYP 375
>gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 374
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 184/317 (58%), Gaps = 5/317 (1%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS +L IK E+ + +IS + TP +LINP++ NDPI +Q +P +E+
Sbjct: 34 ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQILPDIKEI 91
Query: 68 NILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M +
Sbjct: 92 DEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RA 150
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++R SR
Sbjct: 151 RTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVIRIGSREL 210
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R E + L E V++ H NHP E + E A+ + + G +L+Q+VLLK
Sbjct: 211 VVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLK 270
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND E + NLMR ++++IKPYYL D G HFR +E G +I+ L+ ++SGL
Sbjct: 271 GINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLRGRLSGLG 330
Query: 306 QPFYILDLPGGYGKVKI 322
P + +DL GG GKV +
Sbjct: 331 IPTFAVDLLGGLGKVPV 347
>gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
Length = 381
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 180/314 (57%), Gaps = 5/314 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+RH+ +T+ L + ++ I + Y ++TP A+L++P +P PI +Q
Sbjct: 25 WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL P+ DP+GD + +VH+YPDR++L + CPVYCR C R+
Sbjct: 84 VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143
Query: 121 QKGTVLSSKDT---EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+GT + E L YI+E +I +V+ TGGDPL ++L++++ LR I V+I
Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P++ PQR+ E + L PV++ H NHP E + EA AA+ RL G+ +
Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKGINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322
Query: 298 KEKISGLCQPFYIL 311
+ ++G P Y+L
Sbjct: 323 QGHMTGFGVPQYVL 336
>gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
Length = 446
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 11/347 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ L S +D + L E + + + +TP +LINP +P+DPI +Q
Sbjct: 28 WQLSHR-LNSVED-FEQVLRLTESERKALTTQGLFRVDITPYFVSLINPDDPDDPIRKQV 85
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ EE+ ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 86 IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T S + E + Y++ Q+ +V+ +GGDPL L+ K L+++L LR I+H++I+R
Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+ PQRI E + + PV++ IH NHP E ++E A RL AG+ L +Q
Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND + L++ V +R++PYYL+ DL G HFR + +G +I+ L+
Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + N ++DH I+ +Y
Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPV-------MPNYLISMSDHKIILRNY 363
>gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
Length = 426
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 190/305 (62%), Gaps = 3/305 (0%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
NL ++E+ D I +I + + + +TP A+L++ ++P P+ Q +P E + + DP
Sbjct: 50 NLTEQEKAD-ITKILDGFRVGITPYYASLMDENDPMCPVRMQAVPTILEAHRSEADLLDP 108
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ SP G+ HRYPDR+L + C +YCR C RR + G G S +D +A +AY
Sbjct: 109 LHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAGETDG-ARSIEDIDACIAY 167
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I++ Q+ +V+ +GGD L++ L+ V+K LR I HV+++R SR P+V PQRI PEL+
Sbjct: 168 IKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRIGSRTPVVCPQRITPELV 227
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ L++ PV++ H NH E ++ + AA++ LA+AGI L +QSVLL+G+ND P + L
Sbjct: 228 KMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQSVLLRGLNDCPHKMREL 286
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ V+ R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D PGG
Sbjct: 287 VHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGG 346
Query: 318 GKVKI 322
GK +
Sbjct: 347 GKTPV 351
>gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 172/312 (55%), Gaps = 7/312 (2%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+ ++ + Y + + P +LI P DP+ RQ IP EL ED + + SP
Sbjct: 38 EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ +VH+YPDR LL C +YCRFC R+ VG + + +AAL Y+ I
Sbjct: 95 VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDPL+L+ L +L LR I H++I+R SRVP PQR+ L LK
Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+Y+ H NHP E + EA A RLA GI L +Q+VLLKG+NDD + LMR + +R
Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKGVNDDAATIKELMRGLLRIR 272
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323
+KPYYL DL+ GT HFR +E+G I+ L SGL P LD PGG GK+ + D
Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332
Query: 324 THNIKKVGNGSY 335
H + K G ++
Sbjct: 333 YHQVLKAGKLTF 344
>gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 416
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 180/320 (56%), Gaps = 3/320 (0%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++++ A TP +L+NP +PN P+ RQ IP EEL + P ++DP+G+ SP
Sbjct: 96 VRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQAIPATEEL-LNPVGKDDPMGEQYTSPAP 154
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
I RYPDR+++ + + C +YCR C RR +G + + + +D +AAL Y++ +I +V
Sbjct: 155 AITRRYPDRLIINVTNQCGMYCRHCQRRRNIG-EVDRMTAREDLQAALDYVRNHPEIRDV 213
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGD L+L+ + + +L L I HV+I R SR + P R+ EL L E PV
Sbjct: 214 LLTGGDALMLNEEIIDWLLTELDNIPHVEIKRLGSRTLVTMPMRVTDELCAVL-EKHSPV 272
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
YI H N+P E + A +L AG+ L +Q+VLL G+NDDP ++ L +++ I+
Sbjct: 273 YINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQAVLLAGVNDDPHVMKKLNHMLLQVMIR 332
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYY+ H GT+HFR +E G +I+ L+ + SG+ P +I++ P GYGK + +
Sbjct: 333 PYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQTSGMAIPTFIVNAPEGYGKTPMLPEYL 392
Query: 328 KKVGNGSYCITDHHNIVHDY 347
G I N V +Y
Sbjct: 393 ISSGRDKIFIRTWENRVFEY 412
>gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 354
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 189/341 (55%), Gaps = 4/341 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T DL + E+ D + + + A+TP I+ +P+ PI +Q
Sbjct: 8 WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EL E +DP+ + H P+KG+ HRYPDR + + HVC VYCRFC R+ V +
Sbjct: 67 LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S + E AL Y + ++++ EVI +GGDPL LS L +L L+ I H+ +R
Sbjct: 127 PEETPNRS-EWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
H+R P+ P R+ L + P+Y+ H NHP E S+E + R+ G + + +
Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL++L + + IKPYYLH D G+S F + +E+G +I L+
Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
SG+ P Y+ DL GG GKV + ++K + Y ++
Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNY 345
>gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 410
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 4/322 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++E S + I ++P +LI+P +P P+ Q IP + E I P E DP+G++ P +
Sbjct: 65 VQETSALFRIGISPYYLSLIDPEHPFCPVRMQSIPVRAEARIRPGELADPLGEDKTRPEE 124
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWE 146
IVH+YPDR+L L C VYCR C RR + +Q G LS + + Y++ ++ +
Sbjct: 125 CIVHKYPDRVLFLALDTCSVYCRHCTRRRI--TQGGVAELSKEQLRRGVDYVRSHPEVRD 182
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V+ +GGDP +LS RL+++L L I HV+++R +RVP+ P R+ L + L+ P
Sbjct: 183 VLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRIGTRVPVCLPMRVTDALAKTLRRYA-P 241
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
V++ H NHP E + EA A RL + G+ + +Q+VL++ +N D I+ L + R+
Sbjct: 242 VFVVTHFNHPKEVTPEAREACERLVDHGVPVENQAVLMRQLNSDARIIKELSHLLLRSRV 301
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+PYYLH D+A G H R I +G +I+ L+ +GL P +DLPGG GKV +
Sbjct: 302 RPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGYTTGLAVPHLAVDLPGGGGKVTLQPDY 361
Query: 327 IKKVGNGSYCITDHHNIVHDYP 348
+ G ++ YP
Sbjct: 362 AVEYGAQETVFRNYKGERFTYP 383
>gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 408
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 179/303 (59%), Gaps = 11/303 (3%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ----KEELNILPEEREDPIG 79
Q+++IK++ Y A++P +L N N PI +QFIP ++EL + DP+
Sbjct: 84 QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQFIPSILELQDELGL-----SDPVD 138
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ N SP K +V RYPDR+++K+ + C +CR C R+ +G Q SS + E A+ YI+
Sbjct: 139 EKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGKQDLHT-SSGNIEKAVDYIK 197
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ +I +V+ TGGD L+LS K+L +L L I HV+I R +RVP+ P RI +L
Sbjct: 198 KNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRIGTRVPVTLPMRITEKLCGI 257
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L P+YI NHP E + EA A ++L AG++L +QSVLLK IND+P I+ L +
Sbjct: 258 LGNH-PPLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQSVLLKEINDNPHIIKKLNQ 316
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+++R++PYYL H GT HF + G +I+ L+ SGL P YI+++ GG GK
Sbjct: 317 ELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGYTSGLAIPSYIVNVNGGLGK 376
Query: 320 VKI 322
V I
Sbjct: 377 VPI 379
>gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 182/336 (54%), Gaps = 10/336 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L +LTS +L + E ++ + + Y + + P +LI P DP+ RQ I
Sbjct: 17 RLLAASLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLIE--QPGDPLWRQAI 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG
Sbjct: 72 PDPRELTD-SHCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I ++I+R
Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMG 189
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+
Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQT 248
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 249 VLLKGVNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308
Query: 302 SGLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSY 335
SGL P LD PGG GK+ + D H + K G ++
Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTF 344
>gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 374
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 186/324 (57%), Gaps = 6/324 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++T TS +L IK E+ + +IS + TP +LINP++ NDPI +Q
Sbjct: 28 WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84
Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++
Sbjct: 145 LEDE-RARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR + +P R E + L E V++ H NHP E + E A+ + + G +L
Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGIND E + NLMR ++ +IKPYYL D G HFR +E G +I+ L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
++SGL P + +DL GG GKV +
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPV 347
>gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
Length = 377
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 188/340 (55%), Gaps = 18/340 (5%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T+ ++L + E+ + ++S Y +TP +LIN + NDP+ Q +P E
Sbjct: 22 SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQAVPDIRE 81
Query: 67 LNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
L L + E+P+ + + IVHRYPDR+L L + C YCR C R
Sbjct: 82 LQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATYCRHCSR 141
Query: 115 REMVGSQKGTVLSSK-DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ G +G++ + + + +AYI E+ +I +V+ +GGDPL L +L+ VL LR +
Sbjct: 142 KVHAG--QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSRLRQLP 199
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
HVQI+R +R P+ PQRI E + +K+ P++I H NHP E + EA AI RL A
Sbjct: 200 HVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIERLLEA 258
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G+ + +QSVLLKGIND E++ L+ + R++PYYL+H DL G HFR +I+ G I
Sbjct: 259 GVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSIDVGMHI 318
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
+ +L+ +G P Y++ P GK ++ + + G G
Sbjct: 319 IENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPG 356
>gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 419
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 186/352 (52%), Gaps = 12/352 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R K +T+ + L + ++ I +I ++S Y A++P A ++ PI Q
Sbjct: 73 WQMR-KRITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ DP+ + SP+ GI RYPDR+++ + + C +YCR C RR +G
Sbjct: 132 VPSTAEITD-ARGTTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 190
Query: 121 ----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
Q VL EAAL YI+E +I +V+ TGGD L+LS L +L L I HV+
Sbjct: 191 VDRHQPRRVL-----EAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVE 245
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
I R +R + PQRI L L E P+YI NHP E + EA+ A RL AG++
Sbjct: 246 IKRLGTRALVTLPQRITAGLCAVL-ERYPPIYINSQFNHPLEVTPEAVQACDRLVRAGVV 304
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +Q+VLLKGIN+DP ++ L + R++PYY+ H GTSHF +EEG I+
Sbjct: 305 LGNQAVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQ 364
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
L+ SGL P YI++ PGGYGK + + + + N V YP
Sbjct: 365 LRGYTSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYP 416
>gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 374
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 175/310 (56%), Gaps = 15/310 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P P+ RQ IP+KEE + L E DP+ + +SPL ++HRY DR L C +YCR
Sbjct: 65 DPASPLRRQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCR 124
Query: 111 FCFRREMVGSQ---KGTVLSSKDTEA-------ALAYIQEKSQIWEVIFTGGDPLILSHK 160
CFRR G V + KD + A Y++++ +I E++ +GGDPL+L
Sbjct: 125 HCFRRHFTGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDG 184
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYE 218
L +++ R + ILR +R+P V P RI P L +E G+ P+++ NHP E
Sbjct: 185 TLFRLIDLFRKHRPDLILRIGTRMPAVLPSRITPVLA---RELGRRAPLFVVCQFNHPDE 241
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
S A+ A++RLA++GI +L+QSVLL+G+NDD E L L + R+ PYYL DLAA
Sbjct: 242 VSPPAVEALARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAA 301
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
GTSH R I +G I+ SL++ +SGL P Y +DLPGG GKV I + +V +
Sbjct: 302 GTSHLRAPILKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLP 361
Query: 339 DHHNIVHDYP 348
N + YP
Sbjct: 362 GPDNRLWPYP 371
>gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
Length = 428
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLRH +L + D + ++ +++ TP A+L + I +
Sbjct: 53 WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLAKG-DAGQSIRQIL 110
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + E+ ++ DP+G+ + ++HRY DR+L + +C VYCRFC R+ G
Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTG- 169
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + +++ E AL+YI+ + I EVI +GGDPL +S K+L +VL LR I+HV+I+R
Sbjct: 170 QEQAFIRNEEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+V P R+ +L+Q LK+ KPV++ H NHP E + EA+ A+ RL + G+ +++Q
Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL GIN+ P ++ L R + LR+KPYY+ D + GT H R ++E+ +I L
Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348
Query: 301 ISGLCQPFYILDLPGGYGKV 320
+SGL P LD+P G GK
Sbjct: 349 LSGLAMPNLSLDIPNGGGKT 368
>gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon]
Length = 515
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 176/296 (59%), Gaps = 12/296 (4%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86
+++ Y + + P +LI D I +Q +P EL E+ E DP+ + SP+
Sbjct: 34 KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEEKDSPV 87
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E+ +I +
Sbjct: 88 SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KKEQVLQGIEYIREREEIRD 146
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V+ +GGDPL+L+ L L+ L+ IKHV++LR +RVP PQRI L+ L+ P
Sbjct: 147 VLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCALPQRITDALLSLLRRY-HP 205
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +R+
Sbjct: 206 LYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I
Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP ++ L+ ++LR
Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKELVHGLLKLR 446
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+KPYYLH + EEG I+ SL+ SG+ P I+
Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481
>gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
Length = 422
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 9/306 (2%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---ED 76
+ E ++ I ++ HY A++P L+ PI +Q IP +E+ E+ ED
Sbjct: 92 LSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQAIPSIKEI----EDHSGVED 147
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+G+ SP I RYPDR+++ + + C +YCR C RR +G + K +AAL
Sbjct: 148 PMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EVDVHKPRKVLQAALD 206
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
YI+E +I +V+ TGGD L+L K++ +L L I HV+I R +R P+ PQRI P L
Sbjct: 207 YIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRIGTRTPVTMPQRITPTL 266
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
L E P+YI NHP E + EA A RL AG++L +Q+VLLK IN+ P+++
Sbjct: 267 CAIL-EKHPPIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQAVLLKDINNHPDVMKR 325
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L ++ +++R++PYY+ H GT HF ++EEG I+ L+ SGL P YI++ P G
Sbjct: 326 LNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGYTSGLAVPTYIINAPNG 385
Query: 317 YGKVKI 322
YGK I
Sbjct: 386 YGKTPI 391
>gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C]
Length = 419
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 179/317 (56%), Gaps = 4/317 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L S Q L ++ ++ +E++ Y +TP +LI+ NPNDPI RQ IP E
Sbjct: 40 SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQGIPDLSE 99
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ DP+ + S + G+VHRYPDR L + C +YCR C R+ M +G
Sbjct: 100 LDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMW--HEGESF 157
Query: 127 SSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
S+D A + YI+ + I EVI +GGDPL ++ + L L LR I +++LR +R+P
Sbjct: 158 RSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRIGTRLP 217
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P I EL+Q L +P+++ NHP E + +I A R+ AGI + +QSVLL+
Sbjct: 218 VVLPMAITDELVQMLARH-RPLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQSVLLR 276
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND E++ +L + ++PYYL D +G HFR +I +G +I+ ++ GLC
Sbjct: 277 GVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGHTGGLC 336
Query: 306 QPFYILDLPGGYGKVKI 322
P +++D PGG GKV +
Sbjct: 337 IPTFVVDAPGGGGKVPL 353
>gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 417
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 172/295 (58%), Gaps = 4/295 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
I ++ Y A++P +L+ N+P+ Q +P EL LP+ DP+ + SP
Sbjct: 97 ITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQAVPDPREL--LPKGELDPMDEAGTSPAP 154
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
I RYPDR+++ + + C ++CR C RR +G S +D AAL YI +I +V
Sbjct: 155 RITRRYPDRLIINVTNQCAMFCRHCQRRRNIGEIDQHA-SREDVRAALHYISGNPEIRDV 213
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGD L+LS + L +L L I HV+I R +R+P+ PQR+ PEL + + + P+
Sbjct: 214 LITGGDALLLSDRTLDWILTELDRIPHVEIKRIGTRIPVTLPQRVTPELCEVISKH-PPI 272
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
Y+ NHP E + EA A L AG +L +Q+VLL+GIND P ++ L + +R++
Sbjct: 273 YVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQAVLLRGINDCPVVMKKLNHELLRIRVR 332
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYY+ HP GTSH ++IE+G +I+ +L+ SGL P YI++ PGG+GK+ +
Sbjct: 333 PYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGHTSGLAVPTYIINAPGGFGKIPL 387
>gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 353
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 6/291 (2%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
+ Y + +T +LI N DPIARQ IP EEL+ DP+ + + SP+ G++H
Sbjct: 42 AETYPMRITKYFLSLIREQN--DPIARQVIPSAEELSDA-SLSPDPLCEEDQSPVPGLIH 98
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RYP +L ++ + C VYCR C R+ VG K ++++ + YI+ +I EV+ +G
Sbjct: 99 RYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VTAEALAQGVDYIRSNQEIREVVLSG 156
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL++ +L +L+ LR I HV+ LR HSR+P V PQRI PEL + L + P+Y+ I
Sbjct: 157 GDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGVLPQRITPELAKGLADF-HPLYMNI 215
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
NHP E + E+ A LA+ G+ L Q+VLLKG+NDD +L LM + +R++PYYL
Sbjct: 216 QFNHPREITPESEEACRILADQGVPLGCQTVLLKGVNDDEAVLRELMEELLRIRVRPYYL 275
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G +HF + I G K++ +L+ I G P Y++DLPGG GK +
Sbjct: 276 HQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIPHYVVDLPGGGGKAPL 326
>gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 422
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 175/300 (58%), Gaps = 9/300 (3%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---EDPIGDNN 82
+ I+++ Y A++P L P+ Q IP EE+ ++R EDP+G+
Sbjct: 98 EAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQAIPCIEEV----KDRYGVEDPMGEEY 153
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
SP++G+ RYPDR+++ + + C +YCR C RR +G + S K E AL YI+E
Sbjct: 154 TSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EIDVHKSRKVLEGALQYIRENK 212
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I +V+ TGGD L+LS ++++ +L L I HV+I R +R P+ PQRI PEL + L E
Sbjct: 213 EIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRLGTRTPVTMPQRITPELCKIL-E 271
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+YI NHP E + EA A L AG++L +Q+VLLK IN+ P+++ L ++ +
Sbjct: 272 NHPPIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQAVLLKNINNQPDVMKRLNQSLL 331
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+R++PYY+ H GT HF +++G I+ L+ SGL P YI++ P GYGK +
Sbjct: 332 TIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGYTSGLAVPTYIINAPNGYGKTPV 391
>gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
Length = 418
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 182/331 (54%), Gaps = 4/331 (1%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
NL +KE+ +EIK + Y A++P A LI+P N D I +P E PE D
Sbjct: 80 VNLTEKEK-EEIKNVGATYRWAISPYYAALIDPENKYDSIRLLSVPTGSEA-AHPEGEVD 137
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+G+ +P I RYPDR+++ + C +YCR C RR +G + T S ++
Sbjct: 138 PMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG-ETDTHKSDAVIMESID 196
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
YI+ +I +V+ TGGD L LS KRL+ +LK L+ I HV +R +R + PQRI EL
Sbjct: 197 YIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRLGTRTLVTMPQRITDEL 256
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ LK+ +P+YI H NHP E + E A +LAN GI L +Q+VLL GIN+D ++
Sbjct: 257 VDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQAVLLNGINNDKYVMRL 315
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L +++R++PYY+ H GT HF ++++G +I+ L+ SG+ P YI++ P G
Sbjct: 316 LNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPKG 375
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
GK I + S I +V DY
Sbjct: 376 QGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406
>gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
Length = 427
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 193/345 (55%), Gaps = 12/345 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS + L + +E+ + I+++ Y A++P +L+ +P+ PI RQ +P EL
Sbjct: 80 ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLMG-EDPSCPIRRQALPSAAEL 138
Query: 68 NILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E E DP+ + SP GI RYPDR+++ + + C +YCR C RR +G +
Sbjct: 139 -----EDEVGSLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG-EVD 192
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ + E AL YI++ +I +V+ TGGD L+LS L +L L I HV+I R +R
Sbjct: 193 RDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRIGTR 252
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ PQRI L + L + P+Y+ NHP E ++EA AA RLA AG++L +Q+VL
Sbjct: 253 VPVTLPQRITDNLCRILAKH-PPIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQAVL 311
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+N+ P I+ L + +++R++PYYL L GT+HF IEEG +I+ L+ SG
Sbjct: 312 LRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGYTSG 371
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
L P YI++ P G GK+ I + + + N + YP
Sbjct: 372 LAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416
>gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
Length = 437
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 174/297 (58%), Gaps = 3/297 (1%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
+I+ + +A++P +L++ HN NDPI +Q P ELNI P + DP+ + SP
Sbjct: 57 DIERTLAQFPMAISPYYLSLVDIHNYDNDPIFKQCFPSVLELNISPCDMSDPLHEEVDSP 116
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
I HRYPDR+L + +VC +YCR C R+ VG ++ S + + YI+ I
Sbjct: 117 APCITHRYPDRVLFHVSNVCGMYCRHCTRKRKVGDLD-SIPSKESLLQGIEYIKNTPVIR 175
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+V+ +GGDP +LS + +LK + I HV+++R +R P+V P RI EL+ LK+
Sbjct: 176 DVLLSGGDPFLLSDTMIDWLLKEITAIDHVEVVRIGTRTPVVLPFRITDELVSILKKYDN 235
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+++ H NH E + EA AA+ +L AGI L +QSVLLKGIND I+ +L+ +
Sbjct: 236 -IWLNTHFNHSREMTTEAGAALKKLKLAGIPLGNQSVLLKGINDCTYIMKDLLHKLILNG 294
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++PYYL+ DL+ G HFR I G +I+ +L+ SG P Y++D PGG GK+ +
Sbjct: 295 VRPYYLYQCDLSEGLEHFRTNIGTGIEIMENLRGHTSGFAIPTYVIDAPGGGGKIPV 351
>gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 422
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 4/330 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNN 82
++ IK +S A++P +LI+ N PI +Q +P E+ I + +DP+G+
Sbjct: 96 EVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQSVPSLHEI-IECKGEDDPMGEEM 154
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
SP I RYPDR+++ + + C +YCR C RR G + KD EAAL YI+ S
Sbjct: 155 SSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFGETDNHA-AHKDLEAALQYIKNNS 213
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I +V+ TGGD L+LS + L +L L I HV+I R +R P+ PQRI L LK
Sbjct: 214 EIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKRIGTRTPVTLPQRITANLCAVLKR 273
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+YI N P E + EA A RL AG++L +Q+VLLKGIND+ ++ L + +
Sbjct: 274 H-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGNQAVLLKGINDNVHVMKKLNQELL 332
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++R++PYYL GT+HF + G I+ L+ SGL P Y+++ PGGYGK +
Sbjct: 333 KIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRGYTSGLAIPTYVINAPGGYGKTPV 392
Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ + + I+ +YP +++
Sbjct: 393 NPEYVLDINENEVIISTWQGKTFNYPHRNN 422
>gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes]
Length = 410
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 4/287 (1%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
I E + Y ++TP A+L++P +P P+ +Q +P EL DP+GD +
Sbjct: 57 IAETAGKYRWSVTPYYASLMDPDDPGCPVRQQAVPALGELMEFSGAEVDPVGDMYYRRTN 116
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---SKDTEAALAYIQEKSQI 144
+VH+YPDR+++ + CPVYCR C R+ GT +D L YI + +I
Sbjct: 117 RVVHKYPDRVIMLITEACPVYCRHCTRKFHTTDVDGTYFERNEGEDFSEDLRYIADHPEI 176
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ TGGDPL +L++++ LR I V+I+R SR P++ PQR+ PEL + L
Sbjct: 177 RDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEIIRIGSRFPVLLPQRVTPELCEMLARY- 235
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
PV++ H NHP E + E+ AI RL GI + +Q+VLL+GINDD + LM + +
Sbjct: 236 HPVWLNTHFNHPKEITPESERAIDRLLRHGIPVGNQTVLLRGINDDLGTMRRLMTELLRI 295
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
R++PYYL+H D G SHF ++E+G +I+ L+ I+G P Y+L
Sbjct: 296 RVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGLQGHITGFGVPQYVL 342
>gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
Length = 416
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+H+ +T + L + Q EI ++ Y A++P +L + NP DP+ Q
Sbjct: 71 WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E EDP+ + SP I RYPDR+++ + ++C +YCR C RR +G
Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +D AALAY++E +I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P RI L+ L + P+Y+ NHP E + EA A+ RL +AG+IL +Q
Sbjct: 248 GTRVPVTLPARITDHLVNILAKY-PPLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIN+ P I+ L + +++R++PYY+ H GT HF +I+EG ++ L+
Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366
Query: 301 ISGLCQPFYILDLPGGYGKV 320
SGL P YI++ P G GK+
Sbjct: 367 TSGLAVPTYIINAPKGGGKI 386
>gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 374
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 178/318 (55%), Gaps = 3/318 (0%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGDNNH 83
D K++S Y TP L + N DPI +Q +P ++E++ +E DP ++
Sbjct: 50 DVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQILPDEKEIDEKYQEGAFLDPFLEDEK 109
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ G+ HRYPDR+L + + C VYCR C R+ M + + ++ + YI+
Sbjct: 110 SPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RARTKQEYDVMFEYIKSNKA 168
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EV+ +GGDPL L +++++ ++K L I HV I+R SR + +P R E + + E
Sbjct: 169 IKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDIIRIGSRELVSNPFRFYDEELLEIFEK 228
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
V+I H NHP E + E A+ + + G +L+Q+VLLKGINDD + NLMR+ ++
Sbjct: 229 YDKVWIVTHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLKGINDDKYTMENLMRSLLK 288
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++IKPYYL H D G HF+ IE+G +I+ L+ ++SGL P + +DL G GKV +
Sbjct: 289 VKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHLRGRVSGLGNPTFAVDLVNGLGKVPLL 348
Query: 324 THNIKKVGNGSYCITDHH 341
+ NG Y ++
Sbjct: 349 PEYLISKKNGFYEFKNYQ 366
>gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8]
Length = 437
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 179/295 (60%), Gaps = 3/295 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
+++ + +++TP +LI+ + NDPI Q P EL I + +D + ++ SP+
Sbjct: 58 EKVLEKFPLSITPYYLSLIDYDDYKNDPIFIQAFPDPRELVISKYDIKDSLAEDKDSPVP 117
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
GI HRYPDR+L + ++C +YCR C R+ VG ++ + + + YI+ +I +V
Sbjct: 118 GITHRYPDRVLFLISNICSMYCRHCTRKRRVGDVD-SIPNRSEILKGIEYIKNTPEIRDV 176
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ +GGDPL+LS L +L L+ I HV+++R +RVP V P RI +L+ LK+ P+
Sbjct: 177 LLSGGDPLMLSDSYLDWILTELQTIPHVEVIRIGTRVPAVLPYRITDDLVNMLKKH-HPL 235
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+I NHP E + + A+ LA+AGI L +QSVLL G+ND P ++ L++ V+ R++
Sbjct: 236 WINTQFNHPREVTTSSREALRMLADAGIPLGNQSVLLAGVNDCPILMKRLVQRLVQNRVR 295
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYYL+ DL+ G +HFR + +G +I+ SL SG P Y++D PGG GK++I
Sbjct: 296 PYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFAVPSYVIDAPGGGGKIRI 350
>gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon]
Length = 515
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 12/296 (4%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86
+++ Y + + P +LI D I +Q +P EL E+ E DP+ ++ SP+
Sbjct: 34 KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEDKDSPV 87
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E I +
Sbjct: 88 SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KKEQVLQGIEYIREHEAIRD 146
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V+ +GGDPL+L+ + L L+ L+ IKHV +LR +RVP PQRI L+ L+ P
Sbjct: 147 VLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCALPQRITDGLLSLLRRY-HP 205
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +R+
Sbjct: 206 LYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I
Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%)
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP+++ L+ ++LR
Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKELVHGLLKLR 446
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+KPYYLH + EEG I+ SL+ SG+ P I+
Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481
>gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47]
Length = 381
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 165/280 (58%), Gaps = 2/280 (0%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + P +PNDP+ RQ +P EE N DP+GD + + G++H+Y R L
Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C ++CR+CFRRE S+ + E AL Y++E I EV+ +GGDPL L+ +
Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
K+++ + I HV+ LR+H+R+PIV P R+ I+ ++ + ++ +H NHP E E
Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSE 281
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
AA+ RL +AGI +L+Q+VLL+G+NDD ++L +L R ++LR+ PYYLH D G +H
Sbjct: 282 TGAALMRLVDAGIPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
F + E G+ +V+ L+ ++ G P ++ + G K ++
Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381
>gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
Length = 304
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 168/278 (60%), Gaps = 9/278 (3%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
I QF K EL +DP+G+ HS KG++HRY DR++L + + C YCRFCFR+
Sbjct: 18 IKSQFCFSKGEL--FLNGNKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
S +G L E ++ Y+++ + EV+ +GGDP LS+K+L ++L +R IKH+
Sbjct: 76 NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+R SRV P RI+ + + LK KP++IA H NHP E ++E + L ++GI
Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++SQ+VLLK IND+ L L + V++ IKPYYL D A G FR++I++ ++
Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IKKVGN 332
L+ KISGLC P + DLP GYGKV ++ + IK+ GN
Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGN 287
>gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 402
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 170/292 (58%), Gaps = 4/292 (1%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
++ TP +L +P +PN PI R +P KEE EE DP+ + SP++G+ H YP+R
Sbjct: 61 VSTTPYYLSLSDPSDPNCPIRRMIVPTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNR 120
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL H C VYCR C R V S + + S D E+A YI+ +I +V+ +GGDPL
Sbjct: 121 VLLFSNHSCSVYCRHCMRGRKVSSNEERMEKS-DLESAFDYIRNHPEIEDVVVSGGDPLN 179
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213
L+ R++ +LK L I HV+I R +R P+ P RI + Q +++ ++
Sbjct: 180 LADLRIEWILKELNQIPHVKICRLGTRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQF 239
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E ++E AI +L G+ + +Q+VLLKGINDD E + L + +E+R++ YYL+
Sbjct: 240 NHPKECTKETKEAILKLLKVGVSVGNQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYD 299
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
P+L G+ FR + G +IV ++ KI G+ P ++ DLPGG GK+ I +
Sbjct: 300 PELIPGSRGFRTPLARGIEIVEYMRGKIGGMGIPQFVNDLPGGGGKITIGAN 351
>gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 339
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 180/328 (54%), Gaps = 9/328 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQI--DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q+R++ + Q A L+K+ I ++ + Y ++TP +LI +P+DPI Q
Sbjct: 12 QVRNRIRSGRQ---LAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQ 68
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E++ +DP+ ++ P+ G++HRY DR L+ C +YCR C R+
Sbjct: 69 CVPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKR--- 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
K A + Y+ I EVI +GGDPL L K L + L LR I HV++LR
Sbjct: 126 RWKAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLR 185
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SR+P+V P RI L++ L++ +P++ N P E + E+ A RL +AGI + +
Sbjct: 186 IGSRIPVVLPMRITVPLVRILRKH-RPLWFNTQFNSPREITPESAEACERLVDAGIPVSN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGINDD E + L+ + ++PYYL D G HFR+ +G +++ +
Sbjct: 245 QSVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISR 304
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNI 327
+ SGLC P Y++D+PGG GK+ + T ++
Sbjct: 305 QTSGLCLPRYVIDVPGGKGKMSLQTFSL 332
>gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
Length = 357
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 178/309 (57%), Gaps = 14/309 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P + RQ++P EE N+LP E DP+G + + +VH+Y +R+LL C YCR
Sbjct: 47 SPFYALRRQYVPSIEEKNVLPCELSDPLGAHRYQITPRLVHQYKNRVLLLTTARCFAYCR 106
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
CFRR ++G + ++ EA AY+ ++ E++F+GGDPL S+ L+++++ +R
Sbjct: 107 HCFRRTYTSRKQGFITDAECGEAC-AYLSSHPEVQEILFSGGDPLTASNDALRQLIRRVR 165
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAA 226
+ ++R +R PI +P+R + ELI KE P+++ H NHP E FS E+ A
Sbjct: 166 RARPGILIRICTRAPIAEPERFDSELIALFKE-NAPLWVIPHVNHPAEISNRFSPESYRA 224
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+S L +AGI + SQ+VLL+G+ND +LA L + IKP YL DLA GTSH R+
Sbjct: 225 LSGLVSAGIPVQSQTVLLRGVNDSVPVLAQLFHELTCMGIKPGYLFQGDLAPGTSHLRVP 284
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV---KIDTH----NIKKVGNGSYCITD 339
I EG K+ L+ ++SGL P Y +DLPGG GK+ ++D + + GN Y TD
Sbjct: 285 IREGVKLYERLRGELSGLSTPVYAVDLPGGGGKINLLQLDPELLRTGVSQNGN-DYLFTD 343
Query: 340 HHNIVHDYP 348
+ YP
Sbjct: 344 ANGNGWTYP 352
>gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
Length = 415
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 13/326 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ +TS L + + + + I ++ Y A++P +L+ P P+ PI RQ
Sbjct: 64 WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121
Query: 61 IPQKEEL----NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
+P EL +L DP+ + SP I RYPDR+++ + + C +YCR C RR
Sbjct: 122 LPSAAELEDNHGVL-----DPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRR 176
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+G + S ++ E AL YI++ +I +V+ TGGD L+LS + +L L I HV+
Sbjct: 177 NIGEVDRS-RSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVE 235
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
I R +RVP+ PQRI PEL + L + P+Y+ NHP E + A A RL AG++
Sbjct: 236 IKRLGTRVPVTMPQRITPELCRVLAK-HPPIYLNTQFNHPREVTAAAKEACDRLVQAGVV 294
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +Q+VLLKG+N+ P ++ L + +++R++PYY+ H GT+HF +IEEG +I+
Sbjct: 295 LGNQAVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDK 354
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
L+ SGL P YI++ P G GK I
Sbjct: 355 LRGYTSGLAVPTYIINAPHGLGKTPI 380
>gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR]
gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR]
Length = 448
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 182/328 (55%), Gaps = 3/328 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
++I++IK++ + A++P A+L++ +P+ P+ Q IP EL + ++DP+G+
Sbjct: 111 KEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQAIPSILEL-LDQSGKDDPMGEEF 169
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
SP I RYPDR+++ + + C +YCR C RR +G S + +AA+ YI+
Sbjct: 170 TSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGEVDRNKPRS-EIKAAIEYIRANP 228
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I +V+ TGGD L+LS+ L +L L I HV+I R +R + PQRI P+L + L E
Sbjct: 229 EIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRIGTRTLVSMPQRITPQLCEIL-E 287
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
P+YI NHP E + A +L AG +L +Q+VLL GIN++ ++ L +
Sbjct: 288 KHPPLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQAVLLNGINNNVHVMKKLNHELL 347
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++RI+PYY+ H GTSHF +EEG KI+ L+ SGL P YI++ P GYGK +
Sbjct: 348 KVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGYTSGLAVPTYIINAPKGYGKTPM 407
Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+ G I V YP K
Sbjct: 408 LPEYLISSGEDEIVIRTWEKKVISYPNK 435
>gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
Length = 381
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 164/280 (58%), Gaps = 2/280 (0%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + P +PNDP+ RQ +P EE N DP+GD + + G++H+Y R L
Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C ++CR+CFRRE S+ + E AL Y++E I EV+ +GGDPL L+ +
Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
K+++ + I HV+ LR+H+R+PIV P R+ I ++ + ++ +H NHP E E
Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSE 281
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
AA+ RL +AG+ +L+Q+VLL+G+NDD ++L +L R ++LR+ PYYLH D G +H
Sbjct: 282 TGAALMRLVDAGVPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
F + E G+ +V+ L+ ++ G P ++ + G K ++
Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381
>gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 437
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 184/304 (60%), Gaps = 3/304 (0%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78
K E+ D++K+ + +++TP +LI+ + NDPI Q P +EL+I ++ EDP+
Sbjct: 49 FKAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIFLQAFPSPKELDIDEDDLEDPL 108
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
++ SP++GI HRYPDR+L + + C +YCR C R+ VG ++ + L YI
Sbjct: 109 SEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRKVGDVD-SIPTRDAVSEGLEYI 167
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ + +V+ +GGDP +L L +L LR I HV+I+R +R+P+V P R+ +L++
Sbjct: 168 RNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEIIRIGTRMPVVLPYRVTDDLVE 227
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P++I H NHP E + + A+ +LA+AGI L +Q+VLL G+ND I+ +L+
Sbjct: 228 ILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPLGNQTVLLSGVNDCHRIMKSLV 286
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
V+ R++PYYL+ DL+ G SHFR + +G +I+ L SG P Y++D P G G
Sbjct: 287 HKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHLIGHTSGFAVPTYVIDAPHGGG 346
Query: 319 KVKI 322
K+ +
Sbjct: 347 KIPV 350
>gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
Length = 341
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 4/298 (1%)
Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
E++ + Y + L LI+P + NDPIARQ +P +EL L DP+ + P
Sbjct: 21 EMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADL-SSSYDPLAEEEQMP 79
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++HR+ DR++L C + CRFCFR R + LS + A+ Y+ +
Sbjct: 80 TPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTAHPAV 139
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
EV+ +GGDPL+L RL+ ++ + + +Q++R SR+P+V P+R+ E+ +
Sbjct: 140 KEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYFGSIP 199
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
++ A H NHP E + EA AA RL AG+ +++QSVLLKG+NDD E+L L R V +
Sbjct: 200 G-LWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRKLVAI 258
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
R+KP+YL H D G HF +E+G +I+ + + ++S L P + +DLP G GKV +
Sbjct: 259 RVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKVAL 316
>gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 420
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 173/290 (59%), Gaps = 4/290 (1%)
Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
+++ TP +L +P +P+DPI + IP++ E PEE DP+ + SP+KG+ H YPD
Sbjct: 67 NVSATPYYISLTDPEDPDDPIRKMIIPREAETVFSPEESPDPLHEERLSPVKGLTHMYPD 126
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+LL H C VYCR C R V K +++ +D EA YI+ +I +V+ +GGDPL
Sbjct: 127 RVLLFTNHECSVYCRHCMRGRKVSDSKERMIT-EDLEACFEYIEACPEITDVVLSGGDPL 185
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
LS ++ ++L+ L I+HV+I R +R P+ P RI +L ++ ++
Sbjct: 186 NLSDSKIDRILERLEKIEHVKICRLGTRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQ 245
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NH E + EA AI +L AG+ + +Q VLLKGIND EI+ L + +ELR++ YY++
Sbjct: 246 FNHAKECTSEAKEAILKLLKAGVNVGNQCVLLKGINDSGEIMLELHKKLLELRVRAYYMY 305
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
P+L G+ FR + +G +I++ ++ KI G+ P ++ DLPGG GKV +
Sbjct: 306 DPELIPGSRGFRTPLAKGIEIISYMRGKIGGMGIPQFVNDLPGGGGKVTL 355
>gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
Length = 423
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 181/324 (55%), Gaps = 9/324 (2%)
Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q+ H+ S +L+ N + Q +IK + Y A++P A+L+ +DPI
Sbjct: 75 WQMSHRISDSGALAELFGFNEM---QCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRL 131
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EELN DP+ + SP + RYPDR+++ + + C +YCR C RR +
Sbjct: 132 QSVPSIEELN--ETGHPDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNI 189
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + + AAL YI++ +I +V+ TGGD L+LS ++ +L L IKHV+I
Sbjct: 190 G-EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIK 248
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R + PQRI PEL LK+ P+Y+ NHP E + E+ A LA AG++L
Sbjct: 249 RLGTRAIVTLPQRITPELCDVLKKH-PPIYVNTQFNHPREVTPESKQACDMLAEAGVVLG 307
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+N+DP ++ L + +++ ++PYY+ H GT HF ++EG I+ L+
Sbjct: 308 NQAVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLR 367
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
SGL P YI++ P GYGK +
Sbjct: 368 GYTSGLAVPTYIINAPNGYGKTPV 391
>gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 412
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 183/332 (55%), Gaps = 6/332 (1%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
NL + E+ EI+++ Y A++P A+L++P +P P+ +Q IP +E+ DP
Sbjct: 80 NLTESER-QEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQSIPSAQEVKD-KAGVTDP 137
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALA 136
+ + +P + RYPDR+++ + + C +YCR C R+ +G + KD E ++
Sbjct: 138 MAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIGEVDKP--TPKDVLEESIE 195
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
Y++ ++I +V+ TGGD +LS + L +L LR I HV+I+R SR P+ PQRI L
Sbjct: 196 YVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRLGSRTPVTMPQRITQNL 255
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
L + P+Y+ NHP E + EA A +LA AG+ L +Q+VLL IN+DP ++
Sbjct: 256 CDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQAVLLNTINNDPHVMKT 314
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L ++ ++PYY+ H GT+HF +E+G +I+ ++ SG+ P YI++ P G
Sbjct: 315 LCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGYTSGMAIPSYIINAPDG 374
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+GK I + G I N V +YP
Sbjct: 375 HGKTPIVPEYMISQGRDKVYIRTWENRVFEYP 406
>gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
Length = 424
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 183/330 (55%), Gaps = 7/330 (2%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ +E+ + IK++ Y ++P A+LI+ N N P+ Q +P ELN E DP+G
Sbjct: 85 LSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQCVPTLFELN--DEGTLDPMG 141
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
+ SP I RYPDR+++ + ++C +CR C RR +G K +S D E ++ YI
Sbjct: 142 EEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGIVDKHQSIS--DLEESIEYI 199
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ +I +V+ TGG+PL+LS + +L L IK ++ +R +RV PQRI L+
Sbjct: 200 RNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRIGTRVLATLPQRITANLLS 259
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P+YI NHP E + EA A +LAN GI L +Q+VLL GIN+D ++ L
Sbjct: 260 ILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQTVLLNGINNDKYVMRLLN 318
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ ++ RIKPYY+ H GT+HF +I++G +I+ L+ SG+ P YI++ P G G
Sbjct: 319 QELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGYTSGMAIPTYIINAPNGNG 378
Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
K I I G + I + DYP
Sbjct: 379 KTPILPQYIISRGKNNVKIRTWEGKIFDYP 408
>gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
Length = 336
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P KEEL P DP+GD + G++H+Y R+L C + CR
Sbjct: 66 NPHDPLLRQVLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR LS + +AA+ IQ+ I EVI +GGDPL+LS RL ++++ L
Sbjct: 126 YCFRRNF--PYADLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLD 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKH++ +R HSR+PIV P RI E I L ++ K + I +H NH E S+ IAA + L
Sbjct: 184 GIKHLKRIRIHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
N+GI L +QSVLL+G+ND+ E+L L I PYYLH D A GT HF ++ E
Sbjct: 244 KNSGITLFNQSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++ ++ + G P + + G K I
Sbjct: 304 LALMHQVQAALPGYLVPKLVKEQAGATSKQTI 335
>gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630]
gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26]
gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932]
gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255]
gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55]
gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34]
gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79]
gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile
QCD-32g58]
gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile]
gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
Length = 422
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+
Sbjct: 80 LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ PVYI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L
Sbjct: 257 MLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375
Query: 319 KV 320
K
Sbjct: 376 KT 377
>gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63]
gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
Length = 422
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+
Sbjct: 80 LTKKEK-EHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTYIELED-EQEDLDPM 137
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L
Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375
Query: 319 KV 320
K
Sbjct: 376 KT 377
>gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42]
Length = 422
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+
Sbjct: 80 LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L
Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375
Query: 319 KV 320
K
Sbjct: 376 KT 377
>gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 422
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 186/330 (56%), Gaps = 5/330 (1%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ ++I++IK++ + +++P LI+ +N PI IP E+ + DP+
Sbjct: 85 LDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMAIPHGYEIANTKGD-TDPMA 143
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138
+ +P I RYPDR+++ + + C +YCR C RR +G+ + +S++ + ++ YI
Sbjct: 144 EEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGTND--LHTSREVLQESIDYI 201
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
++ +I +V+ TGGD L LS+ L +L L I V +R SR + PQRI +LI
Sbjct: 202 RDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRLGSRTLVTMPQRITDKLIN 261
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
LK+ P++I H NHP E +EE+ AA RL+NAGI L +Q+VLL GIN++ ++ L
Sbjct: 262 ILKKY-PPIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQAVLLNGINNNKFVMRLLN 320
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
++ R++PYY+ H GTSHF ++++G +I+ L+ SG+ P YI++ PGG G
Sbjct: 321 HELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPGGKG 380
Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
K I + G+ S I V DYP
Sbjct: 381 KTPILPQYLISRGSHSIKIRTWDGEVIDYP 410
>gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
Length = 379
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 173/308 (56%), Gaps = 10/308 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I KE+ +++KEI+N + + NLIN +PNDPI + IP + ELN
Sbjct: 17 IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPNEGELNEYGSWDASDEA 76
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N P G H+Y LL + VC YCRFCFR+ + + +S D + YI
Sbjct: 77 ANYVVP--GCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVKEAMS--DVTPGIEYIA 132
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ +I V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S++P+ +P RI + EL+
Sbjct: 133 QTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 192
Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
++ P +Y+ H NHP E +EEA A L +AG+I+++Q+ +LKGINDDPE+L
Sbjct: 193 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 252
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A L+ + PYY AG S F LT+EE KIV K + SGL + ++ +
Sbjct: 253 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAKARTSGLGKRVRLV-MS 311
Query: 315 GGYGKVKI 322
GK++I
Sbjct: 312 HSSGKIEI 319
>gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
Length = 419
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 178/306 (58%), Gaps = 3/306 (0%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
IK++ Y A++P +L +PH+ DPI IP +EL P DP+G+ +P
Sbjct: 90 IKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLSIPTHKELED-PCLDLDPMGEEYTNPAG 148
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
I RYPDR+++ + + C +YCR C RR +G ++ S + ++ YI+E +I +V
Sbjct: 149 CITRRYPDRLIINVTNECAMYCRHCQRRRNIG-EEDVHRSREMILESIEYIRENEEIRDV 207
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGGD L LS + L+ ++K L+ I H+ +R +R + PQRI +L L++ P+
Sbjct: 208 LITGGDALCLSDEDLEWMIKQLKEISHIDYIRLGTRSLVTMPQRITDQLCSMLRKY-HPI 266
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
YI H NHP E ++ + AA +LA++GI+L +Q+VLL GIN++ I+ L ++ R++
Sbjct: 267 YINTHFNHPIEITKASKAACEKLADSGIVLGNQAVLLNGINNNKYIMRVLNHELLKCRVR 326
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYY+ H GT+HF +IE+G +I+ L+ SG+ P +I++ P G GK I + I
Sbjct: 327 PYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGYTSGMAIPTFIVNAPKGQGKTPIFPNYI 386
Query: 328 KKVGNG 333
G G
Sbjct: 387 VSRGPG 392
>gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
Length = 378
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 176/308 (57%), Gaps = 10/308 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I KE+ +++K+I+N Y + NLIN +PNDPI + IP + ELN D
Sbjct: 16 IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGSW--DASD 73
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + + G H+Y LL + VC YCRFCFR+ + S +S D + YI
Sbjct: 74 EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ +I V+ TGGD LIL+ K+++++++ LR I HV+I+RF S++P+ +P RI + EL+
Sbjct: 132 QTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 191
Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
++ P +Y+ H NHP E +EEA A L +AG+I+++Q+ +LKGINDDPE+L
Sbjct: 192 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 251
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A L+ + PYY AG S F LT+E+ +IV K + SGL + ++ +
Sbjct: 252 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAKARTSGLGKRVRLV-MS 310
Query: 315 GGYGKVKI 322
GK++I
Sbjct: 311 HSSGKIEI 318
>gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 351
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 6/312 (1%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80
E+ + K++++ Y TP +L + I R P E++ I + EDP+ +
Sbjct: 27 EEKESFKKVTSIYPFLSTPYYLSL---AVKSCAIKRMIFPNIMEISEAIQSKGEEDPLSE 83
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+ HRYPDR+L+ + CP CRFC R+ +K +S + E AL YI++
Sbjct: 84 ERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRN-WKKKTFFISDTEIENALNYIRK 142
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I +V+ +GGDPL L +RL+K+L L+ I HV+++R +R P+ P R+ + + +
Sbjct: 143 NENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAPVTLPHRLLDDDLLEV 202
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E + V++ H NHP E +E + A+ L AGI + +Q+VLLKGIND +IL L R
Sbjct: 203 LEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLKGINDSADILEKLFRN 262
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+++++PYYL H D G HF +I +G KI+ L ++IS P+Y +D PGG GKV
Sbjct: 263 LQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFAIPYYAVDGPGGKGKV 322
Query: 321 KIDTHNIKKVGN 332
+I KK GN
Sbjct: 323 QILPDRYKKEGN 334
>gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
Length = 305
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 9/291 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + LTP +A+ + DPI RQF P EEL P DP+ + SP+ G+VH+Y
Sbjct: 18 FPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHKYQ 77
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTG 151
R LL L CPV+CR+CFRR G + S D +A + +Q + E+I +G
Sbjct: 78 GRALLHLTDACPVHCRYCFRRH------GAITSPMDPQAEQQLVDHLAQDHTLQEIILSG 131
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL+L+ + + L + H+Q +R HSRVP+ DP R+ +++ L+ K V + I
Sbjct: 132 GDPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVI 191
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NH E + + A+ AG ++L+QSVLL G+ND EILA L V L + PYYL
Sbjct: 192 HCNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYL 251
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G +HF ++ + +I+ L + + G P + + P GK I
Sbjct: 252 HLLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPI 302
>gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
Length = 348
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 152/269 (56%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +PNDP+ RQ +P E +P EDP+GD G++H+Y R+LL C
Sbjct: 73 MRPGDPNDPLLRQVLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACA 132
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + + +AAL YI I EVI +GGDPL LS +RL +
Sbjct: 133 VHCRYCFRRHFPYGEANP--ARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLA 190
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I HV+ LR HSR P++ P+R++ +L+ L+ + IHANH E A
Sbjct: 191 GALGEIPHVRRLRVHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREA 250
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++RLA AG+ LL+QSVLL+G+NDD + LA+L T + PYYLH D G SHF++
Sbjct: 251 LARLARAGVSLLNQSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVD 310
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ ++ L+ ++ G P + ++PG
Sbjct: 311 DDRALRLHHGLRARLPGYLVPRLVREIPG 339
>gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C R+ VG T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTRKRRVGDND-TIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C + VG K T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTSKRCVG-DKDTIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 357
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 163/283 (57%), Gaps = 14/283 (4%)
Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEE-------LNILPEEREDPIGDNNHSPLKGIV 90
TP A+L++P +P PI RQ +P +E + L + +G+ I
Sbjct: 40 GTTPYFASLMDPQDPACPIRRQVVPSLKEKENKYGIQDYLIHKENRAVGEKRPD---CIA 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+Y DRI + VC YCR CFR+E+V Q G L D + L +I+E ++ +V+ T
Sbjct: 97 RQYQDRIAFTVTDVCANYCRHCFRKELVVDQ-GLSLRF-DVDEGLGWIREHPEVRDVLIT 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYI 209
GGDP ILS ++L +++ LR I HVQ++RF +R PIV P RIN EL + L + + PV+I
Sbjct: 155 GGDPFILSDEKLGRIITELRRIPHVQMIRFGTRTPIVLPSRINKELCEILGDFHRVPVWI 214
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
NH E +EE + L G+ + +Q+VLLKGINDDP+ L + + +RI+PY
Sbjct: 215 NTQCNHAREITEETARGVYDLMRCGVNVGNQAVLLKGINDDPQSFRELHQKLLTVRIRPY 274
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311
Y+ + + A G HFR +E+G +++ +++ +GLCQP Y++
Sbjct: 275 YVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHTTGLCQPMYVI 317
>gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 358
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 24/317 (7%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S Q L + E+ I+ + + + TP A+L++ +PN PI RQ IP +E
Sbjct: 13 VDSVQKLEQYINVTDEERRTIESLDTKWGV--TPYFASLMDKDDPNCPIRRQVIPSMQE- 69
Query: 68 NILPEEREDPIGDNNHSPLK-----------GIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
+ + G +N+ K I +Y DRI ++ C +YCR CFR+E
Sbjct: 70 ------KVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKE 123
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+V Q + D + LA+I E +I +V+ TGGDPL+LS +L +++ LR I HV+
Sbjct: 124 LVVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVE 181
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
++R SR+PIV PQRI L + + K PV+I NHP E +EE A+ L + GI
Sbjct: 182 MIRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGI 241
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 242 NVGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIR 301
Query: 296 -SLKEKISGLCQPFYIL 311
+L+ +GL QP Y+L
Sbjct: 302 DALRGHTTGLAQPMYVL 318
>gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 429
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
+++ TP +L +P +PN PI + +P+++E PEE DP+ + SP+KG+ H YPD
Sbjct: 78 NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 137
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+LL H C VYCR C R V K +L ++D E YI+ +I +V+ +GGDPL
Sbjct: 138 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 196
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
LS ++ +L+ L I+HV+I R +R P+ P R+ +L ++ ++
Sbjct: 197 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 256
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NH E + EA AI +L AG+ + +Q VLLK +ND + + L + +ELR++ YY++
Sbjct: 257 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 316
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
P+L G+ FR + +G +I+ ++ KI G+ P ++ DLPGG GK+ +
Sbjct: 317 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 366
>gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 416
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
+++ TP +L +P +PN PI + +P+++E PEE DP+ + SP+KG+ H YPD
Sbjct: 65 NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 124
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+LL H C VYCR C R V K +L ++D E YI+ +I +V+ +GGDPL
Sbjct: 125 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 183
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
LS ++ +L+ L I+HV+I R +R P+ P R+ +L ++ ++
Sbjct: 184 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 243
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NH E + EA AI +L AG+ + +Q VLLK +ND + + L + +ELR++ YY++
Sbjct: 244 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 303
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
P+L G+ FR + +G +I+ ++ KI G+ P ++ DLPGG GK+ +
Sbjct: 304 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 353
>gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169]
gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1]
gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1]
gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1]
gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7]
gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1]
Length = 356
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C
Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I +
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ L E + G P + + P K ID
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337
>gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
Length = 388
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 18/306 (5%)
Query: 11 AQDLYNANLIKKEQIDE-----IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
AQ Y N+ K QI E +K+I+ + + NLI+ +NPNDPI + IP +
Sbjct: 2 AQPKYIMNIDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEG 61
Query: 66 ELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL EE R D ++ + G H+Y LL + VC YCR+CFR+ + +
Sbjct: 62 EL----EEYGRWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLFRNDIK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++ D + + YI+ QI V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S+
Sbjct: 118 EAMA--DVQPGIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSK 175
Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ +KE P +Y+ H NHP E +EEA L NAG I++
Sbjct: 176 MPVFNPMRIYEDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG + F LT+EE V + K
Sbjct: 236 NQTPVLKGINDDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAK 295
Query: 299 EKISGL 304
K SGL
Sbjct: 296 AKTSGL 301
>gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1]
gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8]
Length = 345
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C
Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I +
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ L E + G P + + P K ID
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337
>gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae]
Length = 340
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ RQ I K E N+ P DP+ ++ HSP+ G++H+Y DR+LL + C V CR
Sbjct: 67 DANDPLLRQVITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + ++ + AL YIQ +++ EVIF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEENKG---NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q + V + H NH E E A+ +
Sbjct: 183 ETIPHIKRLRIHSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQ 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+QSVLL+GIND+ + LA L E I PYYLH D G +HF +T EE
Sbjct: 243 LKQVNVTLLNQSVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ I+ L +ISG P ++ G K ID
Sbjct: 303 ARIIMKELLTRISGYLVPRLTREIGGKLSKTPID 336
>gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125]
gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125]
Length = 393
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 168/290 (57%), Gaps = 9/290 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I KE+ +++K+I++ + + +LI+ ++PNDPI + IP + EL+ R D
Sbjct: 16 IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPNEGELS--EYGRWDASD 73
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ + + G H+Y LL VC YCR+CFR+ + + +S D + L YI
Sbjct: 74 EDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVKEAMS--DVDPGLDYIA 131
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ QI V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI + +L+
Sbjct: 132 QTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSKLPVFNPMRITEDEQLL 191
Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ ++E P +YI H NHP E + EA A L +AG I+++Q+ +LKGINDDP++L
Sbjct: 192 ELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVVNQTPVLKGINDDPDVL 251
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
A L+ + PYY AG + F LT+EE IV K K SGL
Sbjct: 252 AELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAKAKTSGL 301
>gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72]
gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E]
Length = 356
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C
Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I +
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ L E + G P + + P K +D
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337
>gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
Length = 356
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C
Sbjct: 69 HDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I +
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ L E + G P + + P K +D
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337
>gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I P +P+DP+ RQ +P E + DP+ + H P G++H+Y +R+LL C
Sbjct: 82 IRPGDPDDPLLRQVLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACA 141
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ CR+CFRR ++ S E L Y+++ + I E IF+GGDPL +RL +
Sbjct: 142 INCRYCFRRHFPYAENSP--SRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLA 199
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L I H++ LR H+R+P+V P R++ L+ L + +H NHP E A
Sbjct: 200 ERLADIPHLKRLRLHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADA 259
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ RL AG+ LL+QSVLL+G+NDD E LA L E+ I PYYLH D G +HF +
Sbjct: 260 MQRLRGAGVTLLNQSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVP 319
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E +V +L+ +++G P + ++PG K +
Sbjct: 320 DAEAVSLVETLRTQLAGFLMPRLVREVPGEASKTPL 355
>gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
Length = 348
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 145/245 (59%), Gaps = 2/245 (0%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
DP+GD++ G+VH+Y R+LL C V+CR+CFRRE ++ S D A+
Sbjct: 100 DPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPYAEHNA--SQDDWAPAI 157
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
AYI + I EVI +GGDPL LS +RL +++ L I H++ LR H+R+P+V P+R++ +
Sbjct: 158 AYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLRIHTRLPVVLPERVDEQ 217
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
L+ L + + +HANHP EF++ A A++RL GI LL+Q+VLL GINDDP+ L
Sbjct: 218 LLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLNQAVLLAGINDDPDTLC 277
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L + PYYLH D GT+HF +T ++ +L ++ G P + ++PG
Sbjct: 278 ELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHARLPGYLVPRLVREIPG 337
Query: 316 GYGKV 320
GK
Sbjct: 338 EPGKT 342
>gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
Length = 335
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 6/288 (2%)
Query: 32 SNHYSIALTPV-IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S H + PV N I P + +DP+ +Q +P + E +P D +GD N GI+
Sbjct: 41 SAHLFPLMVPVSYLNRIEPGSLDDPLLKQILPVELENADIPGFETDAVGDLNVRATPGIL 100
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+Y R LL + C ++CR+CFRR + L+ D E +Q S + E+I +
Sbjct: 101 QKYHGRALLMVSGACAIHCRYCFRRHYPYGDEPRTLA--DWEPVWQSLQADSTVQEIILS 158
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPV 207
GGDPL+L+ RL + + + I HV+ LR HSR+P+V P RI+ E++ L E G
Sbjct: 159 GGDPLLLTDLRLNDLCERIAAIPHVKRLRIHSRLPVVLPDRIHAGLLEMLHGLTEQGTMP 218
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
++ IH NHP E + + AI ++ AGI +L+QSVLLKGIND E L L V L +
Sbjct: 219 WMVIHINHPNEIAPDVELAIKQMLQAGIPVLNQSVLLKGINDTAETLIELSEKLVNLGVI 278
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
PYYLH D G +HF + +G+K++ L+ ++ G P Y+ ++PG
Sbjct: 279 PYYLHQLDRVTGAAHFEVPQAQGRKLIEELRTRLPGYAVPQYVREIPG 326
>gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
Length = 368
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 172/292 (58%), Gaps = 10/292 (3%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
++++++ + + +T +LI+ ++ NDPI R IP +EL+ L E D G++ ++
Sbjct: 29 EKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPDELSCL-EGDYDTSGEHENTK 87
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++G+ H+Y + L+ + C VYCR+CFR+ MVG + V+ D A+ YI+E ++
Sbjct: 88 MRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEVIRRLDR--AVKYIEEHEEVT 145
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----PELIQCLK 201
V+ +GGDP +L +K +++ L L I H+ +RF SRVP+ P R+N PE++
Sbjct: 146 NVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVPVTFPMRLNDDDLPEILGEFA 205
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E K +Y+ H NHP EF+EE+ AI RL + GI++ +Q+VLLKG+NDDP LA L R
Sbjct: 206 EL-KRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAVLLKGVNDDPYTLAELHRLL 264
Query: 262 VELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311
V I PYY+ + F++ ++EG KIV K + G + F YI+
Sbjct: 265 VRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAMLDGHSKRFRYIM 316
>gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
Length = 350
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 2/273 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ +P +E L DP+ + + G++ +Y R LL + C + CR
Sbjct: 78 NPNDPLLRQVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCR 137
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ L +D + L + +I EVIF+GGDPL + K L + K L
Sbjct: 138 YCFRRHFPYDEQR--LKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALE 195
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR H+R+P+V PQR+ L+Q ++ V + +H NHP E + + A+ RL
Sbjct: 196 QIPHLRRLRIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRL 255
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSV+L+G+ND ++L L + + PYYLH D AG HF + E
Sbjct: 256 TEAGVTLLNQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEA 315
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ + L E++ G P + +LPG K +D
Sbjct: 316 KALTRELLERLPGFLVPRLVRELPGAGSKTPLD 348
>gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
Length = 341
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILP 71
A L++ +DE K + + L P+ A+L+ NPNDP+ Q +P +E P
Sbjct: 28 AKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDEFLTSP 87
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
EDP+ +++ + KGI+H+Y R+LL + C V CR+CFRR +S
Sbjct: 88 GYSEDPLEEHD-TAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHF--PYADNAVSKHQW 144
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E L YIQ I EVIF+GGDPL+ L + + I HV+ LR H+R+P+V P+R
Sbjct: 145 EEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPVVLPER 204
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
IN + + +HANH E SE + + L G+ LL+QSVLLKG+ND
Sbjct: 205 INNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKGVNDSG 264
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
E +++L E + PYYLH D G SHF ++ +EG+ I+ +++ G P +
Sbjct: 265 EAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLVPKLVR 324
Query: 312 DLPGGYGKVKIDTH 325
++ G GK ID H
Sbjct: 325 EIGGQPGKTPIDLH 338
>gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
Length = 498
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 23/305 (7%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
++ +TP I + IN HNP +DPIARQF+P K + +P+ + D + + SP+KG+VH
Sbjct: 148 AVRMTPYILSRINWHNPRHDPIARQFLPLKSRM--IPDHPKLTLDSLHEEADSPVKGLVH 205
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
RYPD+ L VCP YC FC R VG+ TV + + + ALAYI + Q+
Sbjct: 206 RYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQPQLQ 265
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELI 197
+++ +GGD L ++L+++ + L I H++ RF S+ V P R+ L+
Sbjct: 266 DIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTDALV 325
Query: 198 QC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ + AGK V H NHP E S AA RL G+++ +QSVLL+G+NDD E +
Sbjct: 326 RVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDVETM 385
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
L+R I PYY++ D+ H R + + A L+ I+G P +++DLP
Sbjct: 386 GALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVVDLP 445
Query: 315 GGYGK 319
GG GK
Sbjct: 446 GGGGK 450
>gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8]
gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 368
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 168/291 (57%), Gaps = 13/291 (4%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
E+ + +K + Y +LI+ +P+DPI + +P+++EL EE D +
Sbjct: 21 EERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 76
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+
Sbjct: 77 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 134
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
+I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L++
Sbjct: 135 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIGSKIPAFNPYRIIDDPDLLK 194
Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L
Sbjct: 195 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAVLCNQTPLLRGINDDPEVLG 254
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L+ + + PYY+ +G F + IEEG +I ISG+ +
Sbjct: 255 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 305
>gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
Length = 572
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I P +P+DP+ RQ +P EE + P DP+ + H+P +G++H+Y R+LL C
Sbjct: 299 IRPGDPHDPLLRQVLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACA 358
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ CR+CFRR + S L Y++ + I E I +GGDPL + ++L ++
Sbjct: 359 INCRYCFRRHFPYDENAP--SRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLV 416
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L I H++ LR H+R+P+V P RI+ L+ L + +H NHP E E I A
Sbjct: 417 EQLEAIPHLKRLRIHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDA 476
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
RL +AG+ LL+QSVLL GINDD + L L E + PYYLH D G +HF +
Sbjct: 477 CRRLRDAGVTLLNQSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEID 536
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + +V +++ ++ G P + ++PG K I
Sbjct: 537 DDTARTLVDAMRRELPGFLMPTLVREIPGEASKTPI 572
>gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
Length = 337
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 6/298 (2%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG--DNN 82
+D ++ S+ +S+ + + I P NP DP+ RQ +P +EL + DP+ D N
Sbjct: 41 LDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQVLPLNDELADVSGFVADPLAEMDAN 100
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS G++H+Y R+LL L C + CR+CFRR + L S+ + L Y++
Sbjct: 101 HS--DGLIHKYKGRVLLILSGACAINCRYCFRRHF--PYQENRLGSEQWQQVLNYLKSDP 156
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I EVIF+GGDPL S RL+++++ L I H+ LR HSR+PIV PQR+ L+Q L++
Sbjct: 157 TISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLRIHSRLPIVIPQRVTDRLLQILRD 216
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + +HANHP E + R+ ++ I +L+Q+VLLKGIND ++L L
Sbjct: 217 SRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLNQAVLLKGINDQVDVLQQLSEKLF 276
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E I PYYL D G +HF + EE K+ ++ + G P ++PG K
Sbjct: 277 EQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQAVLPGYLVPKLAREIPGKTEKT 334
>gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
Length = 343
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 143/270 (52%), Gaps = 2/270 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ Q +PQ E + DP+GD N G++H+Y R+LL C ++CR+C
Sbjct: 76 DDPLLLQALPQAVEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYC 135
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRRE Q S + +L YI S I EVI +GGDPL LS KRL K++ + I
Sbjct: 136 FRREYPYEQASATQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETI 193
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
HVQ LR HSR+PIV P R+ L Q L ++ + +HANH E A+ L
Sbjct: 194 SHVQRLRIHSRLPIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRR 253
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG+ L+Q+VLL GIND E LA L E PYYLH D G +HF + +
Sbjct: 254 AGVDCLNQAVLLAGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKH 313
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+VA L+E++SG P + ++ G K +
Sbjct: 314 LVAQLRERLSGYLVPTLVREIEGESSKTPL 343
>gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila
RKU-1]
gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1]
Length = 365
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
E+ + +K I Y +LI+ +P+DPI + +P+++EL EE D +
Sbjct: 18 EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+
Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
+I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +PEL++
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIRIGSKIPAFNPYRIIDDPELLR 191
Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+++ K +Y+ NHP E +EEAI A++ L +AG +L +Q+ LL+GIND PE L
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLG 251
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L+ + + PYY+ +G F + IEEG +I ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302
>gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
Length = 365
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
E+ + +K I Y +LI+ +P+DPI + +P+++EL EE D +
Sbjct: 18 EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+
Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 131
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
+I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L+
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191
Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L+ + + PYY+ +G F + IEEG +I ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302
>gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
Length = 335
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 170/313 (54%), Gaps = 4/313 (1%)
Query: 11 AQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
+ +L A + + +D I E + +A P +A + NP DP+ Q + +EE+
Sbjct: 25 SAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARM-EYGNPKDPLLLQVLALQEEIAP 83
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + +P+ GI+H+Y R+LL C V CR+CFRR +Q +L+
Sbjct: 84 NAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRHNDYAQN--ILTPA 141
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
AL Y++ + I EVI +GGDPL+ S ++L +++ L I H+Q LR H+R+PIV P
Sbjct: 142 RLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLRIHTRLPIVIP 201
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
QRI EL Q L ++ V + +H NHP E E A+++L GI LL+Q+VLLK IN+
Sbjct: 202 QRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLNQTVLLKNINN 261
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
L L ++ + PYYLH D G +HF + + +++ +L+ ++ G P
Sbjct: 262 CAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQARLPGYLVPKL 321
Query: 310 ILDLPGGYGKVKI 322
+ ++PGG K I
Sbjct: 322 VSEIPGGASKTLI 334
>gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
Length = 327
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 172/323 (53%), Gaps = 8/323 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHNPNDPIARQF 60
Q++ + T+ + L A+ ++ ++ + + N + P+ +A I N NDPI RQF
Sbjct: 12 QIQRQNFTNWEKL--ADFLELDEFHRQEIMKNPRFVLNLPIRLAKKIEKGNLNDPILRQF 69
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ DP+GD+ ++H+Y R+LL C ++CR+CFR+
Sbjct: 70 LPMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNF--- 126
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ K + L I + I EVI +GGDPL LS++ L +L+ + I H+ LRF
Sbjct: 127 --DYEVEDKTFDEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRF 184
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR PI P+RI+ E ++ + V+ IH NHP E ++ ++ L G+ +L+Q
Sbjct: 185 HSRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQ 244
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+NDD + LA L T + I PYYLH D G SHF ++ EEG +++ L +
Sbjct: 245 AVLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRR 304
Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
+ G P Y+ ++ G K ++
Sbjct: 305 LPGYAVPKYVQEIAGEPSKTPLN 327
>gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 370
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 36/357 (10%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--RED 76
L +KE+ E+K+++ Y +LIN +PNDPI + IPQ EEL EE + D
Sbjct: 15 LTEKEK-QELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEEL----EEWGKLD 69
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ +++ KG+ H+Y D LL + VC +CRFCFR+ + + V ++D L
Sbjct: 70 ASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEV--ARDVTEDLE 127
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NP 194
YI++ +I V+ TGGDPL+LS K+L+K++ +R I+HVQI+R S++ +P RI +P
Sbjct: 128 YIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRIIEDP 187
Query: 195 ELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
ELI+ +K+ K +YI NHP E +E+AI A++ L AG IL +Q+ L+KG+NDD
Sbjct: 188 ELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVNDDW 247
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ L L + + + PYY+ AG F + +EEG +I +SGL +
Sbjct: 248 KTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRAR-F 306
Query: 312 DLPGGYGKVKID-------------THNIKKVGN--------GSYCITDHHNIVHDY 347
+ GK+++ HN K G +Y D++ +V +Y
Sbjct: 307 AMSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363
>gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
Length = 345
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 9/317 (2%)
Query: 39 LTPVIANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
++P LI P A RQ + E + EER DP+G+ + +VH+YP+R
Sbjct: 30 VSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVHQYPNR 89
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL C YCR+CFRRE G LS +Y++ ++ E++ +GGDP+
Sbjct: 90 VLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSGGDPMS 148
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ +L+ LR + ++R +R P+ P+ I L+ +P+++ H NHP
Sbjct: 149 GGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFIMLLRSV-RPLWVIAHINHP 207
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + A++R ++GI + +Q+VLL+G+ND+P +LA L V + +KP YL DL
Sbjct: 208 AELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYLFQTDL 267
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKKVG 331
A GT+HFR+ +E+ I L+ ++SGL P + +DLP G GK + I +
Sbjct: 268 ARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDIISPLQ 327
Query: 332 NGSYCITDHHNIVHDYP 348
+G + ++ YP
Sbjct: 328 DGRFSARGIDGKIYTYP 344
>gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2]
gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 363
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 3/275 (1%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
L+ NP+DP+ RQ + +E+ P DP+ + H+ + G++H+Y R LL + C
Sbjct: 88 LMERGNPHDPLLRQVLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGAC 147
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V+CR+CFRR T LS K + AL ++ + I EVI +GGDPL LS++RL+++
Sbjct: 148 AVHCRYCFRRHF---PYQTHLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQL 204
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L I H++ LR HSR P+V P+R+ L L + +H NHP E S +
Sbjct: 205 LDALESIPHLRRLRIHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVE 264
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
L +AGI LL+QSVLL G+ND + LA L + + PYYLH D G +HF +
Sbjct: 265 RCRDLRSAGITLLNQSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAV 324
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ E ++I A+L+ ++ G P + PG K
Sbjct: 325 SDEAAREIHAALRARLPGFLVPRLTREEPGEPAKT 359
>gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402]
Length = 338
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 166/318 (52%), Gaps = 9/318 (2%)
Query: 37 IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ ++ LI P D A Q P E + E DP+G+ + +VH+Y
Sbjct: 21 VLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R+LL C YCR+CFRR + S+ + + + + YI++ Q+ E++ +GGDP
Sbjct: 81 NRVLLITTGKCLSYCRYCFRRGLT-SRSQSYIGDGELKEVTDYIKKMPQVTEILVSGGDP 139
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L K+L+KVL LR IK ++R +R PI P+ EL+ LK+ KP+++ H N
Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E E A++ AGI + SQ+VLLKG+ND+ + L L + IKP YL
Sbjct: 199 HPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329
D AAGTSHFR+ ++E + + K+SGL +P + DLPGG GK + I++
Sbjct: 259 DPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAADLPGGGGKFSLSALIYSKKIIEQ 318
Query: 330 VGNGSYCITDHHNIVHDY 347
+ S+ ++H Y
Sbjct: 319 KEDSSFSALGADGVIHKY 336
>gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901]
gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901]
Length = 335
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T DL + + + + + + + + ++ + + P +PNDP+ Q +P EE
Sbjct: 22 ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVLPLGEEF 81
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ P EDP+ + +P G++H+Y R+LL C + CR+CFRR Q S
Sbjct: 82 AVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHFDYRQNTP--S 139
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +AALAYI+ + +I EVI +GGDPL+L K+L+ +L + I H+ +R HSR+P+V
Sbjct: 140 RTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIHSRLPVV 199
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P R L++ L + + H NH E + A L AGI LL+Q+VLLK I
Sbjct: 200 LPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQTVLLKNI 259
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND IL L + + + PYYLH D +GT+H+ + + +++ L ++ G P
Sbjct: 260 NDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQLPGYLVP 319
Query: 308 FYILDLPGGYGKVKI 322
+ + PG K I
Sbjct: 320 TLVKEEPGAPSKTPI 334
>gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
Length = 365
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 166/291 (57%), Gaps = 13/291 (4%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
E+ +K + Y +LI+ +P+DPI + +P+++EL EE D +
Sbjct: 18 EERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 73
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+
Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
+I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L+
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191
Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L+ + + PYY+ +G F + IEEG +I ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302
>gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405]
gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC
35405]
Length = 338
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 168/318 (52%), Gaps = 9/318 (2%)
Query: 37 IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ ++ LI P D A Q P E + E DP+G+ + +VH+Y
Sbjct: 21 VLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R+LL C YCR+CFRR + + + + + +A YI++ Q+ E++ +GGDP
Sbjct: 81 NRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELKAVTDYIKKMPQVTEILVSGGDP 139
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L K+L+KVL LR IK ++R +R PI P+ EL+ LK+ KP+++ H N
Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E +E A++ AGI + SQ+VLLKG+ND+ + L L + IKP YL
Sbjct: 199 HPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329
D AAGTSHFR+ ++E + ++ K+SGL +P + +DLP G GK + I++
Sbjct: 259 DPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVDLPEGGGKFSLSALIYSKKIIEQ 318
Query: 330 VGNGSYCITDHHNIVHDY 347
+ S+ ++H Y
Sbjct: 319 KEDSSFSALGADGVIHKY 336
>gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
Length = 345
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 168/321 (52%), Gaps = 3/321 (0%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
SAQDL + E ++ + + + I + + I P NP DP+ Q P E
Sbjct: 27 SAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQIWPFSAEGET 86
Query: 70 LPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
P DP+ +N +P+ GIVH+Y R+LL + C ++CR+CFRR + LS
Sbjct: 87 PPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHF--PYEDNNLSL 144
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ E AL YI+ I EVI +GGDPL + KRL K++ + I HV LR HSR+PI
Sbjct: 145 SEWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRLRIHSRLPITL 204
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P RI P+L Q L + + + +HANH E S++ +A++RL + I LL+Q+VLLKGIN
Sbjct: 205 PNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLLNQTVLLKGIN 264
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D + L +L + PYYLH D G H+ + + ++ L+ ++ G P
Sbjct: 265 DTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQAQLPGFLVPK 324
Query: 309 YILDLPGGYGKVKIDTHNIKK 329
+ ++PG K I T K
Sbjct: 325 LVREVPGEASKTLIYTQKPPK 345
>gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
Length = 323
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 166/308 (53%), Gaps = 7/308 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+H +T+ + L + + + I + +T A L++ NP+DP+ + I
Sbjct: 5 RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64
Query: 62 PQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EEL P++ I + + P++GI+HRYP ++LL C +CRFCFR E V
Sbjct: 65 PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKVA 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S L + + A+ Y+++ I +VIFTGGDP+ + +RL+ L +R I HV+I+R
Sbjct: 125 S----TLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R PI P+ ELI+ L KP+ + HP E S+E + + RL++AGI+LL
Sbjct: 181 ITTRAPIFAPEIFTDELIRMLS-WFKPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q +LKGINDD + L L V+ R PYY ++ G HF L E +K++ L+
Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299
Query: 300 KISGLCQP 307
SG C P
Sbjct: 300 TTSGFCIP 307
>gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 346
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 161/294 (54%), Gaps = 2/294 (0%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+ SN + + + N + P P+DP+ RQ +P ++EL D +GD+ G
Sbjct: 55 RSASNDFPLLVPESFLNRMQPGEPDDPLLRQILPVEQELQPKQGFTTDAVGDDAARIAPG 114
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++ +Y R L+ L C V+CR+CFRR + S + + L I ++ + E++
Sbjct: 115 LLQKYHGRALMITLGTCAVHCRYCFRRHYPYHDEPR--SREQWQETLNVIADRPDLEEIL 172
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+L+ +RL +++ L I H+Q LR H+R+PIV P R+ + + L++
Sbjct: 173 LSGGDPLVLNDRRLGELIDDLAKIPHLQRLRIHTRLPIVLPDRVTEQFLSLLQDTRLQPV 232
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ +HANHP E + A++ RL+ AG +L+Q+VLL+G+ND + A L R + + P
Sbjct: 233 VVVHANHPAEVVADCAASLKRLSRAGFPVLNQAVLLRGVNDTVDTQAELCRRLINAGVLP 292
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
YYLH D G +HF G+ IV +LKE++ G P ++ ++ G K ++
Sbjct: 293 YYLHQLDRIQGAAHFETDAALGKAIVQALKERLPGYAVPRFVREIAGEPSKTEM 346
>gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
Length = 335
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR
Sbjct: 65 DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + AL YI + I EVI +GGDPL L+ RL ++ +TL
Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I HV+ LR H+R+P+V P+R++ L+Q L+E + IHANH E + AA++ L
Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDL 242
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
++ G L +Q+VLL+GIND L++L + + PYYLH D G +HF + +
Sbjct: 243 SHVGCRLFNQTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSA 302
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
Q++ +L+ ++ G P + + G K+
Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332
>gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath]
gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus
str. Bath]
Length = 323
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 2/286 (0%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E + + + A + P +P DP+ RQ +P +EL DP+GD + G+
Sbjct: 32 EAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPGL 91
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y R LL C V+CR+CFRRE + + + + +AAL YI ++ E+I
Sbjct: 92 LHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEIIL 149
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+LS RL ++ K L I H++ LR HSRVP+V P RI+ L++ L +
Sbjct: 150 SGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTVV 209
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
IHANHP E E ++ ++ + AG+ LL+QSVLL+ +ND L L E + PY
Sbjct: 210 VIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLPY 269
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
YLH D GT+HF + E + + +L+ ++ G P + ++ G
Sbjct: 270 YLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEG 315
>gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 365
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 174/324 (53%), Gaps = 26/324 (8%)
Query: 7 TLTSAQDLYN-ANLIKK-EQ----IDEIKEI--SNHYSIALTPVIANLINPHNPNDPIAR 58
T T Q L N N I++ EQ D+ ++I N + TP A+L++ +P PI +
Sbjct: 9 TQTWQQQLANFVNTIERLEQYVNLTDDERQILEQNKTTWGTTPYFASLMDADDPQCPIRK 68
Query: 59 QFIPQKEELN---------ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
Q IP E + E R D I +Y DR+ + C +YC
Sbjct: 69 QVIPSSLEQQNTYGMDDYLMWKENR-----DTEEQRPDSIARQYKDRVAFTVTQTCGIYC 123
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R CFR+E+V G + + + L +I + ++ +V+ TGGDPL+L +++ +++ L
Sbjct: 124 RHCFRKELVVD--GDLTFDFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERL 181
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAIS 228
R I H+Q++RF SRVPIV PQRI PEL L K P+++ NHP E +E A+
Sbjct: 182 RAIPHIQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVY 241
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
L G+ + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E
Sbjct: 242 DLMTCGVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVE 301
Query: 289 EGQKIVA-SLKEKISGLCQPFYIL 311
+G +++ +L+ +GL QP Y++
Sbjct: 302 KGAELIRDALRGHTTGLAQPMYVV 325
>gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
Length = 363
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 175/303 (57%), Gaps = 14/303 (4%)
Query: 24 QIDEIKEIS----NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
QI+E +I+ N Y +++ +L+NP + NDPI + IP E+++ D G
Sbjct: 23 QINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEMDL--AGTFDTSG 80
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+++++ L+G+ H+YP +L+ + C +YCR+CFR+ MVGS GT D + A++YI
Sbjct: 81 ESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGS--GTQEVVADIKEAISYIL 138
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ +I V+ +GGD +L +++ L +L I H+ +RF ++ P+V PQRI + L
Sbjct: 139 KHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVVFPQRILEDSRLQ 198
Query: 198 QCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
L+E G K +YI NHP E +E++I+A+ L G+I+ +Q+VLLKG+ND PE LA
Sbjct: 199 DILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVLLKGVNDCPETLA 258
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDL 313
L R F EL I PYY+ G + F++ ++ G I+ K +G + F ++L
Sbjct: 259 RLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQNGNGKCFRFVLSN 318
Query: 314 PGG 316
P G
Sbjct: 319 PDG 321
>gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707]
gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27]
gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707]
gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27]
Length = 335
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR
Sbjct: 65 DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + AL YI + I EVI +GGDPL L+ RL ++ +TL
Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I HV+ LR H+R+P+V P+R++ L+Q L+ + IHANH E + AA++ L
Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDL 242
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ AG L +Q+VLL+GIND L++L + + PYYLH D G +HF + I
Sbjct: 243 SRAGCRLFNQTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITA 302
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
Q++ +L+ ++ G P + + G K+
Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332
>gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
ATCC 27126]
Length = 341
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 157/283 (55%), Gaps = 3/283 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
+L+ NPNDP+ Q +P +E P EDP+ D + + KGI+H+Y R+LL +
Sbjct: 59 FVDLMEKENPNDPLFLQVMPLSDEFLTSPGYSEDPL-DEHDTAGKGILHKYDSRVLLMVR 117
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C V CR+CFRR + +S L Y++ ++I EVIF+GGDPL+ + L
Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VSKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHL 175
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ + I H++ LR HSR+P+V P+RI+ + ++ + +HANH E SE
Sbjct: 176 SWLANEITTIPHIKRLRIHSRLPVVLPERISHDFVEWFTALPLQKVLVLHANHANEMSET 235
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ + L G+ LL+QSVLLKG+ND + +++L T E + PYYLH D G SH
Sbjct: 236 LKSRLKTLRERGVTLLNQSVLLKGVNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASH 295
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
F ++ +EG++I+ +++ G P + ++ G GK ID H
Sbjct: 296 FYVSDDEGREIMEEAIKRLPGFLVPKLVREIGGQPGKTPIDLH 338
>gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium]
Length = 314
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 163/284 (57%), Gaps = 6/284 (2%)
Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
H+ I + ANLI+ +NP DP+ +Q I + E P+ D +++P++G++H+Y
Sbjct: 32 HFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGS-SEFFLSPLDDESNAPVEGLIHKY 90
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R+LL VC ++C++CFR+ ++ + + A YI+ +QI EVI +GGD
Sbjct: 91 PNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGGD 147
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL LS ++LQ +++ + I H++ LR HSR +V P RI +L Q L + V + +H+
Sbjct: 148 PLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLHS 207
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NH E S E + I +L+ I LL+QSVLLKG+ND + L++L + + PYYLH
Sbjct: 208 NHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLHL 265
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
D +G HF + + +++ LK+ +SG P + D G +
Sbjct: 266 LDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGEF 309
>gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
Length = 342
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR HSR+PIV P RI L + + V + H NH E +E AA++
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L ISG P ++ G K +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336
>gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
Length = 397
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 174/293 (59%), Gaps = 4/293 (1%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIVHRYPDRI 97
+TP IA L++ + PI Q++P++ E+++ P+E D + +++ P IVHRYP+R+
Sbjct: 80 ITPYIAQLMDKDDQACPIRIQYVPEQNEMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRV 139
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + ++C YCR C R+ MV S V+S + ++ Y++E ++ +V+ +GGDPL+L
Sbjct: 140 LFLVHNICGAYCRHCTRKRMV-SDPLNVISMERIRKSVEYLREHPEVQDVLLSGGDPLLL 198
Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ +L +VL +R + ++ILR SR+P P RI PEL Q L + + + NHP
Sbjct: 199 TDDKLDQVLSMIREARPDLKILRIGSRLPTQLPTRITPELCQILVK-NRVTLLNTQVNHP 257
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + + ++ L +GI+L +QSVL+KG+ND E++ +L+ V I+PYY++ D
Sbjct: 258 KEITPLFVKHMAMLRTSGIMLGNQSVLIKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDP 317
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
A G S F+++ + +I ++ +SG P +I+D GG GK+ + ++K
Sbjct: 318 APGNSKFQVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVRK 370
>gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342]
gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342]
gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
Length = 342
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR HSR+PIV P RI L + + V + H NH E +E AA++
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L ISG P ++ G K +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336
>gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 371
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 182/333 (54%), Gaps = 23/333 (6%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELN--------IL 70
+ +E+ D I+ + TP +L++ NP PI RQ IP K E +N +
Sbjct: 24 VTEEEADAIRNCETRW--GTTPYFVSLMDKENPECPIRRQVIPSKHENVNEFGIENYLVY 81
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
E R DN+ I +Y DRI + + + C +YCR CFR+E+V + ++ D
Sbjct: 82 KENR-----DNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKELVVDK--SMQLRFD 134
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L ++++ ++ EV+ TGGDP +L +++ +++ LR + H++++RF SR+PIV PQ
Sbjct: 135 VDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIEMIRFGSRLPIVLPQ 194
Query: 191 RINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
RI P L + L + K P+++ NH E +E AI L G+ + +Q+VL+KGIND
Sbjct: 195 RITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGVNVGNQAVLMKGIND 254
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPF 308
D L + + +RI+PYY+ + + A G HFR +E+G +++ +L+ SGL QP
Sbjct: 255 DEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIRDTLRGHTSGLAQPM 314
Query: 309 YILDLPGGYGKVKI-DTHNIKKVGNGSYCITDH 340
Y+ + GKV + + IK+ Y + +H
Sbjct: 315 YV--IATNIGKVPLMPDYYIKEKNEKEYILQNH 345
>gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 342
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+AG+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHAGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881]
gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881]
Length = 335
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+L+ NP+DP+ RQ + EE + DP+ + +H+ + G++H+Y R LL +
Sbjct: 59 DLMERGNPDDPLLRQVLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGA 118
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C V+CR+CFRR T LS K E AL ++ + I EVI +GGDPL L+++RL++
Sbjct: 119 CAVHCRYCFRRHF---PYQTHLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQ 175
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+L L I H++ LR HSR P+V P+R++ L L + +HANHP E S +
Sbjct: 176 LLDALAAIPHLRRLRIHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALV 235
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A +AG+ LL+QSVLL G+ND + LA+L + + PYYLH D G +HF
Sbjct: 236 ARCRDWRSAGMTLLNQSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFA 295
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ +++ A L+ ++ G P + PG K
Sbjct: 296 VPDVIARELHADLRARLPGFLVPRLTREEPGEPAKT 331
>gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
Length = 335
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 2/316 (0%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R T +L + + +I ++ + + + + +P+DP+ RQ +P
Sbjct: 18 RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E + DP+GD G++ +Y R LL + C ++CR+CFRR G
Sbjct: 78 TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPYQDLG 137
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
S E AL I + EV+ +GGDPL+L RL +++ L I H+Q LR HSR
Sbjct: 138 P--SQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+V P R+ L L + IHANHP E E +A+ AG+ LL+QSVL
Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND EILA L + PYYLH D AG++HF + E ++++ ++ ++ G
Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315
Query: 304 LCQPFYILDLPGGYGK 319
P + ++PG + K
Sbjct: 316 YLVPRLVREIPGDHSK 331
>gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
Length = 336
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 155/275 (56%), Gaps = 4/275 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I N NDP+ Q +PQ +EL + +DP+ + NH+P K +VH+Y R+L+ +C
Sbjct: 60 IEKGNLNDPLLLQVLPQHQELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICA 119
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR G + L+ + ++ + Y+ I EVI +GGDPL+L K L +
Sbjct: 120 VNCRYCFRRHFPYGDNQ---LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAER 176
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+++L I H++ LR H+R+P+V P RI+ ELI + ++ + + H NH E + +
Sbjct: 177 VRSLESIAHLKRLRIHTRLPVVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVES 236
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ RL G+ LL+Q VLLK +ND E +L ++ + PYY+ D AG +HF +
Sbjct: 237 AMLRLKQIGVTLLNQGVLLKNVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDI 296
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
IE+ Q+++ + +K+ G P ++PG K
Sbjct: 297 PIEDAQRLMGEVTKKLPGYLVPKLAKEIPGRASKT 331
>gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 342
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G++LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 342
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 155/274 (56%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ +Q + +EE P DP+ + N S + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLKQTLTAQEEFITAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL YI S++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHSELDEIIFSGGDPLMAKDYELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L+ L+++ V + H NH E + AA+ R
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVLLVNHINHANEIDDAFRAAMVR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ +LA+L + + PYYLH D G +HF +T EE
Sbjct: 243 LRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++IV L +SG P ++ G K +D
Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 342
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR HSR+PIV P RI L + + V + H NH E E AA++
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAM 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L ISG P ++ G K +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336
>gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
Length = 400
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 173/293 (59%), Gaps = 4/293 (1%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRI 97
+TP +A L++ ++PN PI Q++P+++E++I P E D + +++ P +VHRYP+R+
Sbjct: 85 ITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGTSLVHRYPNRV 144
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + ++C YCR C R+ MV S V+ ++ Y+++ ++ +V+ +GGDPL+L
Sbjct: 145 LFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDVLLSGGDPLLL 203
Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ +L ++L +R + ++ILR SR+ P R+ PEL+ L + + I NHP
Sbjct: 204 TDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVK-NRVTLINTQVNHP 262
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + I + L AG++L +QSV++KG+NDD E++ +L+ V I+PYY++ D
Sbjct: 263 REITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGIRPYYVYSMDP 322
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
A G S F ++ + +I ++ +SG P +I+D GG GK+ + +KK
Sbjct: 323 APGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVKK 375
>gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G++LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 337
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 62 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 120
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 121 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 178
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 179 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 238
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E
Sbjct: 239 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 298
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 299 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 331
>gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+P+V P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPVVIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ Q I EE NI+P DP+ D S + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLLQVITAPEEFNIVPGFSADPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + AL YIQ+ ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI L L ++ V + H NH E + ++
Sbjct: 183 EQISHIKRLRIHTRLPVVIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMML 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +AGI LL+QSVLL+G+N+ P+ILANL + I PYY+H D G +HF ++ EE
Sbjct: 243 LKHAGITLLNQSVLLRGVNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ I+ L K+SG P ++ G K +D
Sbjct: 303 ARGIIRELLTKVSGYLVPRLAREIGGESSKTPLD 336
>gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 342
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
Length = 351
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
N NDP+ RQ +P EE+ + DP+ + +H+P K +VH+Y RIL+ C + CR
Sbjct: 74 NLNDPLLRQILPIDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCR 133
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + L+ + ++ L+YIQ QI EVI +GGDPL++ K+L +++ L
Sbjct: 134 YCFRRHFPYANNH--LAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLE 191
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ LR H+R+PIV P RIN EL+ + V + +H NH E + I A S+L
Sbjct: 192 ALPQLKRLRIHTRLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKL 251
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A G+ LL+Q V+LK +ND E L + I PYY+ D G SHF +TI++
Sbjct: 252 AKIGVRLLNQGVILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQA 311
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
Q+++ + + G P ++PG K
Sbjct: 312 QQLMGQVAANLPGYLVPKLAKEIPGKTAKT 341
>gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334]
gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334]
Length = 342
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ
Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309
Query: 306 QPFYILDLPGGYGKVKI 322
P +I ++PG K +
Sbjct: 310 VPKFIREIPGALSKTPL 326
>gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 335
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y
Sbjct: 36 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + + AL YI++ S++ E+IF+GGD
Sbjct: 95 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHSELDEIIFSGGD 151
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H
Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + +++RL AG+ LL+QSVLL+G+ND+ E LA L + I PYYLH
Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + E + +V +L +K+SG P ++ G K +D
Sbjct: 272 LDKVQGAAHFLVDDNEARVLVKALLKKVSGYLVPRLAREIGGEASKTPLD 321
>gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 342
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 342
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523]
Length = 328
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++ + + + AN I N NDP+ +Q +P +E I DP+ + N++ + G+
Sbjct: 36 DVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVIDQAYSSDPLDEKNYNKVPGL 95
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI
Sbjct: 96 LHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRKDWLQAFEYIANDQSIEEVIL 153
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E +
Sbjct: 154 SGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLPERITTKLLRVLSEHRLDTIL 213
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PY
Sbjct: 214 VIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPY 273
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
Y+H D +GT H+ ++ + I+ L E SG P ++PG K + H
Sbjct: 274 YIHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFH 327
>gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
Length = 342
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ
Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309
Query: 306 QPFYILDLPGGYGKVKI 322
P ++ ++PG K +
Sbjct: 310 VPKFVREIPGALSKTPL 326
>gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 342
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E
Sbjct: 244 HHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 342
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 342
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 154/274 (56%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ +Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLKQTLTSQDEFVTAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L+ L ++ V + H NH E +E AA+ R
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVLLVNHINHANEIDDEFRAAMIR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ +LA+L + + PYYLH D G +HF +T EE
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++IV L +SG P ++ G K +D
Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
Length = 333
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 2/274 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDP+ +Q +P +E + DP+ + + +P+KGI+H+Y R+L+ + C V CR+C
Sbjct: 61 NDPLLKQVLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYC 120
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ + + D +A AYI + EVI +GGDPL LS++RL ++ TL +
Sbjct: 121 FRQHF--DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEAL 178
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
V +R H+RVP++ P+R++ L+ + + + IHANHP E +E + +
Sbjct: 179 PQVHTIRIHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKK 238
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG+ LL+Q+VLLK INDD LA+L + + PYYLH D AG SHF ++ E+
Sbjct: 239 AGVTLLNQTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVA 298
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ L K +G P + +LP K +D +N
Sbjct: 299 LYWELLAKCAGYLVPKLVRELPNKPFKTPVDLYN 332
>gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
Length = 342
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ
Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G
Sbjct: 250 NVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309
Query: 306 QPFYILDLPGGYGKVKI 322
P ++ ++PG K +
Sbjct: 310 VPKFVREIPGALSKTPL 326
>gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
Length = 342
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 5/306 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
++ + ++ +++ + A + P + NDP+ RQ + KEE P DP+ D
Sbjct: 40 ELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEEFINAPGFTTDPL-DEQR 98
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
S + G++H+Y +R LL + C + CR+CFRR +G + + AL YI++
Sbjct: 99 SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI PEL + L
Sbjct: 156 ELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPVVIPARITPELCRWLSA 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ V + H NH E E AA+++L AG+ LL+QSVL++ INDD + LA L
Sbjct: 216 SRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRRINDDADTLAALSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYY+H D G +HF ++ +E + I+ +L K+SG P ++ G K +
Sbjct: 276 DAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLVPRLTREVGGKPSKTPL 335
Query: 323 DTHNIK 328
D H I+
Sbjct: 336 DLHLIQ 341
>gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
Length = 342
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 3/306 (0%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
N+ E + +E +++ + + NPNDP+ +Q + K+E P DP
Sbjct: 34 NIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDEFVTAPGFSTDP 93
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ + N S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL Y
Sbjct: 94 LEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG--NKRNWQVALDY 150
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+
Sbjct: 151 IAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLV 210
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + H NH E E +A+ RL NAG+ LL+QSVLL+G+ND+ + LA+L
Sbjct: 211 SRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRGVNDNAQTLADL 270
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ + PYYLH D G +HF ++ EE ++IV L +SG P ++ G
Sbjct: 271 SNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMVPKLAREIGGEP 330
Query: 318 GKVKID 323
K +D
Sbjct: 331 SKTPLD 336
>gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
Length = 342
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 351
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y
Sbjct: 51 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFTATPGFTHDPL-DEQHSVVPGLLHKYH 109
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 166
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + A++RL AG+ LL+QSVLL+G+ND + LA L + I PYYLH
Sbjct: 227 NHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRGVNDSADTLAQLSNALFDAGILPYYLHV 286
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + E + +V +L +K+SG P ++ G K +D
Sbjct: 287 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 336
>gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632
gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
Length = 374
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 10/282 (3%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++ ++ +LIN NPNDPI R IP EEL + + D ++ + + G+
Sbjct: 27 KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEVWG--KLDASNESKYMKVHGL 84
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
H+YPD LL + VC +YCRFCFR+ + + V ++D L YI+ +I V+
Sbjct: 85 EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIRNHPEINNVLL 142
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK----EA 203
TGGDPLIL+ +L+K+LK L I HV+I+R S++ V+P R+ +P+L++ + E
Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGINDD E L L+
Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+ + PYY+ AG + IEE +V +++ ++SGL
Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLA 304
>gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 342
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
Length = 342
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 156/280 (55%), Gaps = 5/280 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P + NDP+ RQ + EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 63 MQPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+ L I+H++ LR H+R+P+V P RI PEL + L + V + H NH E E A
Sbjct: 179 IGELEAIEHLKRLRIHTRLPVVIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQA 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+GINDD + LA L + I PYY+H D G +HF +
Sbjct: 239 SMAQLRLAGVTLLNQSVLLRGINDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ +E + I+ +L KISG P ++ G K +D H
Sbjct: 299 SDDEARTIMQALLGKISGYMVPRLTREVGGKPSKTPLDLH 338
>gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 342
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336
>gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)]
Length = 337
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 149/263 (56%), Gaps = 2/263 (0%)
Query: 50 HNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
++P DP+ Q I E P+ +DPI + H L G++H+Y DR+LL + C ++C
Sbjct: 66 NDPQDPLLLQVIINNREFLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHC 125
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R+CFR+ + S + +L YIQ+ + EVIF+GGDPLI L ++ +L
Sbjct: 126 RYCFRKYFPYEKNQG--SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSL 183
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+PIV P RI L + ++ + I H NHP E ++ ++ +
Sbjct: 184 SKINHIKRLRIHTRLPIVIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLK 243
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +G+I+L+QSVLLK INDDP ILA L + I PYYLH D GT HF ++ ++
Sbjct: 244 LKESGVIMLNQSVLLKNINDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKK 303
Query: 290 GQKIVASLKEKISGLCQPFYILD 312
+ I+ SL + ISG P + D
Sbjct: 304 AKSIMKSLIKMISGYLIPRLVQD 326
>gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
Length = 342
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 162/298 (54%), Gaps = 5/298 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E +++ + A + P + NDP+ RQ + EE P DP+ D S + G
Sbjct: 45 REARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPG 103
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
++H+Y +R LL + C V CR+CFRR +G + + AL YI++ ++ E+
Sbjct: 104 LLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEI 160
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI PEL + L + V
Sbjct: 161 IFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPVVIPARITPELCRRLSASRLQV 220
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ H NH E E A++++L AG+ LL+QSVLL+GIND+ + LA L + I
Sbjct: 221 LMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRGINDNADTLAALSNALFDAGIL 280
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
PYY+H D G +HF ++ +E + I+ +L K+SG P ++ G K +D H
Sbjct: 281 PYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMVPRLTREVGGKPSKTPLDLH 338
>gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 340
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 156/276 (56%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ +P +E NI PE DP+ + ++ + G++H+Y +R+L+ + C + CR
Sbjct: 67 NPNDPLLRQVLPLIDEFNIHPEYSSDPLEEQSNE-IPGLLHKYHNRVLMIVKGGCAINCR 125
Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR S+ KGT + +L YI +I EVI +GGDPL+ L+ + +
Sbjct: 126 YCFRRHFPYSENKGT---KSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR HSR+P+V P RI ELI+ ++ + H NH E + E A+ +
Sbjct: 183 AKISHVKRLRIHSRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+Q V+LKG+ND+ + L +T + + PYY+H D G +HF ++ +
Sbjct: 243 LKAANVTLLNQGVMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQR 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 AREIMAELIERVSGYLVPKLTREVGGRKSKTPLDLH 338
>gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493]
gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331]
gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493]
gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331]
Length = 342
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ
Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q
Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIKHLPGYL 309
Query: 306 QPFYILDLPGGYGKVKI 322
P ++ ++PG K +
Sbjct: 310 VPKFVREIPGALSKTPL 326
>gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421]
gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421]
Length = 342
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 7/298 (2%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ RQ + E LP E DP+G++ + +VH+Y +R+L+ C YCR+CFRR
Sbjct: 46 LRRQVFAAETEKISLPYESADPLGESRYCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRR 105
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
++G + + E Y+++ I E++ +GGDP+ + +L+ +LK LR
Sbjct: 106 GFTARRQGWI-PDTEIEKITDYLKQNPDIKEILVSGGDPMSGTLGQLEALLKRLRQTSPE 164
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
++R +R PI P+ EL+Q LK KP++I H NHP E E AI NAG+
Sbjct: 165 LLIRLCTRAPIFAPELFTEELLQLLKSM-KPLWIIPHINHPAELGFEQKKAIDSCINAGL 223
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ SQSVLL+G+N+ E L L T V + +KP YL DLA GT+ FR+ + + I
Sbjct: 224 PMQSQSVLLRGVNNSVETLCALFHTLVCMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWR 283
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-----IKKVGNGSYCITDHHNIVHDYP 348
L++K+SGL P + +DLPGG GK + +KK S+ V+ YP
Sbjct: 284 ELRKKLSGLSLPQFAVDLPGGGGKFPLSILALYDTIVKKDDADSFSALGLDGKVYTYP 341
>gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris str. B100]
gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris]
Length = 342
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
++ + +++ + + P + DP+ RQ +P E+ ++P D +GD G
Sbjct: 51 EDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVLPLDAEMRVVPGFALDAVGDGAARTTTG 110
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++ +Y R LL C V+CR+CFRR +++ + A+A I I EV+
Sbjct: 111 VIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETA--ARDGWREAVAAIAADPDIDEVL 168
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL L+ +L ++ L I H++ LR HSR+P+V P+R++ L+ L+ PV
Sbjct: 169 LSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVA 228
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
IHANH EF E AA+ L AG LL+Q+VLL+G+ND + LA L + P
Sbjct: 229 FVIHANHANEFDAEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLP 288
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
YYLH D AG +HF + + + A L ++SG P + ++PG GK
Sbjct: 289 YYLHQLDRVAGVAHFEVDDARARALHAELATRLSGYLVPRLVREIPGDTGK 339
>gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
Length = 339
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 150/269 (55%), Gaps = 2/269 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
N DP+ RQ +P EL+ P DP+GD S G++H+Y R+LL C + CR
Sbjct: 68 NLEDPLLRQVLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCR 127
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR +Q ++ +AL YI +++++ EVI +GGDPL L+ +RL +++ L
Sbjct: 128 YCFRRHFPYAQANA--AAGQWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLV 185
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR H+R+P+V P R+ EL++ + + +H NH E +A+ RL
Sbjct: 186 DIPHIRRLRIHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRL 245
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ +L+Q+VLL+G+ND+ L L + + I PYYLH D AG HF +T +
Sbjct: 246 REAGVTMLNQTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRA 305
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
+++ + ++ G P + ++ G GK
Sbjct: 306 RELHRQMARRLPGYLVPRLVQEIEGAPGK 334
>gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380]
gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 376
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 169/306 (55%), Gaps = 9/306 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K +T+ + N +++ ++K + Y+ +LI+ ++P DPI R IP +
Sbjct: 5 KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P D G++ +S G+ H+YPD +L + VC CRFCFR+ + V
Sbjct: 65 ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++D A LAYI++ ++I V+ TGGDPL+LS ++L ++++ LR I+HV+I+R S++P
Sbjct: 123 --ARDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180
Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+P RI +PEL++ K +P +Y+ NHP E + EA A+ + +G+ ++ Q
Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ +++G+ND E+L L + + PYY+ G + + + IEEG I A +
Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300
Query: 301 ISGLCQ 306
SGL +
Sbjct: 301 CSGLAR 306
>gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 174/301 (57%), Gaps = 11/301 (3%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E +++EI + + +T +LI+ ++PNDPI R +P +EELN+L D G+
Sbjct: 26 EMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEELNLLGSY--DTSGERE 83
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
++ + G+ H+Y L+ + C YCR+CFR+ +VG +L + A+ YI+
Sbjct: 84 NTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEILQRFND--AVKYIENHE 141
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
+I V+ +GGDP +LS +++ L+ L I H+ +RF +RVP+ P RI + EL+ L
Sbjct: 142 EINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPVTFPDRIIEDDELLTLL 201
Query: 201 K---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + +Y+ NHP E +++A A+SRL +G+IL +Q+VLLKG+NDDPE LA L
Sbjct: 202 EKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQTVLLKGVNDDPETLAEL 261
Query: 258 MRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPG 315
V + + PYY+ + ++F++ + +G +IV K+K++G + F YI+
Sbjct: 262 QNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKKLNGHSKRFKYIMSHQT 321
Query: 316 G 316
G
Sbjct: 322 G 322
>gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
Length = 338
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 148/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N NP DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + + D YI+ I EVI +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPDINEVILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 237 LMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLM 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei
VT8]
gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 355
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 4/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP+DP+ RQ +P +E I P+ DP+ + + G++ +Y R LL + C
Sbjct: 78 IEQGNPDDPLLRQVLPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCA 137
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ CR+CFRR G + L +D + + +I EVIF+GGDPL ++ + L +
Sbjct: 138 INCRYCFRRHFPYGDHR---LGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQW 194
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+ L I H++ LR HSR+P+V PQR+ LI L + +H NHP E +
Sbjct: 195 AELLGDIPHLRRLRIHSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQ 254
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A RL+ AG+ LL+QSV+LKG+ND L+ L T E + PYYLH D +G HF +
Sbjct: 255 AFRRLSEAGVTLLNQSVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSV 314
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ + +IV + E + G P + +LPG K +D
Sbjct: 315 SDTDAIRIVNEMLENLPGFLVPKLVRELPGRASKTPLD 352
>gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
Length = 346
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR
Sbjct: 77 DPADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L
Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
R I H++ LR H+R+PIV P+R++ EL+ L P+ I +HANH EF AA++R
Sbjct: 194 RAIPHIRRLRIHTRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMAR 253
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q+VLL+G+ND + L +L + PYYLH D G +HF +
Sbjct: 254 LRGIGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTR 313
Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
+ ++A L ++SG P + +LPG
Sbjct: 314 AKALIAGLTARLSGYLVPKLVRELPG 339
>gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
Length = 336
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 146/273 (53%), Gaps = 2/273 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR
Sbjct: 65 DPNDPLFRQVFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCR 124
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + S + AL YI + EVI +GGDPL L+ RL ++++ L
Sbjct: 125 YCFRRHFPYADHNPAPSQ--WQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALA 182
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I HV+ LR H+R+P+V P+R++ L+Q L+ + IHANH E + A+ L
Sbjct: 183 AISHVKRLRIHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGL 242
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ AG L +Q+VLL+GIND L +L + + + PYYLH D G +HF +
Sbjct: 243 SRAGCRLFNQTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTA 302
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
Q + +L+ ++ G P + +L G K+ ++
Sbjct: 303 QCLHRTLRARLPGYLVPLLVQELAGAPSKLPLE 335
>gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVLTSQDEFVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L + + + H NH E + A++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTT 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L NAG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRNAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L ++SG P ++ G K +D
Sbjct: 303 ARRIMRELLTRVSGYMVPRLAREIGGEPSKTPLD 336
>gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 342
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ +Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR
Sbjct: 67 NPGDPLLKQTLTSQDEFITAPGYSTDPLEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L+ L+++ V + H NH E + AA++R
Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITDALVTRLEQSRLQVLLVNHINHANEIDADFRAAMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
+ AG+ LL+QSVLL+G+ND +LA+L + + PYYLH D G +HF +T EE
Sbjct: 243 MRKAGVTLLNQSVLLRGVNDSARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+KI+ L +SG P ++ G K +D
Sbjct: 303 ARKIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
Length = 365
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 163/289 (56%), Gaps = 9/289 (3%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E+ +++K + + LIN +P+DPI + IP+++EL D + +
Sbjct: 18 EEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIPEEDELEEWGSL--DASSERS 75
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+
Sbjct: 76 YTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRSHK 133
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
+I V+ TGGDPL+LS ++L+K++ +LR I HV I+R S++P +P RI +PEL++ +
Sbjct: 134 EITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGSKIPAFNPYRIIDDPELLRMI 193
Query: 201 KEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
++ K +Y+ NH E +EEAI A++ L +AG +L +Q+ LL+GIND PE L L
Sbjct: 194 RKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLGEL 253
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ + + PYY+ +G F + IE+G +I +SG+ +
Sbjct: 254 LDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKAISNLSGVAK 302
>gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185]
gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185]
Length = 342
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ I ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVITSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 335
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y
Sbjct: 36 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD
Sbjct: 95 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 151
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H
Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + +++RL AG+ LL+QSVLL+G+ND+ E LA L + I PYYLH
Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + E + +V +L +K+SG P ++ G K +D
Sbjct: 272 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 321
>gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032]
gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis
z3032]
Length = 342
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 5/307 (1%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
N+ E++ ++ +++ + A + NP DP+ RQ + +EE P DP
Sbjct: 34 NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREEFVAAPGFTTDP 93
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136
+ + N S + G++H+Y +R LL + C V CR+CFRR +G + ++ +AAL
Sbjct: 94 LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
YI +++ E+IF+GGDPL+ L+ ++ + I H++ LR HSR+PIV P RI L
Sbjct: 150 YIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPIVIPARITDAL 209
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
++ L E V + H NH E + A +++L AG+ LL+QSVLLKG+ND+ L
Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKGVNDNAATLTA 269
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L + + PYYLH D G +HF ++ +E + I+ L ++SG P ++ G
Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLVPKLAREIGGE 329
Query: 317 YGKVKID 323
K +D
Sbjct: 330 PSKTPLD 336
>gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 353
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 20/283 (7%)
Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEELN---------ILPEEREDPIGDNNHSPLKG 88
TP +A+L++ +PN PI Q IP +E + E R D
Sbjct: 40 GTTPHMASLMDKDDPNCPIRMQAIPSLKETKNEFGLDNYLVWKENR-----DTEEKRPDC 94
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
I +Y DRI + +C YCR CFR+E+V + + D E + +I+E +I +V+
Sbjct: 95 IARQYVDRIAFTVTDICANYCRHCFRKELVVDKNLEL--RFDLEEGIDWIREHEEIRDVL 152
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPV 207
TGGDPL+LS R+ +LK+LR I HV+++RF SRVPI PQRI PEL++ L + PV
Sbjct: 153 VTGGDPLLLSDDRIDHLLKSLRSIDHVEMIRFGSRVPIAMPQRITPELLEVLGGDHEVPV 212
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
++ NHP E + A+ L AG+ + +Q VLLKGINDD E +L + ++ RI+
Sbjct: 213 WLNTQCNHPKELTPRTRKAVYDLLTAGVNVGNQMVLLKGINDDVETFRHLHQKLLQYRIR 272
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
PYY+ + + A G HFR E I L+ +GL QP Y+
Sbjct: 273 PYYVFYCEPAPGIDHFRTRAE---LIRDGLRGHTTGLAQPMYV 312
>gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
Length = 343
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 169/313 (53%), Gaps = 2/313 (0%)
Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
++L+N + K ++ + + + + + + + + +DP+ +Q +P +EL++ P
Sbjct: 33 EELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQELDLHP 92
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
DP+ + + +P+ G++H+Y R+LL + C + CR+CFRR + S ++
Sbjct: 93 GFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQENNP--SQREW 150
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ AL YI++ + I EVI +GGDPL + L+ + + I HV+ILR HSR+P+V PQR
Sbjct: 151 QQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVVIPQR 210
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
I + L + IH+NHP E I A+ L G+ LL+Q+VLL GIND+P
Sbjct: 211 ITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGINDNP 270
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
E L L + + PYYLH D +G +HF +T ++++ L+ ++ G P +
Sbjct: 271 EALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIPKLVR 330
Query: 312 DLPGGYGKVKIDT 324
+ G K+ I+
Sbjct: 331 EQSGELSKMPINN 343
>gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297]
gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297]
Length = 346
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 2/288 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +T +A+L+ NP DP+ Q IP+ +E P + DP+ + ++ + G++H+Y
Sbjct: 59 FRMRITRHLASLMEKGNPFDPLLLQLIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQ 118
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R+L+ C ++CR+CFRR S+ LS +A YIQ S I EVIF+GGDP
Sbjct: 119 NRVLIIAHQACAIHCRYCFRRHFPYSEAR--LSESSLDAIEQYIQSHSDIDEVIFSGGDP 176
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L+ + L +++ + +Q +R H+R P+ P+RI L+ L V + +H N
Sbjct: 177 LSLADEALSNLIQRFDRLPQIQTVRLHTRTPVAAPERITETLLNTLNNLSCQVVMVVHIN 236
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + +A RL + + LL+QSVLL+GIND + L + + PYYLH
Sbjct: 237 HPNELHPDLLAKFLRLRDINVTLLNQSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSL 296
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
D GTSHF + + +I ++ +SG P + ++P + K I
Sbjct: 297 DPVQGTSHFDVNQQTAGQIWLEMQAGLSGYLLPRLVREIPQRHSKTWI 344
>gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
Length = 342
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ +Q I ++E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQHSVVPGLLHKYLNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + ALAYI ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALAYIAAHPELDEIIFSGGDPLMAKDHELDWLISELE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI L + + + + H NH E ++ AA+ L
Sbjct: 184 AIPHIKRLRIHSRLPVVIPARITGALAERFARSSLQILLVNHINHAQEIDDDFRAAMKTL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RQAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ IV L ISG P ++ G K +D
Sbjct: 304 RTIVRELLTLISGYMVPKLAREIGGEPSKTPLD 336
>gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF]
gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 338
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E RI PYYLH D G HF L
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYYLHVLDKVKGAQHFDLI 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1]
gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1]
Length = 342
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
Length = 338
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR
Sbjct: 63 DPFDPLLLQVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + D YI++ QI EVI +GGDPL LS+++L L+ L
Sbjct: 123 YCFRRHF--PYQENLPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLA 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ILR HSRVP+V P RI+ ELI LK + + + IH+NH E + + + +L
Sbjct: 181 SLPQIKILRIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ I +L+Q+VLLKG+ND EIL NL + R+ PYYLH D G HF L E
Sbjct: 241 SEHHITVLNQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
I + + G P + ++ G K
Sbjct: 301 DHIYTDVLASLPGYLVPKLVREIAGEKNKT 330
>gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
Length = 341
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 163/317 (51%), Gaps = 2/317 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS L + + EQ+ ++ + +++ + + P NP DP+ Q +P
Sbjct: 26 QAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQVLPVAA 85
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ P+ +DP+ ++ H+P+ GIVH+Y +R+LL + C + CR+CFRR +
Sbjct: 86 EMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPYDENRQ- 144
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
S + + AL YI+ I EVI++GGDPL + L + + I H++ LR H+R+P
Sbjct: 145 -SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLRIHTRLP 203
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI+ + + +H NH E ++ AI +L AG+ +L+QSVLL+
Sbjct: 204 VVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLNQSVLLR 263
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND LA+L + + PYYLH D AG HF L +++ L+ + G
Sbjct: 264 GINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQTLLPGFL 323
Query: 306 QPFYILDLPGGYGKVKI 322
P + ++P K I
Sbjct: 324 VPKLVREIPDRESKTLI 340
>gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012]
gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012]
gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905]
gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82]
Length = 342
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900]
Length = 338
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 237 LLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197]
gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 342
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74]
Length = 301
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 26 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 84
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 85 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 142
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 143 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 202
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 203 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 262
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 263 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 295
>gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE]
gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056]
gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058]
gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059]
gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978]
gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2]
gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715]
gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
Length = 338
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617]
gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617]
Length = 320
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 45 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 104 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 161
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 162 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 221
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 222 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 281
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 282 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314
>gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978]
Length = 280
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 1 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 61 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274
>gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp.
holarctica LVS]
gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp.
holarctica FSC200]
gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp.
holarctica URFT1]
gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp.
holarctica URFT1]
gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 328
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL +C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1]
gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1]
Length = 342
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
Length = 340
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR
Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + LL+Q VLLKG+ND + L+ L + I PYYLH D G +HF + E
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++A L E +SG P ++ G K +D H
Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338
>gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1]
gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101]
gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280]
gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15]
gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1]
gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101]
gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86]
gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280]
Length = 342
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
Length = 313
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR
Sbjct: 44 DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCR 103
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L
Sbjct: 104 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDAL 160
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
R I H++ LR HSR+PIV P+R++ EL+ L P+ I +HANH EF AA++R
Sbjct: 161 RAIPHIRRLRIHSRLPIVLPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMAR 220
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q+VLL+G+ND + L +L + + PYYLH D G +HF +
Sbjct: 221 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDAR 280
Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
+ ++A L ++SG P + +LPG
Sbjct: 281 AKALIAGLTARLSGYLIPKLVRELPG 306
>gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta
thermophila PT]
gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT]
Length = 392
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 172/300 (57%), Gaps = 11/300 (3%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + +K+++ ++ ++ +++ + +LI+ ++P DP+ + IP E+
Sbjct: 6 DIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEMYNWGT 65
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDT 131
+ DP + +++ L G+ H+Y L+ + + C CRFCFR+ + + S T + D
Sbjct: 66 K--DPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETAI---DL 120
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
AL YI+E +I V+ +GGDPL+LS +RL+++++ LR I HVQI+R +++P+ +P R
Sbjct: 121 PRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVYNPFR 180
Query: 192 I--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
I +P L++ +K + +Y I NHP E S E + A+S+L AG I +SQ+ LL+G
Sbjct: 181 ITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTPLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+PE LA L + + + PYY+ + G HF++ +E IV K SGL +
Sbjct: 241 VNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCSGLAK 300
>gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354]
gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1]
gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143]
gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042]
gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354]
gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1]
gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143]
Length = 342
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
Length = 338
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++H
Sbjct: 44 SEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y R LL L C V+CR+CFRR + + + D YI+ I E+I +G
Sbjct: 104 KYKSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPHINEIILSG 161
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + +
Sbjct: 162 GDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLVV 221
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYL
Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G HF L E I + + G P + ++ G K +
Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
Length = 348
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + +P+DP+ Q + +EE P DP+ D HS + G++H+Y
Sbjct: 51 FALRVPRAFAARMQKGDPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 109
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELNEIIFSGGD 166
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + +++RL AG+ LL+QSVLL+G+ND E LA L + I PYYLH
Sbjct: 227 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDSAETLAQLSNALFDAGILPYYLHV 286
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + E + +V +L +K+SG P ++ G K +D
Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336
>gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 281
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 59
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L +
Sbjct: 60 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 116
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E
Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 176
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF +
Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 236
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 274
>gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
Length = 310
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 7/276 (2%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
N+ + +PNDPI Q IP+ EEL+ + DP+ D+ H + G++H+Y DR+LL
Sbjct: 32 NIADFDDPNDPILLQIIPKLEELDTVKGFNLDPVNDSQHEKITGLIHKYHDRVLLLFSKH 91
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
CP++CR+CFR+ S + + EA L+YI+ I EVI +GGDPL ++ L
Sbjct: 92 CPIHCRYCFRKGYNYSDN----NKQQIEAWLSYIESNHDIEEVILSGGDPLFVNSATLLD 147
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIHANHPYEFSE 221
+ + IKH+ R HSR+P+V P ++ L ++ A K + + IH+NH E ++
Sbjct: 148 FVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLANRIRRAAKKDIDMILVIHSNHEKELTD 207
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
E + ++S G I+L+ SVLLKGIND+ L +L R + + + PYYL+ D G++
Sbjct: 208 EVVKSVSSFQAEGFIILNHSVLLKGINDNALTLKSLSRKLIRMGVIPYYLNLLDKIEGSA 267
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
HF + I L++ SG P + D Y
Sbjct: 268 HFFVEKNISLSIYQELQKISSGYLVPKLVQDNGKDY 303
>gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr.
W3110]
gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952]
gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B]
gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1]
gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK
gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655]
gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr.
W3110]
gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952]
gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1]
gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1]
gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1]
gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11]
gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482]
Length = 342
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++C + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a]
gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a]
Length = 342
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
Length = 335
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 154/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNPSDPLLLQVLTAREEFITAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L I H++ LR H+R+P+V P RI L Q L E+ V + H NH E ++
Sbjct: 171 LDELESIPHIKRLRIHTRLPVVIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD E+LA L + I PYY+H D G +HF +
Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328
>gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
Length = 393
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 177/312 (56%), Gaps = 17/312 (5%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+ I Y +++ +LIN + D I + IP E++I D G+++++ L+G
Sbjct: 61 RNILEKYPMSVPRYYLSLINTDDEGDCIRKMSIPSFSEMDITGTF--DTSGESSNTKLRG 118
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ H+YP +LL + C +YCR+CFR+ MVGS ++ +D + A++YI E ++I V+
Sbjct: 119 LQHKYPQTVLLLSTNRCAMYCRYCFRKRMVGSHTEEIV--EDIDKAVSYIAEHTEISNVL 176
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKE--AG 204
+GGD +L + ++ L L I H+ +RF ++VP+V PQRI + EL LK+
Sbjct: 177 ISGGDSFLLDNAAIEHYLSALCSIGHIDYIRFGTKVPVVFPQRITDDRELQDILKKYCTK 236
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
K +Y+ NHP E +E A+ A++ L + G+I+ +Q+VLLKGINDDP +LA LM+ F ++
Sbjct: 237 KQLYVMTQFNHPSELTEHAVNAVNCLKSLGLIVKNQTVLLKGINDDPAVLAGLMKQFTKI 296
Query: 265 RIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGGYGKVKI 322
I PYY+ G + F++ + G IV K +G + F Y L P GKV+I
Sbjct: 297 GILPYYVFQCRPVTGVKNQFQVPLRTGYDIVEQAKRLQNGNGKCFRYALSNPD--GKVEI 354
Query: 323 -----DTHNIKK 329
D+H I K
Sbjct: 355 IGKMDDSHMIFK 366
>gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp.
tularensis FSC198]
gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis WY96-3418]
gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis NE061598]
Length = 328
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
Length = 338
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct]
Length = 363
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 63 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 122
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 123 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 180
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E +
Sbjct: 181 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 240
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 241 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 300
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 301 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 354
>gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329]
Length = 340
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR
Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + LL+Q VLLKG+ND + L L + I PYYLH D G +HF + E
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++A L E +SG P ++ G K +D H
Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338
>gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 340
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E + + + A + P + DP+ RQ +P +E + DPIG+ + P+ G+
Sbjct: 46 EARRLFPMLVPKAFAAAMRPGDAQDPLLRQVLPVGDEFLVADGFGPDPIGEQD-GPMPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y R+LL L C V CR+CFRR + + + + A YI ++I E++
Sbjct: 105 LHKYQSRVLLMLRTGCAVNCRYCFRRHFPYADHK--VGAAELAQAHEYIASDTRINELLL 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L +++ + H++ LR H+R+P+V P RI +L+ L +A V +
Sbjct: 163 SGGDPLMARDDHLAELVARFSDLPHLKRLRIHTRLPVVLPSRITDQLVSLLADAPWRVVM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H NHP E E +A ++RL AG+ LL+Q+VLLKG+ND + L L + + PY
Sbjct: 223 VLHINHPNELQPELVAGLARLKAAGVTLLNQAVLLKGVNDHADTLVALAEGLFDAGVLPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D AG +HF + + + ++A +++ G P + ++ G K ID
Sbjct: 283 YLHLLDRVAGAAHFEVDEDRARALMAEQLQRLPGFLVPRLVREIAGEASKTPID 336
>gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 347
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 5/301 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
Q+ ++ + + + A + P + DP+ Q + ++E + P DP+ D H
Sbjct: 40 QLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIVTPGFSHDPL-DEQH 98
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
S + G++H+Y +R LL + C V CR+CFRR +G + + AL YI+++
Sbjct: 99 SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL Q L +
Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPVVIPARITAELCQRLAQ 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ V + H NH E E +++RL AG+ LL+QSVLL+G+ND+ + LA L
Sbjct: 216 SSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRGVNDNADTLAALSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYYLH D G +HF + +E + ++ L ++SG P ++ G K +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLVPSLTREIGGEASKTLL 335
Query: 323 D 323
D
Sbjct: 336 D 336
>gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
Length = 342
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQQEFIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ +AAL YI ++ E+IF+GGDPL+ L+ +L L
Sbjct: 126 YCFRRHFPYTENQG--NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I HV+ LR HSR+P+V P RI EL + + + H NH E + A+++L
Sbjct: 184 DIGHVKRLRIHSRLPVVIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ LA+L + + PYYLH D G +HF +T +E
Sbjct: 244 RAAGVTLLNQSVLLRGVNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L ISG P ++ G K ID
Sbjct: 304 RQIMRELLTLISGYMVPKLAREIGGEPSKTPID 336
>gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
Length = 342
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 5/307 (1%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
N+ E++ ++ +++ + A + NP DP+ RQ + +EE P DP
Sbjct: 34 NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREEFVAAPGFTTDP 93
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136
+ + N S + G++H+Y +R LL + C V CR+CFRR +G + ++ +AAL
Sbjct: 94 LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
YI ++ E+IF+GGDPL+ L+ ++ L I H++ LR HSR+PIV P RI L
Sbjct: 150 YIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPIVIPARITDAL 209
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
++ L E V + H NH E + +++L AG+ LL+QSVLLKG+ND+ LA
Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKGVNDNAATLAA 269
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L + + PYYLH D G +HF ++ +E + I+ L ++SG P ++ G
Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLVPKLAREIGGE 329
Query: 317 YGKVKID 323
K +D
Sbjct: 330 PSKTPLD 336
>gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73]
gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans]
Length = 315
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ RQ +P EL+ +P D +GD G++H+Y R LL C V+CR
Sbjct: 44 DPHDPLLRQVLPLDAELHRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCR 103
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR +++ + A+A I I EVI +GGDPL L+ +L ++ + L
Sbjct: 104 YCFRRHFPYAEESA--ARDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALT 161
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ LR HSR+P+V P+RI+ L+ L+ P+ + IHANH EF AA++RL
Sbjct: 162 ALPQIKRLRLHSRLPVVLPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARL 221
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+AG LL+Q+VLL+G+ND E LA L + PYYLH D G +HF +
Sbjct: 222 RDAGAQLLNQAVLLRGVNDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATA 281
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +L ++SG P + ++PG K
Sbjct: 282 LDLHRALASRLSGYLVPKLVREIPGDSSK 310
>gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
Length = 335
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 155/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P +DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+ L I H++ LR HSR+P+V P RI P L Q L ++ V + H NH E
Sbjct: 171 VGELESITHIKRLRIHSRLPVVIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 NDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328
>gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718]
gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718]
Length = 342
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022
gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 340
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 158/289 (54%), Gaps = 2/289 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+S+ + + + ++P DP+ Q +P +EL +DP+ + + + G++ +Y
Sbjct: 50 FSLRVPKTFVSRMKKNDPFDPLLLQILPHTKELKNNHNFVQDPLEETKNVIIPGLIRKYN 109
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+RILL L C + CR+CFRR SQ + ++ A+ YI+ ++ + EVI +GGDP
Sbjct: 110 NRILLLLKTNCAINCRYCFRRYFPYSQHPG--NKENLNLAIQYIKNQTDLNEVILSGGDP 167
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ +Q ++ TL I H++ LR H+R+PIV P RI L + L + I H N
Sbjct: 168 LMAKDHEIQWIVNTLSNIYHIKRLRIHTRLPIVIPSRITNNLCKILSTTRLKILIVTHIN 227
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E + E I++L GI LL+QSVLL+GIND+ +IL+ L ++ I PYYLH
Sbjct: 228 HAQEINHELQYNINKLHKLGITLLNQSVLLRGINDNAKILSQLSNKLFDINILPYYLHIL 287
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D T+HF ++ ++ IV L ISG P + + PG K+ I+
Sbjct: 288 DKVKSTTHFYVSEKQASIIVVELLSMISGFLVPKLVCEHPGKNSKIYIN 336
>gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica
W22703]
Length = 328
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 48 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 106
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L +
Sbjct: 107 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 163
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E
Sbjct: 164 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 223
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF +
Sbjct: 224 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 283
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 284 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 321
>gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai]
gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli
O157:H7 str. EC4024]
gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966]
gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli]
gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212]
gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101]
gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89]
gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687]
gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA
5905]
gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61]
gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125]
gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044]
Length = 342
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 342
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + +EE P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTAQEEFVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + A+ YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+S L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RAAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RRIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89]
gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536]
gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11]
gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88]
gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1]
gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206]
gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89]
gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia
coli 536]
gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11]
gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88]
gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82]
gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034]
gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1]
gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146]
gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C]
gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3]
gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3]
gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252]
gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263]
gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1]
gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206]
Length = 342
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 343
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 63 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+ CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L +
Sbjct: 122 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E
Sbjct: 179 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF +
Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336
>gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
Length = 340
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 154/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE ++ DP+ + +++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPFDPLLRQVLPLSEEFDVKQGYSNDPLLEQDNA-IPGLLHKYRNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L Y+Q++ +I EVI +GGDPL+ L+ +++ +
Sbjct: 126 YCFRRHFPYQENKG---SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
IKH++ +R HSR+P+V P RI EL++ V + H NH E + E A +R
Sbjct: 183 ADIKHIKRIRIHSRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AGI LL+Q V+LKG+ND E L + I PYY+H D G +HF ++ E
Sbjct: 243 LKLAGITLLNQGVMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 AKRIMAGLLERVSGYLVPTLTREIGGRSSKTPLDLH 338
>gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12]
gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 357
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C
Sbjct: 90 HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR I
Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSI 207
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L
Sbjct: 208 AHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 267
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + +
Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 327
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P ++ ++PG K
Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354
>gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
Length = 346
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 152/273 (55%), Gaps = 4/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ Q +P EL+ DP+GD+ G++ +Y R LL C V+CR
Sbjct: 76 DPHDPLLVQVLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCR 135
Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR ++ V + D AALA I EV+ +GGDPL L+ L ++ + L
Sbjct: 136 YCFRRHFPYAEVPSGVAAWSDAIAALA---ADPSIQEVLLSGGDPLTLADATLAQLAQQL 192
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ +R H+R+PI+ PQRIN +L+ L + IHANHP E +AAI R
Sbjct: 193 AAIPHLRRIRVHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDR 252
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+++L+Q+VLL G+NDD ++LA L ++ R+ PYYLH D G +HF + E
Sbjct: 253 LNQAGVMVLNQAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRER 312
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G ++ L+ ++ G P Y+ ++ G K I
Sbjct: 313 GVDLIRQLRARLPGYAVPRYVEEIAGQPNKTII 345
>gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
Length = 346
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 4/266 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR
Sbjct: 77 DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L
Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
R I H++ LR H+R+PIV P+R++ EL+ L P+ I +HANH EF AA++R
Sbjct: 194 RQIPHIRRLRIHTRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMAR 253
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q+VLL+G+ND + L +L + PYYLH D G +HF + +
Sbjct: 254 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQ 313
Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
+ ++A L ++SG P + +LPG
Sbjct: 314 AKALIAGLTARLSGYLIPKLVRELPG 339
>gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
Length = 328
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 338
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N NP DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 59 MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS+++L L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLALWL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K ++ILR HSRVPIV P RI+ +LI LK + + + +H+NH E + +
Sbjct: 177 ERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTCSK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 237 LLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFDLE 296
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ I + + G P + ++ G K
Sbjct: 297 SSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 330
>gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75]
gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75]
Length = 342
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
Length = 328
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL
Sbjct: 49 FADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQ 108
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + IH NHP E +
Sbjct: 167 EFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDN 226
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ + GII L+QS LLK INDD +L L + ++ PYY+H D +GT H
Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327]
Length = 342
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
Length = 338
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++H
Sbjct: 44 SEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y R LL L C V+CR+CFRR + + + D YI+ I E+I +G
Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWPNIKNYIEANPHINEIILSG 161
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL LS++++ L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + +
Sbjct: 162 GDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVV 221
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYL
Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G HF L E I + + G P + ++ G K +
Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043]
gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 347
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + NP+DP+ Q + + E + P DP+ D HS + G++H+Y
Sbjct: 51 FALRVPRAFAARMQKGNPDDPLLLQVLTARAEFIVTPGFTHDPL-DEQHSVVPGLLHKYH 109
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGD 166
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + +++RL +G+ LL+QSVLL+G+ND E LA L + I PYYLH
Sbjct: 227 NHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRGVNDSAETLARLSNALFDAGILPYYLHV 286
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF + E + +V +L +K+SG P ++ G K +D
Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336
>gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
Length = 340
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR
Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + LL+Q VLLKG+ND + L+ L + I PYYLH D G +HF + E
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++ L E +SG P ++ G K +D H
Sbjct: 304 RQLMVGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338
>gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
Length = 340
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL Q L++ V + H NH E + E + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q VLLKG+ND E +L + I PYYLH D G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ L ++SG P ++ G K +D +
Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338
>gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685]
gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685]
Length = 342
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 5/280 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +P DP+ RQ + E P DP+ + HS + G++H+Y +R LL + C
Sbjct: 63 MRPGDPQDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +GT + + AL Y++E ++ E+IF+GGDPL+ L +
Sbjct: 122 VNCRYCFRRHFPYQENQGT---RANWQRALEYLREHPELDEIIFSGGDPLMAKDHELDWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + H++ LR HSR+P+V P R+ L Q + E+ + + H NH E E A
Sbjct: 179 FSQLESLPHLKRLRIHSRLPVVIPARVTETLCQRMAESRLQMLLVTHINHANEIDEALSA 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ RL AG+ LL+QSVLL+G+ND+ + LA L + I PYYLH D G +HF +
Sbjct: 239 AMQRLKQAGVTLLNQSVLLRGVNDNADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+E + ++ L ++SG P ++ G K ++D H
Sbjct: 299 PDDEARVLMHGLLARVSGYLVPRLTREIGGEPSKTQLDLH 338
>gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 328
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 VHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
Length = 356
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 2/268 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +PNDP+ RQ + E +P EDP+ + + +P GIVH+Y R+LL C
Sbjct: 76 MRPGDPNDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACA 135
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR L + A+ Y+ + ++ EVI +GGDPLIL L +++
Sbjct: 136 VHCRYCFRRHF--PYADNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLI 193
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L + H+ LR HSR+P+V P R+ L + L + + +H NHP E
Sbjct: 194 DRLESLGHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTER 253
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ R A + LL+QSVLL G+NDDP +L L E + PYYLH D AG HF +
Sbjct: 254 LQRWRPASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVA 313
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLP 314
E+ I + K+ G P +LP
Sbjct: 314 DEQALAIYRQMAAKLPGYLLPKLARELP 341
>gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
Length = 328
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 145/279 (51%), Gaps = 3/279 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + EL I DP+ + + +PLKG++H+Y R+LL L
Sbjct: 49 FAQRMQKGNPQDPLLLQVLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLT 108
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CRFCFRR + AYI + S I EVI +GGDPL+ S
Sbjct: 109 GVCAVNCRFCFRRHFPYQDNNP--GRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVF 166
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
++L+ L I HV +RFH+R+PIV P+RI+ L+ L I +H NHP E +++
Sbjct: 167 SELLQQLEQIPHVHTVRFHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDD 226
Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
+ A+ L AG LL+Q+VLL GIND+ ILA L + + PYYLH D G +
Sbjct: 227 EVRHALRALRQAGCHLLNQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAA 286
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
HF L + Q I L++ + G P + PG K
Sbjct: 287 HFDLPLATVQTIYQQLQQLVPGYLLPRLACEEPGKLSKT 325
>gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020
gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 337
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 151/271 (55%), Gaps = 4/271 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A+ + ++P DP+ Q I + +E + EDP+ + L G++H+Y DR+L L
Sbjct: 59 FASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILK 118
Query: 103 HVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + CR+CFR+ KG + K+ L YI + ++ EVI +GGDPL+
Sbjct: 119 TNCAINCRYCFRKHFPYEKNKG---NKKNWIQILHYISQNIELNEVILSGGDPLMAKDHE 175
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L ++ +L IKH++ LR H+R+PIV P RI +L Q + + I H NHP E +E
Sbjct: 176 LLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINE 235
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
+ ++ +L + +ILL+QSVLLK IND+ ILA L E I PYYLH D GTS
Sbjct: 236 QLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTS 295
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
HF ++ ++ + I++ L + ISG P + D
Sbjct: 296 HFLVSNKKAKSIISDLMKMISGFLVPRLVFD 326
>gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 328
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + AN + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C ++CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLPERMTNKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328
>gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 345
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 63 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL Y+++ ++ E+IF+GGDPL+ L +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E
Sbjct: 179 LDEIENISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRD 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD E+LA L + I PYY+H D G +HF +
Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336
>gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli]
gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli]
Length = 328
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 4/271 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ +Q +P E I + +DP+ +N +PL G++H+Y RILL + C + CR
Sbjct: 56 NPADPLLQQVLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCR 115
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR G K + K A +AYIQ + I EVI +GGDPL+ L+ + L
Sbjct: 116 YCFRRHFPYGKNK---VGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDL 172
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+I+R HSR+PIV P+R+ L+ L + H NH E ++ AI +
Sbjct: 173 AAIPHVKIVRIHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEK 232
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
I +L+Q+VLLKG+ND E L +L E I PYYLH D G +HF + E+
Sbjct: 233 CRQRKIHVLNQAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEK 292
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ ++ +L+E++ G P + + G K+
Sbjct: 293 MKPLLKALRERLPGYLVPKCVYEQAGALSKM 323
>gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
Length = 340
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 153/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL Q L++ V + H NH E + E + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q VLLKG+ND E +L + + PYYLH D G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ L ++SG P ++ G K +D +
Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338
>gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1]
Length = 328
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 ITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIPGRKDWSKAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863]
gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v]
Length = 342
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 370
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 150/269 (55%), Gaps = 2/269 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q +P E++ + DP+GD L G++ +Y R L+ L C V+CR
Sbjct: 101 NPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVHCR 160
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + L+ + A+ I + EVI +GGDPL + L ++
Sbjct: 161 YCFRRHYPYDETPRGLAG--WQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHRFA 218
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSRVP+V P+R+N ELI ++ Y+ +H NHP E AA++RL
Sbjct: 219 EIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALARL 278
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+AGI++++Q+VLL+G+ND+ E L L T V +R+ PYYL D AG +HF + G
Sbjct: 279 VDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEESRG 338
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
++++ L+ + G P Y+ ++PG K
Sbjct: 339 RELIEQLRASLPGYAIPRYVAEIPGRSSK 367
>gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253]
gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227]
Length = 342
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509]
Length = 342
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 340
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1]
gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2]
Length = 342
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073]
gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1]
gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1]
gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073]
gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1]
gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1]
gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972]
gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1]
Length = 342
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 340
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146]
gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 342
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ + E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLRQVMSDAAEFIETPGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +GT + + A+AY+ E ++ E+IF+GGDPL+ L + L
Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ H++ LR HSR+P+V P R+ L Q + ++ + + H NH E E A+ R
Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMER 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+GIND+ + LA L E I PYYLH D G +HF + +E
Sbjct: 243 LKQAGVTLLNQSVLLRGINDNADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++ L ++SG P ++ G K +D H
Sbjct: 303 ARRLMNGLLSRVSGYLVPRLTREIGGEPSKTPLDLH 338
>gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
Length = 370
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 165/294 (56%), Gaps = 13/294 (4%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77
+ +E+ +++K+++ Y LIN +PNDPI IPQ EL EE R D
Sbjct: 15 LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIPQIGEL----EEWGRLDA 70
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ +++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +D L Y
Sbjct: 71 SNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVGEEVV--RDVSEDLEY 128
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195
I++ +I V+ TGGDPL+L+ K+L+K++ +R I HVQI+R S++ +P RI +PE
Sbjct: 129 IKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGSKMVAFNPYRITEDPE 188
Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
LI+ +K+ K +YI NHP E ++EAI A++ L AG IL +Q+ L+KG+N D +
Sbjct: 189 LIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAILANQTPLIKGVNADWK 248
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L L + + + PYY+ AG F + +EE +I +SGL +
Sbjct: 249 TLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKAIMNVSGLAK 302
>gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39]
gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39]
Length = 342
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVFTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549]
Length = 328
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL
Sbjct: 49 FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEIL 166
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + IH NHP E
Sbjct: 167 EFFIENIQRIAHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ + GII+L+QS LLK INDD +L L + ++ PYY+H D +GT H
Sbjct: 227 VSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c]
gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 357
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C
Sbjct: 90 HDPLLRQVLPMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR I
Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSI 207
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L
Sbjct: 208 PHLKRLRIHSRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRG 267
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + +
Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARA 327
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P ++ ++PG K
Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354
>gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 328
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E +
Sbjct: 155 GGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
Length = 335
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P +DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL Y+++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI EL Q L + V + H NH E
Sbjct: 171 LDEIESISHIKRLRIHTRLPVVIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+N+D E+LA L + I PYY+H D G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLRRVSGYLVPRLTREVGGQPSKTPLD 328
>gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1]
gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606]
gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50]
gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1]
gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1]
gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)]
gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606]
gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)]
gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1]
gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489]
gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007]
Length = 342
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P R+ L++ + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
Length = 364
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 169/302 (55%), Gaps = 11/302 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T A++L + E+ ++ I H+ + +T +LIN +P DPI R IP EE
Sbjct: 11 ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ + D G+ +++ L G+ H+Y + +L+ H C +YCR CFR+ +VG
Sbjct: 71 DMTG--KFDTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDD---E 125
Query: 128 SKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ D A +A YI++ ++I + +GGD + S+ +++ L+ I+H+ ++RF +R P+
Sbjct: 126 TADNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPV 185
Query: 187 VDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V P RI +PEL++ L+ K +Y+ NHP E + EA A+ L NAG++L +Q+V
Sbjct: 186 VLPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTV 245
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
LLKG+NDD + L++ I PYY+ +G HF++ + EG +IV K+
Sbjct: 246 LLKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQ 305
Query: 302 SG 303
+G
Sbjct: 306 NG 307
>gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
Length = 348
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 3/282 (1%)
Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
A + P +P+DP+ +Q I K E + P DP+ D S + G++H+Y +R LL +
Sbjct: 58 AFAARMQPGDPDDPLLKQVITSKAEFLLTPGFTNDPL-DEQRSVVPGLLHKYHNRALLLV 116
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C V CR+CFRR + S + AL YI++ ++ E+IF+GGDPL+
Sbjct: 117 KGGCAVNCRYCFRRHFPYQENQG--SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHE 174
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L +L L I H++ LR HSR+P+V P RI L L ++ + + H NH E
Sbjct: 175 LDGLLTGLEEITHLKRLRIHSRLPVVIPARITEALSLRLAQSRLQILLVTHINHANEIDA 234
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
E + RL AG+ LL+QSVLL+G+ND + LANL + + PYYLH D G +
Sbjct: 235 ELAQGLHRLRRAGVTLLNQSVLLRGVNDSADELANLSHALFDAGVMPYYLHVLDKVQGAA 294
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HF + ++ ++ +L ++SG P + ++ G K +D
Sbjct: 295 HFLVPDDKATALIKTLMTQVSGYLVPRLVREIGGEASKTPLD 336
>gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5]
gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5]
Length = 342
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 340
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 341
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ P K+E N P DP+ + ++S G++H+Y R+LL + C V CR
Sbjct: 67 NPDDPLFRQVFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR S L+ ++ + L YI++ S+I EVI++GGDPL+ L + + +
Sbjct: 126 YCFRRHFPYSDNH--LNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ +R H+R+P+V P RI PELI+ + + +H NHP E + + +L
Sbjct: 184 QIDHIKRIRIHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q VLLK IND + L + + + PYYLH D G HF +
Sbjct: 244 TQAGVTLLNQGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ I+A + +++ G P + ++ G GK ID
Sbjct: 304 KDIMAQMIKRLPGFLVPKLVREIGGQPGKTPID 336
>gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1]
gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 342
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 146/267 (54%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C
Sbjct: 75 HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR
Sbjct: 135 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L
Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + +
Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P ++ ++PG K
Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339
>gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
Length = 340
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 157/282 (55%), Gaps = 5/282 (1%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
N + NP+DP+ RQ +P EE + +P DP+ + + + G++H+Y +R+L+ +
Sbjct: 61 NRMEKGNPDDPLLRQVLPVIEEFDEVPGFSTDPLEEQGND-VPGLLHKYKNRVLMIVKGG 119
Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C + CR+CFRR KG + ++ A+AY+Q+ ++ EVI +GGDPL+ LQ
Sbjct: 120 CAINCRYCFRRHFPYQDNKGGKSTWRE---AIAYLQQHPEVDEVILSGGDPLMAKDHELQ 176
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+++ + + H++ LR H+R+P+V P R+ L L + + + H NH E +E
Sbjct: 177 WLIEAIESVPHIKRLRIHTRLPVVIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDEL 236
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A ++ L +AG+ LL+Q VLL+G+ND E L NL + I PYYLH D G +HF
Sbjct: 237 RAVMATLKHAGVTLLNQGVLLRGVNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHF 296
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ E + +++ L +++SG P ++ G K +D H
Sbjct: 297 LVDDETARNLMSGLIKEVSGYLVPRLTREIGGRDSKTPLDLH 338
>gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220]
gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220]
Length = 342
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 149/273 (54%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTAQQEFVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L + + + H NH E E A+ RL
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RTAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336
>gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
Length = 340
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 154/277 (55%), Gaps = 7/277 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
NP DP+ RQ +P +E + DP+ + N +P G++H+Y +R L+ + C V C
Sbjct: 67 NPYDPLLRQVLPLSQEFEVHEGYSNDPLQEQGNETP--GLLHKYRNRALMIVKGGCAVNC 124
Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR KG L + + L YI+++S++ EVI +GGDPL+ + LQ ++
Sbjct: 125 RYCFRRHFPYQENKGNKLVWQQS---LDYIRQQSELNEVILSGGDPLMAKDEELQWLINH 181
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
+ I H++ +R HSR+P+V P RI PEL+ L + V + H NH E + E A+
Sbjct: 182 IADIPHIKRIRIHSRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMY 241
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
L AG+ LL+Q V+LKG+ND E L T + I PYY+H D G +HF ++ +
Sbjct: 242 DLKQAGVTLLNQGVMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQ 301
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ + I+A L E++SG P ++ G K +D H
Sbjct: 302 QAKAIMAGLLERVSGYLVPKLTREIGGRKSKTPLDLH 338
>gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 342
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P R+ L++ + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 345
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
L K Q+ +E + + + + A + P + DP+ Q + K+E P +DP+
Sbjct: 35 LDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDEFITAPGFSQDPL 94
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAY 137
D S + G++H+Y +R LL + C V CR+CFRR +G + + AL Y
Sbjct: 95 -DEQQSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDY 150
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL
Sbjct: 151 IRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELC 210
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
Q L ++ V + H NH E + E +++RL AG+ LL+QSVLL+GIND + L L
Sbjct: 211 QRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRGINDRVDTLVAL 270
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ I PYYLH D G +HF + +E + +V L ++SG P ++ G
Sbjct: 271 SNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLVPNLTREIGGEA 330
Query: 318 GKVKID 323
K +D
Sbjct: 331 SKTLLD 336
>gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
Length = 340
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 328
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 156/296 (52%), Gaps = 4/296 (1%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
I+ + + + AN + N NDP+ +Q +P +E I DP+ + N++ + G++
Sbjct: 37 ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R+LL C ++CR+CFR+E K + KD A YI I EVI +
Sbjct: 97 HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + L+ ++ ++ I H++ R HSR+P+V P+R+ L++ L E +
Sbjct: 155 GGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLPERMTNRLLKILSEHRLDTVLV 214
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PYY
Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+H D +GT H+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328
>gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
Length = 370
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 168/305 (55%), Gaps = 12/305 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER--EDP 77
I +E++ E++ + Y +LIN + NDPI + IP EEL EE ED
Sbjct: 15 ISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEEL----EEWGLEDA 70
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+++++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +++ + L Y
Sbjct: 71 SREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTREIDKDLDY 130
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-- 195
I++ +I V+ TGGDPL+LS +L+ +++++ I H++I+R ++ P +P RI +
Sbjct: 131 IRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPFRIISDDA 190
Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
LI+ + +GK +Y +H NHP E + +I I+ L N+G I+ +Q+ LL GIND+P+
Sbjct: 191 LSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLHGINDNPK 250
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-PFYIL 311
L+ L + I PYY+ G F + +E+ I E ISGL + P +++
Sbjct: 251 TLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLAKRPRFVM 310
Query: 312 DLPGG 316
G
Sbjct: 311 SHESG 315
>gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60]
Length = 342
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ + E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +GT + + A+AY+ E ++ E+IF+GGDPL+ L + L
Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ H++ LR HSR+P+V P R+ L Q + ++ + + H NH E E A+ R
Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND + LA L + I PYYLH D G +HF + +E
Sbjct: 243 LKQAGVTLLNQSVLLRGVNDSADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++ L ++SG P ++ G K ++D H
Sbjct: 303 ARRLMHGLLAQVSGYLVPRLTREIGGEPSKTQLDLH 338
>gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
Length = 375
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 164/292 (56%), Gaps = 10/292 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+K + +E+K++++ ++ +LIN +P DPI R IP EEL++ +
Sbjct: 17 LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIVIPTTEELDVWGKLHAS--N 74
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ + + G+ H+YPD LL + VC +YCRFCFR+ + + V ++D L YI+
Sbjct: 75 ESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIR 132
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+I V+ TGGDPL+L+ +L+K LK L I HV+I+R S++ V+P R+ +P L+
Sbjct: 133 NHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRIGSKMLAVNPFRVIDDPSLL 192
Query: 198 QCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + E GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGIND+ E
Sbjct: 193 ELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDNEET 252
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
L L+ + + PYY+ AG + IEE +V S++ K+SGL
Sbjct: 253 LRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLVESVRSKVSGLA 304
>gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933]
gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 342
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDP + L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ R HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRXRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046]
gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 342
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DPI RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114]
gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114]
Length = 340
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + DP+ + ++ L G++H+Y +R+LL + C V CR
Sbjct: 67 NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + ++ YI +I EVIF+GGDPL+ LQ ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q + + + H NH E ++E I+++ +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+QSVLLKG+ND+ + L L + I PYYLH D G +HF ++ E+
Sbjct: 243 LKLAHVTLLNQSVLLKGVNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+++++ L E +SG P ++ G K +D +
Sbjct: 303 AKQLMSELIENVSGYLVPTLAREIGGRKSKTPLDLY 338
>gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
Length = 340
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L++ V + H NH E + E + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q VLLKG+ND E +L + I PYYLH D G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ L ++SG P ++ G K +D +
Sbjct: 303 AKAIMHGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338
>gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
Length = 335
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 2/276 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P ++E + DP+ +N H+P+KG++H+Y R+LL L C ++CR+C
Sbjct: 62 DDPLLRQVLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYC 121
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S S+K + + YI +I E+I +GGDPL ++++RL L TL I
Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAI 179
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ + +R H+R+P+V P R++ L++ L ++ + + IH NH E + R
Sbjct: 180 EQLTTIRIHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARA 239
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AGI LL+Q+VLLKGIND L + + PYYLH D AG +HF +
Sbjct: 240 AGITLLNQAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIE 299
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
+ SL K+ G P + +LP KV I+ +N K
Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNKPFKVPINVYNDK 335
>gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
Length = 337
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 141/258 (54%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + +E + DP+ + + + ++H+Y +R+LL + C V CR
Sbjct: 67 NPKDPLFLQVMSSADEFIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + AL YI + +I EVIF+GGDPL+ L ++K L
Sbjct: 126 YCFRRHFPYADNKG---NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+Q LR H+R+P+V PQRI PEL + L E+ + H NHP E AAI +
Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG++LL+QSVLLK INDD +IL L + I PYYLH D G SHF + E+
Sbjct: 243 LKQAGVVLLNQSVLLKNINDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEK 302
Query: 290 GQKIVASLKEKISGLCQP 307
I L+ SG P
Sbjct: 303 ALNIYKILQSITSGYLVP 320
>gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4]
Length = 340
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G]
Length = 320
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DPI RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 45 NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314
>gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
Length = 342
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q + K E + P DP+ + N++ + ++H+Y +R L+ + C V CR
Sbjct: 67 DPQDPLLLQVLTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + A+ YI+ +++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P+RI L Q L + V + H NH E + AA+ +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L NAG+ LL+QSVLL+G+N+D + LANL + I PYYLH D G +HF ++ +E
Sbjct: 243 LKNAGVTLLNQSVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ L K+SG P ++ G K +D
Sbjct: 303 ARLLIQQLLGKVSGYLVPKLAREIGGEPSKTLLD 336
>gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
Length = 340
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVI +GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
Length = 284
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 155/284 (54%), Gaps = 5/284 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKSGCA 59
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ + L +
Sbjct: 60 VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWL 116
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L + I H++ LR H+R+P+V P RI L Q L + V + H NH E +
Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRN 176
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 236
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
+E ++++ L ++SG P ++ G K +D I+
Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQS 280
>gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1]
gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1]
Length = 342
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ +DP+ Q + +++E P DP+ D + + G++H+Y +R LL + C V CR
Sbjct: 67 DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + +AAL YI + ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHF--PYQDNPGNKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI +L Q L E V + H NH E +E A+S L
Sbjct: 184 KIPHLKRLRIHSRLPVVIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ EE
Sbjct: 244 KRAGVTLLNQSVLLRGINDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+++V +L ++SG P ++ G K +D
Sbjct: 304 RQLVRALLSQVSGYLVPKLAREIGGEPSKTPLD 336
>gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 348
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 135/242 (55%), Gaps = 7/242 (2%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I P +P+DP+ RQ +P E DP+GD G++H+Y R+LL C
Sbjct: 61 IRPGDPDDPLLRQVLPLAAEHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACA 120
Query: 107 VYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
++CR+CFRR SQ G D A LA++ ++ EVI +GGDPL LS +RL
Sbjct: 121 IHCRYCFRRHFPYTESQAG----RDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLAT 176
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ + L V+ LR H+R+P+V P RI P L+ LK + V++ IH+NH E
Sbjct: 177 LTEALAQRPQVRRLRLHTRLPVVLPDRITPGLMALLKGPWEVVWV-IHSNHAQELDSTVA 235
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A++RL AG LL+Q+VLL+ INDD + LA L R +L + PYYLH D G +HF
Sbjct: 236 GALARLREAGHWLLNQTVLLRRINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFE 295
Query: 285 LT 286
+T
Sbjct: 296 VT 297
>gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 358
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 174/300 (58%), Gaps = 11/300 (3%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
NL + E+ + IK + H+ TP A+L++ +P PI +Q +P +E + ++
Sbjct: 24 NLTESER-EAIKTLDTHW--GTTPYFASLMDKDDPECPIRKQVVPSLQESHNKYGMKDYL 80
Query: 78 IGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ N + + I +Y DR+ + C +YCR CFR+E+V S + + +
Sbjct: 81 VWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKELVVSHDLKL--DFNVDD 138
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+ +I++ ++ +V+ TGGDPL+LS ++++ ++++LR I HV+++R SR+PIV P RI
Sbjct: 139 GIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEMIRIGSRLPIVLPHRIT 198
Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L P+++ NHP E +++ A+ L +AG+ + +Q+VLLKGINDD +
Sbjct: 199 DNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVNVGNQAVLLKGINDDVQ 258
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311
+ +L + + RI+PYYL + + A G HFR +E+G +++ L+ +GL QP Y++
Sbjct: 259 TIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRDGLRGHTTGLAQPMYVI 318
>gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 340
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIERVSGYLIPKLTREIGGKPSKTPLDLH 338
>gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118]
gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118]
Length = 393
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 6/309 (1%)
Query: 25 IDEIKE-ISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNN 82
I+ + E + ++IA+TP +A L++ +PN PI Q++P EE D +G+
Sbjct: 50 IENVNETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEG 109
Query: 83 HS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ P +VHRYP R+L + + C CRFC R+ MV G+V + + EA++ YI
Sbjct: 110 DTVPGTSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGN 168
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200
I +V+ +GGDP + +RL +L LR HV+ LR SR+ + P R+ PEL L
Sbjct: 169 QDIEDVLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVL 228
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E + + IH NHP E + + + AGI++ Q+V LKG+NDD ++ L
Sbjct: 229 -EKHRVQMVNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQ 287
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+E+ ++PYY++ D+ G HF + ++ L+ ISG P +++D GG GK+
Sbjct: 288 TIEMGVRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKL 347
Query: 321 KIDTHNIKK 329
I +++
Sbjct: 348 PITPSYVRE 356
>gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
Length = 526
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I LTP + +L++ P +DPI +QF+P + I+P+ + D + + + SP+ G+VH
Sbjct: 114 AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 171
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145
RYP R L +CPVYCRFC R VG+ TV S K E +I++ +
Sbjct: 172 RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 231
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195
+++ +GGD L +++++ L I H++ +R S+ V P RI +P E
Sbjct: 232 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 291
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ +E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L
Sbjct: 292 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 351
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPG
Sbjct: 352 DLIKTLADINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPG 411
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
G GK + T K G +Y
Sbjct: 412 GGGKRLVSTVESYKNGEATY 431
>gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5]
gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5]
Length = 335
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P +E + DP+ +N H+P+KG++H+Y R+LL + C ++CR+C
Sbjct: 62 DDPLLRQVLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYC 121
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR+ S S+K + + YI +I EVI +GGDPL ++++RL L TL I
Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAI 179
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ +R H+R+P+V P R++ L++ L ++ + + IH NH E + R
Sbjct: 180 GQLTTIRIHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARA 239
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AGI LL+Q+VLLKGIND L + + PYYLH D AG +HF E +
Sbjct: 240 AGITLLNQAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIE 299
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
+ SL K+ G P + +LP KV I+ +N K
Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNEPFKVPINVYNNK 335
>gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
Length = 335
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +P+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGDPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L I H++ LR H+R+P+V P RI L Q L ++ V + H NH E +
Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+NDD ++LA L + I PYY+H D G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328
>gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans']
gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 342
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ RQ I +EE + P DP+ D HS + G++H+Y +R L+ + C V CR
Sbjct: 67 DPDDPLLRQVITAREEFDPTPGYSTDPL-DEQHSVVPGLLHKYQNRALMLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + A AYI++ ++ E+I +GGDPL+ L +++ L
Sbjct: 126 YCFRRHFPYQENQG--NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI L Q L V + H NH E +++RL
Sbjct: 184 EIPHLKTLRIHSRLPVVIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
NA + LL+QSVLL+G+ND + LA L I PYYLH D G +HF + ++
Sbjct: 244 RNARVTLLNQSVLLRGVNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L EK+SG P ++ G K +D
Sbjct: 304 REIMQQLLEKVSGYLVPRLAREIGGERSKTPLD 336
>gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017]
gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T]
gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671]
gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70]
gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71]
gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71]
gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218]
gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304]
Length = 342
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019]
gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019]
Length = 342
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227]
Length = 342
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGKPSKTPLD 336
>gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp.
novicida U112]
gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112]
gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
Length = 328
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 4/284 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL
Sbjct: 49 FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ ++ ++ I H++ LR H+R+PIV P+R+ +L++ L E + IH NHP E
Sbjct: 167 EFFIENIQRIAHIKRLRIHTRIPIVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ + GII L+QS LLK INDD +L L + ++ PYY+H D +GT H
Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKYINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ ++ + I+ L E SG P ++PG K + H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328
>gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395]
gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2]
gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 340
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---GKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627]
gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627]
gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431]
Length = 342
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEYIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A]
gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS]
gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A]
gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22]
gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171]
gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11]
gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989]
gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9]
gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088]
gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1]
gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7]
gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1]
gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1]
gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1]
gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1]
gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7]
gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9]
gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS]
gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A]
gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A]
gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22]
gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171]
gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989]
gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088]
gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1]
gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1]
gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7]
gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1]
gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1]
gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1]
gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7]
gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W]
gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1]
gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B]
gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14]
gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68]
gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357]
gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120]
gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3]
gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167]
gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9]
gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6]
Length = 342
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
Length = 340
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++A L E++SG P ++ G K +D H
Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338
>gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301]
gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 342
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299]
gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299]
Length = 342
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQEEYIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
G+ L+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 244 RRVGVTQLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180]
gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272]
Length = 320
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 45 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314
>gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 340
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVI +GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 340
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D +
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLY 338
>gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H]
gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea
34H]
Length = 342
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 150/271 (55%), Gaps = 3/271 (1%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ +Q +P E + DP+ +++ + +G++H+Y R+L+ + C + CR+C
Sbjct: 73 DDPLLKQVMPLSSEFLLSDGYTADPLNEHD-TVAEGLLHKYKSRVLMIVKTACAINCRYC 131
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR + K ++AL YI ++I EVIF+GGDPL+ + L +++ + I
Sbjct: 132 FRRHFPYQDNSP--NKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQI 189
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
HV LR HSR+P+V P RI +L+ LK + + +H NHP E ++E I A+ L
Sbjct: 190 PHVSRLRIHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLRE 249
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
A I L +QSVLL+GINDD ++L NL + I+PYYLH D G +HF + +
Sbjct: 250 ARIPLFNQSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVA 309
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
IV ++ + G P + ++ G K I+
Sbjct: 310 IVKTMLASLPGFLMPKLVREIAGQANKTPIN 340
>gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 163/287 (56%), Gaps = 10/287 (3%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++EI + + + +T +L++ ++P+DPI + +P +EELN++ D G+ ++ +
Sbjct: 31 LQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEELNLVGSY--DTSGERENTIMP 88
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G+ H+Y L+ + C +YCR+CFR+ +VG ++ + A YI+E +I V
Sbjct: 89 GLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIMHRFN--GAAKYIEEHEEINNV 146
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204
+ +GGDP ILS L + L+ L I H+ +RF +RVP+ P RI +
Sbjct: 147 LISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPVTFPDRILKDDKLLTLLGNNSH 206
Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ +Y+ NHP E + +A A+SRL AG+I+ +Q+VLLKG+NDDPE LA L V
Sbjct: 207 ENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQTVLLKGVNDDPETLAELQNKLV 266
Query: 263 ELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
+ + PYYL + S+F++ + +G +IV + KE+++G + F
Sbjct: 267 SIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKERLNGHSKRF 313
>gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
Length = 340
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 153/277 (55%), Gaps = 7/277 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
NP DP+ RQ +P +E + DP+ + +N P G++H+Y +R+LL + C V C
Sbjct: 67 NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNDQP--GLLHKYKNRVLLIVKGGCAVNC 124
Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR KG S + ++ YI +I EVIF+GGDPL+ LQ +++
Sbjct: 125 RYCFRRHFPYQDNKG---SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEH 181
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
+ I H++ LR HSR+P+V P RI L Q K+ + + H NH E ++ I+++
Sbjct: 182 IEAIPHIKRLRIHSRLPVVIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMK 241
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L A + LL+QSVLLKG+ND+ + L L + I PYYLH D G +HF ++ E
Sbjct: 242 KLKLAHVTLLNQSVLLKGVNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDE 301
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ ++++ L E +SG P ++ G K +D +
Sbjct: 302 KAKQLMGELIENVSGYLVPTLAREIGGRKSKTPLDLY 338
>gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
Length = 340
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+A L E++SG P ++ G K +D
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLD 336
>gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 443
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I LTP + +L++ P +DPI +QF+P + I+P+ + D + + + SP+ G+VH
Sbjct: 31 AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 88
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145
RYP R L +CPVYCRFC R VG+ TV S K E +I++ +
Sbjct: 89 RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 148
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195
+++ +GGD L +++++ L I H++ +R S+ V P RI +P E
Sbjct: 149 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 208
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ +E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L
Sbjct: 209 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 268
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPG
Sbjct: 269 DLIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPG 328
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
G GK + T + G +Y
Sbjct: 329 GGGKRLVSTMESYQNGEATY 348
>gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 342
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q + +EE + P+ DP+ D S + G++H+Y +R LL + C V CR
Sbjct: 67 DPRDPLLLQVLTAREEFAVTPDFSTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + AL YI + +I E+IF+GGDPL+ L ++ +
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR H+R+P+V P+RI L L ++ V + H NH E E +++R
Sbjct: 183 ESIPHVKRLRIHTRLPVVIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSV L+ IND+ E LA+L + I PYY+H D G +HF + EE
Sbjct: 243 LKQAGVTLLNQSVFLRDINDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ I+ L K+SG P ++ G K +D
Sbjct: 303 AKIIMRELLSKVSGYLVPRLTREIGGEPSKTPLD 336
>gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
Length = 338
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q +P EL P DP+G+ + L G++H+Y R LL L C V+CR
Sbjct: 63 DPLDPLLLQVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + ++D A YI + ++ E+I +GGDPL LS+++L L+ L
Sbjct: 123 YCFRRHF--PYQENLPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLE 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I + LR HSRVPIV P RI+ ELI L+ + + + +H+NH E + + + L
Sbjct: 181 SIPQIDTLRIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHEL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + +L+Q+VLLKGIND E+L NL E R+ PYYLH D G HF L +
Sbjct: 241 ARRQVTVLNQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKI 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++ + + G P + ++ G K +
Sbjct: 301 DEVYKEVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
Length = 342
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C
Sbjct: 75 HDPLLRQVLPIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR ++ T + E A A+++ I EVI +GGDPL LS +L ++ LR
Sbjct: 135 FRRHFPYAED-TASHDRWRETA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L
Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + +
Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P ++ ++PG K
Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339
>gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 326
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 150/278 (53%), Gaps = 3/278 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + +++EL+ + DP+ ++N + +KG++H+Y R+LL L
Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CR+CFRR + + + AYI S I EVI +GGDPL+ ++ L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVL 165
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L++L I H+ LR H+R+PIV P+RI+ L+ L I +H NHP E E
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
F + + Q I L+ + G P + PG K
Sbjct: 286 FDMPLLRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323
>gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora]
Length = 517
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 179/339 (52%), Gaps = 29/339 (8%)
Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I +TP I + +N +P DPI RQF+P K + LP+ + D + + SP+KG+VH
Sbjct: 176 AIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLVH 233
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
RY D+ L VCP YC FC R VG+ TV + + E A AYI+ + ++
Sbjct: 234 RYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRPELQ 293
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-- 200
+++ +GGD L ++L + + L + +++ RF S+ V P RI E + L
Sbjct: 294 DIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNALID 353
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
K+AGK + + H N+P E S + A +L G+++ +Q+VLL+G+NDD E ++
Sbjct: 354 ISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYETMS 413
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L+R + I PYY++ D+ H R ++ + A ++ I+G P +++DLPG
Sbjct: 414 TLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPG 473
Query: 316 GYGKVKIDTHN--IKKVGNGSY---CIT--DHHNIVHDY 347
G GK +H +K G ++ +T D N V++Y
Sbjct: 474 GGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512
>gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
Length = 342
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPEDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
Length = 340
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++A L E++SG P ++ G K +D H
Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338
>gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
Length = 326
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + +++EL + DP+ ++N + +KG++H+Y R+LL L
Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L++L I H+ LR H+R+PIV P+RI+ L+ L I +H NHP E E
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ A S L A LL+QSVLL GINDD IL+ L T + I PYYLH D G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAH 285
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
F + + Q I L+ + G P + PG K
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323
>gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 366
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 9/292 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ K + +++K+++ + NLI +PNDPI R IP +EL + D
Sbjct: 16 LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMDEL--IEWGELDASN 73
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ ++ G+ H+Y D L+ + VC CRFCFR+ + + ++ D E L YI+
Sbjct: 74 EHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREIMI--DVEPGLEYIK 131
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ +I V+ +GGDPL+LS +L+ ++ LR I HVQI+R +++ +P RI +P+LI
Sbjct: 132 KHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMVAFNPYRIIDDPKLI 191
Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ LK+ P +YI NHP E ++ AI AI+ L AG L +Q+ L++GIND PE L
Sbjct: 192 ELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQTPLIRGINDSPETL 251
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
A L R + + PYY+ G + + IEEG +I +SGL +
Sbjct: 252 AELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAMVSGLAK 303
>gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2]
gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2]
Length = 359
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 24/302 (7%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E++ I + + TP A L++P +P P+ RQ IP +EL E+ G N
Sbjct: 27 EELKAINTLDTRW--GTTPYFAALMDPDDPCCPVRRQIIPSLKEL-------ENTYGIKN 77
Query: 83 HSPL-----------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
+ I +Y DR+ + C YCR CFRRE+V Q+ + D
Sbjct: 78 YLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRLKL--RFDL 135
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ + +I++ +I +V+ TGGDP +LS + L ++ LR I HV+++RF +R I PQR
Sbjct: 136 DQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTRTIINLPQR 195
Query: 192 INPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
I +L++ L + + P++I NHP E +++ A+ L G+ + +Q+VLLKGINDD
Sbjct: 196 ITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAVLLKGINDD 255
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFY 309
+ L + V RI+PYYL + + A G HFR +E+G +++ L+ +GL +P Y
Sbjct: 256 VDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHTTGLARPTY 315
Query: 310 IL 311
++
Sbjct: 316 VI 317
>gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 342
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 148/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ Q I EE + P DP+ D S + G++H+Y +R LL + C + CR
Sbjct: 67 DPNDPLLLQVITTPEEFTLTPGFSTDPL-DEQRSAVPGLLHKYRNRALLLVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + ++ + AL YIQ+ ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI L L ++ V + H NH E + ++
Sbjct: 183 EKISHIKRLRIHTRLPVVIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMIL 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AGI LL+QSVLL+GIN+ + LA+L + I PYY+H D G +HF + EE
Sbjct: 243 LKQAGITLLNQSVLLRGINNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ L KISG P ++ G K +D
Sbjct: 303 AKGLIRELLTKISGYLVPRLAREIGGEPSKTPLD 336
>gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
Length = 326
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + +++EL + + DP+ ++N + +KG++H+Y R+LL L
Sbjct: 49 FAERMQKGNPKDPLLLQVLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L++L I HV LR H+R+PIV P+RI+ L+ L I +H NHP E E
Sbjct: 166 EELLQSLEEISHVHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ A S L A LL+QSVLL G+NDD IL+ L + I PYYLH D G++H
Sbjct: 226 VLRACSDLKKATCYLLNQSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
F + + Q I L+ + G P + PG K
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323
>gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401]
gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 342
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PI P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIAIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
Length = 340
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + + + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+ND L T + I PYYLH D G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
Length = 340
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + ++ E+I +GGDPL+ + L +++ +
Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ LR HSR+P+V P R+ EL+ L V + H NH E + ++R
Sbjct: 183 GAISHVKRLRIHSRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q V+LKG+ND L T + I PYY+H D G +HF ++ E
Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I++ L E++SG P ++ G K +D H
Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338
>gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
Length = 342
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 142/267 (53%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ ++P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+R++ L+ L+ PV IHANH EF AA+ + +
Sbjct: 193 GHIKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRD 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ L ++SG P + ++PG GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339
>gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999]
Length = 351
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 6/293 (2%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGIV 90
+++ + +L+ ++ +DP+ +Q +P +E + PE DP + + ++ KG++
Sbjct: 55 FALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIVDPEFSLDPLKEQVNETTNTSTKGML 114
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y +R+LL L C V CR+CFRR Q + +D +I+ +I EVI +
Sbjct: 115 HKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN--NKQDWLDVFEHIKTDPKIDEVILS 172
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + + + L I ++ +R H+R+P+V P R+ PEL+ L ++ K +
Sbjct: 173 GGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLPVVLPYRVTPELLIALAQSSKQTIMV 232
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H NHP E S E I ++ L AG+ +L+Q+VLLKGIND L RI+PYY
Sbjct: 233 LHINHPKEISSELIQKVALLHEAGVTVLNQAVLLKGINDSAHTQIALNEALFSARIQPYY 292
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
LH D G +HF ++ + I+ + K SG P + ++ G K +D
Sbjct: 293 LHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYMVPKLVREIGGESSKTPVD 345
>gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
Length = 345
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
Q+ +E + + + A + P + DP+ Q + ++E P DP+ D H
Sbjct: 40 QLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIATPGFSHDPL-DEQH 98
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
S + G++H+Y +R LL + C V CR+CFRR +G + + AL YI++
Sbjct: 99 SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL + L +
Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELCRRLAQ 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ V + H NH E E ++RL AG+ LL+QSVLL+G+ND+ LA L
Sbjct: 216 SPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRGVNDNANTLAALSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYYLH D G +HF + ++ + +V L ++SG P ++ G K +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLVPSLAREIGGEASKTLL 335
Query: 323 D 323
D
Sbjct: 336 D 336
>gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
Length = 326
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + +++EL + DP+ +NN + +KG++H+Y R+LL L
Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSENN-TLIKGLLHKYRGRVLLTLT 107
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L++L I H+ LR H+R+PIV P+RI+ L+ L I IH NHP E E
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
F + + + I L+ + G P + PG K
Sbjct: 286 FDMPLPRARSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323
>gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
Length = 340
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPLI L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + + + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++ L E++SG P ++ G K +D H
Sbjct: 303 ARQLMGGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338
>gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103]
gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103]
Length = 342
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR
Sbjct: 67 DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L E V + H NH E E A+ R
Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE
Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ SL ++SG P ++ G K +D
Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336
>gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
Length = 340
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P +E I P DP+ + N+S G++H+Y +R LL + C + CR
Sbjct: 67 NPHDPLLRQVLPLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG L + + L YI + Q+ EVI +GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYQDNKGNKLVWQQS---LDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL+ E V + H NH E + E ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+QSVLLKG+ND L + I PYYLH D G +HF ++ E+
Sbjct: 243 LRAEKVTLLNQSVLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+A L E++SG P ++ G K +D H
Sbjct: 303 ARTIIAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355]
Length = 342
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR
Sbjct: 67 DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L E V + H NH E E A+ R
Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE
Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ SL ++SG P ++ G K +D
Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336
>gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 342
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
FRR + T +D A+A I I EV+ +GGDPL L+ +L ++ L
Sbjct: 135 FRRHFPYAEETATRDGWRD---AVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAA 191
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+ H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF AA L
Sbjct: 192 VPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLR 251
Query: 232 NAGIILLSQSVLLKGINDDPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG LL+Q+VLL+G+ND + LA L R+FV + PYYLH D AG +HF +
Sbjct: 252 EAGAQLLNQAVLLRGVNDSVDALAALSERSFVA-GVLPYYLHQLDRVAGVAHFEVDDARA 310
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ + A L ++SG P + ++PG GK
Sbjct: 311 RALHAELAARLSGYLVPRLVREIPGDTGK 339
>gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b]
Length = 326
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + NP DP+ Q + +++EL + DP+ ++N + +KG++H+Y R+LL L
Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L++L I H+ LR H+R+PIV P+RI+ L+ L I IH NHP E E
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H
Sbjct: 226 VLQACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
F + + Q I L+ + G P + PG K
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323
>gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 340
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + ++ E+I +GGDPL+ + L +++ +
Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P R+ EL+ L V + H NH E + ++R
Sbjct: 183 GAISHIKRLRIHSRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q V+LKG+ND L T + I PYY+H D G +HF ++ E
Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I++ L E++SG P ++ G K +D H
Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338
>gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 345
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 10/302 (3%)
Query: 28 IKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
IK Y+ AL P+ A + P +P DP+ Q + +E DP+ +
Sbjct: 39 IKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDEFVHTSGFSADPLCEQA 98
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141
+ L G++H+Y +R+L+ + C V+CR+CFRR + KG S + E YI++
Sbjct: 99 -AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG---SQVNREQVFNYIRKH 154
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+++ EVIF+GGDPL+ L ++ L I H++ LR H+R+PIV P RI L +
Sbjct: 155 TELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPIVIPSRITTRLCESFS 214
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + + H NHP E + ++ RL AG+ LL+Q+VLLK +N++ EILA L
Sbjct: 215 NSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKDVNNNAEILAQLSNRL 274
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
I PYYLH D G +HF + E ++I+ +L ++SG P ++ G K+
Sbjct: 275 FNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLVPRLTREVAGQPSKIP 334
Query: 322 ID 323
ID
Sbjct: 335 ID 336
>gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
Length = 340
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 148/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + EDP+ + + + + G++H+Y +R LL + C V CR
Sbjct: 67 NPYDPLLRQVLPLSQEFEVHNGYSEDPLEEQD-AAVPGLLHKYHNRALLIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + AL YI +I E+I +GGDPL+ L +++
Sbjct: 126 YCFRRHFPYEDNKG---GKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKA 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P+RI EL Q LK+ + H NH E + E A+++R
Sbjct: 183 ESIHHLKTLRIHSRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
+ N G LL+Q VLLKG+ND + L + I PYYLH D G +HF ++ ++
Sbjct: 243 IKNTGTTLLNQGVLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDD 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ L +++SG P + G K +D H
Sbjct: 303 AKAIIQGLIKRVSGYLVPKLTREEGGRASKTPLDLH 338
>gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
Length = 327
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ +DP+ Q + +++E P DP+ D + + G++H+Y +R LL + C V CR
Sbjct: 52 DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 110
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + +AAL YI E ++ E+IF+GGDPL+ L ++ L
Sbjct: 111 YCFRRHF--PYQDNPGNKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALE 168
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI +L Q L + V + H NH E E ++ RL
Sbjct: 169 QIPHLKRLRIHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRL 228
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ +E
Sbjct: 229 KRAGVTLLNQSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEA 288
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+++V SL ++SG P ++ G K +D
Sbjct: 289 RQLVRSLLSQVSGYLVPKLAREIGGEPSKTPLD 321
>gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
Length = 340
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P ++E + DP+ + + + G++H+Y +R+LL + C V CR
Sbjct: 67 NPHDPLLRQILPLEQEFEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + +LAYI +I EVI +GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+Q VLLKGIND + L +L + I+PYYLH D G +H+ + E
Sbjct: 243 LKQANVTLLNQGVLLKGINDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDET 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++A L ++SG P ++ G K +D
Sbjct: 303 ARQLMAGLITQVSGYLVPKLTREIGGRASKTPLD 336
>gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 364
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 168/304 (55%), Gaps = 12/304 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
LTS + + N EQI E+K++++ Y LIN ++P+DPI R +P EEL
Sbjct: 7 LTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRIILPDFEEL 63
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ + D ++ ++ G+ H+Y D LL + VC +CRFCFR+ + ++ V++
Sbjct: 64 DEWGDL--DASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFSTENKEVVN 121
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D + YI++ +I V+ TGGD LILS ++L +++ LR I HV I+RF S++
Sbjct: 122 --DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRFGSKMVAF 179
Query: 188 DPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+P RI +P+L +K+ P +YI H NHP E ++EAI ++ L +AG ++ +Q+
Sbjct: 180 NPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGAVICNQTP 239
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+++G+ND E++ L R + I PYY+ G + + E G +I + +S
Sbjct: 240 MIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFKKSIDSVS 299
Query: 303 GLCQ 306
GL +
Sbjct: 300 GLAK 303
>gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1]
gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter
sp. ADP1]
Length = 338
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 5/273 (1%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
S+ + + + N + +P DP+ Q +P EL PE DP+G+ + L G++H
Sbjct: 44 SDTFKLRVPRAFVNKMQKADPFDPLLLQVLPHHLELEDHPEFVTDPLGEEEANQLPGVLH 103
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y R LL L C V+CR+CFRR + + + D YIQ+ I EVI +G
Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNNDWPQIQNYIQQHPLINEVILSG 161
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL L++ +L+ ++ L + V+ILR HSRVPIV P RI+ EL+ L+ + + + +
Sbjct: 162 GDPLTLTNHKLKIWIERLESLPQVKILRIHSRVPIVIPNRIDEELLSLLENSRLRIIMVV 221
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H+NH E + + +L+ + + +Q+VLLKG+ND + L L + + R+ PYYL
Sbjct: 222 HSNHAAELDDFTCNQLHKLSLRNVTVFNQAVLLKGVNDSAQTLIELSQRLFDARVMPYYL 281
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
H D G HF L E K+ + KE ++GL
Sbjct: 282 HVLDKVKGAQHFDL---ESSKVDSLYKEVLAGL 311
>gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
Length = 338
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR
Sbjct: 63 DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + D E YI++ I EVI +GGDPL L+++++ L+ L
Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ILR HSRVPIV P R++ ELI LK + + + +H+NH E + + + +L
Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ I +L+Q+VLLKG+ND + L L + R+ PYYLH D G HF L E
Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I + + + G P + ++ G K +
Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
Length = 340
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE I DP+ + N+S + G++H+Y +R L+ + C + CR
Sbjct: 67 NPFDPLLRQVLPLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + S + +L YIQ+ +I EVI +GGDPL+ + L ++ +
Sbjct: 126 YCFRRHFPYDENKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI P L L+ + H NH E +E +++ L
Sbjct: 184 DIPHIKRLRIHSRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q V+LKG+ND + L + + + PYY+H D G +HF ++ ++
Sbjct: 244 KRAGVTLLNQGVMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+A + EK+SG P ++ G K +D H
Sbjct: 304 KIIMAGVMEKVSGYLVPKLTREIGGRASKTPLDLH 338
>gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 347
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 7/289 (2%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
++I + +A + + DP+ +QF+P K E +DP+GD ++H+Y
Sbjct: 61 FAINVPYRLAQKMTKGSLEDPLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYR 120
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R+LL C ++CR+CFR+ S T L D I++ S I EVI +GGD
Sbjct: 121 GRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDL------IRQDSSIHEVILSGGD 174
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL LS+ L K+ + L I H++ +RFH+R PI P+RI+ + ++ K ++ IH
Sbjct: 175 PLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHC 234
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E E+ + L G +LL+QSVLLKG+ND E+L L + I PYYLH
Sbjct: 235 NHPLELDEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQ 294
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
D G SHF L +EG ++ L +++SG P Y+ ++ G K I
Sbjct: 295 LDRVKGASHFELGEKEGAALIQELSKRLSGYAIPRYVREIAGEAHKTPI 343
>gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638]
gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1]
gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1]
gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1]
gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736]
gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70]
gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736]
gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638]
gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1]
gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1]
gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1]
gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70]
gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520]
gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736]
Length = 342
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ L +SG P ++ G K +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336
>gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 340
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + P DP+ + ++ + G++H+Y +R L+ + C V CR
Sbjct: 67 NPKDPLLRQVLPLSDEFEVHPGYSNDPLEEQDNE-VPGLLHKYRNRALMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+I H++ LR HSR+P+V P R+ EL Q L+ + + + H NH E ++E + +L
Sbjct: 184 HIPHIKRLRIHSRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q VLLKG+ND E L + I PYYLH D G +H+ ++ EE
Sbjct: 244 KRAGVTLLNQGVLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ L ++SG P ++ G K +D H
Sbjct: 304 KAIMRGLITRVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244]
gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244]
Length = 338
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR
Sbjct: 63 DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYRSRFLLTLTGACAIHCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + D E YI++ I EVI +GGDPL L+++++ L+ L
Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ILR HSRVPIV P R++ ELI LK + + + +H+NH E + + + +L
Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ I +L+Q+VLLKG+ND + L L + R+ PYYLH D G HF L E
Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I + + + G P + ++ G K +
Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121
gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 355
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 9/266 (3%)
Query: 64 KEELNILPEER-------EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
K ++ P+ER DP+G++ + +VH+Y +R+L+ C +CR+CFRR
Sbjct: 60 KRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANRVLMLATGRCFSHCRYCFRRG 119
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ + G + +++ E + Y++ + E++ +GGDPL S ++ + + LR +
Sbjct: 120 FIAQRAGWI-PNEEREKIITYLRATPSVKEILVSGGDPLTGSFAQVTSLFRALRSVAPDL 178
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
I+R +R PQ PELI L+E KPV+I H NHP E A + AG+
Sbjct: 179 IIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHPAELGSTQRAVLEACVGAGLP 237
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ SQSVLL+G+ND E L L L +KP YL DLA GT FR+ + + + +
Sbjct: 238 VQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDLAPGTGDFRVPLSDTLALWRT 297
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
LKE++SGL P +DLPGG GK +
Sbjct: 298 LKERLSGLSLPTLAVDLPGGGGKFPL 323
>gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
Length = 407
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 164/295 (55%), Gaps = 10/295 (3%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++ I +Y + + P +L+NP++P+DP+ R IP EEL+ D G++ + L
Sbjct: 40 LESIQENYPLLVNPYYLSLVNPNDPDDPVRRMCIPAAEELDF--SGLADTSGESKSTVLP 97
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G+ H+Y + L+ + C +YCR CFRR +VG + ++ +A YI++ +I V
Sbjct: 98 GLQHKYAETALVLSTNQCAMYCRHCFRRRLVGRDADETV--RNIDAVADYIRDHEEITNV 155
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGK 205
+ +GGD L+ S++ L + L+ L I H++ +R +R+P+V PQRI +P LI L
Sbjct: 156 LISGGDALMNSNETLFRYLEALAPIPHLKTIRLGTRIPVVLPQRITDDPGLIDLLSGFNH 215
Query: 206 PV--YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
V ++ NHP E + E+ AI L GI + +Q+VLLKG+ND PE LA LM V
Sbjct: 216 IVQLHVVTQFNHPNEITPESRDAIRILLELGIPVRNQTVLLKGVNDTPETLARLMDDLVG 275
Query: 264 LRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
+ I PYY+ G + F++ I G IVA + ++SGL + F YI+ G
Sbjct: 276 IGIVPYYVFQCRPTVGVKNRFQVPILTGCNIVAQARAQLSGLAKSFRYIMSHDAG 330
>gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 326
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 144/281 (51%), Gaps = 5/281 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + L +A I + +DPI +QF+P E L DP+GD + ++H+Y
Sbjct: 43 FPLNLPKRLAEKIKKNTLDDPILKQFLPTLAEQKQLAGFTLDPVGDTQFTKAPKLLHKYN 102
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R L+ C + CRFCFR+ + K + L I + E+I +GGDP
Sbjct: 103 GRALIVCTSACVMNCRFCFRQNF-----DYEVQEKGFQKELELIAADETLQEIILSGGDP 157
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L LS L +L L +IKHV+ +RFH+R PI P+RI+ + + + +H N
Sbjct: 158 LSLSDTVLVHLLDALSHIKHVKRVRFHTRFPIGIPERIDDAFLNLFENRPFITWFVLHTN 217
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + + L G+ILL+QSVLLKG+ND P++L L V I PYYLH
Sbjct: 218 HPNELDDHIFHHLHLLQRKGVILLTQSVLLKGVNDCPKVLCELFNQLVNRGIIPYYLHQL 277
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
D G +HF ++ E G++++ + + + G P Y+ ++ G
Sbjct: 278 DRVQGGAHFEVSEERGKELIQEIAKSLPGYAVPKYVREIAG 318
>gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)]
Length = 371
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 2/276 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q +P K E + DP+ +N +P+KG++H+Y R+L+ + C ++CR
Sbjct: 96 DPKDPLLLQVLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCR 155
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFR+ +G + S+ E YI + +I EV+ +GGDPL LS++RL L L
Sbjct: 156 YCFRQHF--DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALE 213
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ + +R H+R+PIV P+R++ EL+ L+ + + + +H NH E E + +
Sbjct: 214 ALPQISTIRIHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQA 273
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
GI LL+Q+VLL GIND + +L + PYYLH D G +HF +T
Sbjct: 274 RQKGITLLNQTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRA 333
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
++ + +++ G P + +LP K +D +N
Sbjct: 334 VELYWEMLQQLPGYLVPKLVQELPNRPFKTPVDLYN 369
>gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 340
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P E P DP+ + N++ + G++H+Y +R LL + C + CR
Sbjct: 67 NPYDPLLRQVLPLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF + +E
Sbjct: 243 LRAINVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A L E++SG P ++ G K +D H
Sbjct: 303 ARQIMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338
>gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 344
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 155/291 (53%), Gaps = 5/291 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRY 93
+++ + A + +PNDP+ Q + E P DP+ + + + + G++H+Y
Sbjct: 51 FALRVPYAFARRMKKGDPNDPLLLQVMTSASEFITTPGYSTDPLEEQDDAIAVPGLLHKY 110
Query: 94 PDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+R LL + C V CR+CFRR +G + + AL YI+++ ++ E+IF+GG
Sbjct: 111 INRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQPELDEIIFSGG 167
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL+ L +L + I H++ LR HSR+P+V P RI L + ++ + + H
Sbjct: 168 DPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLPVVIPARITETLTKRFSQSHLQILLVTH 227
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NH E E A++RL +AG+ LL+Q VLL+G+ND+ + LA L + I PYYLH
Sbjct: 228 INHANEIDRELCDAMTRLKHAGVTLLNQGVLLRGVNDNADTLAALSNALFDAGIMPYYLH 287
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ +E + I+ L K+SG P ++ G K ID
Sbjct: 288 VLDRVQGAAHFMVSDDEARVIMRELMTKVSGYMVPKLTREIGGEPSKTPID 338
>gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
Length = 340
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 147/274 (53%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P ++E + DP+ + + + G++H+Y +R+LL + C V CR
Sbjct: 67 NPHDPLLRQILPLEQEFEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + +L YI +I EVI +GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+Q VLLKG+ND + L +L + I+PYYLH D G +HF + E
Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDET 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++A L ++SG P ++ G K +D
Sbjct: 303 ARQLIAGLITQVSGYLVPKLTREIGGRASKTPLD 336
>gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str.
91001]
gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP
32953]
gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua]
gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516]
gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F]
gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92]
gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001]
gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua]
gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F]
gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia
pseudotuberculosis IP 31758]
gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 342
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 63 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E
Sbjct: 179 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
+++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 239 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 336
>gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
Length = 346
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+ + +T A+ I P + +DP+ RQ +P EL DP+ + + +P G++H+Y
Sbjct: 49 FPLRVTQSYASRIKPGDVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYH 108
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R+LL C + CR+CFRR + S + + AL YI + I EVI +GGDP
Sbjct: 109 GRVLLISASQCAINCRYCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDP 166
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L +S +++Q ++ + I HV LR H+R+P+V P RI EL+ L + I +H N
Sbjct: 167 LAVSDRQMQWLVNQIAVIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHIN 226
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E E + L A I LL+QSVLLKG+ND L +L + I PYYLH
Sbjct: 227 HAAEIDEHVHNRLKILKKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLL 286
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--DTHNIKKVGN 332
D G +HF + + L + G P + ++P K + HN+ N
Sbjct: 287 DKVTGAAHFDVDEASAIALHNHLLATLPGYLVPKLVREVPNAASKTAVYGAEHNLGYTNN 346
>gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis
Angola]
gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Angola]
gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D106004]
gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
Length = 334
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
+++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328
>gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 340
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 146/274 (53%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P +E + DP+ + + + G++H+Y +R+LL + C V CR
Sbjct: 67 NPYDPLLRQILPLAQEFEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + +L YI +I EVI +GGDPL+ LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A + LL+Q VLLKG+ND L +L T + I+PYYLH D G +HF + E
Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEI 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++A L K+SG P ++ G K +D
Sbjct: 303 ARQLMAGLITKVSGYLVPKLTREIGGRASKTPLD 336
>gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D182038]
Length = 334
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
+++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328
>gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2]
Length = 341
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 3/283 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A+L+ NPNDP+ Q +P K+E +I P +DP+ +++ + KG++H+Y R+LL +
Sbjct: 59 FASLMEKGNPNDPLFLQVMPLKQEFSIEPGYTKDPLEEHDTAG-KGLLHKYDSRVLLMVR 117
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C V CR+CFRR + ++ + AL YI I EVIF+GGDPL+ L
Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VNKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHL 175
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ K + I H++ LR H+R+P+V P+R++ + + +HANH E S
Sbjct: 176 AALAKEIAAIPHIKRLRIHTRLPVVLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPA 235
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ + +L G+ LL+QSVLLK +ND + + L + + PYYLH D G SH
Sbjct: 236 LKSRLEKLRTHGVTLLNQSVLLKDVNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASH 295
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
F ++ ++ ++I+ +++ G P + ++ GK ID H
Sbjct: 296 FYVSDDKARQIMQEAIKRLPGFLVPKLVREIGAQPGKTPIDLH 338
>gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
Length = 335
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 151/278 (54%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +P DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGDPFDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L I H++ LR H+R+P+V P RI L Q L ++ V + H NH E +
Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L AG+ LL+QSVLL+G+N+D E+L L + I PYY+H D G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E ++++ L ++SG P ++ G K +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328
>gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 334
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 145/265 (54%), Gaps = 5/265 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ RQ +P +E + DP+GD+ + G++ +Y RIL C ++CR
Sbjct: 67 DPNDPLLRQVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCR 126
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFR+ S+ + + L I+ + I EVI +GGDPL+L L ++ K+L
Sbjct: 127 YCFRQHYPTSK-----TKLYYQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLA 181
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I VQ LR H+R+PIV P R+N EL+ L E + + +HANH E E +A+ +L
Sbjct: 182 DIPQVQRLRLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKL 241
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AGI +L+QSVLL+GIND+ L L + R+ PYYLH D G +HF + +
Sbjct: 242 VTAGITVLNQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTA 301
Query: 291 QKIVASLKEKISGLCQPFYILDLPG 315
+++ ++ + G P + ++ G
Sbjct: 302 LELLEKMRVALPGYLVPKLVREVTG 326
>gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 427
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 21/303 (6%)
Query: 36 SIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91
++ +TP + NLI+ N DPI +QFIP EL LP + D + + SP+ G+VH
Sbjct: 56 ALRITPYLLNLIDWSNFLEDPIRKQFIPVGSEL--LPSHPLLKMDSLHERKSSPVDGLVH 113
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145
RY D++LL CPVYCRFC R VG +VL K + + LAY++ I
Sbjct: 114 RYKDKVLLLATDRCPVYCRFCTRSYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIA 173
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCL 200
+V+ +GGD L RL + L I ++ +RF ++ V P +I + + +
Sbjct: 174 DVVVSGGDCFRLKPSRLLAIGMGLLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNI 233
Query: 201 KEAGKPVYIAI----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+AG+ + I H NHP E ++ IAA L GI + +QSVL+ G+NDDPE++
Sbjct: 234 SDAGRDQGVEISFHTHFNHPREITDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQ 293
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L++ +L I+PYY++ DL G H R ++ +I +++ +G P +++D PGG
Sbjct: 294 LVKKLSDLHIQPYYVYTCDLVDGIEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGG 353
Query: 317 YGK 319
GK
Sbjct: 354 GGK 356
>gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira
halophila SL1]
gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1]
Length = 342
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 6/276 (2%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I P +PNDP+ RQ +P EL P DP+ + G++ +Y R LL C
Sbjct: 68 IRPGDPNDPLLRQVLPIGAELETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCA 127
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
++CR+CFRR +++ AL +++ EVI +GGDPL+L + L L
Sbjct: 128 IHCRYCFRRCFPYNREA------GWRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACL 181
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L I V+ +R H+R+P+V P R+ L + L + I +HANHP E E +A
Sbjct: 182 ERLGRIAAVRRVRIHTRLPVVIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSA 241
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++RL N +L+Q+VLL+G+NDD LA+L + PYYLH D AG +HF +
Sbjct: 242 LARLRNVCSTVLNQTVLLRGVNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVD 301
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ GQ++ A L + G P + PG K I
Sbjct: 302 AKTGQRLWAELARSLPGYLVPRLAREEPGAAAKTVI 337
>gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 372
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 170/313 (54%), Gaps = 12/313 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K+L + + + E+ ++++E+ + + + A LI+ +PNDPI P +
Sbjct: 7 KSLEEVEQAFGVKIPDSER-EKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL++ D G+ ++ L G+ H+Y + LL + + C YCR CFR+ +VG
Sbjct: 66 ELDV--SGSYDTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L D A+ YI+E +I V+ +GGDPL+L ++ L L I H++ +RF SRVP
Sbjct: 124 LKLFD--RAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181
Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ P RI + +L++ + P VY+ H NHP E ++EA A+ L AG+ + +Q
Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKE 299
+VLLKG+ND PE+LA LM+ + PYY+ ++ +HF++ ++EG IV K
Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301
Query: 300 KISGLCQPF-YIL 311
+ G + F YI+
Sbjct: 302 MLDGHAKRFKYIM 314
>gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
Length = 335
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C V CR
Sbjct: 59 DPSDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +L L
Sbjct: 118 YCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDEL 174
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI L Q L + V + H NH E + ++++
Sbjct: 175 ENIAHIKRLRIHTRLPVVIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQ 234
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+GINDD E+LA L + I PYY+H D G +HF + +E
Sbjct: 235 LKRAGVTLLNQSVLLRGINDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDE 294
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ L ++SG P ++ G K +D
Sbjct: 295 ARLLMKGLLCRVSGYLVPRLAREIGGELSKTPLD 328
>gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 342
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L +
Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF AA L
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 AGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P + ++PG GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339
>gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
Length = 241
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 133/239 (55%), Gaps = 2/239 (0%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P G++ +Y R LL + C + CR+CFRR + LS +D A+ + E +++
Sbjct: 2 PATGLIRKYDSRALLMVTGQCAINCRYCFRRHF--PYEDHRLSPEDRTQAIKTLSEDTRL 59
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
EVIF+GGDPL+ + + L + L I H++ LR H+R+P+V PQR+ LI+ L +
Sbjct: 60 NEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGSR 119
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ IH NHP E + A+ RL AGI LL+QSV+LKG+ND+ +LA L E
Sbjct: 120 LQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFEC 179
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ PYYLH D AG HF ++ + + +V L + G P + ++PG GK +D
Sbjct: 180 GVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238
>gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 345
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 11/277 (3%)
Query: 51 NPNDPIARQF--IPQKEELNILPEE--REDPIGDNN-HSPLKGIVHRYPDRILLKLLHVC 105
N DP+ RQ +PQ+ LP E +DP+G+ + ++ G++ +Y R LL C
Sbjct: 67 NAWDPLLRQVLAVPQEN----LPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQC 122
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR SSK+ AA+ + I EVI +GGDPL+L L +
Sbjct: 123 AVNCRYCFRRSYPYGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAI 180
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+ LR LR H+R+PIV P R+ LI L + V + +H+NHP E +
Sbjct: 181 ARRLRGNTRGITLRIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTAR 240
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ RL + G+ +L+QSVLLKGINDD ++LA L PYYLH D AG++HF +
Sbjct: 241 ALERLRDGGVTVLNQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEV 300
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ ++I+ L K G P +++PG K +I
Sbjct: 301 SELRARQILGQLASKRPGYLVPKLAVEVPGADSKREI 337
>gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227]
gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112]
gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83]
gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74]
Length = 349
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302
Query: 290 GQKIVASLKEKISGLCQP 307
++I+ L +SG P
Sbjct: 303 ARQIMRELLTLVSGYLVP 320
>gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99]
gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 342
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 152/289 (52%), Gaps = 3/289 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y
Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L ++ L +I H++ LR HSR+P+V P+RI L Q L ++ + H N
Sbjct: 168 LMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E +E + L AG+ LL+QSVLL+ INDD LA L + I PYYLH
Sbjct: 228 HAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPYYLHVL 287
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLD 336
>gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
Length = 334
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ Q + +EE +P +DP+ D S + G++H+Y +R LL + C V CR
Sbjct: 59 DAKDPLLLQVLTAREEFIAVPGFTDDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + + + AL YI + ++ E+IF+GGDPL+ L ++ L
Sbjct: 118 YCFRRHFPYQDNQG---NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQL 174
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI L Q L ++ V + H NHP E + +++R
Sbjct: 175 ENIAHIKRLRIHTRLPVVIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMAR 234
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+ +N+DP++LA L I PYY+H D G +HF + +E
Sbjct: 235 LKQAGVTLLNQSVLLRDVNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDE 294
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ ++ L ++SG P ++ G K +D
Sbjct: 295 ARLLIKGLLSRVSGYLVPRLAREIGGEPSKTPLD 328
>gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
Length = 342
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ Q + E + P DP+ D + + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L+++ + +H NH E + A +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L NA + LL+Q VLL+G+ND+ + LA+L R + I PYYLH D G +HF + E
Sbjct: 243 LKNAHVTLLNQGVLLRGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ SL +SG P ++ G K +D
Sbjct: 303 AREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLD 336
>gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
Length = 337
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ Q + + E + +DP+ + H+ + I+H+Y +R+LL + + C V CR
Sbjct: 67 NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + +L YI ++I EVIF+GGDPL+ L ++K L
Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ LR H+R+P+V PQRI EL + L E+ I H NHP E E A+ +
Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +A + LL+QSV+LK IND+ IL L + I PYYLH D G SHF L E
Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302
Query: 290 GQKIVASLKEKISGLCQP 307
I L+ SG P
Sbjct: 303 AAAIYKELQRISSGYLVP 320
>gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
Length = 386
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 160/292 (54%), Gaps = 13/292 (4%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77
+ E+ ++K+I+ + + LI+ +P DPI + IP + EL EE R D
Sbjct: 16 LSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGEL----EEYGRWDA 71
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
++ + + G H+Y + LL + VC YCR+CFR+ + + +S D + + Y
Sbjct: 72 SDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQPGIDY 129
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195
I+E +I V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI + E
Sbjct: 130 IKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIYEDQE 189
Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L+ + E + +Y+ H NHP E + EA L NAG I+++Q+ +L+GINDDP
Sbjct: 190 LLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGINDDPV 249
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+L L+ + PYY AG + F L+++E IV K + SGL
Sbjct: 250 VLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGL 301
>gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15]
Length = 346
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
N + NP DP+ RQ +P +E P DP+ ++ G++ +Y R LL +
Sbjct: 67 NRMEKGNPADPLLRQVLPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQ 126
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C + CR+CFRR ++ LS D + + + +I EVIF+GGDPL ++ + L +
Sbjct: 127 CAINCRYCFRRHFPYDEQR--LSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQ 184
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ I H++ LR H+R+P+V PQR+ EL++ L V I +H NHP E
Sbjct: 185 WASAISGIPHIRRLRLHTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTR 244
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ L AG LL+QSV+L+G+ND +L L T + + PYYLH D G HF
Sbjct: 245 RALGYLRAAGATLLNQSVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFD 304
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++ +E + +V L ++ G P + + PG K I+
Sbjct: 305 VSDDEARNLVRELLARLPGFLVPKLVREEPGKESKTPIN 343
>gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2]
gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2]
Length = 323
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 144/274 (52%), Gaps = 5/274 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
AN I +PNDP+ +Q +P E + P DP+GD +P ++H+Y R LL
Sbjct: 35 FANQIEKGSPNDPLLKQILPGLAEQELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIAS 94
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C ++CR+CFRR Q + +AAL I + I EVI +GGDP+ LS L
Sbjct: 95 PRCDIHCRYCFRRHFPYEQA----KKQHWQAALENIAQDHSITEVILSGGDPMTLSENTL 150
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSE 221
+++ + I HV LR HSR PIV PQ+ + P L++ L ++ + +H NH E +
Sbjct: 151 IELVHEIEAIPHVSTLRMHSRTPIVAPQKAHRPTLLKALSKSRLQTVLVVHCNHANELTP 210
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
E+ + + + + LL+Q+VLLKGIND + L+ L + I PYY H D +G+
Sbjct: 211 ESADLMQQFRQSNVFLLNQTVLLKGINDSADTLSALSKKLFSQGILPYYCHLLDKVSGSG 270
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
HF + + I L++ + G P ++ ++ G
Sbjct: 271 HFDVQKHQAWAIFDQLRQALPGYLVPRFVEEIAG 304
>gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont]
Length = 342
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
N DP+ Q + ++E P DP+ D S + G++H+Y +R +L + C V CR
Sbjct: 67 NAQDPLLLQVLTSRQEFTDAPGYSTDPL-DEQSSVVPGLLHKYKNRAMLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ +AA+ YI ++ E+IF+GGDPL+ + L ++ L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIAAHPELDEIIFSGGDPLMAKDQELAWLIGAL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P RI L Q L + V + H NH E E + R
Sbjct: 183 ENIPHLKRLRIHSRLPVVIPARITEGLCQLLADTRLQVLLVSHINHAQEIDEALRERMQR 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF + E+
Sbjct: 243 LKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALFDAGILPYYLHVLDKVQGAAHFFVPDEQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ +V L +SG P ++ G K +D
Sbjct: 303 ARALVRQLLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 342
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 5/290 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A+ + +P DP+ Q I +E P DP+ D S + G++H+Y
Sbjct: 51 FALRVPRAFASRMQKGDPQDPLLLQVITASQEFVDAPGYSTDPL-DEQSSVVPGLLHKYR 109
Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+R LL + C V CR+CFRR +G + ++ + AL YI+E+ ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKRNWQQALEYIREQPELDEIIFSGGD 166
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ L ++ L I H++ LR HSR+P+V P RI L Q L ++ V + H
Sbjct: 167 PLMAKDSELDWLIGELEQIPHLKRLRIHSRLPVVIPSRITRTLCQRLAQSRLQVLMVTHI 226
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NH E + A+ L +AG+ LL+QSVLL+ INDD LA L + + PYYLH
Sbjct: 227 NHAQEIDDALRDALQLLKSAGVTLLNQSVLLRNINDDATTLATLSNALFDAGVLPYYLHV 286
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ ++ + I+ L +SG P ++ G K +D
Sbjct: 287 LDKVQGAAHFYVSDDDARAIMRELLANVSGYMVPKLAREIGGEPSKTPLD 336
>gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
Length = 337
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ Q + + E + +DP+ + H+ + I+H+Y +R+LL + + C V CR
Sbjct: 67 NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + +L YI ++I EVIF+GGDPL+ L ++K L
Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ LR H+R+P+V PQRI EL + L E+ I H NHP E E A+ +
Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +A + LL+QSV+LK IND+ IL L + I PYYLH D G SHF L E
Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302
Query: 290 GQKIVASLKEKISGLCQP 307
I L+ SG P
Sbjct: 303 AAAIYKELQRISSGYLVP 320
>gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
Length = 342
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 150/278 (53%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P +P DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 63 MQPGDPQDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYSNRALLLVKGGCA 121
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI+ + ++ E+IF+GGDPL+ L +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWL 178
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
+ L I H++ LR H+R+P+V P RI Q L+++ V + H NH E + A
Sbjct: 179 IGELEGIAHIKRLRIHTRLPVVIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRA 238
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
++++L G+ LL+QSVLL+G+ND ++LA L + I PYY+H D G +HF +
Sbjct: 239 SMAKLKRHGVTLLNQSVLLRGVNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+E + I+ L K+SG P ++ G K +D
Sbjct: 299 NDDEARVIMKGLMSKVSGYMVPKLTREIGGEPSKTILD 336
>gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980]
gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 531
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 172/321 (53%), Gaps = 20/321 (6%)
Query: 19 LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74
+ +++ I+++KE SI L P I ++I+ NP +DPI RQFIP K +L P+
Sbjct: 161 ITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPKVE 220
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------ 128
D + +++ SP++G VHRY D+ L CP+YCRFC R +G V +
Sbjct: 221 LDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKPQR 280
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
K E YI++ Q+ +++ +GGD IL+ + ++ + + L I H++ RF ++ V
Sbjct: 281 KRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLAVS 340
Query: 189 PQRI-------NPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
P RI E+I+ K+AGK + I H NHP E + + A+ RL + +
Sbjct: 341 PARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVTVR 400
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+NDD ++NL++T + I PYY++ D+ R + ++ ++
Sbjct: 401 NQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERHIR 460
Query: 299 EKISGLCQPFYILDLPGGYGK 319
I G P +++DLPGG GK
Sbjct: 461 GSIGGFVTPNFVVDLPGGGGK 481
>gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
Length = 340
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
N +DP+ Q +P E+ + +DP+ + +H+P K IVH+Y R+L+ C V CR
Sbjct: 63 NVHDPLLLQVLPSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + L+ + ++ + Y+++ +I EVI +GGDPL++ L ++ L
Sbjct: 123 YCFRRHFPYADNQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLE 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ ++ LR HSR+P+V P R+ ++++ +K + + + H NH E EE A +L
Sbjct: 181 ALPQIKRLRIHSRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+AG+ LL+Q VLLKG+ND E NL I PYY+ D G +HF + IE+
Sbjct: 241 KSAGVTLLNQGVLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDA 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
Q+++ + ++ G P ++PG K
Sbjct: 301 QELMGKVAAELPGYLVPRLAKEIPGKPAK 329
>gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148]
gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148]
Length = 346
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-GIVHRYPDRILLKLLHVCPVYC 109
+P+DP+ RQ + EL +P +DP+G+ S G++ +Y R LL L C + C
Sbjct: 64 DPDDPLLRQVLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINC 123
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R+CFRR ++ S ++ A+ +I + I EVI +GGDPL++S ++L+ ++ L
Sbjct: 124 RYCFRRHFPYNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQL 181
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+Q LR HSR+PIV P R+ L+ L + +H+NH E + E A+ +
Sbjct: 182 AAIPHLQRLRVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQK 241
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L++ I LL+Q+VLL GIND + LA+L + PYYLH D G +HF +T
Sbjct: 242 LSSGKITLLNQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARR 301
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G +++ L+ ++ G P + + G KV++
Sbjct: 302 GLELITQLENRLPGYLVPRLVREDAGELAKVRV 334
>gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40]
Length = 453
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 158/302 (52%), Gaps = 18/302 (5%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY
Sbjct: 107 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 166
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147
PD++L VCPVYCRFC R VG Q TV K E YI ++ +V
Sbjct: 167 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 226
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL---- 200
+ +GGD L +L+++ TL I H++ +RF S+ V P RI + E + L
Sbjct: 227 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEIS 286
Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+E GK + + H NHP E S A +L + + + +Q+VLL +N++ + L
Sbjct: 287 NRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRL 346
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+R + I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG
Sbjct: 347 IRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGG 406
Query: 318 GK 319
GK
Sbjct: 407 GK 408
>gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 340
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P ++E + DP+ + ++ + G++H+Y +R+L+ + C + CR
Sbjct: 67 NPYDPLLRQVLPLEQEFEVHAGYSTDPLEEQDND-IPGLLHKYKNRVLMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YI ++ EVI +GGDPL+ L ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR HSR+P+V P R+ P+L Q + V + H NH E + E A+
Sbjct: 183 EQIPHIKRLRIHSRLPVVLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQN 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +A + LL+Q VLLKG+ND + L NL + I PYYLH D G +HF + +
Sbjct: 243 LKHANVTLLNQGVLLKGVNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ ++A L E +SG P ++ G K +D H
Sbjct: 303 AKTLMAGLMENVSGYLVPQLTREIGGRSSKTPLDLH 338
>gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
Length = 348
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 140/272 (51%), Gaps = 3/272 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ RQ +P E P DP+ + P+ G++H+Y R+LL L C V CR
Sbjct: 67 DSNDPLLRQVLPLHNEFESEPGYSTDPLQEQ-QGPVNGLLHKYKSRVLLILQGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + S + L YI++ +I EVI +GGDPL+ +RL+ ++
Sbjct: 126 YCFRRHFPYDE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ + LR HSR+P+V P R+ +L + L + + +HANH E S E A+
Sbjct: 184 LLPQLTRLRIHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDW 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+AGI LL+QSVLL G+ND+ L L R+ PYYLH D G SHF ++ E+
Sbjct: 244 HHAGIHLLNQSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
Q + + ++ G P + + G K I
Sbjct: 304 QALWQKMTHELPGFLVPRLVREEAGELSKTAI 335
>gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
Length = 340
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 147/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE + DP+ + N++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPYDPLLRQVLPLSEEFEVHQGYSNDPLEEQNNA-IPGLLHKYRNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L YIQ+ +I E+I +GGDPL+ L ++ +
Sbjct: 126 YCFRRHFPYDENKG---SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I+H++ LR HSR+P+V P RI +L L + V + H NH E + A+ +
Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q V+LKG+ND L E + PYY+H D G +HF ++ ++
Sbjct: 243 LKQVGVTLLNQGVMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A + E+ SG P ++ G K +D H
Sbjct: 303 AKEIMAGVLEQTSGYLVPKLTREIGGRASKTPLDLH 338
>gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 386
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 159/292 (54%), Gaps = 9/292 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I E+ + E+++ ++ +LI+ +P DPI R +P EEL P DP
Sbjct: 29 IDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE--PWGHLDPSS 86
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ ++ G+ H+Y + LL + +C CR+CFR+ + + V +KD A LAYI+
Sbjct: 87 EHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKDISAGLAYIR 144
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+ +I V+ TGGDPL L R+ +++ +R I+HV I+R +++P +P RI +P L+
Sbjct: 145 DHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPFRIINDPALL 204
Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+++ K +YI NHP E ++ A A++ L AG ++++Q+ L++GINDDPE+L
Sbjct: 205 DMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIRGINDDPEVL 264
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
A L + PYY+ A G F + +EE +I + SGL +
Sbjct: 265 AALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLAK 316
>gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 342
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEESA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF A+ L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRD 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ L ++SG P + ++PG GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339
>gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 393
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 165/308 (53%), Gaps = 9/308 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS +L + ++ +++ ++ + + + +LI+P++ +DPI + +P EEL
Sbjct: 29 ITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRKLAVPAAEEL 88
Query: 68 NI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+ + E +DP GD+ H GI+H+Y L+ C +YCR CFR+ MVG
Sbjct: 89 VVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRKRMVGLPNHQ 148
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ ++ A YI +I V+ +GGDPL+L ++K+L L I H+ +R SR
Sbjct: 149 TV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHLNFVRIGSRA 206
Query: 185 PIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P+V P R + ELI L++ G K + + H NHP E + EA AI R+ AG+ + +Q+
Sbjct: 207 PVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVREAGVTVNNQA 266
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEK 300
V L G+NDD E L LM + + + PYYL+ +A HF++ ++ G IV + +
Sbjct: 267 VFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGVDIVDEARRR 326
Query: 301 ISGLCQPF 308
+ G + F
Sbjct: 327 MDGYAKRF 334
>gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238]
gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 340
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 148/277 (53%), Gaps = 7/277 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
NP DP+ RQ +P +E + DP+ + +N P G++H+Y +R+LL L C V C
Sbjct: 67 NPFDPLLRQVLPLDQEFEVHDGYSTDPLDEQDNEQP--GLLHKYKNRVLLILKGGCAVNC 124
Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR KG + ++ YI ++ EVI +GGDPL+ L+ +++
Sbjct: 125 RYCFRRHFPYEDNKG---GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQH 181
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L + H++ LR HSR+P+V P RI L + E V + H NH E S ++
Sbjct: 182 LDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMT 241
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L A + LL+QSVLLKGIND + L NL + I PYYLH D G +HF ++ E
Sbjct: 242 QLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDE 301
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ ++++A L E +SG P ++ G K +D +
Sbjct: 302 KAKELMAELIENVSGYLVPTLAREIGGRKSKTPLDLY 338
>gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
Length = 340
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD----NNHSP 85
E +S + L+ NP DP+ RQ +P +E + P DP+ + H+
Sbjct: 42 EAKKLFSFRVPRPFVELMEAGNPQDPLLRQVLPLADEFTVTPGYSTDPLNEVTDKREHAV 101
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+G++H+Y R+LL + C + CR+CFRR + VL K + + Y+++ ++
Sbjct: 102 PQGLLHKYASRVLLLVQGACAINCRYCFRRHYPYADD--VLPRKQFDECVEYVRQNQEVN 159
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
EVI +GGDPL + L ++ L +K ++ LR HSR+P+V PQR+ L L + +
Sbjct: 160 EVILSGGDPLFANDGYLIELADKLAELKQIKRLRIHSRLPVVLPQRLTERLATHLTQRFE 219
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
V + IHANH E ++ G+ LL+QSVLLK INDD + L+ L +
Sbjct: 220 QVILVIHANHANEIGSSLKQHLATWRQRGVTLLNQSVLLKAINDDADSLSQLSERLFDAS 279
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ PYYLH D G +HF ++ +++ + ++ G P + ++P K I
Sbjct: 280 VLPYYLHQLDPVQGAAHFAISDARARELWQQINARLPGFLVPKLVREIPNRDSKTPI 336
>gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
FV-1]
Length = 315
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C
Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113
Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
+++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290
Query: 286 TIEEGQKIVASLKEKISGLCQP 307
+E +++ L ++SG P
Sbjct: 291 DDDEAGQLMKGLLSRVSGYLVP 312
>gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 368
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ +E+ ++ E+ ++ +LI+ ++P DPI + IP EL R D G
Sbjct: 16 LSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEEWG--RLDASG 73
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + G+ H+Y L+ + +C +CR+CFR+ + G ++D + L YI
Sbjct: 74 EARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIF-MNGGAREVARDIDVDLEYIS 132
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----P 194
+I V+ +GGDPL LS RL+K++ +R I HVQI+R ++VP +P RI P
Sbjct: 133 SHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRILNDTKLP 192
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
E+I+ K +YI NHP E +E+AI A++ L +G + +Q+ LL GIND+PE +
Sbjct: 193 EIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGINDNPETM 252
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
A L R + I PYY+ G F + +E+G I+ K SGL + F
Sbjct: 253 AELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAKRF 306
>gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 315
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 17/282 (6%)
Query: 43 IANLINPHNPNDPIARQFIPQK-----EELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
A LI+ N NDP+ RQ I K E ++LP E E +SP+ G++H+YP+R+
Sbjct: 42 FAQLIDKSNKNDPLLRQVISSKVLSKSENFSLLPLEEE------KYSPVAGLIHKYPNRV 95
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL VC ++C++CFR+ S+ + + + + YI +I EVI +GGD L L
Sbjct: 96 LLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQN---YIVNDVKINEVILSGGDLLSL 152
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
S +L ++ + I H++ LR H+R +V P RI +L L ++ V I +H NH
Sbjct: 153 SDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQSRLNVVIVLHTNHAQ 212
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E S + I++L +G+ LL+QSVLLKG+ND +IL L +L I PYYLH D
Sbjct: 213 ELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFDLGILPYYLHMLDKV 270
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
G F + ++ ++ LK +SG P + D G + K
Sbjct: 271 QGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRD-NGNHSK 311
>gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
Length = 345
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 150/283 (53%), Gaps = 3/283 (1%)
Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLK 100
A I N DP+ RQ + ++E I+ +DP+ + + ++ G++ +Y R LL
Sbjct: 58 AFAARIERGNVADPLLRQILAAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLV 117
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+CFRR+ + SS + A + + + I E+I +GGDPL+L +
Sbjct: 118 VTGQCAINCRYCFRRDYPYADNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDE 175
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
++ + + + + LR H+R+P+V P+R+ LIQ L E G P + +H+NHP E
Sbjct: 176 QIAAMARRIARHQRSVTLRIHTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEID 235
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
AI L AG +L+QSVLL G+ND PE+LA+L PYY+H D AG
Sbjct: 236 APTAHAIKSLREAGTTVLNQSVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGA 295
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+HF ++ + ++I+ L G P +++ PG K +++
Sbjct: 296 AHFEVSEDSARRIMGELSGMRPGYLVPRLVIERPGAGSKQQLE 338
>gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
Length = 342
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA+ L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P + ++PG GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339
>gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 342
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA+ L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P + ++PG GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339
>gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 342
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ P D +GD G++ +Y R LL C +CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L +
Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA L
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ A L ++SG P + ++PG GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339
>gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
Length = 340
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 3/257 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + +E +DP+ + P I+H+Y +R+L + + C V CR
Sbjct: 70 NPQDPLLLQVMLSHQEFLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCR 128
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR +Q + + A+ YI E QI EVIF+GGDPL+ L ++K L
Sbjct: 129 YCFRRHFPYNQSQG--NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLE 186
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H+Q LR HSR+P++ PQRI L + L+ + + H NHP E + A+ RL
Sbjct: 187 TIPHLQRLRIHSRLPVMIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRL 246
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + LL+QSVLLK +ND+ +L L E+ I PYYLH D G +HF ++ E
Sbjct: 247 KQARVELLNQSVLLKNVNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESA 306
Query: 291 QKIVASLKEKISGLCQP 307
KI L+ SG P
Sbjct: 307 VKIYRDLQATTSGYLVP 323
>gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
Length = 340
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE ++ DP+ D + + G++H+Y +R L+ + C + CR
Sbjct: 67 NPFDPLLRQVLPLSEEFDVHSGYSTDPL-DEQDNQVPGLLHKYRNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + +L Y+++ ++ E+I +GGDPL+ + LQ ++ +
Sbjct: 126 YCFRRHFPYNENKG---NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I+H++ LR HSR+P+V P RI + L V + H NH E ++E A+S
Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSS 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q V+LKG+ND E L + + + PYY+H D G +HF ++ ++
Sbjct: 243 LRREGVTLLNQGVMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+A + E++SG P ++ G K +D H
Sbjct: 303 AKQIMAGVIERVSGYLVPKLTREIGGRASKTPLDLH 338
>gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
Length = 340
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P + E + DP+ + +++ + G++H+Y +R L+ + C V CR
Sbjct: 67 NPYDPLLRQILPLEPEFEVHDGYSLDPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + AL YI E ++ EVI +GGDPL+ L ++ +
Sbjct: 126 YCFRRHFPYNDNKG---GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI EL + + + H NH E ++E A+++
Sbjct: 183 ESISHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L LL+Q VLL+GIND + L +L I+PYYLH D G +HF + E
Sbjct: 243 LKRVNATLLNQGVLLRGINDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++++A L + +SG P ++ G K +D H
Sbjct: 303 ARQLMAGLMQNVSGYMVPKLTREIGGRASKTPLDLH 338
>gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
Length = 593
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 9/292 (3%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY
Sbjct: 216 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 275
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147
PD++L VCPVYCRFC R VG Q TV K E YI ++ +V
Sbjct: 276 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 335
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ +GGD L +L+++ TL I H++ +RF S+ V P RI + ++ GK +
Sbjct: 336 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNI 394
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ H NHP E S A +L + + + +Q+VLL +N++ + L+R + I+
Sbjct: 395 ALHTHFNHPQEISWITEHAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQ 454
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
PYY++ D+ G R + + I + ++ I+G P +++DLPGG GK
Sbjct: 455 PYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGK 506
>gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
Length = 340
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR
Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL Q L+ + + + H NH E + E A +++L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q+VLLK +N+ E L + I PYYLH D G +H+ ++ EE
Sbjct: 244 KQAGVTLLNQAVLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ + ++SG P ++ G K +D H
Sbjct: 304 KAIMRGVITQVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9]
gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 357
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P + E + DP+ + +++ + G++H+Y +R L+ + C V CR
Sbjct: 84 NPYDPLLRQVLPLEPEFEVHDGYSLDPLKEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 142
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + AL YI E ++ EVI +GGDPL+ L ++ +
Sbjct: 143 YCFRRHFPYSDNKG---GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 199
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H++ LR H+R+P+V P RI EL + + + H NH E ++E A+++
Sbjct: 200 ESIPHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 259
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + LL+Q VLL+GIND E L L + I+PYYLH D G +HF + E
Sbjct: 260 LKRVNVTLLNQGVLLRGINDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTE 319
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ ++A L + +SG P ++ G K +D H
Sbjct: 320 ARHLMAGLMQNVSGYMVPKLTREIGGRTSKTPLDLH 355
>gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 339
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ RQ + EE + +DPI + ++ ++H+Y +R +L + C + CR
Sbjct: 67 DPTDPLLRQVLTLPEEFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCR 126
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + + A+ YI++ S++ E+I +GGDPL+ L K+L L
Sbjct: 127 YCFRRYFPYQDNQS--NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLE 184
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H+ LR HSR+ IV P RI + Q L + V + H NH E +I++L
Sbjct: 185 DIPHLTKLRIHSRLLIVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKL 244
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
N + LL+QSVLL+GIND+ +ILA L T + I PYYLH D G +HF + +
Sbjct: 245 RNKQVTLLNQSVLLRGINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRA 304
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+KI+ L K++G P + D+ G K
Sbjct: 305 RKIMHDLLSKVAGYLVPRLVRDISGMPSKT 334
>gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
Length = 340
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q +P EL P DP+G+ + G++H+Y R LL L C V+CR
Sbjct: 63 NPLDPLLLQVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCR 122
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + ++D Y++ + I EVI +GGDPL LS+++L+ ++ L
Sbjct: 123 YCFRRHF--PYQENLPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLE 180
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ H++ LR HSRVPIV P R++ EL+ LK + + + +H+NH E + +++L
Sbjct: 181 SVPHLKFLRIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQL 240
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
I +L+Q+VLL G+ND ++L +L + + PYYLH D G HF L +
Sbjct: 241 VQQQITVLNQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHI 300
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+I + + G P + ++ G K +
Sbjct: 301 NEIYTEVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
Length = 378
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 184/343 (53%), Gaps = 16/343 (4%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ +T+A+ L ++E +++++ IS + ++ P +LI+P +P+DPI + +P
Sbjct: 3 NENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVPAL 62
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL+ P R D G+ +++ L G+ H+Y L+ + C +YCR CFR+ +VG +
Sbjct: 63 DELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEGRE 120
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+D LAYI++ +I V+ +GGD L+ L + L+ L ++H+ ++R SR
Sbjct: 121 TRPRRDK--VLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICSRT 178
Query: 185 PIVDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
P+V P RI + +L+ KE G K + + NHP E S +A A+ L G+++ +Q
Sbjct: 179 PVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVRNQ 238
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKE 299
+VLL G+ND L L++ V + PYY+ G ++F++ I + IV K+
Sbjct: 239 TVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEAKQ 298
Query: 300 KISGLCQPF-YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+GL + F Y+L GK++I + VGNG + H
Sbjct: 299 MQNGLGKAFRYVLSHE--TGKIEI----LGPVGNGRWLFKYHQ 335
>gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 337
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + ++E + +DP+ + + + + ++H+Y +R+LL + C V CR
Sbjct: 67 NPQDPLFLQVMSFRDEFLQVEGFSKDPLEEQD-AVVPSVLHKYHNRLLLMVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + AL YI +I EVIF+GGDPL+ L ++K L
Sbjct: 126 YCFRRHFPYADNKG---NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+Q LR H+R+P+V PQRI + Q L E+ + H NHP E AI++
Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G++LL+Q+VLLKGIND+ IL L I PYYLH D G SHF L
Sbjct: 243 LREVGVLLLNQAVLLKGINDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSR 302
Query: 290 GQKIVASLKEKISGLCQP 307
I L+ SG P
Sbjct: 303 ALNIYKELQSLTSGYLVP 320
>gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
Length = 340
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P EE + DP+ + +++ + G++H+Y +R L+ + C V CR
Sbjct: 67 NPHDPLLRQVLPLSEEFEVHEGYSADPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L Y+ + S+I EVI +GGDPL+ ++ ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ +R HSR+P+V P RI EL Q L + V + H NH E + E A+ +
Sbjct: 183 EQIPHVETVRIHSRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE
Sbjct: 243 LKFSGATLLNQGVMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ L ++SG P ++ G K +D H
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338
>gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 330
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + + A + NPNDP+ Q + + E DP+ + SP I+H+Y
Sbjct: 45 FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103
Query: 95 DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R+L L + C + CR+CFRR E V S K + L YI E ++ EVI +
Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + L +L L I H++ LR HSR+P+V P RI EL + L ++ V +
Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NH E +++L AG++LL+QSV+LKG+ND+ + L L E I PYY
Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
LH D AG SHF + E+ +I L+ SG P
Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314
>gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 313
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 46 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 105
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 106 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 163
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L+ L+ P +HANH EF A+ L +
Sbjct: 164 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 223
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 224 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 283
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ L ++SG P + ++PG GK
Sbjct: 284 LHTELATRLSGYLVPRLVREIPGDTGK 310
>gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
Length = 330
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + + A + NPNDP+ Q + + E DP+ + SP I+H+Y
Sbjct: 45 FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103
Query: 95 DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R+L L + C + CR+CFRR E V S K + L YI E ++ EVI +
Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + L +L L I H++ LR HSR+P+V P RI EL + L ++ V +
Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NH E +++L AG++LL+QSV+LKG+ND+ + L L E I PYY
Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
LH D AG SHF + E+ +I L+ SG P
Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314
>gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 389
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 168/315 (53%), Gaps = 10/315 (3%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + + +++ E+K I++ + + NLI+ ++P DPI + IP EL
Sbjct: 9 DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELK--EY 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
R D + + + G H+Y LL + VC YCR+CFR+ + + ++ D
Sbjct: 67 GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLFRNDVKEAMA--DVT 124
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ YI + +I ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R S++P+ +P RI
Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184
Query: 193 --NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+PEL+ ++E + +Y+ H NHP E + EA L +AG I+++Q+ +LKGI
Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD +L L+ + PYY AG + F + ++ ++V K + SGL +
Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304
Query: 308 FYILDLPGGYGKVKI 322
L + GK++I
Sbjct: 305 VR-LSMSHSSGKIEI 318
>gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541]
gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541]
Length = 342
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ Q + K E +I P DP+ + ++ + ++H+Y +R L+ + C V CR
Sbjct: 67 DPSDPLLLQVLTAKTEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALMLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + A+ YI+ S++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ LR HSR+P+V P+RI L + L+++ V + H NH E + A+ +
Sbjct: 183 EDIPHITRLRIHSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+ +ND+ LANL E I PYYLH D G +HF ++ E
Sbjct: 243 LKRAGVTLLNQSVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++ L K+SG P ++ G K +D
Sbjct: 303 ARELIRELLSKVSGYLVPKLAREIGGEPSKTLLD 336
>gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
Length = 343
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 5/300 (1%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
+ E E + + + A + +P+DP+ Q + +EE P DP+ + HS
Sbjct: 41 LKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEEFETHPGFSTDPL-EEQHS 99
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G++H+Y +R LL + C V CR+CFRR KG + + + AL YI++ +
Sbjct: 100 AVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG---NKNNWQLALDYIEQHPE 156
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI L +++
Sbjct: 157 LDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPVVIPDRITLSLCNRFEKS 216
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ + H NH E + L AG+ LL+QSVLL+ +ND + LA+L T +
Sbjct: 217 QLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRNVNDSADTLADLSNTLFD 276
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY+H D G +HF + EE + I+ L KISG P ++ G K +D
Sbjct: 277 AGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLVPCLAREIGGEPSKTPLD 336
>gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407]
Length = 487
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 22/314 (7%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDN 81
D + ++ + A P + + IN +P NDPI RQF+P K + +P+ + D + ++
Sbjct: 124 DLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRM--IPDHPKLTLDSLHES 181
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDT----EAAL 135
SP+ G+V+RYP++ L VCP YC FC R VG +V S K T E
Sbjct: 182 ADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEEVF 241
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192
AYI+ + + +++ +GGD L+ +L V + L + +++ RF S+ V P RI
Sbjct: 242 AYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARILDA 301
Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
L ++AGK + + H NHP E S A +L+ AGI++ +Q+VLL+
Sbjct: 302 EDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVLLR 361
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD ++ L+R + I PYY++ D+ H R ++ I A ++ I+G
Sbjct: 362 GVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAGFM 421
Query: 306 QPFYILDLPGGYGK 319
P +++DLPGG GK
Sbjct: 422 MPQFVVDLPGGGGK 435
>gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 342
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+PIV P+R++ L+ L+ P +HANH EF A+ L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 252
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + +
Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ L ++SG P + ++PG GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339
>gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
Length = 338
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
Length = 338
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
E +I +L+ SG P ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329
>gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21]
Length = 338
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 471
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 163/303 (53%), Gaps = 21/303 (6%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
++ ++P + LI+ P DPI RQFIP EL LP+ + D + + +P+ G+ H
Sbjct: 103 AVRVSPYMIALIDWSKPYADPIRRQFIPTGSEL--LPDHPKLDLDSLHEQADAPVPGLTH 160
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDT----EAALAYIQEKSQIW 145
RYPD+ L L CPVYCRFC R VG +++ +S K T EAA YI + ++
Sbjct: 161 RYPDKALFLALDTCPVYCRFCTRSYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELE 220
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-----IQCL 200
+++ +GGD L ++ + + L + +++ +RF ++ P V PQ+I + + +
Sbjct: 221 DIVISGGDSYNLRADHIKTIGERLLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSI 280
Query: 201 KEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
E G K V I H NHP E ++ + A++ L GI + +QSVL +G+ND PE +
Sbjct: 281 HEQGRKLHKEVCIHTHFNHPNEITQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQ 340
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L++ + + PYY++ DL G + R T++ I ++ +G P +++D PGG
Sbjct: 341 LVKRLAHVNVHPYYVYVHDLVRGVENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGG 400
Query: 317 YGK 319
GK
Sbjct: 401 GGK 403
>gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
Length = 338
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 2/291 (0%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
S + + + + NP DP+ Q +P EL P+ DP+G+ + G++H
Sbjct: 44 STQFKLRVPRAFVTRMQKGNPLDPLLLQVLPHHLELEEHPDFVTDPLGEEQANQQPGVLH 103
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y R LL L C V+CR+CFRR + + S+D YIQ + I EVI +G
Sbjct: 104 KYKTRFLLTLTGACAVHCRYCFRRHF--PYQENLPKSEDWINIQHYIQSQPDINEVILSG 161
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL LS+++++ ++ L I ++ LR HSRVPIV P R++ ELI LK + + + +
Sbjct: 162 GDPLTLSNRKIKLWIERLESIPQLKFLRIHSRVPIVMPNRVDDELISILKNSRLRIILVV 221
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H+NH E + + + I + +Q+VLLKG+ND +IL +L + + PYYL
Sbjct: 222 HSNHASELDDFTCRQLQQFVAEKITVFNQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYL 281
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
H D G HF L ++ + L + G P + ++ G K +
Sbjct: 282 HVLDKVKGAHHFDLNPQDIDFLYQGLLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans]
Length = 595
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 22/310 (7%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91
+I LTP I + ++ +NP +DPI RQF+P K ++P+ + D + + SP+ G+VH
Sbjct: 138 AIRLTPHILSRVDWNNPLDDPIRRQFLPLKS--GMIPDHEHMKLDSLNEEADSPVPGLVH 195
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145
RYP R L +CPVYCRFC R VG TV E YI++ +
Sbjct: 196 RYPGRALFLATSICPVYCRFCTRSYAVGGNTDTVAKRAQKPNRARWEVIFKYIEDNDSLQ 255
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-- 200
+++ +GGD L L+++++ L I H+ +R ++ V P R N + L
Sbjct: 256 DIVLSGGDIFYLEPHLLREIVERLLSIPHIFRIRLATKGLSVAPGRFLDTNDGWMDTLMD 315
Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
++ GK V + H NH E + A RL G+I+ +Q+VLL G+N++P+ +
Sbjct: 316 ISNQGRKLGKQVCLHTHINHASEITWVTRMAARRLFAHGVIVRNQTVLLNGVNNNPDAIK 375
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L+ T + I+PYY++ D+ G R + E ++ ++ +SG P +++DLPG
Sbjct: 376 ELITTLANINIQPYYVYQCDMVQGIEDLRTPLSEILRLDKLMRGTLSGFMMPAFVIDLPG 435
Query: 316 GYGKVKIDTH 325
G GK + T+
Sbjct: 436 GGGKRLVSTY 445
>gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
Length = 333
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 10/297 (3%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSPLKG 88
E +S LTP + L + +F P+ E LP + D + + +P+ G
Sbjct: 13 EEETRFSEKLTPYLKELSKTSQAIKDMY-EFNPEYE---TLPANLDVDLLNEKTSTPVFG 68
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIW 145
V +Y ++L+ L + C CR+C R++ VG +G + S+ + + YI I+
Sbjct: 69 TVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ-IDDIVDYIANDKSIY 127
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
EVI +GGDPL + K LQ + L+ I HV+++R H+R P+ +P ++ EL++ L +A
Sbjct: 128 EVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPGKVRMELMEELAQAKP 186
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
VY+++H +HP E E I I G +LL+Q+V LK INDD + L L EL
Sbjct: 187 TVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDDKDTLKTLFLRLFELG 246
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++PYY++H T F + +E+ I+ L+ ++SGL P +++D+P GKV +
Sbjct: 247 VRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHVIDIPSASGKVVV 303
>gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20]
gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047]
gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329
gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047]
Length = 338
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
E +I +L+ SG P ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329
>gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
Length = 361
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 5/236 (2%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
DP + ++ G H+Y LL + VC YCRFCFR+ + S D E L
Sbjct: 68 DPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVEPGL 127
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--N 193
YI +I V+ TGGDPL+LS +RL ++L LR I HV+++R +++P +P R+ N
Sbjct: 128 RYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRVTDN 187
Query: 194 PELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
PEL++ L+ A ++ ++H NHP E +EEA+ I L G+ L++Q+ LL+ +NDD
Sbjct: 188 PELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRVNDD 247
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
P +LA L+ I PYY+ AG + F + + EG +IV K ++SG +
Sbjct: 248 PAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAK 303
>gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 340
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR
Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL L+ + + + H NH E + E A +++L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q VLLK +N+ E L + I PYYLH D G +H+ ++ EE
Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++I+ + ++SG P ++ G K +D H
Sbjct: 304 KEIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
Length = 332
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 144/277 (51%), Gaps = 5/277 (1%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
N + N NDP+ Q + E P +DP+ + +++ + ++H+Y +R+LL +
Sbjct: 57 NKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQDNA-IPNLLHKYHNRVLLMVKGG 115
Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C V CR+CFRR + G S + T L YI + S+I EVIF+GGDPL+ + L
Sbjct: 116 CAVNCRYCFRRHFPYEANPGNKASWRKT---LDYIAQHSEIEEVIFSGGDPLMAKDRELA 172
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+L+ L I H++ +R HSR+P+V PQRI PEL + L ++ + +H NH E E
Sbjct: 173 WLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVLVLHINHANEIDELL 232
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+ L AG+ LL+QSVLLKGINDD IL L I PYYLH D G SHF
Sbjct: 233 SRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPYYLHLLDKVEGASHF 292
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ E I L SG P ++ G K
Sbjct: 293 WIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKT 329
>gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
Length = 339
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 137/259 (52%), Gaps = 5/259 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
NP DP+ Q + +E +DP+ + N+ + + I+H+Y +R+L + C V C
Sbjct: 67 NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNC 126
Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR KGT ++ + AL YI + +I EVIF+GGDPL+ L ++K
Sbjct: 127 RYCFRRHFPYEENKGT---KQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKH 183
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L I H++ LR HSR+P+V PQRI L L E + H NH E E+ A+
Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMD 243
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L
Sbjct: 244 KLKNCGVVLLNQSVLLKNVNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 303
Query: 289 EGQKIVASLKEKISGLCQP 307
+ I L+ SG P
Sbjct: 304 QALSIYKQLQRITSGYLVP 322
>gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
Length = 342
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q + K E +I P DP+ + +++ + ++H+Y +R L+ + C V CR
Sbjct: 67 DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNA-IPSLLHKYRNRALMLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + A+ YI+ S++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ LR HSR+P+V P+RI L Q L ++ V + H NH E +E A+ +
Sbjct: 183 EEIPHITRLRIHSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +G+ LL+QSVLL+ +ND+ LANL ++ I PYYLH D G +HF ++ E
Sbjct: 243 LKRSGVTLLNQSVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++ L ++SG P ++ G K +D
Sbjct: 303 ARQLIRELLSQVSGYLVPKLAREIGGEPSKTLLD 336
>gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031]
gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031]
Length = 338
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 136/270 (50%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + E DP+ + N + I+H+Y +R+L C V CR
Sbjct: 67 NPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCR 126
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++K L
Sbjct: 127 YCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLE 184
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H+Q LR H+R+P+V PQRI E L E + H NHP E + A+ +L
Sbjct: 185 NIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKL 244
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ LL+QSVLL+G+NDD +IL L + I PYYLH D G SHF ++ E
Sbjct: 245 NTVNVTLLNQSVLLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEA 304
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+I +L+ SG P ++ G K
Sbjct: 305 MQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 343
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 161/281 (57%), Gaps = 7/281 (2%)
Query: 56 IARQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
+ R +P EELN PE + DP+ + + HRYPDR+L+ + CPV CRF
Sbjct: 49 VRRMLLPSLEELN--PELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRF 106
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C R+ T+ S + +A L+Y++ Q+ +V+ +GG+PL+L + L+++L L+
Sbjct: 107 CMRKRNWRRPLFTI-SEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKK 165
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
I+ V+++R +R+P+V+P + + L E + V++ H NHP E + EA A+ L
Sbjct: 166 IESVEVVRIGTRLPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALL 225
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
G+ + +Q+VLLKG+ND +L L R ++++PYYL H D G HF I G
Sbjct: 226 KCGVPVNNQTVLLKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGL 285
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
K++ L+ ++S L P+Y +D PGGYGKV + +K+G+
Sbjct: 286 KLLEELQTRLSPLALPYYAVDGPGGYGKVPMLPVRFEKLGS 326
>gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
Length = 342
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 146/274 (53%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ DP+ Q + ++E N P DP+ D S + G++H+Y +R LL + C V CR
Sbjct: 67 DAQDPLLLQVLTSRQEFNDAPGYSTDPL-DEQSSVVPGLLHKYRNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + ++ +AA+ YI + ++ E+IF+GGDPL+ L +++ L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEAL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ H++ LR HSR+P+V P RI L Q L V + H NH E +E +
Sbjct: 183 EKLPHLKRLRIHSRLPVVIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQM 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L AG+ LL+QSVLL+G+ND + LA+L + I PYYLH D G +HF + +E
Sbjct: 243 LKRAGVTLLNQSVLLRGVNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ +V L +SG P ++ G K +D
Sbjct: 303 ARALVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
Length = 342
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 3/289 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y
Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L+ ++ L I H++ LR HSR+P+V P+RI L Q L ++ + H N
Sbjct: 168 LMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E ++ + L AG+ LL+QSVLL+ IND LA L + I PYYLH
Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
Length = 338
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
E +I +L+ SG P ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329
>gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
Length = 340
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P EE + DP+ + ++ + G++H+Y +R L+ + C + CR
Sbjct: 67 NPHDPLLRQVLPLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q V+LKG+N+ L L + + PYY+H D G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++ L ++SG P ++ G K +D H
Sbjct: 303 AKRHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338
>gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1]
gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 336
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 164/317 (51%), Gaps = 5/317 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ ++S +L+ + + ++ + + + + + I +DP+ RQ +PQ
Sbjct: 13 QLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQILPQGL 72
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P+ DP+ + + +P +G++H+Y R+L+ C + CR+CFRR +
Sbjct: 73 ELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHF--PYEDNQ 130
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + + +++ ++ EVIF+GGDPLI S+ RLQ+ + L + ++ +RFH+R P
Sbjct: 131 LSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIRFHTRTP 190
Query: 186 IVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+V P RI+ L+ + ++G+ + +H+NHP E A+ +L +A + L +Q+V
Sbjct: 191 VVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVTLFNQAV 250
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+ND + A L + + PYYLH D AG F + E ++ + ++
Sbjct: 251 LLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQMAARLP 310
Query: 303 GLCQPFYILDLPGGYGK 319
G P ++PG K
Sbjct: 311 GFLLPRLAREVPGAPAK 327
>gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32]
gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32]
Length = 340
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 5/276 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P EE + DP+ + +++ + G++H+Y R L+ + C + CR
Sbjct: 67 NPHDPLLRQVLPLSEEFEVHQGYSADPLEEQDNA-IPGLLHKYKSRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ L ++SG P ++ G K +D H
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338
>gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 322
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%)
Query: 44 ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
A+LI N +P+ R+ +P +EL P +DP+GD + I+ +Y +R L+
Sbjct: 48 ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 105
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C V CRFCFRR + S ++ + IWEVI +GGDPL L
Sbjct: 106 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 160
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219
+ +++ + + V LR H+R+PI+ P + + + L+E A + +H NHP E
Sbjct: 161 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 219
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
EE+ A ++L +G LL+QSVLLKG+NDD E L L R E + PYYLH D A G
Sbjct: 220 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 279
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+HF ++ E ++++A ++ K+ G P + ++ G K I
Sbjct: 280 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 322
>gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96]
gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM
12163]
Length = 342
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 3/289 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y
Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L ++ L I H++ LR HSR+P+V P+RI L Q L ++ + H N
Sbjct: 168 LMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E ++ + L AG+ LL+QSVLL+ IND LA L + I PYYLH
Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 384
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 12/308 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
M +H T TS N+ + ++ ++ + +Y+ +LIN +P DPI R
Sbjct: 1 MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E E DP + ++ + G+ H+Y D +L C CRFCFR+ +
Sbjct: 58 VPHPDETKDWGEL--DPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+G DT ALAYI+ +I V+ +GGDPL+L L+ +LK L ++H+Q +R
Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173
Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
SR+P+ DP I N L++ L +P +Y+ H NHP E S A+ A+ L AGI
Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
I+ +Q+ LL+G+ND PE L+ L + PYYL G HF + IEEG I+
Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293
Query: 296 SLKEKISG 303
++ +SG
Sbjct: 294 KAQKTLSG 301
>gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 332
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%)
Query: 44 ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
A+LI N +P+ R+ +P +EL P +DP+GD + I+ +Y +R L+
Sbjct: 58 ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 115
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C V CRFCFRR + S ++ + IWEVI +GGDPL L
Sbjct: 116 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 170
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219
+ +++ + + V LR H+R+PI+ P + + + L+E A + +H NHP E
Sbjct: 171 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 229
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
EE+ A ++L +G LL+QSVLLKG+NDD E L L R E + PYYLH D A G
Sbjct: 230 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 289
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+HF ++ E ++++A ++ K+ G P + ++ G K I
Sbjct: 290 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 332
>gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116]
gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116]
Length = 340
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR
Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ +
Sbjct: 126 YCFRRHFPYQENKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR HSR+P+V P RI EL Q L+ + + + H NH E + E A +++L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKL 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ LL+Q VLLK +N+ E L + I PYY+H D G +H+ ++ EE
Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ I+ + ++SG P ++ G K +D H
Sbjct: 304 KTIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338
>gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 338
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
E +I +L+ SG P ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329
>gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
Length = 338
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 149/277 (53%), Gaps = 7/277 (2%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
L+ + NDP+ RQ + E I PE+ DP+ + + G++H+Y +R LL +
Sbjct: 62 LMRKGDANDPLLRQVLTSSAEF-ISPEDFITDPLAEQ-RTAAPGLLHKYGNRALLLVKGS 119
Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C + CR+CFRR +G + K+ + AL YI++ ++ E+IF+GGDPL+ + L
Sbjct: 120 CAINCRYCFRRHFPYQDNQG---NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELS 176
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++ L I H++ LR H+R+P+V P RI L Q + + + H NH E
Sbjct: 177 WLIDALEKIAHIKRLRIHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVL 236
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
++++L G+ LL+QSVLL+G+ND+ E+LA L I PYYLH D G +HF
Sbjct: 237 CDSMAKLKTKGVTLLNQSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHF 296
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ +E ++++ L ISG P + ++ G K
Sbjct: 297 MVNDDEARRLINGLLGCISGYLVPRLVREIAGEKSKT 333
>gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430]
gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946]
gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora
CFBP1430]
gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC
BAA-2158]
Length = 342
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 3/289 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y
Sbjct: 51 FALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+I +GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIILSGGDP 167
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L ++ L I H++ LR HSR+P+V P+RI L Q L + + H N
Sbjct: 168 LMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLMVTHIN 227
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
H E E+ + L AG+ LL+QSVLL+ IND +LA L + I PYYLH
Sbjct: 228 HAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPYYLHVL 287
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 288 DKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336
>gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
Length = 419
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 162/302 (53%), Gaps = 10/302 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66
+T AQ+L + ++ + + I + + +T +LI+ +NP DP+ R IP E
Sbjct: 65 VTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSIPSIRE 124
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + D G+ +++ L G+ H+Y L+ H C +YCR CFR+ +VG G
Sbjct: 125 TDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGISGGETA 182
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ D AA YI +I V+ +GGD + S++ +++ L+ IKH+ ++RF +R P+
Sbjct: 183 GNVDQMAA--YIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFGTRTPV 240
Query: 187 VDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V P RI +PEL+ L K +Y+ NH E + +A+ AI L +AGII+ +Q+V
Sbjct: 241 VLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIVKNQTV 300
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
LLKGINDD L L++ + PYY+ +G S F++ + EG +IV K
Sbjct: 301 LLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEEAKNMQ 360
Query: 302 SG 303
+G
Sbjct: 361 NG 362
>gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47_FAA]
gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47FAA]
Length = 387
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 167/302 (55%), Gaps = 10/302 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66
+T A +L + Q++ + I + + + +T +LIN NP DP+ R IP EE
Sbjct: 31 ITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFRMCIPSIEE 90
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ + D G+ +++ + G+ H+Y L+ H C +YCR CFR+ +VG
Sbjct: 91 TDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLVGISDDE-- 146
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++ + E AY+ + S+I ++ +GGD + S++ +++ L+ I H+ ++RF +R P+
Sbjct: 147 TADNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLIRFGTRTPV 206
Query: 187 VDPQRI--NPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
V P RI +PEL+ LK K +Y+ NHP E + EA AI L ++GI++ +Q+V
Sbjct: 207 VLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSGIVVKNQTV 266
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
LLKG+ND+ + L L++ + PYY+ +G + F+L +++G +IV + K
Sbjct: 267 LLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEIVEAAKHLQ 326
Query: 302 SG 303
+G
Sbjct: 327 NG 328
>gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810]
Length = 338
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
Length = 309
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 136/269 (50%), Gaps = 2/269 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 34 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 93
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 94 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 151
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 152 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 211
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 212 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 271
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
E +I +L+ SG P ++ G
Sbjct: 272 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 300
>gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
Length = 314
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 7/277 (2%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A LI+ N +DP+ +Q I K L+ P+ D +SP+ G++H+YP+R+LL
Sbjct: 41 FARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKYPNRVLLIAS 99
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
VC ++C+FCFR+ + + + + + YI +I EVI +GGDPL LS +L
Sbjct: 100 QVCAIHCQFCFRQNFNYVEHDAISNWVEIQN---YIINDVKINEVILSGGDPLSLSDDKL 156
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
++ + +I+H++ LR H+R +V+P RI +L++ ++ + I +H NH E S +
Sbjct: 157 STLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHINHAQELSVQ 216
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
I L + LLSQSVLL+G+ND E+L L + +L I PYYLH D G
Sbjct: 217 FAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHMLDKVQGAQD 274
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
F + + ++ LK +SG P + D Y K
Sbjct: 275 FLVKDDYAIQLHQQLKSNLSGYLVPKLVRD-SSSYSK 310
>gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
Length = 340
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 133/258 (51%), Gaps = 4/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + ++E +DP+ + + + I+H+Y +R+L C V CR
Sbjct: 69 NPKDPLFLQVMTVQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128
Query: 111 FCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR Q G +S K A+ YI +I EVIF+GGDP++ +L+ L
Sbjct: 129 YCFRRHFPYDQNPGNKVSWKQ---AIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERL 185
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
IKH+Q LR HSR+P+V P+RI E L + H NHP E E A+ +
Sbjct: 186 EKIKHLQRLRIHSRLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQK 245
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L A +ILL+QSVLLK +ND+P L L + I PYYLH D G SHF ++ E
Sbjct: 246 LTEAKVILLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDER 305
Query: 290 GQKIVASLKEKISGLCQP 307
+I L+ SG P
Sbjct: 306 ALQIYRELQALTSGYLVP 323
>gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131]
gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131]
Length = 342
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P DP+ Q + K E +I P DP+ + ++ + ++H+Y +R LL + C V CR
Sbjct: 67 DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + A+ YI+ +++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+Q LR H+R+P+V P+RI L + L + V + H NH E E A+ +
Sbjct: 183 EAIPHIQRLRIHTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +G+ LL+QSVLL+ +ND+ L NL + I PYYLH D G +HF ++ E
Sbjct: 243 LKLSGVTLLNQSVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++++ L K+SG P ++ G K +D
Sbjct: 303 ARQLIQQLLSKVSGYLVPKLAREIGGEPSKTLLD 336
>gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ]
Length = 447
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 180/333 (54%), Gaps = 19/333 (5%)
Query: 20 IKKEQIDEIK--EISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE-LNILPEERE 75
I KE +D+IK + +I +TP I LI+ +P + P+ +QF+P + L P +
Sbjct: 62 ISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCPLRKQFLPMGSQFLEDHPYYQS 121
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSK 129
D +G++ SP+ + HRYPD++L +CPVYC +C R ++G ++ + K
Sbjct: 122 DSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTRSRIIGGSTESIEKETYGANQK 181
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ Y+ ++ +V+ +GGD +L+ K+++ + + L I H++ +R ++ + P
Sbjct: 182 KWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGENLLRIPHIRRIRLATKGVAIFP 241
Query: 190 QRI--NPELIQCLKEA-------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
Q++ + + + +++ GK V I H + E ++ + A+ RL AGI++ +Q
Sbjct: 242 QKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEITKWSQMAMDRLFQAGIVVRNQ 301
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VL +G+N+ + + L R L I+PYY++ D+ G HFR T++E +++ +++
Sbjct: 302 AVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPGCEHFRTTLKEAEELEKAVRGT 361
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
+G P ++ DLPGG GK + ++ NG
Sbjct: 362 TAGFNTPTFVCDLPGGGGKRHVASYEYYDEENG 394
>gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 338
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010]
gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010]
Length = 335
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 139/272 (51%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ RQ P +E DP+GD+ GI+ +Y R LL C ++CR
Sbjct: 65 DANDPLLRQVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCR 124
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR S + S + ++ + I EVI +GGDPL L +L K++ L
Sbjct: 125 YCFRRHFPYSDSNPL--SSQWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLA 182
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR H+R+PIV P+RIN L+ ++ V + IHANH E A A+ L
Sbjct: 183 EIPHLKRLRIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISL 242
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG LL+Q+VLL+GIND E L+ L ++ + PYYLH D AG HF +
Sbjct: 243 KQAGCQLLNQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRA 302
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
K+V L++ + G P + + G K I
Sbjct: 303 VKLVDDLRKVLPGYLVPRLVREQQGEASKTVI 334
>gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
Length = 336
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 5/258 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
N DP+ Q + +E +DP+ + I+H+Y +R+LL + C + CR
Sbjct: 66 NAQDPLFLQAMSSADEFLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCR 124
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR +G + + + AL YI QI EVIF+GGDPL+ L ++K L
Sbjct: 125 YCFRRHFPYADNQG---NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKL 181
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+Q LR H+R+P+V PQRI + L E+ + H NH E E+ A+++
Sbjct: 182 EKIPHLQRLRIHTRLPVVIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNK 241
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L NAG++LL+QSVLLK IND+ + L NL I PYYLH D G SHF + +
Sbjct: 242 LKNAGVVLLNQSVLLKNINDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQR 301
Query: 290 GQKIVASLKEKISGLCQP 307
+I L+ SG P
Sbjct: 302 AVEIYRELQSLTSGYLVP 319
>gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
Length = 339
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 5/259 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
NP DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C
Sbjct: 67 NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNC 126
Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR KGT ++ + AL YI E+ +I EVIF+GGDPL+ L+ ++K
Sbjct: 127 RYCFRRHFPYQDNKGT---KQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKH 183
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L I H++ LR HSR+P+V PQRI + L + + H NH E + A++
Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMA 243
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L + G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L
Sbjct: 244 KLKDCGVVLLNQSVLLKNVNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDA 303
Query: 289 EGQKIVASLKEKISGLCQP 307
KI L+ SG P
Sbjct: 304 RALKIYKELQRISSGYLVP 322
>gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1]
Length = 340
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 2/257 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q + ++E +DP+ + + + I+H+Y +R+L C V CR
Sbjct: 69 NPKDPLFLQVMTAQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR Q +S + A+ YI +I EVIF+GGDP++ +L+ L
Sbjct: 129 YCFRRHFPYDQNPGNKTS--WQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLE 186
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H+Q LR HSR+P+V P+RI E L ++ H NHP E EE A+ +L
Sbjct: 187 KIPHLQRLRIHSRLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKL 246
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A + LL+QSVLLK +ND+P L L + I PYYLH D G SHF ++ E+
Sbjct: 247 VGAKVTLLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKA 306
Query: 291 QKIVASLKEKISGLCQP 307
+I L+ SG P
Sbjct: 307 LQIYKELQALTSGYLVP 323
>gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 333
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR
Sbjct: 64 DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122
Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+CFRR V S K + L YI +++ EVIF+GGDPL+ L ++
Sbjct: 123 YCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L A ++LL+QSVLLKG+ND+ +IL L E + PYYLH D G SHF +
Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296
Query: 287 IEEGQKIVASLKEKISGLCQP 307
+ +I L+ SG P
Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317
>gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
Length = 340
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P EE ++ DP+ + ++ + G++H+Y R L+ + C + CR
Sbjct: 67 NPHDPLLRQVLPLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ L ++SG P ++ G K +D
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLD 336
>gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
Length = 349
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 3/273 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NPNDP+ RQ + +E + DP+ + N S + G++H+Y R+L+ L C + CR
Sbjct: 71 NPNDPLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCR 129
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRRE + + Y+ +I EVI +GGDPL ++ L+ ++ L
Sbjct: 130 YCFRREFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLE 187
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I + LR H+R+P+V PQR+ LI L + + +H NHP E E A+ RL
Sbjct: 188 RIPSIIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRL 247
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
GI LL+QSVLL G+N++ LA L I PYYLH D G HF + +
Sbjct: 248 HQNGIHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQA 307
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
KI+ L +++G P + + G K ID
Sbjct: 308 IKIMQELNTRLAGFLVPKLVREEAGKTSKTPID 340
>gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
Length = 338
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae]
Length = 464
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 19/303 (6%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY
Sbjct: 117 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 176
Query: 94 PDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWE 146
PD+ L VCPVYCRFC R VG Q TV K E YI ++ +
Sbjct: 177 PDKNDSYLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTD 236
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL--- 200
V+ +GGD L +L+++ TL I H++ +RF S+ V P RI + E + L
Sbjct: 237 VVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEI 296
Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+E GK + + H NHP E S A +L + + + +Q+VLL +N++ +
Sbjct: 297 SNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKR 356
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L+R + I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG
Sbjct: 357 LIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGG 416
Query: 317 YGK 319
GK
Sbjct: 417 GGK 419
>gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 338
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 2/267 (0%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P +E I+P D +GD G++ +Y R LL C + CR+C
Sbjct: 71 HDPLLRQVLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYC 130
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ + A+A I I EVI +GGDPL L+ +L ++ L I
Sbjct: 131 FRRHFPYAEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATI 188
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR HSR+P+V P+RI+ ++ + PV IHANH EF A+ RL
Sbjct: 189 PHIRRLRIHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQ 248
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG LL+Q+VLL+G+ND + LA+L + PYYLH D G +HF + E ++
Sbjct: 249 AGAQLLNQAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARE 308
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
+ L ++SG P + ++ G GK
Sbjct: 309 LHRQLAARLSGYLVPKLVREVQGDPGK 335
>gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976]
gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976]
Length = 333
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR
Sbjct: 64 DKNDPLFLQAMSAAEEFLQMQGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122
Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+CFRR V S K + L YI +++ EVIF+GGDPL+ L ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELNWLI 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I H++ LR H+R+P+V P RI +L L ++ V I H NHP E E +
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDR 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L A ++LL+QSVLLKGIND+ + L L + + PYYLH D G SHF +
Sbjct: 237 LNQLRQANVVLLNQSVLLKGINDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296
Query: 287 IEEGQKIVASLKEKISGLCQP 307
++ +I L+ SG P
Sbjct: 297 DQQAAEIYKELQRISSGYLVP 317
>gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
Length = 337
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 153/272 (56%), Gaps = 3/272 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP DP+ Q +P+++E +DP+ D + + + G++H+Y +R+L + C + CR
Sbjct: 67 NPKDPLFLQVMPKQQEFIQQAGFIKDPL-DEHEAVVPGLLHKYTNRVLFIVRGGCAINCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + + A+ YI+ K +I EVIF+GGDPL+ + ++L ++ L
Sbjct: 126 YCFRRHFPYQDNSN--NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ LR H+R+P+V P R+ EL+ LK++ + +H NHP E + E AA+++
Sbjct: 184 QIPHLKRLRIHTRLPVVMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKF 243
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AGI L +Q+VLL IND+ + L L + RI+PYYLH D G SHF + E+
Sbjct: 244 TTAGISLYNQAVLLADINDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKA 303
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I+ L ++ G P + ++ G K I
Sbjct: 304 VAIMNELLLRLPGFLVPKLVREIGGEKSKTPI 335
>gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
Length = 338
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 136/274 (49%), Gaps = 2/274 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C
Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L + LL+QSVLLK +NDD +IL L + I PYYLH D G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
E +I +L+ SG P ++ G K
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334
>gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4]
gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4]
Length = 340
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ +P EE + DP+ D + + G++H+Y +R L+ + C + CR
Sbjct: 67 NPHDPLLRQVLPLSEEFEVHQGYSADPL-DEQGNAIPGLLHKYKNRALMIVKGGCAINCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CF R KG S + +L Y+ + +I EVI +GGDPL+ ++ +++ +
Sbjct: 126 YCFSRHFPYQDNKG---SKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAI 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+I H++ LR HSR+P+V P RI +L L+ + + + H NH E + E A +++
Sbjct: 183 EHIPHIKRLRIHSRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAK 242
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G+ LL+Q+VLLK +ND E L + I PYYLH D G +H+ ++ +
Sbjct: 243 LKQVGVTLLNQAVLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQ 302
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
++I+ + ++SG P ++ G K +D
Sbjct: 303 AKEIMRGVITRVSGYLVPKLTREIGGRPSKTPLD 336
>gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 333
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR
Sbjct: 64 DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122
Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+CFRR V S K + L YI +++ EVIF+GGDPL+ L ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L + ++LL+QSVLLKG+ND+ +IL L E + PYYLH D G SHF +
Sbjct: 237 LNQLRQSKVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296
Query: 287 IEEGQKIVASLKEKISGLCQP 307
+ +I L+ SG P
Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317
>gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125]
gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis
TAC125]
Length = 308
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 143/274 (52%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
+ NDP+ Q +P+ +E +DP+ + +N P G++H+Y R+L+ C V C
Sbjct: 35 DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQP--GLLHKYKSRVLVMFKTGCAVNC 92
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R+CFRR + L+ + AL+YI+ + I EVI +GGDPL+ + L L
Sbjct: 93 RYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVILSGGDPLMAKDDAISWFLDEL 150
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ ++ +R H+R+P+V P RI EL + L + + H NH E ++ AA+ +
Sbjct: 151 EQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVFVNHINHANEIDDDFKAAMQK 210
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L G++L +Q+V+LK +ND NL + + PYYLH D G SHF ++ E+
Sbjct: 211 LKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPYYLHLLDKVEGASHFDISEEQ 270
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
KI+A L E + G P + ++ G K ID
Sbjct: 271 AIKIMAELLEALPGFLVPKLVREIGGEKSKTPID 304
>gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
Length = 337
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 5/274 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
+ NDP+ Q +P+ +E +DP+ + +N P GI+H+Y R+L+ C V C
Sbjct: 64 DANDPLLLQVMPRHQEFLKKSGFNKDPLLEQDNDQP--GILHKYKSRVLVMFKTGCAVNC 121
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R+CFRR + L+ K AL YI+ + I EVI +GGDPL+ + L L
Sbjct: 122 RYCFRRHFPYQENQ--LNKKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDEL 179
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
+ ++ +R HSR+P+V P RI EL L+++ + H NH E E AA+ +
Sbjct: 180 EKLPQIKRMRIHSRLPVVIPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQK 239
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L +AG++LL+Q+V+LK +ND + NL + + PYYL+ D G SHF + E+
Sbjct: 240 LKHAGVMLLNQAVILKDVNDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQ 299
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
KI+A L + + G P + ++ G K ID
Sbjct: 300 AIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 333
>gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 333
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y
Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106
Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R+L + + C + CR+CFRR V S K + L YI +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V +
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NHP E E +++L A ++LL+QSVLLKG+ND+ +IL L E + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
LH D G SHF + + +I L+ SG P
Sbjct: 281 LHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYLVP 317
>gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp.
PRwf-1]
gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1]
Length = 372
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 2/276 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q +P K+E + DP+ +N H+P+KG++H+Y R+L+ + C ++CR
Sbjct: 92 DANDPLLLQVLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCR 151
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFR+ + + S YI++ +I EVI +GGDPL ++++RL L+ L
Sbjct: 152 YCFRQHF--DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALE 209
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ + +R H+R+ IV P R++ EL+ L+ + + + +H NH E +
Sbjct: 210 DLPQINTIRLHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHA 269
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
GI LL+Q+VLL G+ND + L E + PYYLH D AG +HF + ++
Sbjct: 270 RQKGITLLNQTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQA 329
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+ + + G P + +LP K +D ++
Sbjct: 330 IDLYWQMLAHLPGYLVPKLVQELPHKPFKTPVDLYH 365
>gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
Length = 338
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 3/270 (1%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDP+ RQ +P +E + DP+ ++++S ++G++H+Y RILL L C V CR+C
Sbjct: 69 NDPLLRQVLPITDEDKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYC 127
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR + L+ K + Y++ + EVI +GGDPL+ L V+ L+ +
Sbjct: 128 FRRHF--PYQDNNLNKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQL 185
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
K ++ LR H+R+P+V PQR+ L + LK V +H NH +E + A+ +L +
Sbjct: 186 KQLKRLRIHTRLPVVIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHH 245
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AGI LL+QSVLL+G+ND+ E L L + I PYYL D G HF L ++ +
Sbjct: 246 AGIQLLNQSVLLRGVNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKA 305
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++ + + G P ++ G K I
Sbjct: 306 LLLEISAALPGYLVPRLSREIAGEKSKTLI 335
>gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
Length = 337
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
DP+ Q I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CF
Sbjct: 68 DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126
Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
RR V S K T + +L YI+ S++ EVI +GGDPL+ + + L
Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ +R HSR+P+V P RI EL + L ++ V + H NH E + + +
Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQK 240
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + ++LL+QSVLLKGIND+ + L L I PYYLH D AG SHF +
Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSR 300
Query: 290 GQKIVASLKEKISGLCQP 307
+I L+ SG P
Sbjct: 301 AFEIYRELQRITSGYLVP 318
>gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 329
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 5/278 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVC 105
I +PNDP+ Q +P+ +E +DP+ + +N P G++H+Y R+L+ C
Sbjct: 52 IRKGDPNDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNDQP--GLLHKYKSRVLVMFKTGC 109
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
V CR+CFRR + L+ K L+YI+ S I EVI +GGDPL+ +
Sbjct: 110 AVNCRYCFRRHFPYQENQ--LNKKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWF 167
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
L L + ++ +R HSR+P+V P R+ EL + L ++ + H NH E + A
Sbjct: 168 LDELEQLPQIKRMRIHSRLPVVIPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKA 227
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ +L A + LL+Q+V+LK +ND + NL + + PYYL+ D G SHF +
Sbjct: 228 AMQKLKQANVTLLNQAVILKDVNDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDI 287
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
E+ KI+A L + + G P + ++ G K ID
Sbjct: 288 NEEDAIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 325
>gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+]
gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+]
Length = 491
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 22/304 (7%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I +TP I + +N NP +DPI RQF+P K L +P+ + D + + SP+KG+VH
Sbjct: 146 AIRMTPYILSRVNWENPRHDPIIRQFLPLKSVL--IPDHPKLALDSLHEEADSPVKGLVH 203
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
RY D+ L VCP YC FC R VG+ TV + + E A AYI+ +
Sbjct: 204 RYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTPALQ 263
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCLKE 202
+++ +GGD L +L+ + L + +++ RF S+ V P RI E + L +
Sbjct: 264 DIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNALID 323
Query: 203 AGKPVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
A H NHP E S + A +L G+++ +Q+VLL+G+NDD + ++
Sbjct: 324 ISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVDTMS 383
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L+R + ++ PYY++ D+ H R ++ + A ++ I+G P +++DLP
Sbjct: 384 KLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVDLPA 443
Query: 316 GYGK 319
G GK
Sbjct: 444 GGGK 447
>gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 316
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 149/255 (58%), Gaps = 8/255 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI---LPEERED 76
+ +++ + ++E+ + + + +L+N ++ NDPI + +P ++EL + + E +D
Sbjct: 37 LSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRKLALPSEDELIVAGSMGETTKD 96
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P GD+ H+ G++H+YP L+ C +YCR CFR+ +VG + ++ + A
Sbjct: 97 PYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRKAIVGLPNDKTV--ENFQRAAT 154
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195
YI+E +I VI +GGDPL+++ +R++K+L++L I HV +R +R P+V P R + +
Sbjct: 155 YIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHVNYVRLGTRTPVVYPMRFFDDD 214
Query: 196 LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++C +E K +Y+ H NH E + A A+ R+ G+ + +Q+VLL+G+ND
Sbjct: 215 LLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQTGVTVNNQAVLLEGVNDSASD 274
Query: 254 LANLMRTFVELRIKP 268
+ NLM V + KP
Sbjct: 275 IENLMNGLVTIWRKP 289
>gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 333
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR
Sbjct: 64 DKNDPLFLQAMSAAEEFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122
Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+CFRR + V S K + L YI +++ EVIF+GGDPL+ L ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLI 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L A ++LL+QSVLLKG+ND+ + L L + + PYYLH D G SHF +
Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296
Query: 287 IEEGQKIVASLKEKISGLCQP 307
+ +I L+ SG P
Sbjct: 297 DRQAAEIYKELQRISSGYLVP 317
>gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968]
gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150]
gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968]
gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150]
Length = 327
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 141/270 (52%), Gaps = 2/270 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ Q + EL E DP+ +++++ ++G++H+Y R+LL + VC V CR
Sbjct: 57 NPHDPLLLQVLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCR 116
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + + YI + + I EVI +GGDPL+ S L ++++ L
Sbjct: 117 YCFRRHF--PYQANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLE 174
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H+ LR H+R+P+V P+RI+ L+ LK+ I +H NH E + + L
Sbjct: 175 QIPHLHTLRIHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHEL 234
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
LL+Q+VLL GIND+ +LA+L +T + PYYLH D G +HF L
Sbjct: 235 RRIDCHLLNQTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTV 294
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ I L+ + G P + + PG K
Sbjct: 295 KGIYQQLQNLLPGYMLPRLVREEPGKSSKT 324
>gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
atlantica T6c]
gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c]
Length = 341
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 7/283 (2%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKL 101
A I +PND + +Q P ++E DP+ + N P G++H+Y R+LL +
Sbjct: 59 FAARIKKGDPNDALFKQVFPSEKEFLTDLNYVLDPLQEQQNEKP--GVLHKYKSRVLLLV 116
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C V CR+CFRR S L+ + + L YI++ I EVI++GGDPL+
Sbjct: 117 RGGCAVNCRYCFRRHFPYSDNH--LNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDF 174
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPVYIAIHANHPYEFS 220
L + + I H++ +R H+R+P+V P RI P+LI+ K KPV + +H NHP E
Sbjct: 175 LAWLTDEIAEITHIKRIRIHTRLPVVIPARITPQLIEWFTKTRLKPVMV-LHINHPQEID 233
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ L AG+ LL+Q VLLK IND ++ L + + PYYLH D G
Sbjct: 234 FALQEVLQELTKAGVTLLNQGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGA 293
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HF + + I+A + +++ G P + ++ G GK ID
Sbjct: 294 QHFDQDDKIAKDIMAKMIKRLPGFLVPKLVREIGGQPGKTPID 336
>gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021]
gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021]
Length = 297
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+S+ + + I NP DP+ Q + E DP+ + N + + I+H+Y
Sbjct: 51 FSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQ 110
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+R+L C V CR+CFRR + + K + AL YI S+I EVIF+GGDP
Sbjct: 111 NRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLALDYIATHSEIEEVIFSGGDP 168
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L ++K L I H+Q LR H+R+P+V PQRI E L E+ + H N
Sbjct: 169 LMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHIN 228
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + A+ +L + LL+QSVLLK +NDD +IL L + I PYYLH
Sbjct: 229 HPNEIDQIFANAMQKLNAVNVTLLNQSVLLKSVNDDAQILKILSDKLFQTGILPYYLHLL 288
Query: 275 DLAAGTSHF 283
D G SHF
Sbjct: 289 DKVQGASHF 297
>gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
Length = 337
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
DP+ Q I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CF
Sbjct: 68 DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126
Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
RR V S K T + +L YI+ S++ EVI +GGDPL+ + + L
Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
I H+ +R HSR+P+V P RI EL + L ++ V + H NH E + + +
Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQK 240
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
L + ++LL+QSVLLKGIND+ + L L I PYYLH D AG SHF +
Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSR 300
Query: 290 GQKIVASLKEKISGLCQP 307
+I L+ SG P
Sbjct: 301 AFEIYRELQRITSGYLVP 318
>gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
Length = 308
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+ NDP+ Q +P+ +E +DP+ DNN G++H+Y R+L+ C V
Sbjct: 35 DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQP---GLLHKYKSRVLVMFKTGCAVN 91
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
CR+CFRR + L+ + AL+YIQ I EVI +GGDPL+ + L
Sbjct: 92 CRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVILSGGDPLMAKDDAISWFLDE 149
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L I ++ +R HSR+P+V P RI +L + L ++ V H NH E + A++
Sbjct: 150 LEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIFVNHINHANEIDSDFKNAMN 209
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
L A ++LL+Q+V+LK +ND + NL + + PYYLH D G SHF +
Sbjct: 210 MLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPYYLHLLDKVEGASHFDIDEA 269
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ KI+A L E + G P + ++ G K ID
Sbjct: 270 QAIKIMAELLEALPGFLVPKLVREIGGQKSKTPID 304
>gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
Length = 333
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
A + + NDP+ Q + E + +DP+ D HSP I+H+Y +R+L +
Sbjct: 56 FAERMQKGDKNDPLFLQAMTSSAEFTQVEGFTKDPL-DEQHSPAPNILHKYHNRLLFMVK 114
Query: 103 HVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C + CR+CFRR E V S K + +L YI E +I EVI +GGDPL+
Sbjct: 115 NSCAINCRYCFRRHFPYEDVKSGKSA------WQQSLQYIAEHPEIEEVILSGGDPLMAK 168
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ L +L L I HV+ LR H+R+P+V P RI +L ++ V + H NH E
Sbjct: 169 DEELDWILTALEKITHVKTLRIHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANE 228
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
I++L A +ILL+QSVLLKG+ND L L + I PYYLH D
Sbjct: 229 IDAVLANKIAKLKQADVILLNQSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVE 288
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQP 307
G SHF + E I L++ SG P
Sbjct: 289 GASHFFVEDEIAFSIYKELQKISSGYLVP 317
>gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 368
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 15/334 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ K +TS L N + ++ + ++ +++ + +LI+ + DPI +P
Sbjct: 1 MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-Q 121
EL DP + +++ G+ H+Y LL L VC CRFCFR+ + S +
Sbjct: 61 DPRELE--SGGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ TV +D +AYI+E ++I V+ TGGDPL L + L+ VL+ LR I HV I+R
Sbjct: 119 RETV---RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIG 175
Query: 182 SRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGII 236
S++ +P RI + EL+ L P +Y+ H NHP E ++ +I A L A +I
Sbjct: 176 SKMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVI 235
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+++Q+ +L GIN + E L L R I PYY+ A G F++ +EE IV
Sbjct: 236 VVNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQG 295
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI---DTHNI 327
+ SGL + + + GKV++ D NI
Sbjct: 296 AWKNCSGLAKRARFI-MSHSTGKVEVVGKDAENI 328
>gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20]
gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 333
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y
Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106
Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R+L + + C + CR+CFRR V S K + L YI +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V +
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NHP E E +++L A ++LL+QSVLLKG+ND+ + L L + + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNAQTLKVLSDKLFDSGVLPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
LH D G SHF + ++ +I L+ SG P
Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317
>gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 461
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 21/303 (6%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
S+ ++P + +LI+ ++P DP+ QFIP LP+ + D + + +P+ G+ H
Sbjct: 97 SVRVSPYMLSLIDWNDPYGDPLRTQFIPLASRF--LPDHPKLGLDSLHERADAPVPGLTH 154
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIW 145
RY D+ L L CPVYCRFC R VG V + + + A AYI + ++
Sbjct: 155 RYADKALFLPLDTCPVYCRFCTRSYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELE 214
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL--- 200
+++ +GGD L ++L + +TL + ++Q +R ++ P V PQ+I + E I +
Sbjct: 215 DIVVSGGDAYNLRPEQLGAIGETLLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRT 274
Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
++ K V I H NHP E + A+++L GI + +QSVL +G+ND PE +
Sbjct: 275 VELGRKLHKEVVIHTHFNHPNEITGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKL 334
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L++ + + PYY++ DL G R T+ G I ++ +G P +++D PGG
Sbjct: 335 LVKRLGHVHVHPYYVYIHDLVRGVEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGG 394
Query: 317 YGK 319
GK
Sbjct: 395 GGK 397
>gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 333
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y
Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106
Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R+L + + C + CR+CFRR V S K + L YI +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V +
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H NHP E E +++L A ++LL+QSVLLKG+ND+ + L L + + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNVQTLKVLSDKLFDSGVLPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
LH D G SHF + ++ +I L+ SG P
Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317
>gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 520
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 170/339 (50%), Gaps = 18/339 (5%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLRH + + L + + I+++ ++ Y + LTP A+LI P NDP+ Q +
Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ E P +HSP + I YP + +K ++C +YC C R +G+
Sbjct: 217 PTGEMVD--NAGVEIPPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + AL YI+ +I +V+ TGGD L+L + L+ +L L I+HV++ R
Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQRI+ EL+ L+ + KP+ + N E + + AA ++ +++
Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIV 294
Q+VLLKGIND + L T E ++PYY+ +P H R+ + GQ I+
Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF----KHLRVPVAVGQSII 449
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
S+ ISG P YI GK+ + N+ + G G
Sbjct: 450 ESMYGNISGDAIPRYI---ATAGGKIPLHRTNVLEHGQG 485
>gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
Length = 519
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 20/301 (6%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
I ++ ++ HY + LTP A+LI P N NDP+ Q +P E ++ + E P +HS
Sbjct: 177 ITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSVPTGEMVDNVGVEI--PPVAADHS 234
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P + I YP + +K ++C +YC C R +G +K + + K AL YI+ I
Sbjct: 235 PARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-KKDRIYNKKAYLEALEYIKNNKNI 293
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ TGGD +L + ++ +L+ L I HV++ R +R+P+ PQR++ EL+ L+E+
Sbjct: 294 RDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLGTRIPVTTPQRVDQELLDILEESN 353
Query: 205 --KPVYIAIHANHPYE---FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
KP+ + N E S+E IS+ +A +L+Q+VLL+GIND + L
Sbjct: 354 DKKPLRVVTQINTAQEITPISKEVFKQISKRVSA---VLNQAVLLRGINDSKVKMWKLCE 410
Query: 260 TFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
T E ++PYY+ +P A H R+ ++ GQ I+ + ISG P YI
Sbjct: 411 TIQEAYVRPYYVFNCSYRNPQFA----HMRVPVQVGQDIIEGMYGNISGDAIPRYIATAG 466
Query: 315 G 315
G
Sbjct: 467 G 467
>gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
Length = 348
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+DP+ Q +P E + DP+ + +++ KGI+ +Y R LL C ++CR
Sbjct: 77 DPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQKYHGRALLITTSACAIHCR 136
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR S+ S + ALA + + E+I +GGDPL+L++ L ++L +
Sbjct: 137 YCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGGDPLMLNNPVLDELLTLIA 194
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ + +R H+R+PI+ P RI+ L+ L + IHANH E A++RL
Sbjct: 195 ELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIHANHGAELDASVEKALARL 254
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
++L+Q+VLLKG+NDD LA L E + PYYLH D G +HF E
Sbjct: 255 RPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLHQLDKVQGAAHFDCGDERL 314
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
++ +L+ K+ G P + ++PG K I
Sbjct: 315 SSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346
>gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
Length = 333
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 11/261 (4%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ NDP+ Q + E + +DP+ + HSP I+H+Y +R+L + + C + CR
Sbjct: 64 DKNDPLFLQAMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCR 122
Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+CFRR E V S K + +L YI E +I EVI +GGDPL+ + L +L
Sbjct: 123 YCFRRHFPYEDVKSGKTV------WQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWIL 176
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
L I HV+ LR H+R+P+V P RI +L ++ V + H NH E
Sbjct: 177 TALEKINHVKTLRIHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANK 236
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
++ L +G++LL+QSVLLKG+ND L L + I PYYLH D G SHF +
Sbjct: 237 MAELKQSGVVLLNQSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVE 296
Query: 287 IEEGQKIVASLKEKISGLCQP 307
E I L++ SG P
Sbjct: 297 DEVAFSIYKELQKISSGYLVP 317
>gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 521
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
++E+ ++ Y + LTP A LI P + +DP+ Q +P E ++ E P +HS
Sbjct: 180 LEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSVPTGEMVDNAGVEM--PPVAADHS 237
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P + I YP + +K ++C +YC C R +G +K + + AL YI+ +I
Sbjct: 238 PARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-KKDRIYPEQAYSEALDYIRRDRRI 296
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V+ TGGD +L K L+ +L L ++HV+I R +R+P+ PQR++ EL+ L+E+
Sbjct: 297 RDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLGTRIPVTTPQRVDQELLDILEESN 356
Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
KPV + N E + + A R++ A +L+Q+VLLKGIND +A+L T
Sbjct: 357 DKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLNQAVLLKGINDSFVKMAHLCETIQ 416
Query: 263 ELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
E ++PYY+ +P SH R+ +E+G+ IV + ISG P YI G
Sbjct: 417 EAYVRPYYIFNCSYRNPQF----SHLRVPVEKGRDIVEGMYGNISGDAIPRYIATAGG 470
>gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 473
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 163/308 (52%), Gaps = 17/308 (5%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKGIVHRY 93
S+ ++P + +LI+ +P DP+ QFIP L P+ D + + +P+ G+ HRY
Sbjct: 95 SVRVSPYLLSLIDWDHPYEDPLRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRY 154
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKD-TEAALAYIQEKSQIWEV 147
D+ L L CPVYCRFC R VG +K ++ + +D + A Y+ + ++ ++
Sbjct: 155 VDKALFLTLDTCPVYCRFCTRSYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDI 214
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK---E 202
+ +GGD L ++++ + +TL + +++ +RF ++ P V PQ++ + E + L E
Sbjct: 215 VISGGDSYQLKARQIRHIGETLLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVE 274
Query: 203 AG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
G K V + H NHP E + A+ L GI + +QSVL +G+ND E + L+
Sbjct: 275 LGRKLHKEVALHTHFNHPNEITAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLV 334
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+ L ++PYY++ D+ G R TI+ G I ++ +G P +++D PGG G
Sbjct: 335 KRLSYLNVQPYYVYMHDMVKGVEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGG 394
Query: 319 KVKIDTHN 326
K I ++
Sbjct: 395 KRAIHSYE 402
>gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 370
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 153/286 (53%), Gaps = 17/286 (5%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
+D + SN Y ++L +N +P+DPI R IP +EL+ R D + ++S
Sbjct: 28 MDTFEFRSNEYYLSL-------VNWDDPDDPIRRIIIPSVQELDQWG--RLDASNEQSYS 78
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + C +CR+CFR+ + + ++ VL+ D +AA Y++ +
Sbjct: 79 VLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DLDAACDYVRNHPE 136
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
I V+ TGGD L+LS RL+K++ LR I HV+I+R +++ P R+ + EL++ +K
Sbjct: 137 INNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYRVLNDQELLEMVK 196
Query: 202 EAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ P +Y H HP E ++ ++ A RL AG IL +Q+ +L+G+NDDP++L L
Sbjct: 197 KYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRGVNDDPQVLGELF 256
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ + PYY+ G + + +EE + + + SGL
Sbjct: 257 NRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGL 302
>gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 343
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
N DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C
Sbjct: 71 NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130
Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR Q KG + ++ + AL YI +I EVI +GGDPL+ + ++K
Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L + H+ LR HSR+P+V PQRI + L + + H NH E E+ A+
Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L
Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307
Query: 289 EGQKIVASLKEKISGLCQP 307
+ +I L+ SG P
Sbjct: 308 QALRIYKQLQRITSGYLVP 326
>gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 343
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
N DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C
Sbjct: 71 NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130
Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
R+CFRR Q KG + ++ + AL YI +I EVI +GGDPL+ + ++K
Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
L + H+ LR HSR+P+V PQRI + L + + H NH E E+ A+
Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
+L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L
Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307
Query: 289 EGQKIVASLKEKISGLCQP 307
+ +I L+ SG P
Sbjct: 308 QALRIYKQLQRITSGYLVP 326
>gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
Length = 379
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 7/297 (2%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ +E D I H+ + A LI+ +P DP+ + +P E + D G
Sbjct: 31 LGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQD--DHGSLDTSG 88
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + + G+ H+Y +L + C +CR+CFRR ++ T + +D + A+AYIQ
Sbjct: 89 ETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQ 148
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
+I V+ +GGDP++ S +RL +L L I H+ +R +++P P R +PEL+
Sbjct: 149 THPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELL 208
Query: 198 QCLKEAGKPVYIAI--HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
Q L + + I H +HP E + A A++ L NAG +L +Q L++G+N +++
Sbjct: 209 QVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDVME 268
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311
L + L + P YL HP HF+L I EG K+V L+++ +G + F YIL
Sbjct: 269 TLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKRFRYIL 325
>gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 358
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 9/284 (3%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
++ + N++ +LIN +P DPI + IP E+ + DP + ++
Sbjct: 24 LEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNSAEM--VKWGSLDPSMEARNTKSP 81
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G+ H+Y L+ + C +CRFCFR+ + + + +D + YI+ +I V
Sbjct: 82 GLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDEKI--RDLSTDIDYIRSHPEISNV 139
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCLKE 202
+ +GGD L++ RL K++ L IKHV+ +R +++P +P RI + +IQ
Sbjct: 140 LLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKMPAYNPFRITGDESLQAMIQENSR 199
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+GK +Y NHP E ++EA A+ L +G L +Q+ +L G+N+DPE L+ L
Sbjct: 200 SGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLANQTPILNGVNNDPETLSGLCSNLA 259
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
E PYYL AAG HF + +E +I K +SGL +
Sbjct: 260 EAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKRSLSGLAK 303
>gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437]
Length = 377
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 16/307 (5%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + + + ++ + ++P ++ L +DP+A+QFIP E E+ G
Sbjct: 9 VHRTEREMVLDVIGKFRTKMSPALSRLAKQ---SDPVAKQFIPSPYEALDFGTEKPFEEG 65
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
NNH + G+ Y DR +L C YCR+CF++ + +S +D + A+ +I+
Sbjct: 66 KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
S+I V+ TGGDPL+ + L+KVL + I H++ +R +R + P+++ P+L +
Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183
Query: 200 LKE----------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ K + I + NH E + E + A RL GI + Q VLLKGIND
Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
+ L+ TF+ I PYYL H G HFR ++++G ++ L SG Y
Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELS-PYSGTTTFQY 302
Query: 310 ILDLPGG 316
+ P G
Sbjct: 303 VYVTPIG 309
>gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP]
gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 330
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 5/255 (1%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
DP+ Q + ++E +DP+ + +SP I+H+Y +R+L + + C + CR+CF
Sbjct: 64 DPLFLQAMSLQDEFVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCF 122
Query: 114 RREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
RR ++ K L+ + LAYI + ++ EVIF+GGDP++ L +L + I
Sbjct: 123 RRHFPYAEVKSGPLA---WQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQI 179
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H++ LR H+R+P+V P RIN +L L ++ + + H NH E + + IS L
Sbjct: 180 PHIKTLRIHTRLPVVIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQ 239
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
A + +L+Q+VLLKGIND+ + L L I PYYLH D G SHF + ++
Sbjct: 240 ANVTVLNQAVLLKGINDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALV 299
Query: 293 IVASLKEKISGLCQP 307
I L+ SG P
Sbjct: 300 IYKELQRISSGYLVP 314
>gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
Length = 456
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 19/316 (6%)
Query: 26 DEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIP-QKEELNILPEEREDPIGDN 81
++++ +H +AL +P + LI+ +P +DPI QF+P + ++ P + D + +
Sbjct: 81 EDLQAALDHAPMALRISPYLLGLIDWRDPLHDPIRTQFLPLRSQQQPDHPLLQLDSLHEQ 140
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAAL 135
SP+ G+ HRYPD+ L CPVYCRFC R VG+ V S E A
Sbjct: 141 EDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRSYAVGNDTPEVEKLALTTSLARWEQAF 200
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192
AYI + + +++ +GGD L LQ + + L + +++ +R+ ++ V PQ+I
Sbjct: 201 AYIASQPDLEDIVISGGDSYNLKADHLQLIGERLLKMPNIRRIRYATKGLCVMPQKILSD 260
Query: 193 --NPELIQCLKEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + + E G K V + H NHP E + A++ L GI + Q+VL +
Sbjct: 261 HAWTDALTRVAELGRSLHKDVVVHTHFNHPAEITSITQDAMNVLVERGIHVRCQTVLQRT 320
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP + L+R + + PYY++ D+ G R + QK+ ++ +G
Sbjct: 321 VNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGVEDLRTPLATAQKLEKYVRGATAGFNT 380
Query: 307 PFYILDLPGGYGKVKI 322
P ++LD PGG GK +
Sbjct: 381 PAFVLDAPGGGGKRDV 396
>gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110]
gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110]
Length = 499
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
D G+++++ + G+ H+Y LL + C YCR+CFR+ +VG + + D
Sbjct: 209 DTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIVGKDSDEI--APDFARVA 266
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-- 193
YI ++ V+ +GGDP +LS +L K+L L I H++ +RF +++ P+R
Sbjct: 267 QYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDP 326
Query: 194 --PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
P L + + EAGK I H +H E S +A I L G+ L+QSVLL +NDDP
Sbjct: 327 ALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDP 386
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY-- 309
EILA ++ ++PYYL G SHF++++ G +I + ++SG+ + F
Sbjct: 387 EILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI 446
Query: 310 ---------ILDLPGGYGKVKIDTHNIK 328
+LDL G G+V + H K
Sbjct: 447 MSHYTGKIEVLDL-GADGRVYMRYHQNK 473
>gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
Length = 216
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C V+CR+CFRR +++ + + A+ I + I EV+ +GGDPL L+ +L +
Sbjct: 1 CAVHCRYCFRRHFPYAEETA--AREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ L I H++ LR HSR+P+V P R++ L+ L+ PV IHANH EF +
Sbjct: 59 LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ L + G+ LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF
Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ + + A L ++SG P + ++PG GK
Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGK 213
>gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 386
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 13/295 (4%)
Query: 37 IALTPVIANLINPHNPND----PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV-H 91
+ +TP ANLI D P+ RQ +P + + + E + +H I H
Sbjct: 60 MQITPYYANLIRQAAYTDIVDNPLWRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQH 119
Query: 92 RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y +R++L++++ C YC+FCF R V S+K K + +L YI++ ++ EVI
Sbjct: 120 KYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVI 178
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDP++L+ +L + L +R I+ ++R HSR +P RI L+ L+ +
Sbjct: 179 LSGGDPMMLTDAKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVNAF 238
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+H HP E S+ A+ R+ I+ S LL+G+ND+ E L +L + +KP
Sbjct: 239 -GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKP 297
Query: 269 YYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
YYL+H + G S ++ +I + I+ LK ++S + P Y+ LP GK +
Sbjct: 298 YYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV--LPHAKGKFTV 350
>gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2]
Length = 226
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 2/216 (0%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS+++L
Sbjct: 5 CAVHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLAL 62
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
L+ L +K +QILR HSRVPIV P RI+ +LI LK + + + +H+NH E +
Sbjct: 63 WLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTC 122
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
+ + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF
Sbjct: 123 SKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFD 182
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
L + I + + G P + ++ G K
Sbjct: 183 LESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 218
>gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061]
gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 389
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 13/276 (4%)
Query: 54 DPIARQFIP--QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+P+ RQ +P +E+LN E E+ + + +P+ H+Y +R++L++++ C YC+
Sbjct: 84 NPLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPI--CQHKYDNRVILRMVNACNSYCQ 141
Query: 111 FCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
FCF R V S K + +L YI+ + EVI +GGDPL+L+ +L + L
Sbjct: 142 FCFEALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLA 200
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
+R I+ ++R HSR +P RI L++ LK+ + +H HP+E SEE A+
Sbjct: 201 AIREIREDLLIRVHSRALTFNPYRITDALLEILKKH-RVNSFGVHICHPHELSEEFQHAV 259
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286
+ + I+ S L+GIND+ EIL L + + +KPYYL+H + G+S ++ +
Sbjct: 260 RCIQSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKAS 319
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I + I+ LK ++S + P Y+ LP GK +
Sbjct: 320 INDAIAIMGKLKRRVSNIALPEYV--LPHMKGKFTV 353
>gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771]
Length = 320
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 7/242 (2%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
D G++ ++ + G H+Y LL C YCR+CFR+ +VG + + + + +
Sbjct: 51 DTSGEHENTVVPGFQHKYEQTGLLLATDRCASYCRYCFRKRIVGQESSEI--ANEFAQIV 108
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NP 194
YI ++ V+ +GGDP +L +L +L L H++ +RF +++ P+R +P
Sbjct: 109 EYIGSHLEMTNVLISGGDPFVLRTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDP 168
Query: 195 EL---IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
EL Q + EAGK I H +H E S +A +I L + G+ L+QSVLL +NDDP
Sbjct: 169 ELGALFQRIHEAGKTAVIVTHFDHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDP 228
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YI 310
EILA+ T ++ I PYYL G SHF++ ++ G +I + +++SG+ + F YI
Sbjct: 229 EILASTFATCHQMGIHPYYLFQSRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI 288
Query: 311 LD 312
+
Sbjct: 289 MS 290
>gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii
37]
gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37]
Length = 337
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 3/272 (1%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDP+ +Q +P ++E + DP+ ++N S L G++H+Y R+LL L C + CR+C
Sbjct: 69 NDPLLQQVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYC 127
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR + ++ K + + YI+ ++ EVI +GGDPL+ LQ V+ L +
Sbjct: 128 FRRHF--PYQDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELL 185
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
++ LR HSR+P+V P RI +L ++ V +H NH E + A+++L
Sbjct: 186 PQLRRLRLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQ 245
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
AG+ LL+QSVLLKGIND+ + L +L E I PYYL D G HF L + +
Sbjct: 246 AGVQLLNQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQ 305
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
+ + + G P ++ G K I T
Sbjct: 306 LTQEMSAALPGYLVPRLSREIAGEKNKTLIAT 337
>gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 169
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 2/169 (1%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G +
Sbjct: 3 ERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EIDRP 61
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
S ++ +AA+ YI++ + +++ TGGDPL + L+ +L++LR I HV+I+R +RVP
Sbjct: 62 KSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTRVP 121
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V PQRI L+ LK+ P++I +H NHP E + + A++ LANAG
Sbjct: 122 AVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169
>gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054]
gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia
cenocepacia HI2424]
gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054]
gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424]
Length = 396
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWE 146
H+Y +R++L++++ C YC+FCF R V S+K +S+DT ++AYI++ I E
Sbjct: 129 HKYDNRVILRMVNTCNSYCQFCFEALRTLEVNSEKTN--ASRDTFGESVAYIKQNPAIEE 186
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
VI +GGDPL+LS +L + L LR + ++R HSR +P R+ +L+ L E +
Sbjct: 187 VILSGGDPLMLSDAKLDEHLSALRDVGRDLLIRIHSRSLTFNPYRVTDQLVAML-ERHRV 245
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+H HP E S A+ R+ +A I+ S L+GINDD E L L +
Sbjct: 246 NAFGVHVCHPDELSPAFTDAVKRIRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGV 305
Query: 267 KPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
KPYYL+H + G S ++ +I + +I+ LK ++S + P Y+ LP GK +
Sbjct: 306 KPYYLYHFMPFSPGASVYKASIRDAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTV 360
>gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 385
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 15/276 (5%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDN---NHSPLKGIV-HRYPDRILLKLLHVCPVYCR 110
P+ RQ +P E N++ + D +N NH I H+Y +R++L++ + C YC+
Sbjct: 79 PLWRQVVPYWNE-NVMGDY--DGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQ 135
Query: 111 FCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
FCF + Q GT + +T+ L YI+ I EVI +GGDPL+LS ++L++ L
Sbjct: 136 FCFE-ALRTLQVGTDKKNANTDLFLDSVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLA 194
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
LR I+ ++R HSR +P R+ E + L + K +H HP E S + AI
Sbjct: 195 ALRSIREDLLIRIHSRALSFNPFRVTDEFVAILAKY-KVNAFGVHVCHPLELSVDFERAI 253
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286
S++ A I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +
Sbjct: 254 SKIRIAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKAS 313
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
I + I+ LK ++S + P Y+ LP GK +
Sbjct: 314 ISQAIAIMNRLKRRVSNIALPEYV--LPHAQGKFTV 347
>gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 386
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 26 DEIKEISNH----YSIALTPVIANLINPHN----PNDPIARQFIPQKEELNILPEEREDP 77
DEI + H + +TP ANLI ++P+ RQ +P + + E
Sbjct: 45 DEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPLWRQVVPFWLDDGATGYDGESE 104
Query: 78 IGDNNHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA 133
+ +H I H+Y +R++L++++ C YC+FCF R V S+K K +
Sbjct: 105 NWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQD 163
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+L YI+ + EVI +GGDP++L+ +L + L +R I+ ++R HSR +P RI
Sbjct: 164 SLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRIT 223
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L+ L+ + +H HP E S+ A+ R+ I+ S LL+G+ND+ +
Sbjct: 224 DTLLDILRRHRVNAF-GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEDT 282
Query: 254 LANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L L + +KPYYL+H + G S ++ +I + I+ LK ++S + P Y+
Sbjct: 283 LRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV-- 340
Query: 313 LPGGYGKVKI 322
LP GK +
Sbjct: 341 LPHAKGKFTV 350
>gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
Length = 487
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 37/316 (11%)
Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+I +TP + + I+ +NP +DPI +QFIP + I D+ H L +
Sbjct: 85 AIRITPHVLSRIDWNNPLDDPIRKQFIPLASCI----------IPDHEHLKLDSLEEEKD 134
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIWEVI 148
+YCRFC R VG TV S E Y++ + +++
Sbjct: 135 S-----------LYCRFCTRSYAVGGGTDTVTKRPQKPSLTRWEKVFEYVENCKDLKDIV 183
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NP------ELIQC 199
+GGD L + L ++ + L ++ +++ +RF S+ V P RI +P EL
Sbjct: 184 VSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASKGLAVAPGRICEGDPWTEALIELSNL 243
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ GK V + H NHP E + A + L G+I+ +QSVLLKG+N+DP I+++L++
Sbjct: 244 GRSLGKQVCLHTHINHPREITWVTKTAANYLFKHGVIVRNQSVLLKGVNNDPVIMSDLIQ 303
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ I+PYY++ D+ G R ++E + L+ +SG P +++DLPGG GK
Sbjct: 304 GLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKQLRGTLSGFMMPAFVIDLPGGGGK 363
Query: 320 VKIDTHNIKKVGNGSY 335
+ T + G +Y
Sbjct: 364 RLVSTMESYENGVATY 379
>gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 188
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++
Sbjct: 1 MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L+ L++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + L
Sbjct: 61 PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A L + PYYLH D AG +HF + + + L ++SG P + ++P
Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180
Query: 315 GGYGK 319
G GK
Sbjct: 181 GDTGK 185
>gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
Length = 195
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR HSR+PIV P RI
Sbjct: 1 MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + V + H NH E E AA++ L AG+ LL+QSVLL+G+ND+ + L
Sbjct: 61 TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A+L + + PYYLH D G +HF ++ +E ++I+ L ISG P ++
Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180
Query: 315 GGYGKVKID 323
G K +D
Sbjct: 181 GEPSKTPLD 189
>gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa]
Length = 519
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%)
Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I +TP I + IN +P DPIARQF+P K + LP+ + D + + SP+KG+
Sbjct: 202 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 259
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P R RR E A AYI+ + ++ +++ +G
Sbjct: 260 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 287
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201
GD L ++L + + L + +++ RF S+ V P RI E + L K
Sbjct: 288 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 347
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R
Sbjct: 348 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 407
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ I PYY++ DL H R ++ + A ++ I+G P +++DLPGG GK
Sbjct: 408 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 465
>gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A]
gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 492
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%)
Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
+I +TP I + IN +P DPIARQF+P K + LP+ + D + + SP+KG+
Sbjct: 175 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 232
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P R RR E A AYI+ + ++ +++ +G
Sbjct: 233 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 260
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201
GD L ++L + + L + +++ RF S+ V P RI E + L K
Sbjct: 261 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 320
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R
Sbjct: 321 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 380
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ I PYY++ DL H R ++ + A ++ I+G P +++DLPGG GK
Sbjct: 381 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 438
>gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC
BAA-286]
Length = 444
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+P G ++ P LKGI H+YP+ +L C YC FCFR G +
Sbjct: 109 NPAGQEHNVPSLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 168
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVP 185
K+ + L Y++ ++ +V+FTGGDP++++ L + L H++ +R ++
Sbjct: 169 MKEADLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSL 228
Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
P R + ++I+ +E +GK + I H NHP E S EA+ AI R+ + G
Sbjct: 229 AYWPYRYLTDTDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQ 288
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +QS LLK IND PEI A + R V+L PYY+ +F L +E+ I
Sbjct: 289 IRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRR 348
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
+++SGLC+ + GK+++
Sbjct: 349 AYQQVSGLCRTVRGPSMSDHAGKIQV 374
>gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC
BAA-286]
Length = 441
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+P G ++ P LKGI H+YP+ +L C YC FCFR G +
Sbjct: 106 NPAGQEHNVPYLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 165
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
K+ + Y++ ++ +++FTGGDP+I++ L+ ++ L H++ +R ++
Sbjct: 166 MKEADLLFKYLRLHKEVTDILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSL 225
Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
P R + L + + +GK + + H NHP E S EA+ AI+R+ + G
Sbjct: 226 AYWPYRYLTDKDSDDIIRLFELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQ 285
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +QS LL+ IND PE+ A + R V+L PYY+ +F L +E+ +I
Sbjct: 286 IRTQSPLLRNINDKPELWARMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRR 345
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
++SGLC+ + GK+++
Sbjct: 346 AYRQVSGLCRTVRGPSMSDHAGKIQV 371
>gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM
22836]
Length = 444
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 13/269 (4%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124
LN P +E + LKGI H+YP+ +L C YC FCFR
Sbjct: 106 LNPNPAGQEHNVPSLGEVKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSEL 165
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182
+ K+ + L Y++ ++ +V+FTGGDP++++ L +K L H++ +R +
Sbjct: 166 KFAMKEVDLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGT 225
Query: 183 RVPIVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233
+ P R + ++I+ +E +GK + I H NHP E S +A+ AI R+ N
Sbjct: 226 KSLAYWPYRYLTDSDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNT 285
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G + +QS LLK IND PEI A + R V+L PYY+ +F L +E+ I
Sbjct: 286 GAQIRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNI 345
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
+++SGLC+ + GK+++
Sbjct: 346 FRRAYQQVSGLCRTVRGPSMSDHAGKIQV 374
>gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
Length = 418
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 54/383 (14%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQ 59
+ + TL + + + + +EQ++EIK +S+ Y V+ NLI+ +N PNDPI R
Sbjct: 3 KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62
Query: 60 FIPQKEELNILPEERED---------------------------PIGDNN-------HSP 85
P KE L +PE E P G
Sbjct: 63 NFPHKEML--IPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKK 120
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L+GI H+Y D +L C YC FCFR + + SK+ + L Y+ E Q
Sbjct: 121 LEGIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQ 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
I EV+FTGGDP+I++ + L ++ L + ++ +R ++ P + +
Sbjct: 181 ITEVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLN 240
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
+++ + +AGK + H NHP E + AI +L + G ++ +QS LL+ IN+D +
Sbjct: 241 VLRKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTW 300
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ V+L PYY+ P +F T+E K+ SGL +
Sbjct: 301 TTMWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMS 360
Query: 315 GGYGKVKIDTHNIKKVGNGSYCI 337
+GKV+ I V N SY +
Sbjct: 361 MTHGKVE-----ILGVKNNSYTL 378
>gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1]
gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 462
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 80 DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
D + + L+GI H+Y + +L C YC FCFR K ++S + E AY
Sbjct: 137 DEHGNRLEGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAY 196
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI--- 192
++ ++ +++FTGGDP+++ + L+ L+ L H+Q +R ++ P R
Sbjct: 197 LRHHCEVTDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGA 256
Query: 193 --NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKG 246
ELI L+ EAGK V + H NH E EA AA+ RL AG+++ Q L+
Sbjct: 257 DDADELIALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAH 316
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP++ A + +T V L I PYY+ ++F + + +I +++SGL +
Sbjct: 317 LNDDPDVWARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGR 376
Query: 307 PFYILDLPGGYGKVKI 322
+ GKV+I
Sbjct: 377 TARGPSMSASPGKVEI 392
>gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 202
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%)
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+ L+
Sbjct: 26 EVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPW 85
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P +HANH EF A+ L + G LL+Q+VLL G+ND + LA L
Sbjct: 86 PAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAG 145
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK
Sbjct: 146 VLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGK 199
>gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length = 434
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 50/352 (14%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIAR 58
++ R T + L I +EQI +K ++ Y + V NLI+ N P DPI R
Sbjct: 2 LKYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFR 61
Query: 59 QFIPQKEELNILPEE---------------------RE-------DPIGDN-------NH 83
PQ+E LN PE+ RE +P G ++
Sbjct: 62 LSFPQEEMLN--PEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDN 119
Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
L GI H+Y + +L VC YC +CFR + ++ D L Y++E
Sbjct: 120 EVLHGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEH 179
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE------ 195
++ ++IFTGGDP+++S ++K ++ L I V+ +R ++ P R E
Sbjct: 180 PEVKDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEI 239
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ + +GK + I H +HP E + +A+ AI+R+ + G ++ SQS +++ +NDD +
Sbjct: 240 LSFFEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDAD 299
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
I + + ++L I PYY+ +F + + E +I + +++SGL
Sbjct: 300 IWEAMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGL 351
>gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
Length = 465
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%)
Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL- 99
++ L+ + P +A+ +EELN P + E + N + G+ H+Y + L
Sbjct: 97 IVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQHKYNETALFF 156
Query: 100 -KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
C YC +CFR G +++ E +AY++ ++I +V+ TGGDPL +S
Sbjct: 157 PSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVLITGGDPLTMS 216
Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVY 208
K L K + L + H++ +R ++ P R + +L+ + +GK +
Sbjct: 217 AKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFRMIVRSGKHLA 276
Query: 209 IAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ H NHP E +A AI R+ G ++ +QS +++GINDD +I + L + V L +
Sbjct: 277 LMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSALWKRQVSLGLV 336
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
PYY+ P FR+++ +I + +SG+C+ + GKV++
Sbjct: 337 PYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNPGKVQV 391
>gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens]
Length = 1879
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQ 121
+E LN P ++ + + L G+ H+Y + +L C YC +CFR
Sbjct: 871 RESLNPHPAGQK-ALNAPKKAELTGVQHKYAETVLFFAAAAQTCHAYCTYCFRWAQFIGD 929
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQIL 178
+ KD ++ Y++E ++ +++FTGGDP+I+ + L++ L+ + ++ H++ L
Sbjct: 930 PDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQYLEPFKDPTHLPHIKNL 989
Query: 179 RFHSRVPIVDPQRINP-----ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIA-AIS 228
R +R PQR EL+ L+E G+ + I H H E S + + AI
Sbjct: 990 RIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAHLGHVRELSTDKVKHAIH 1049
Query: 229 RLAN-AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
RL G+I+ SQS +++GINDD ++ A R V L + PYY+ S+F + +
Sbjct: 1050 RLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYYMFIARDTGAQSYFDVPL 1109
Query: 288 EEGQKIVASLKEKISGLCQ 306
Q++ A SGLC+
Sbjct: 1110 VRAQRLYADAIRATSGLCR 1128
>gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 442
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+P G +++ P LKGI H+Y + +L C YC FCFR +
Sbjct: 106 NPAGQDHNVPMLGDIRLKGIQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFA 165
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
K+T+ L Y++ Q+ +V+FTGGDP+ +S L ++ L ++H++ +R S+
Sbjct: 166 MKETDLLLKYLRLHPQVTDVLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKAL 225
Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
P R + L + + GK + H NHP E S A+ AI R+ N G
Sbjct: 226 AYWPYRFISDVDAAEVLRLFEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQ 285
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +QS LL+ IND PEI + R V+L PYY+ +F + +E+ I
Sbjct: 286 IRTQSPLLRHINDSPEIWREMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRK 345
Query: 297 LKEKISGLCQ 306
++SG+C+
Sbjct: 346 AYSQVSGICR 355
>gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004]
gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii
SS-2004]
Length = 244
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+S + EVI +GGDPL+L+ +L + L ++R I+ ++R HSR +P RI LI+ L
Sbjct: 29 QSSVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETL 88
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
K+ + +H HP+E SEE A+ R+ +A I+ S L+GIND+ + L L
Sbjct: 89 KKYRINAF-GVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFID 147
Query: 261 FVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ +KPYYL+H + G+S ++ +I + I++ LK +IS + P Y+L G
Sbjct: 148 LYRMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYVLPHMKGKFT 207
Query: 320 VKIDTH 325
V + TH
Sbjct: 208 VPLFTH 213
>gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 442
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 50/377 (13%)
Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPI 56
M+ R +T Q DL + +++ E++ ++N + V+ LI+ + P+DPI
Sbjct: 1 MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60
Query: 57 ARQFIPQKE---------------------ELNILPEE-RED----PIGDNNHS------ 84
R P +E +L + ++ R+D P G H+
Sbjct: 61 FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120
Query: 85 -PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P+ G+ H+Y +L+ C YC +CFR ++ + Y++
Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP----- 194
++ +V+ TGGDPLI+S L + + L ++HV +R ++ + P R+
Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240
Query: 195 ---ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDD 250
LI+ AGK V I +H +HP E +E A AA++RL +AG ++ +Q+ +++ +ND
Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P+ A + R V L I+PYY +S F + + I + +SGL +
Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360
Query: 311 LDLPGGYGKVKIDTHNI 327
+ GK+ ID +
Sbjct: 361 PVMSATPGKIAIDGETV 377
>gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15]
Length = 454
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 42 VIANLINPHN-PNDPIARQFIPQK---------------------EELNILPEERED--- 76
VI LIN PNDPI + PQK +E+ + +E D
Sbjct: 61 VINELINWDKVPNDPIYQLVFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELN 120
Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
P G + + L G+ H+Y + +L C YC FCFR K
Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSR 183
++S + E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++
Sbjct: 181 MASTEAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTK 240
Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
P R +L L +AGK V I H NH E + E A AI R+ G
Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATG 300
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ +Q L+K +NDD + A L + V+L I PYY+ ++F + + E I
Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIY 360
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
+K+SGL + + G GKV+I
Sbjct: 361 REAMKKVSGLARTARGPSMSAGPGKVEI 388
>gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 594
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 165/350 (47%), Gaps = 32/350 (9%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH--NPNDPIAR-QFIPQKEE 66
+ ++L + ++K I++ +E N+ +TP +L++ ND R Q IP
Sbjct: 206 TLENLVRVSELEKYSIEKARE--NNIPFGITPYYVSLMDNSLDRRNDHAVRAQVIPPVRY 263
Query: 67 LNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
+ E R D +G+++ SP+ + RYP ++K C C +C R +
Sbjct: 264 VEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDV 323
Query: 122 -KGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
VL+SK++ A+ + E I E++ TGGDP ILS++ L +L IKH++ +R
Sbjct: 324 FSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEFSKIKHLERIR 383
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGI 235
+R P+ PQRI E + L + KP + I+ H H YE + + AISRL N+GI
Sbjct: 384 IGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRDAISRLKNSGI 443
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ +Q V I + + +R ++L I+PYYL + T+++R+ I + +
Sbjct: 444 TVYNQQVFT--IENSRRFETSALRKVLKLIGIEPYYLFNTKGKEETTNYRVPI---ARAL 498
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
KE+ L GY + N+ K+G + H+++
Sbjct: 499 QERKEEAR----------LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDVI 538
>gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 455
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 16/256 (6%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N ++G+ H+Y + +L C YC FCFR K ++S + L Y++
Sbjct: 135 NGEVVEGLQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLR 194
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE- 195
E Q+ +++ TGGDP+++ K L + L+ L + HVQ +R ++ P R +
Sbjct: 195 EHPQVTDLLVTGGDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDN 254
Query: 196 -------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANAGIILLSQSVLLKG 246
L+ L ++G+ V I H NH E E IA AI RL G+ + SQ LL
Sbjct: 255 DADELLDLLTRLVKSGRQVAIMAHYNHWREL-ETPIAREAIRRLRETGVEIRSQGPLLAH 313
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDDP + A L +T V+L I PYY+ +F + + I +++SGL +
Sbjct: 314 INDDPAVWARLWKTQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGR 373
Query: 307 PFYILDLPGGYGKVKI 322
+ G GKV+I
Sbjct: 374 TARGPSMSAGPGKVEI 389
>gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus]
Length = 445
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%)
Query: 26 DEIKEISNHYS---IALTPVIANLINPHNPND-----------PIARQFIPQKEELNIL- 70
D++ E H + + +TP + N I P P D P+ R +P + + ++
Sbjct: 50 DDLTEDQEHMATMAMLITPQMLNTIAPETPADSDGYHDAFYADPVRRYMVPVRSDRDLRW 109
Query: 71 ---PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS------- 120
P D + + ++G+ RYP ++L +L+ CP YC C R ++VG
Sbjct: 110 PSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAELVATCPQYCGHCTRMDLVGGSTPSVDK 169
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ T+ + EA L +++ + +V+ +GGD + RL+ L L I V+ +R
Sbjct: 170 QRLTLRPADRQEAILDHLRRTPGVRDVVVSGGDVANVPWPRLESFLLRLLEIDSVRDIRL 229
Query: 181 HSRVPIVDPQR-INPELIQCLKE-----AGKPVYIAI--HANHPYEFSEEAIAAISRLAN 232
S+ + PQ + P+++ L+ A + V++A+ HANH + L +
Sbjct: 230 ASKALVGLPQHWLQPQVVSGLENVAGVAARRGVHLAVHTHANHVQSVTPLVAEGARALLD 289
Query: 233 AGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
AG+ + +Q VL++G+ND L +L E I PYY + D+ G H+R ++ E
Sbjct: 290 AGVRDVRNQGVLMRGVNDSTAALLDLCFALQDEAGILPYYFYMCDMVPGAEHWRTSLAEA 349
Query: 291 QKIVASLKEKISGLCQPFYILDLP 314
Q + ++ + G P + D+P
Sbjct: 350 QDLQHAIMGYLPGYATPRIVCDVP 373
>gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I]
gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 633
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 18/325 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56
Q++H LT + + + +++I +K H + +TP +L N + +
Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294
Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
Q +P + + R+ D +G+ SP++GI RYP ++LK CP C +
Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C R + S + + A+ +I++ I EV+ TGGDPL ++ + + +L+ +
Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
I HV+ LR +R P+ P RI P+L + LK+ +P V + H HP E + E++ A+
Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
+ AG+ + +Q V + EI A + + + PYY + T FR+ I
Sbjct: 475 QTIRQAGMSVYNQQVFTYYNSRKFEI-AKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533
Query: 288 ---EEGQKIVASLKEKISGLCQPFY 309
E+ +K A L+ I +P +
Sbjct: 534 ARVEQERKEEARLQPGIVRTDEPVF 558
>gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
Length = 484
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 23/299 (7%)
Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DP+ R +P ++ + P D + +++ ++G+ HRYP ++L ++L CP YC
Sbjct: 115 DPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTHRYPTKVLAEMLPTCPQYC 174
Query: 110 RFCFRREMVGSQKGTVLSSK------DTEAA-LAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ ++ K D AA L Y+Q Q+ +V+ +GGD + K L
Sbjct: 175 GHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQVRDVVVSGGDVANMPWKNL 234
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214
+ L L I +++ +R ++ + PQ + P++++ + + G + I H N
Sbjct: 235 EGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARVSALARSRGVSLAIHTHVN 294
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
H + A + AG+ + +Q VL++GIND + L +L E I PYY +
Sbjct: 295 HAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLLDLCFALQDEAMITPYYFY 354
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP--GGYGKVKIDTHNIKK 329
D+ + H+RL + E Q + S+ + G P + D+P G ++DT++ K
Sbjct: 355 MCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVPFVGKRWVHQVDTYDRDK 413
>gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
Length = 414
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 38/344 (11%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59
M+ + ++ S + L + KE I+ IK +S + + IA+L++ N +DPI R
Sbjct: 1 MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60
Query: 60 FIPQKE------------------------ELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
P K+ +LN P + + I + N L+G H+Y +
Sbjct: 61 IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120
Query: 96 RILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
IL K C YC FCFR +SK+ E + YI+ I +V+FTGGD
Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180
Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203
PL++S K L+ +K L I H++ +R ++ P R EL+ K ++
Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ + G I+ +QS LL+ IND ++ + + V
Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
L + PYY+ +F L + + +I +SGL +
Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLAR 344
>gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
Length = 433
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 46/350 (13%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
+ + T + Q L + I EQ+ IK ++ Y + +A NLI+ N P+DP+ R
Sbjct: 2 LTFQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFR 61
Query: 59 QFIPQ--------------------------KEELNILPEEREDPIGDN-------NHSP 85
PQ +E I + +P G + P
Sbjct: 62 LSFPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEP 121
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L L VC YC +CFR + +++ + + Y++ +
Sbjct: 122 LHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPE 181
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQ 198
+ +VIFTGGDP+++S + ++K ++ L + ++ +R ++ P R + LI+
Sbjct: 182 VKDVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIR 241
Query: 199 CLKE---AGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+E +GK + I H +HP E EA+ A+ R+ + G ++ SQS +++ +NDD E+
Sbjct: 242 FFEEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVW 301
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ + V+L + PYY+ +F + + E I ++SGL
Sbjct: 302 EEMWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGL 351
>gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 454
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 141/328 (42%), Gaps = 47/328 (14%)
Query: 42 VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76
VI LIN PNDPI + PQK E + L E D
Sbjct: 61 VINELINWDKVPNDPIYQLVFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALN 120
Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
P G + + L G+ H+Y + +L C YC FCFR K
Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLK 180
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
++S D E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++
Sbjct: 181 MASTDAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240
Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
P R EL L + GK V I H NH E + + A AI R+ G
Sbjct: 241 ALTFWPYRFVTDKDADELIELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATG 300
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ +Q L+K +NDD + A L + V+L I PYY+ ++F + + E I
Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIY 360
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
+++SGL + + G GKV+I
Sbjct: 361 REAMKQVSGLARTARGPSMSAGPGKVEI 388
>gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 594
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 37 IALTPVIANLINPHNPND---PIARQFIPQKEELNILPEERE------DPIGDNNHSPLK 87
+TP A+L++ + Q IP + L E R+ D + +N+ SP++
Sbjct: 230 FGITPYYASLMDEKEDRKRDYAVRAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIE 289
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
GI RYP ++LK + CP C +C R E V SQ LS K E A+ +I + +I
Sbjct: 290 GITRRYPMIVILKPILTCPQICVYCQRNWEIEDVYSQTA-ALSQKKLERAIQWIADTPEI 348
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL---IQCLK 201
EV+ TGGDP +LS+ R++ +L L IKH++ +R +R P+ PQRI L I
Sbjct: 349 REVLVTGGDPFLLSNSRIENLLFRLSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFH 408
Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E GK + + H HPYE + A+ A+ ++ G+ + +Q V N A L
Sbjct: 409 EPGKREITVITHFEHPYEITPNAMEAVQKIRRLGMSVKNQMVFTT-FNSRKFEAAVLRHK 467
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285
+ + PYY + T +R+
Sbjct: 468 LSLIGVSPYYTFNTKGKEETEDYRV 492
>gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
Length = 441
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N L G+ H+Y + +L C YC +CFR + +++T+ +AY+Q
Sbjct: 127 NGRKLPGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQ 186
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195
++ +V+ TGGDP+I+ K L+K L+ L I ++ +R ++ PQR +
Sbjct: 187 AHPEVTDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADAD 246
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250
+ + AGK + I H++HP E + A AI R+ G ++ +Q+ L+K +NDD
Sbjct: 247 DALRFFEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDD 306
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P++ A R V+L + PYY+ +F + + Q+I A+ ++SGL +
Sbjct: 307 PDVWAEKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRG 366
Query: 311 LDLPGGYGKVKI 322
+ GKV+I
Sbjct: 367 PSMSAFPGKVRI 378
>gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
Length = 448
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 51/345 (14%)
Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
E+K ++N + + N LI+ N PNDP+ + PQK+ L +R + H+
Sbjct: 41 EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLEPSAYQRMADLMSGKHT 100
Query: 85 ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109
PL G+ H+Y + +L C YC
Sbjct: 101 TNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 160
Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
FCFR + VG K T +S D + Y+ + ++ +++ TGGDP+++ ++L L+
Sbjct: 161 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLAHYLEG 218
Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYE 218
L +H++ +R ++ P R +P+ L+ + GK V I H NHP E
Sbjct: 219 LLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLRLLERLVDGGKHVSIMAHLNHPNE 278
Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E AI RL G+ + Q+ LLK INDDP++ A++ V+L + PYY+
Sbjct: 279 LRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVWASMWEKQVQLGLIPYYMFVERDT 338
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+F + +E +I +++SG+ + + G GKV++
Sbjct: 339 GAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMSAGPGKVEV 383
>gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 456
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 149/301 (49%), Gaps = 22/301 (7%)
Query: 36 SIALTPVIANLINPHN-PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90
S+ + P + N +N + DP+ R +P + E P+ D + + + ++G+
Sbjct: 90 SLLVPPQMLNTMNLEDLWRDPVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLT 149
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA-ALAYIQEKSQ 143
HRYP ++L ++L CP YC C R ++VG+ V + KD A L Y++
Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPT 209
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201
+ +V+ +GGD L ++L+ + +L I +++ +R S+ + PQ + ++Q L
Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDR 269
Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254
E G + + H NH + + A+ +L G + +Q VLL+G+ND P+ L
Sbjct: 270 LAKKAVERGVDLALHTHVNHAQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQAL 329
Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+L T ++ +I PYY + D+ + H+RL++ + Q++ + + G P + D+
Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDV 389
Query: 314 P 314
P
Sbjct: 390 P 390
>gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
Length = 448
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 13/263 (4%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
+ +D + + + L G+ H+Y + +L C YC FCFR + ++
Sbjct: 110 QMKDNVPEVDGVKLTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRE 169
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVD 188
TE + YI+ I +++FTGGDPLI+ K L + L + +++ +R ++
Sbjct: 170 TELLVKYIKVNPHITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYW 229
Query: 189 PQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239
PQR + L + + +AGK + H NH E +EE AI R+ N G + +
Sbjct: 230 PQRFTSDTDADDLLRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRT 289
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QS ++K IND E A + R V+L PYY+ +F + ++ +I +
Sbjct: 290 QSPIMKNINDSAEAWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQ 349
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG+C+ + G GKV++
Sbjct: 350 QVSGVCRTVRGPSMSAGPGKVQV 372
>gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 218
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEA 223
+R I HV+I+RF S++P+ +P RI + EL+ ++ P +Y+ H NHP E +EEA
Sbjct: 1 MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A L +AG+I+++Q+ +LKGINDDPE+LA L+ + PYY AG S F
Sbjct: 61 RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LT+E+ +IV K + SGL + ++ + GK++I
Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI 158
>gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
Length = 465
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DPI IP ++ + P+ D + +++ +G+ HRYP ++L +LL CP YC
Sbjct: 120 DPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 179
Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ + K T EA L Y++ Q+ +V+ +GGD L RL
Sbjct: 180 GHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSGGDVANLPWPRL 239
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHAN 214
+ L L I +++ +R ++ I PQ E + +E G + + HAN
Sbjct: 240 EDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARERGVSLAVHTHAN 299
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANL-MRTFVELRIKPYYLH 272
H + A L AG+ + +Q VLL G+N D L +L R +I PYY +
Sbjct: 300 HANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLLDGAQIMPYYFY 359
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D+ + H+R+++ + Q++ + + G P + D+P
Sbjct: 360 MCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP 401
>gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
Length = 457
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 51/345 (14%)
Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
E+K ++N + + N LI+ N PNDP+ + PQK+ L+ +R + H+
Sbjct: 50 EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLDPSAFQRMADLMSGKHT 109
Query: 85 ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109
PL G+ H+Y + +L C YC
Sbjct: 110 TNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 169
Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
FCFR + VG K T +S D + Y+ + ++ +++ TGGDP+++ ++L+ L+
Sbjct: 170 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLKHYLEG 227
Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHANHPYE 218
L H++ +R ++ P R +P+ L++ L GK V I H NH E
Sbjct: 228 LLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMRLLEKLVRGGKHVSIMAHLNHHNE 287
Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E AI RL G + Q+ LL+ INDDP++ A++ V+L + PYY+
Sbjct: 288 LRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVWADMWEREVQLGMIPYYMFVERDT 347
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+F + +E ++ +++SG+ + + G GKV++
Sbjct: 348 GAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMSAGPGKVEV 392
>gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622]
gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 442
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N P+ G+ H+Y + +L+ K C YC +CFR +S++ E + YI+
Sbjct: 132 NEEPVPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIR 191
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195
++ V+FTGGDP+I++ L K ++ L I+H++ +R ++ PQR +
Sbjct: 192 AHPEVTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDAD 251
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
L + + +GK + H +HP E E + A+ R+ G ++ +Q+ L++ IND
Sbjct: 252 DILRLFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDT 311
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P ++ RT + + PYY+ +F + + E I + + +SGL +
Sbjct: 312 PGTWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRG 371
Query: 311 LDLPGGYGKVKID 323
+ GKV +D
Sbjct: 372 PSMSATPGKVCVD 384
>gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 440
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYI 138
N L GI H+Y + +L C YC FCFR + V + ++S++ + + Y+
Sbjct: 117 NGESLPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYL 176
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--- 195
+ + ++ +V+ TGGDPL++ L + ++ L + ++ +R +R P R +
Sbjct: 177 KSRPEVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDA 236
Query: 196 -----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIND 249
L + ++EAGK + H NHP E E + A+ R+ G ++ +QS LL+ IND
Sbjct: 237 EELLTLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHIND 296
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ A + R V++ PYY+ +F +T+++ ++ + ISG+C+
Sbjct: 297 SEALWAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICR 353
>gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
Length = 456
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 39 LTPVIANLINPHNPN----DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90
+TP + N ++ DP+ R +P ++ + P D + + + ++G+
Sbjct: 88 VTPQMLNTMDTSTTEAFYADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLT 147
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQ 143
HRYP ++L +LL CP YC C R ++VG+ V + T EA L Y++
Sbjct: 148 HRYPTKVLAELLSTCPQYCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPT 207
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPE- 195
+ +V+ +GGD L RL+ + L I ++ +R ++ + PQ R E
Sbjct: 208 VRDVVVSGGDVANLPWPRLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMER 267
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254
L + G + + H N + A L AG+ + +Q VLL G+ND P L
Sbjct: 268 LAAKARRRGVALAVHTHVNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAAL 327
Query: 255 ANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+L + E +I PYYL+ D+ G+ H+RL + Q++ ++ + G P + D+
Sbjct: 328 LDLSFALLDEAQIMPYYLYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDV 387
Query: 314 P 314
P
Sbjct: 388 P 388
>gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718]
gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718]
Length = 452
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 13/252 (5%)
Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
PL G H+Y + +L VC YC FCFR K +S + Y+
Sbjct: 137 EPLPGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGH 196
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE---- 195
+ +++ TGGDP+++ L+ L+ + ++HVQ +R ++ PQR +
Sbjct: 197 KDVTDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAH 256
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
L++ L +AGK V + H NH E + A+ R+ AG+++ +Q+ +++ INDD
Sbjct: 257 ELLALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDD 316
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P + A + RT V + I PYY+ +F + +E +I +++SGL +
Sbjct: 317 PAVWAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRG 376
Query: 311 LDLPGGYGKVKI 322
+ G GKV+I
Sbjct: 377 PSMSAGPGKVEI 388
>gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
Length = 453
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 11/253 (4%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ P+ G+ H+YP+ +L K C YC +CFR + ++S + + +AY++
Sbjct: 131 DDEPMPGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLR 190
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195
+ ++ V+ TGGDP+I+ L++ ++ L ++ ++ +R ++ PQR +P+
Sbjct: 191 QHPEVTGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDAD 250
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
L + + +GK + H +HP E + + A+ R+ + G ++ +Q+ L++ IND
Sbjct: 251 DTLRLFEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDS 310
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
E A + RT V L + PYY+ +F + + + +I +SGL +
Sbjct: 311 SETWATMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRG 370
Query: 311 LDLPGGYGKVKID 323
+ GKV +D
Sbjct: 371 PSMSATPGKVCVD 383
>gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 219
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR
Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELI 197
IKHV+ LR HSR+PIV P RI EL+
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELV 210
>gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
Length = 461
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 12/293 (4%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL-- 99
+A L+ PN I + LN P + D + P+ G+ H+YP+ +L
Sbjct: 85 LAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGEDPMPGMQHKYPETVLFFP 144
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
K C YC +CFR + +S D + + Y+++ ++ V+FTGGDP+I+S
Sbjct: 145 KQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHPRVTSVLFTGGDPMIMSE 204
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAI 211
L++ L+ L ++ ++ +R ++ PQR +P+ L+ +AGK +
Sbjct: 205 SVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTLRLFASVVDAGKNLAFMA 264
Query: 212 HANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H +HP E S A AA++ + G ++ +Q+ L++ INDDP +++ R + + + PYY
Sbjct: 265 HFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPATWSSMWRRQLTMGMVPYY 324
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ +F + + +I +SGLC+ + GKV +D
Sbjct: 325 MFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSMSATPGKVCVD 377
>gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 456
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 13/250 (5%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L+G+ H+Y + +L VC YC FCFR K +S + E AY+++ +
Sbjct: 139 LEGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHRE 198
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
+ +++ TGGDP+++ ++L++ L L ++HVQ +R ++ P R +
Sbjct: 199 VSDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDL 258
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L +G+ V + H NHP E A AI R+ + G+ + +Q LL IND E
Sbjct: 259 LRLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSE 318
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A L R V L I PYY+ +F + + +I +++SGL +
Sbjct: 319 AWAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPS 378
Query: 313 LPGGYGKVKI 322
+ G GKV++
Sbjct: 379 MSAGPGKVEV 388
>gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 454
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N P+ G+ H+Y + +L K C YC +CFR +S + + + Y++
Sbjct: 132 NEEPIPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVR 191
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195
++ V+FTGGDP+I+ + K ++ L I+H++ +R ++ PQR +P+
Sbjct: 192 SHPEVTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDAD 251
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250
L + + +GK + H +HP E E A A+ R+ G ++ +Q+ L++ INDD
Sbjct: 252 DTLRLFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDD 311
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ ++ RT + + PYY+ +F + + E +I + +SGL +
Sbjct: 312 SAVWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRG 371
Query: 311 LDLPGGYGKVKID 323
+ GKV +D
Sbjct: 372 PSMSATPGKVCVD 384
>gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
Length = 475
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 21/282 (7%)
Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DPI R +P ++ + P D + +++ +G+ HRYP ++L +LL CP YC
Sbjct: 110 DPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 169
Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ T+ K +A + Y+Q + +V+ +GGD + K L
Sbjct: 170 GHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGGDVANVPWKNL 229
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214
+ + L I+ ++ +R ++ + PQ + +++ + +E G + I H N
Sbjct: 230 ENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERGVNLAIHTHVN 289
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
H + A + +AG+ + +Q VL+ G+N+ PE L +L E I PYY +
Sbjct: 290 HVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQGEANILPYYFY 349
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D+ + H+R ++ E Q + ++ + G P I D+P
Sbjct: 350 MCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP 391
>gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4]
gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4]
Length = 446
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 49/329 (14%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKE--------------------------------ELN 68
VI LI+ N P+DPI + IPQ++ ELN
Sbjct: 63 VINELIDWGNVPDDPIFQLTIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELN 122
Query: 69 ILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
P + ED I N ++G+ H+Y + +L VC YC FCFR K
Sbjct: 123 PHPAGQMEDNIPTLNGERVEGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELK 182
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSR 183
+++K+T AY++ ++ +V+ TGGDPL++ + L+ L+ L HV+ +R ++
Sbjct: 183 IAAKETHQLQAYLRAHPEVTDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTK 242
Query: 184 VPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANA 233
PQR L + ++ AGK + + H NH E E AIA AI R+
Sbjct: 243 SLTFWPQRFVTDDDADDLLALFEEIQGAGKHLALMAHYNHWQEL-EPAIAREAIRRVRAT 301
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G + SQ LL INDD I A L RT V L I PYY+ ++F + + + +I
Sbjct: 302 GAQIRSQGPLLAHINDDANIWARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQI 361
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
+K+SG+ + + GKV+I
Sbjct: 362 YRDAIQKVSGIGRTARGPSMSAHPGKVEI 390
>gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM
44728]
gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length = 432
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 11/249 (4%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ H+YP+ +L + C YC +CFR + ++S D +A + YI+ +
Sbjct: 131 IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAHPE 190
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
I V+ TGGD +I+ L++ ++ L ++ ++ +R ++ PQR +P+ L+
Sbjct: 191 ITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDTLR 250
Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
E+GK + H +H E + + A+ R+ + G ++ +Q+ L+K INDDP++
Sbjct: 251 LFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQVW 310
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+++ R + + PYY+ +F + + I ++SGLC+ +
Sbjct: 311 SDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPSMS 370
Query: 315 GGYGKVKID 323
GKV +D
Sbjct: 371 ADPGKVAVD 379
>gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
Length = 594
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 37/355 (10%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNPND---PIARQFIPQ 63
L + QDL + + + +I IK+ N +TP +L++ + + I Q IP
Sbjct: 204 LETLQDLLD---LSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAIRAQVIPP 260
Query: 64 KEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
++ E R D +G+N+ SP+ + RYP ++K C C +C R +
Sbjct: 261 TRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQI 320
Query: 119 GS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
K + + A+ + + I EV+ TGGDP +L + L +L IKHV+
Sbjct: 321 KDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEFSQIKHVE 380
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLAN 232
+R +R+P+V PQRI ++ L + +P + ++ H H YE +++ A+S+L N
Sbjct: 381 RIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQEAVSKLKN 440
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
G+ + +Q V + + + +R ++L I PYYL + T +R+
Sbjct: 441 KGMSVYNQQVF--TVENSRRFETSALRKVLKLIGIDPYYLFNTKGKDETIDYRVP----- 493
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG--NGSYCITDHHNIV 344
I +L+E+ L GY + N+ K+G N +YC DH I+
Sbjct: 494 -IARALQERSEE-------ARLLPGYCRTDCTVFNVPKLGKNNLNYC-QDHDLIM 539
>gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
Length = 456
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 21/282 (7%)
Query: 54 DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DPI R +P + + + P D + + ++G+ HRYP ++L +++ CP YC
Sbjct: 110 DPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAEMISTCPQYC 169
Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ TV K T +A +AY+++ + +V+ +GGD + +L
Sbjct: 170 GHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGDVANVPWPQL 229
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAG-----KPVYIAIHA--N 214
+ L L I V+ +R ++ PQ + P++++ L+ + V +AIH N
Sbjct: 230 ESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGVNLAIHTHVN 289
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
H + A N G+ + +Q VL++G+N P L +L E I PYY +
Sbjct: 290 HAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGEANILPYYFY 349
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D+ H+R+++ E Q++ S+ + G P + D+P
Sbjct: 350 MCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP 391
>gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces hygroscopicus ATCC 53653]
gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces himastatinicus ATCC 53653]
Length = 362
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ---EKS 142
L+G+ Y +L++ +C +CR+C R G T LS +D E Y E
Sbjct: 66 LRGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQ 121
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ EV+ TGGDPLIL R++ +L L + V+I+R +RVP+ DP+RI+ + L+
Sbjct: 122 DVREVLVTGGDPLILI-DRIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALR 180
Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
V +A H NH E E A + L AG + Q+VLL+G+ND+ + L L
Sbjct: 181 RRSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDE 240
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK--ISGLCQPFYIL 311
+ I+ +YL H G H R ++ EG ++ L SG +P + L
Sbjct: 241 LRHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFTL 293
>gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2]
gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2]
Length = 462
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 44/325 (13%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEEL---------------------NILPEERED--- 76
VI LIN N PNDPI + PQK L + E RE
Sbjct: 75 VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNP 134
Query: 77 -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
P G H+ ++GI H+Y + +L VC YC FCFR +
Sbjct: 135 HPAGQMEHNIPEVDGEKIEGIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++K+ YIQ +I +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+
Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254
Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
PQR+ +L+ +E +GK + + H NH E A A+ R+ G ++
Sbjct: 255 FWPQRVVSDADAKDLLHLFEEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVI 314
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q LL IND+ + A L +T VEL I PYY+ +F + + + I
Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDA 374
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
+++SG+ + + GKV+I
Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399
>gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
Length = 433
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 48/350 (13%)
Query: 3 LRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
L++++ T+A +L + EQI IK ++ Y + +A NLI+ P+DP+ R
Sbjct: 2 LKYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFR 61
Query: 59 QFIPQK-----EELN---------------------ILPEEREDPIGDNN-HSP------ 85
PQ +E N I+ + +P G ++P
Sbjct: 62 LSFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIA 121
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L VC YC +CFR ++ D ++Y++E +
Sbjct: 122 LHGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPE 181
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+ ++IFTGGDP+++S + L+K ++ L I ++ +R ++ P R +
Sbjct: 182 VKDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILR 241
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + AGK + I H +HP E A+ AI+R+ + G ++ SQS +++ IND+ +
Sbjct: 242 LFEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTW 301
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ + + L I PYY+ +F + + E I + K+SGL
Sbjct: 302 EAMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGL 351
>gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
Length = 463
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 44/325 (13%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN---------------------ILPEERED--- 76
VI LIN N PNDPI + PQK L + E RE
Sbjct: 75 VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNP 134
Query: 77 -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
P G H+ + G+ H+Y + +L VC YC FCFR +
Sbjct: 135 HPAGQMEHNMPEVDGEKIDGVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++K+ YIQ +I +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+
Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254
Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
PQR+ +L+ +E +GK + + H NH E + A A+ R+ G ++
Sbjct: 255 FWPQRVVSDADAQDLLDLFEEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVI 314
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q LL IND+ + A L +T VEL I PYY+ +F + + + +I
Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDA 374
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
+++SG+ + + GKV+I
Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399
>gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 594
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 22/276 (7%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
D +G+ + SP+ + RYP ++K C C +C R + K + + E
Sbjct: 278 DFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDVFSKNALAKKESVEN 337
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ + + I EV+ TGGDP ILS + L +L IKH++ +R +R P+V PQRI
Sbjct: 338 AIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEFSEIKHLERIRIGTRTPVVLPQRIT 397
Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
E + L +P V ++ H H YE +++ A+S+L N GI + +Q V + +
Sbjct: 398 DEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKDAVSKLKNNGIYVYNQQVFT--VEN 455
Query: 250 DPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
+ +R ++L I+PYYL + T ++R+ I + + KE+
Sbjct: 456 SRRFETSALRKALKLVGIEPYYLFNTKGKEETVNYRVPI---ARALQERKEEAR------ 506
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
L GY + N+ K+G + H+++
Sbjct: 507 ----LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDLI 538
>gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454]
gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI
454]
Length = 459
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
PI D + G+ H+Y + +L C YC FCFR +G +K +
Sbjct: 121 PILDGKR--MHGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNEL 178
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192
+AY++ +++ +V+ TGGDPLI++ + L ++ L + H+Q +R ++ PQR
Sbjct: 179 VAYLRRHTEVTDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRF 238
Query: 193 NPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243
+ L + + AGK + + H NHP E + A A+ R+ ++G L QS L
Sbjct: 239 VTDKDADDLLWLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPL 298
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
++ INDD + A L T V L PYY+ +F+L + + +I + + +SG
Sbjct: 299 IRHINDDAKAWAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSG 358
Query: 304 LCQPFYILDLPGGYGKVKID 323
L + + GKV +D
Sbjct: 359 LSRTVRGPSMSAFPGKVVVD 378
>gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 174
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%)
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L ++ L I HV+ LR HSR+PIV P RI L + + V + H NH E
Sbjct: 7 LDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDG 66
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
E AA++ L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +
Sbjct: 67 EFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAA 126
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HF ++ +E ++I+ L ISG P ++ G K +D
Sbjct: 127 HFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLD 168
>gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T]
gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 484
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 22/307 (7%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKG 88
S HY IA LI D + + LN P ++ P+ D + + G
Sbjct: 116 SEHYE-----RIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPL-DEHGKRIDG 169
Query: 89 IVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ H+Y + +L C YC FCFR K ++S + Y++ +++ +
Sbjct: 170 LQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHTEVTD 229
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE-------L 196
++ TGGDP+++ + L++ L+ L H+Q +R S+ P R + E L
Sbjct: 230 LLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADDLMRL 289
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILA 255
++ L EAGK V + H NH E +A AAI R+ G ++ +Q L+ INDDP A
Sbjct: 290 LRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDPAAWA 349
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L +T V L + PYY+ +F + + +I +++SGL + +
Sbjct: 350 RLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGPSMSA 409
Query: 316 GYGKVKI 322
GKV+I
Sbjct: 410 SPGKVEI 416
>gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893]
gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893]
Length = 454
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 42 VIANLINPHN-PNDPIARQFIPQ---------------------KEELNILPEERED--- 76
VI LI+ + PNDP+ + PQ K+E+ + +E D
Sbjct: 61 VINELIDWNKVPNDPLYQLVFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELN 120
Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
P G + N L G+ H+Y + +L C YC FCFR K
Sbjct: 121 PHPAGQMEMNMPELNGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
++S + E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++
Sbjct: 181 MASTEAEKLHGYLQEHTEVSDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240
Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
P R +L L +AGK V I H NH E + + A AI RL G
Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATG 300
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ +Q L+K +ND+ + A L V+L I PYY+ ++F + + E I
Sbjct: 301 AEIRAQGPLIKHVNDNADDWAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIY 360
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
+++SGL + + G GKV++
Sbjct: 361 REAIKQVSGLARTARGPSMSAGPGKVEV 388
>gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
Length = 469
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 29/308 (9%)
Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
S+ + P + N + PH P DPI R IP ++ + P D + +++
Sbjct: 97 SMLVPPQMINTMVPHAPPTTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
+G+ HRYP ++L +LL CP YC C R ++VG+ V K T +A +AY
Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAY 216
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++
Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDV 276
Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIN 248
++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N
Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336
Query: 249 -DDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
P++L L R F + +I PYY + D+ H+R+ + Q++ + + G
Sbjct: 337 ATAPDLLGPLFRPFRRKKKILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYAT 396
Query: 307 PFYILDLP 314
P + D+P
Sbjct: 397 PRIVCDVP 404
>gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
Length = 468
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 33/312 (10%)
Query: 36 SIALTPVIANLINPH----NPN--------DPIARQFIP----QKEELNILPEEREDPIG 79
S+ + P + N + PH P DP+ IP ++ + P D +
Sbjct: 92 SMLVPPQMMNTMVPHEVPAGPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLH 151
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA------ 133
+++ +G+ HRYP ++L +LL CP YC C R ++VG+ T+ K
Sbjct: 152 EHDMWVAEGLTHRYPTKVLAELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLG 211
Query: 134 -ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L Y++ Q+ +V+ +GGD L RL+ L L I++++ +R ++ + PQ
Sbjct: 212 DMLDYLRRTPQVRDVVVSGGDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHW 271
Query: 193 NPELIQC--------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVL 243
E ++ + G + I HANH + A + + AG+ + +Q VL
Sbjct: 272 LQEDVRAGMARVAGTARSRGVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVL 331
Query: 244 LKGINDDPEILANL-MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
L G+N P+ L +L R +I PYY + D+ + H+R+++ + Q++ + +
Sbjct: 332 LNGVNAGPDALLDLCFRLLDGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLP 391
Query: 303 GLCQPFYILDLP 314
G P + D+P
Sbjct: 392 GFATPRIVCDVP 403
>gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1]
gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 456
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 22/301 (7%)
Query: 36 SIALTPVIANLINPHN-PNDPIARQFIPQ-KEELNILP---EEREDPIGDNNHSPLKGIV 90
S+ L P + N +N + DP+ R +P + L P D + + ++G+
Sbjct: 90 SVLLPPQMLNTMNLEDLWGDPVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLT 149
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALAYIQEKSQ 143
HRYP ++L ++L CP YC C R ++VG+ + ++ + E L Y++
Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPS 209
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201
+ +V+ +GGD L ++L+ + +L I +++ +R S+ + PQ + ++Q L
Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDR 269
Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254
E G + + H NH + + A+ +L + G + +Q VLL+G+ND L
Sbjct: 270 LAKKAVERGVDLALHTHVNHARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPAL 329
Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+L T ++ +I PYY + D+ + H+RL++ + Q + + + G P + D+
Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDV 389
Query: 314 P 314
P
Sbjct: 390 P 390
>gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 468
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 13/255 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ PL G+ H+Y D +L C YC +CFR +S+ E+ +AY++
Sbjct: 126 DGQPLSGMQHKYRDTVLFFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLK 185
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE-- 195
E ++ V+FTGGDPL++ L++ ++ L ++H+ +R ++ P P R E
Sbjct: 186 EHPEVSNVLFTGGDPLVMRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPD 245
Query: 196 ------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248
L ++ AG+ + I H + P E A AA+ R+ + G I+ Q+ L++ +N
Sbjct: 246 SDDLLRLFDQVRAAGRHMAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVN 305
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD + A+L R V L PYY+ +F + + +I ++SGL +
Sbjct: 306 DDADTWADLWRLQVRLGAVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTV 365
Query: 309 YILDLPGGYGKVKID 323
+ GKV ID
Sbjct: 366 RGPSMSATPGKVIID 380
>gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 485
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 15/267 (5%)
Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ L+G+ H+Y + L K C YC FCFR ++D E AY++ +
Sbjct: 155 ASLEGVQHKYDETALFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTR 214
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR--INPE-- 195
I +V+ TGGDP ++S +RL L+ L HV +R ++ PQR + E
Sbjct: 215 RDITDVLLTGGDPFVMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAE 274
Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
L+ + ++GK V + H NH E + E + A+ L +G ++ +QS +L+ +NDD
Sbjct: 275 ELNRLLVRVADSGKQVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDD 334
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ R V + + PYY+ +FR++++ I + +SG+C+
Sbjct: 335 VAVWRRNWRDQVAMGMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARG 394
Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCI 337
+ G GK+ + +GN Y +
Sbjct: 395 PVMSAGPGKIHVLGR--LAIGNDDYFV 419
>gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380]
gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 442
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L +L C YC FCFR ++ + T Y++ S+
Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
+ +++ TGGDPL++ L + L+ L H+Q +R ++ P R +
Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L + GK + + H NH E +E A AI R+ G + +QS ++ +NDDP+
Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ L +T V L + PYYL +F + +E +I +K+SGL +
Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGN 332
+ G GKV+I + +VG
Sbjct: 361 MSAGPGKVEI--QGVAEVGQ 378
>gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
Length = 260
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ Q + E + P DP+ D + + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFRR KG + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
I H++ LR HSR+P+V P RI L Q L+++ + +H NH E +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDD 234
>gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
Length = 466
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 82 NHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ P GI H+Y +L H C YC FCFR +S + AY++
Sbjct: 141 DGEPCPGIQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLR 200
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI----- 192
++ +++ TGGDP+++S RL++ L L ++HV +R ++ P R
Sbjct: 201 AHGEVTDLLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPD 260
Query: 193 NPELIQCLK---EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248
PEL+ L+ +AG+ V + H NH E S E A A++ L G+++ SQ +L+ IN
Sbjct: 261 TPELLALLRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHIN 320
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD E+ V L I PYY+ +F L + I + +SGL +
Sbjct: 321 DDAEVWRRNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSA 380
Query: 309 YILDLPGGYGKVKI 322
+ G GKV++
Sbjct: 381 RGPSMSAGPGKVEV 394
>gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
Length = 433
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 47/329 (14%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN----------ILPEERE--------------- 75
++ LI+ N P+DPI R P K+ L IL + E
Sbjct: 50 ILDELIDWGNIPDDPIFRLTFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMN 109
Query: 76 -DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
+P G H+ P+ G+ H+Y + +L C YC FCFR
Sbjct: 110 PNPAGQMTHNVPRMNGVPINGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLR 169
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
++ +E + Y++E ++ +V+ TGGDPL+++ + L + ++ L ++H++ +R ++
Sbjct: 170 FEARSSEPLVQYLKEHKEVTDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTK 229
Query: 184 VPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
PQR + L + + GK + + H NHP E + A A+ R+ G
Sbjct: 230 SISYWPQRFVTDKDADDLLHLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTG 289
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ + QS ++K IND+P+ +L T V+L PYY+ +++F + + +I
Sbjct: 290 VTVRMQSPIIKHINDNPQAWVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIF 349
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ +SGL + + GK+ +D
Sbjct: 350 QKAYQSVSGLARTVRGPSMSTFPGKIMVD 378
>gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
Length = 432
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 11/248 (4%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC +CFR + S + + Y++ +
Sbjct: 129 LDGLQHKYAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPE 188
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
+ +V+ TGGDP+++ + L + L+ L ++ ++ +R S+ P R +P+ + L+
Sbjct: 189 VTDVLVTGGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLR 248
Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
AGK + H +HP E E + AAI L G ++ +Q+ L++ +NDD ++
Sbjct: 249 LFERVAAAGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVW 308
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A R V L + PYY+ +F + + E Q+I A ++SGL + +
Sbjct: 309 AEKWRREVRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMS 368
Query: 315 GGYGKVKI 322
GKV++
Sbjct: 369 AFPGKVRV 376
>gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
Length = 589
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIARQFI 61
K L +DL + I +E + + K I N+ A+TP +L + P+ + PI RQ I
Sbjct: 200 KGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYKYDLPIRRQVI 259
Query: 62 PQKEELNILP--EERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P + +N++ E RE D +G+ + +P + I RY ++K CP C +C R M
Sbjct: 260 PPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQICVYCQRNWM 319
Query: 118 VGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ D E AL + +E + E++ TGGDPL LS ++K+++ ++ HV
Sbjct: 320 IKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIVERIKNFDHVI 379
Query: 177 ILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+RF +R + P RI L+ L K V ++ HA YE + E A+ L + I
Sbjct: 380 GVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKRAVELLGSKNI 439
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
+ +Q V + ++ E +A L ++ I PYY +P
Sbjct: 440 RVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYP 477
>gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM
2661]
gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634
gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 620
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%)
Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
K + N LTP +L + NP + + RQ IP + + + E +ED +G
Sbjct: 253 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138
+++ SP+ + RY ++K CP C +C R MV + E AL +
Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWF 372
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E + E++ TGGDP LS K ++K+L + + HV +RF +R + P RI EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAE 432
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L K + I+ H YE + E A+ +L I + +Q V + ++ E +A L
Sbjct: 433 LLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LR 491
Query: 259 RTFVELRIKPYYLHHP 274
++ I PYY +P
Sbjct: 492 IALKKVGIIPYYTFYP 507
>gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola]
gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola]
Length = 144
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%)
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+
Sbjct: 1 IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L +
Sbjct: 61 QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120
Query: 300 KISGLCQPFYILD 312
ISG P + D
Sbjct: 121 MISGFLVPRLVFD 133
>gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
Length = 174
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%)
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L ++ L I H++ LR HSR+P+V P R+ L Q L+++ + +H NH E +
Sbjct: 7 LDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNHANEMDD 66
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
A S+L A + LL+Q VLL+G+ND E+LA+L R + + PYYLH D G +
Sbjct: 67 ALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLDKVQGAA 126
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HF + E ++I+ +L +SG P ++ G K +D
Sbjct: 127 HFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLD 168
>gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 441
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 48/368 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQF 60
R TL++ +++ +EQ ++I + + + VI LIN N PNDP+ R
Sbjct: 14 FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73
Query: 61 IPQKE--------------------------------ELNILPEEREDP-IGDNNHSPLK 87
P K+ LN P + D + + N L+
Sbjct: 74 FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133
Query: 88 GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C +C FCFR K +S++ E ++Y+QE ++
Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP+ +S L++ ++ + I+ ++ +R ++ PQR +
Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + K + I H NHP E + + + AI + G + +QS L+ INDDP I
Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ R V L PYY+ +F I + +I + +SGL + +
Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373
Query: 315 GGYGKVKI 322
GK+ +
Sbjct: 374 TDPGKINV 381
>gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599]
gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 421
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 9/240 (3%)
Query: 74 REDPIGDNNH--SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKD 130
R DP G+ ++ + H+Y +LL + C C+FC++ E+ G
Sbjct: 83 RFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEIRHEDIGYTNIMDK 142
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP 189
E A+ Y++ I V+FTGGDP L K++ TL +K ++++RF ++ DP
Sbjct: 143 AERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIRLVRFATKALAYDP 202
Query: 190 QR-INPELI----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
R ++ EL+ Q + GK V + NHP E S+ +I A L + G+ + Q ++
Sbjct: 203 ARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALLSVGVQIRGQPAII 262
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L +L R F++ RI YYL G + + ++E + VA K + GL
Sbjct: 263 RGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAFRNVAESKRNLGGL 322
>gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
Length = 407
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 77 PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P G +H+ L+G+ H+Y + +L + C YC FCFR +G
Sbjct: 75 PAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFRWAQFVGLEGMKFE 134
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
S++ Y++ + +V+FTGGDP+++ + L++ ++ L + +H+ + R ++
Sbjct: 135 SREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDFEHINV-RIGTKSV 193
Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGII 236
PQR EL+ +E +G+ + + H NHP E E A A++R+ + G
Sbjct: 194 SYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVAQRAVARIRSTGAQ 253
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ QS L++ IND PE A L RT V+L PYY+ ++F + + +I
Sbjct: 254 IRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYFEVPLARAWEIFGD 313
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
++SGL + + GKV +D + KV
Sbjct: 314 AYRQVSGLARTVRGPSMSTMPGKVLVD--GVAKVAG 347
>gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
Length = 620
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
K + N +TP +L + NP + + RQ IP + + + E +ED +G
Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138
+++ SP+ + RY ++K CP C +C R MV + E AL +
Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWF 372
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E + E++ TGGDP LS K ++K+L + + HV +RF +R + P RI EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 432
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L K V I+ H + YE + E A+ +L I + +Q V + ++ E +A L
Sbjct: 433 LLGSFEKSVMISTHVENCYEITPEVKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LR 491
Query: 259 RTFVELRIKPYYLHHP 274
++ I PYY +P
Sbjct: 492 IALKKVGIIPYYTFYP 507
>gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
Length = 483
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 21/282 (7%)
Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DPI R +P ++ + P D + +++ +G+ HRYP ++L +LL CP YC
Sbjct: 111 DPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTKVLAELLPTCPQYC 170
Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ V K +A LAY++ + +V+ +GGD + K L
Sbjct: 171 GHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVVSGGDVANMPWKNL 230
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLKEAGKPVYIAIHAN 214
+ L L I +++ +R ++ + PQ + + + G + I H N
Sbjct: 231 ESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATARARGVSLAIHTHVN 290
Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLH 272
+ + A + AG+ + +Q VL++GIND E L +L + I PYY +
Sbjct: 291 NAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFALADGASITPYYFY 350
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D+ H+RL++ E Q++ S+ + G P + D+P
Sbjct: 351 MCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP 392
>gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei]
Length = 403
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 22/292 (7%)
Query: 53 NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+DP+ R +P + + P D + + + ++G+ HRYP ++L +LL CP Y
Sbjct: 56 DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115
Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C R ++VG+ V S+ + LA+++ I +V+ +GGD + R
Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIHA 213
L++ L L I ++ +R S+ I PQ N + + + G + + HA
Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
N + + A L +AG+ + +Q VL++G+ND L +L + I PYY
Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ D+ H+R+ + Q I + + G P + D+P GK +D
Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 346
>gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
Length = 621
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%)
Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
K + N LTP +L + NP + + RQ IP + + + E +ED +G
Sbjct: 254 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMG 313
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138
+++ SP+ I RY ++K CP C +C R MV + E AL +
Sbjct: 314 EHDTSPIDLITRRYVTIAIVKPYESCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWF 373
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E + E++ TGGDP LS K ++++L + + HV +RF +R + P RI EL +
Sbjct: 374 AEHDSMIEILITGGDPFSLSDKAIERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 433
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L K + I+ H YE + E A+ +L I + +Q V + ++ E +A L
Sbjct: 434 LLGSFEKRIMISTHVESCYEITPEVKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LR 492
Query: 259 RTFVELRIKPYYLHHP 274
++ I PYY +P
Sbjct: 493 IALKKVGIIPYYTFYP 508
>gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2]
gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 425
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124
+N P +++ + N L G H+Y + IL K C YC FCFR
Sbjct: 101 MNPHPADQKSNVPTINDKELTGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNEL 160
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182
+ K+ + + YI+ I ++IFTGGDPLI+S K L+ ++ + I H+Q +RF +
Sbjct: 161 KFAMKEVDLLIEYIKAHPTITDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGT 220
Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANA 233
+ P R + L + + E G + H NH E ++E A+ R+
Sbjct: 221 KTLGFWPYRFLTDSDADDLLKLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQT 280
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G I+ +Q+ +L+ IND E+ + R V + + PYY+ +F + + E KI
Sbjct: 281 GAIIRTQAPILRHINDSSEVWEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKI 340
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
+SGL + + GK+ +
Sbjct: 341 FKDAISNVSGLARTVRGPSMSAAPGKIAV 369
>gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2]
gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
Length = 336
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 26/248 (10%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q +L +AYI E ++I +V+ TG D L+L +L +++ LR I+H+ +R
Sbjct: 75 QSMVLLPVSQAAEGIAYIAEHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRL 133
Query: 181 HSRVPIVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
SR+P+ +P RI + L++ L + P +Y+ NHP E + EA A + L AG+
Sbjct: 134 DSRMPVHNPMRIYEDHALLKMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGV 193
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY--LHHPDLAAGTSHFRLT-----IE 288
++L+Q+ ++KG+N+DP +L L+ + + PY ++ P+ + S L ++
Sbjct: 194 VVLNQTPIVKGVNNDPLLLGKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSIVQ 253
Query: 289 EGQKIVASLKEKISGLCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
+ +++ A L ++I L Y +LD+ GG VK H+ ++ G G + I+
Sbjct: 254 QAKELTAELGKRIRLLMAHDYGKVELLDIEGGKAYVKY--HHYQEEGKGRF-------IM 304
Query: 345 HDYPPKSS 352
D PP++S
Sbjct: 305 LDCPPEAS 312
>gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
Length = 647
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 21/290 (7%)
Query: 4 RHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSI--ALTPVIANLI---NPHNPNDPI 56
R K L + ++L ++K +E + ++ EI+ Y I +TP +L NP+ + +
Sbjct: 247 REKGLETLRELNELGIVKVPEEDLKQV-EIAVKYGIPWGITPYYLHLWDFENPYKEDRHV 305
Query: 57 ARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
RQ +P ++ + + RED +G+++ SPL I RY +LK CP C
Sbjct: 306 RRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYDTCPQICV 365
Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
+C R V G+ EAA+ + E + +V+ TGGDPL LS K + K++
Sbjct: 366 YCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKIIDKIMSR 425
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
L HV +R+ SR+ + P RI L + L +P V I+ H YE + E
Sbjct: 426 LSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAYEVTPEVA 485
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
A ++ GI + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 486 EATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYP 534
>gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
Length = 621
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 72 EERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVL 126
+ERE D +G+++ SP I RYP +LK H CP C +C R M K +
Sbjct: 296 DEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTCPQICVYCQRNWEIMTAMDKEAIP 355
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A+ + E I +V+ TGGDP IL + ++ ++K L + HV+++RF +R P+
Sbjct: 356 TRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIEHIVKRLSELDHVKMIRFGTRTPV 415
Query: 187 VDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
P RI PE + L +P +++ H H YE + E A++ L I + +Q V
Sbjct: 416 TVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEVTPEMAEAVTNLRKNKIYVYNQQV 475
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+ E A L + I PYY +P T + + + +I+ KE+
Sbjct: 476 FTFWNSRRFETSA-LRIALKSIGIDPYYTFYPKGKWETKDYLVPV---ARILQERKEEAR 531
Query: 303 GLCQPF 308
L F
Sbjct: 532 VLPGTF 537
>gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 384
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 55 PIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKG---IVHRYPDRILLKLLHVCPVYCR 110
P+ R P KE L + P E + D + P I+ +Y +R L C +C+
Sbjct: 62 PLHRMVYPTKERLLVCAPGEVAYFVDDRENMPEDAPGNIIQKYRNRALFMPTSTCVSHCQ 121
Query: 111 FCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
+CFR++++ Q G + K +Y+ I EVI +GGDP+ L + LQ ++
Sbjct: 122 YCFRQDVLSEQHETGKTVLDKAILELDSYLSMHPDIQEVILSGGDPMTLPMESLQSIISA 181
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
++ V+ +R H++ PQ + E ++ L AG V + H HPYE E I
Sbjct: 182 IKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLLASAG--VRLVFHLTHPYELCEVVRKTI 239
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
R+ + GI +Q +L+ IND PE+L ++T L I+ + PD ++ F +++
Sbjct: 240 KRIQDTGIRCYNQFPILRQINDHPEVLRRHLKTLDCLGIRNLSVFIPDPINFSALFSISL 299
Query: 288 EEGQKIVASLKEKI-SGLCQPFYILDLPGGYGKVK 321
+ I+ L + S + +++D G +V+
Sbjct: 300 ARLRNIINELNWRSPSWINSTRFVMDTKVGKVRVR 334
>gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
Length = 533
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 16/253 (6%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L+ C YC +CFR + K+ ++ Y+ + +
Sbjct: 214 LTGVQHKYSETVLVFPSAGQTCHAYCTYCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEE 273
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-----E 195
+ +++ TGGDP+++ K L + L+ L ++ H++ +R +R PQR E
Sbjct: 274 VSDILMTGGDPMVMKTKSLARYLEPLTDPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADE 333
Query: 196 LIQCLK----EAGKPVYIAIHANHPYEFSEEAI-AAISRL-ANAGIILLSQSVLLKGIND 249
+I+ L+ E G+ V + H +H E S + + AAI R+ A + SQS +++GIND
Sbjct: 334 VIELLRRVREEGGRHVAVMAHLSHARELSTDKVKAAIQRIQKEAFATIRSQSPVMRGIND 393
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
++ A RT V + I PYY+ F + + KI + SGL +
Sbjct: 394 SSDVWAEKWRTEVNMGIIPYYMFLARDTGAQQFFDVPMATAHKIYSDALRNCSGLIRTAR 453
Query: 310 ILDLPGGYGKVKI 322
+ GKV++
Sbjct: 454 GPSMSCTPGKVEV 466
>gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
Length = 449
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
PI DN PL G+ H+Y + +L C YC FCFR +++++
Sbjct: 118 PILDN--EPLSGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQML 175
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192
+ Y++ +++ +++ TGGDP+I++ + L ++ L + H++ +R ++ PQR
Sbjct: 176 VEYLKRHTEVTDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRY 235
Query: 193 -----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243
++++ +E +G+ + + H NHP+E E A A+ R+ + G + QS L
Sbjct: 236 LTDKDADDVLRIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPL 295
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
++ IND+P+ A L T V L PYY+ +F + + +I + +SG
Sbjct: 296 IRHINDNPKDWATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSG 355
Query: 304 LCQPFYILDLPGGYGKVKID 323
L + + GK+ ID
Sbjct: 356 LARTVRGPSMSAFPGKIMID 375
>gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus]
Length = 448
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 29/308 (9%)
Query: 36 SIALTPVIANLINPHNPND--------PIARQFIPQKE----ELNILPEEREDPIGDNNH 83
S+ L P + N + P D P+ R +P + E P D + +
Sbjct: 76 SMLLPPQMLNTMVPEGAADFTGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEM 135
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALA 136
++G+ HRYP ++L +L+ CP YC C R ++VG+ V K + L
Sbjct: 136 WVVEGLTHRYPTKVLAELVSTCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLD 195
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195
Y++ + +V+ +GGD + +L+ L L I+ V+ +R ++ PQ + P+
Sbjct: 196 YLRRTPAVRDVVVSGGDVANVPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQ 255
Query: 196 LIQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGI 247
+++ + A + V +A+H NH + A L +AG+ + +Q VL++G+
Sbjct: 256 VVEGMSRVARTAASRGVNLAVHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGV 315
Query: 248 NDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
N P+ L L E I PYY + D+ H+R ++ E Q + A++ + G
Sbjct: 316 NATPDDLLELCFALQGEANILPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYAT 375
Query: 307 PFYILDLP 314
P + D+P
Sbjct: 376 PRIVCDVP 383
>gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
Length = 174
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%)
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L ++ L I H++ LR HSR+P+V P R+ L Q L + V + H NH E
Sbjct: 7 LDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINHANEIDA 66
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
++++L AG+ LL+QSVLL+ INDD + LA L + I PYY+H D G +
Sbjct: 67 ALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLDKVQGAA 126
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
HF ++ ++ ++I+ +L K+SG P ++ G K +D
Sbjct: 127 HFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLD 168
>gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4]
gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4]
Length = 463
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 32/311 (10%)
Query: 36 SIALTPVIANLINPHNPNDP-----------IARQFIPQKEELNIL----PEEREDPIGD 80
S+ L P + N + PH DP I R +P + + + P D + +
Sbjct: 88 SMLLPPQMINTMAPHAGTDPAKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHE 147
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAA 134
++G+ HRYP ++L +++ CP YC C R ++VG+ + L D + A
Sbjct: 148 AEMWVVEGLTHRYPTKVLAEMISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDA 207
Query: 135 LA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192
+ Y++ + +V+ +GGD + +L+ L L I+ V+ +R ++ PQ +
Sbjct: 208 MTDYLKRTPGVRDVVVSGGDVANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWL 267
Query: 193 NPELIQCLKEA-----GKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244
P++ + L+ + V +AIH NH + A G+ + +Q VL+
Sbjct: 268 QPKVTEGLQRVALTAQARGVNLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLM 327
Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+G+ND P L +L E I PYY + D+ H+R+ + E Q++ S+ + G
Sbjct: 328 RGVNDTPAALLDLCFALQGEANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPG 387
Query: 304 LCQPFYILDLP 314
P + D+P
Sbjct: 388 YATPRIVCDVP 398
>gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 470
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 50 HNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVC 105
H DP+ + +E+LN P +++ + L G+ H+Y + +L+ C
Sbjct: 114 HKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKLTGVQHKYSETVLVFPAAAQTC 172
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
YC +CFR + K+ + Y+ E ++ +++ TGGDP+I+ K L +
Sbjct: 173 HAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEVSDILMTGGDPMIMKTKSLAQY 232
Query: 166 LKTL---RYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG-KPVYIAIHA 213
L+ L ++ H++ LR +R PQR EL + ++E G + + I H
Sbjct: 233 LEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADECIELFRRVREQGNRHIAIMAHL 292
Query: 214 NHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H E S ++A+ I + A A I SQS +++G+NDD E+ A R V++ I PY
Sbjct: 293 GHDRELSTDKFQDAVNRIQKEAYATI--RSQSPIMRGVNDDAEVWARKWRKEVQMGIIPY 350
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
Y+ +F + + K+ + SGL + + GKV++
Sbjct: 351 YMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARGPSMSCTPGKVEV 403
>gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6]
gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6]
Length = 582
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 26/291 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEIS------NHYSIALTPVIANLIN--PHN 51
Q RH +D+ IK+ ++DE E S NH +TP +L++ P +
Sbjct: 180 WQFRH----VFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSD 235
Query: 52 PNDPIARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVC 105
+ + RQ P + + R+D + + + SP+ I RYP ++K C
Sbjct: 236 MDYAVRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESC 295
Query: 106 PVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
P C +C R + S + + EAA+ + E ++ +V+ TGGDPL++ +
Sbjct: 296 PQICVYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLID 355
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGKP-VYIAIHANHPYEF 219
++L L I H++ +R SR P PQR+ EL + L +E G+ + + H HPYE
Sbjct: 356 RILNRLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEV 415
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ E +AAI R+ GI + +Q V + E ++L ++ + PYY
Sbjct: 416 TPETLAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYY 465
>gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
Length = 454
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 18/265 (6%)
Query: 77 PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P G H+ PL G+ H+Y + +L C YC FCFR + +
Sbjct: 108 PAGQMTHNVPMLDGRPLPGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFN 167
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+++++ Y++ ++ +V+ TGGDP++++ + L ++ L I H+Q +R ++
Sbjct: 168 ARESDELSRYLRLHPEVTDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAY 227
Query: 188 DPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILL 238
PQR + L + + GK + + H NHP E E A A+ R+ G +
Sbjct: 228 WPQRFVTDKDADAVLRLFERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVR 287
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
QS +++ IND E L T V L PYY+ +F L + + I +
Sbjct: 288 MQSPIVRHINDSAETWQELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAY 347
Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323
+++SGL + + YGKV +D
Sbjct: 348 QRVSGLSRTVRGPSMSTLYGKVLVD 372
>gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 480
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 47/312 (15%)
Query: 42 VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76
V+ NLI+ P+DPI + PQ+ +++ L E +D
Sbjct: 55 VVENLIDWSRVPDDPIFQLVFPQRGMLSEVDFDDVRTLVESSDDSEALARAVERIRRRLN 114
Query: 77 --PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
P G H+ PL G+ H+Y + ++ C YC +CFR +G
Sbjct: 115 PHPGGQLTHNTATLAGRPLPGVQHKYRETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMR 174
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
+ ++ T +AY++ +I +V+ TGGDP+I++ + L++ ++ L + H+Q +R ++
Sbjct: 175 IETRSTSELVAYLRAHPEITDVLITGGDPMIMATRTLRRYIEPLLVPELSHIQNIRIGTK 234
Query: 184 VPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
P R + + CL+ A + + I H HP E A AI R+ + G
Sbjct: 235 SVAYWPHRFVSDADADDCLRLFEEVAAANRHLAIMGHYTHPVELHPALAREAIRRIRDTG 294
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ Q+ L++ +ND PE+ + L RT V L + PYY+ +F + + +I
Sbjct: 295 AQIRMQAPLIRHVNDAPELWSELWRTGVRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIF 354
Query: 295 ASLKEKISGLCQ 306
+SGL +
Sbjct: 355 RRAAANVSGLAR 366
>gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
Length = 819
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+A Q++P KEELN + IG + L+ + Y +R++ L CPVYCRFCFR+
Sbjct: 170 VACQYLPFKEELNSVGHTNT-WIGQFHQGLLEQM---YQNRVIFLLNMTCPVYCRFCFRK 225
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
S+ D A+A+++ I E++ TGGDP I + +++ ++ L+ I HV
Sbjct: 226 HK-DSRNEKNPGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHV 283
Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLK-------EAGKPVYIAIHANHPYEFSEEAIA 225
+ LR +R PQ + N + LK + GK + +A H HP E S ++++
Sbjct: 284 ETLRLATRSIAYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLS 343
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
IS L GI + Q+ L+G ND+ L L + + +Y++ P
Sbjct: 344 IISDLVAGGIGVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIP 392
>gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5]
gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5]
Length = 468
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 28/307 (9%)
Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
S+ + P + N + PH P DPI R IP ++ + P D + +++
Sbjct: 97 SMLVPPQMLNTMVPHQPMSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
+G+ HRYP ++L +LL CP YC C R ++VG+ V K T +A + Y
Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITY 216
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++
Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 276
Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N
Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336
Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
L +L E I PYY + D+ H+R+ + Q++ + + G P
Sbjct: 337 ATSADLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 396
Query: 308 FYILDLP 314
+ D+P
Sbjct: 397 RIVCDVP 403
>gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440]
gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 448
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 46/338 (13%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEELNILPEE-------------------------RE 75
V+++LI+ P+DPI R PQ+ L E
Sbjct: 54 VLSHLIDWDRIPDDPIFRLVFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNP 113
Query: 76 DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
P G H+ L G+ H+Y + +L + C YC +CFR
Sbjct: 114 HPSGQQQHNVPHLDGHELPGMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRF 173
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
++ E + Y+ + +V+ TGGDP+I+S +RL+ ++ L + V+ +RF ++
Sbjct: 174 AAPGPEQLVTYLHRHPAVTDVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVA 233
Query: 187 VDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
P R + L + AG+ V + H +HP E + E A AI+R+ + G ++
Sbjct: 234 YWPYRFVSDSDADDLLRLFAQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVV 293
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
Q+ L++ +NDDP +++ R + L PYY+ +F++ + I +
Sbjct: 294 YCQAPLIRYVNDDPHAWSDMWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTA 353
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
+ + GL + + GKV +D +++ +G +
Sbjct: 354 YQDLPGLARTVRGPVMSATPGKVLVD--GVERTPHGEF 389
>gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 32/311 (10%)
Query: 36 SIALTPVIANLINPHNPNDP-----------IARQFIP----QKEELNILPEEREDPIGD 80
S+ L P + N + PH DP I R +P + E P + D + +
Sbjct: 86 SMLLPPQMLNTMAPHAGTDPAKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHE 145
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EA 133
++G+ HRYP ++L +LL CP YC C R ++VG+ V + T +A
Sbjct: 146 AEMWVVEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDA 205
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192
+ Y++ + +V+ +GGD + +L+ L L I+ V+ +R S+ PQ +
Sbjct: 206 MIDYLKRTPGVRDVVVSGGDVANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWL 265
Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLL 244
P++++ L + G + I H NH + A G+ + +Q VL+
Sbjct: 266 QPKVVEGLARVAGTARRRGVNLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLM 325
Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+G+N P L +L E I PYY + D+ H+RL + E Q++ ++ + G
Sbjct: 326 RGVNATPADLLDLCFALQGEANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPG 385
Query: 304 LCQPFYILDLP 314
P + D+P
Sbjct: 386 YATPRIVCDVP 396
>gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
Length = 490
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 141/308 (45%), Gaps = 29/308 (9%)
Query: 36 SIALTPVIANLINPHNPND--------PIARQFIP----QKEELNILPEEREDPIGDNNH 83
S+ L P + N I P D P+ R +P ++ + P D + ++
Sbjct: 93 SMLLPPQMLNTIVPQGAADYTEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEM 152
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALA 136
+G+ HRYP ++L ++L CP YC C R ++VG+ K T+ + + L
Sbjct: 153 WATEGLTHRYPTKVLAEVLPTCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLD 212
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------ 190
Y++ + +V+ +GGD + RL+ L +L I++++ +R ++ + PQ
Sbjct: 213 YLRRTPGVRDVVVSGGDVANMPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDD 272
Query: 191 -RINPELIQCL-KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGI 247
R E + + ++ G V + H N + A + +AG+ + +Q VL++G+
Sbjct: 273 VRAGVERVATIARQRGVMVAMHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGV 332
Query: 248 NDD-PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
ND P++L I PYY + D+ + H+R+++++ Q + + + G
Sbjct: 333 NDSVPQLLDLCFALLDGATITPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFAT 392
Query: 307 PFYILDLP 314
P + D+P
Sbjct: 393 PRIVCDVP 400
>gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054]
Length = 487
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 31/311 (9%)
Query: 54 DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DP+ R +P + + + P D + + ++G+ HRYP ++L +LL CP YC
Sbjct: 107 DPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAELLSTCPQYC 166
Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG V ++ E L Y++ + +V+ +GGD + RL
Sbjct: 167 GHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGDLANVPWPRL 226
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAI--HAN 214
+ L L + V+ +R S+ + PQ + P+++ ++ A + V +A+ HAN
Sbjct: 227 ESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSVNLAVHTHAN 286
Query: 215 HPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
H + A L +AG+ + +Q VL++G+N P L +L E I PYY +
Sbjct: 287 HAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGEANILPYYFY 346
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG----------GYGKVKI 322
D+ H+RL + E Q + ++ + G P + D+P GY +V+
Sbjct: 347 LCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPDVGKRWVHQAVGYDRVRG 406
Query: 323 DTHNIKKVGNG 333
++ K G
Sbjct: 407 ISYWTKNYRTG 417
>gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C]
gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C]
Length = 463
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 22/292 (7%)
Query: 53 NDPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+DP+ R +P + + + P D + + + ++G+ HRYP ++L +LL CP Y
Sbjct: 116 DDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 175
Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C R ++VG+ V ++ E LA+++ I +V+ +GGD + R
Sbjct: 176 CGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVSGGDLANMPWPR 235
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYIAIHA 213
L++ + L I+ ++ +R S+ I PQ +P +++ + + G V + HA
Sbjct: 236 LERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARSRGVRVALHTHA 295
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
N + + A L AG+ + +Q VL++G+ND L +L + I PYY
Sbjct: 296 NAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFALCDHAGITPYYF 355
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ D+ H+R+ + Q I + + G P + D+P GK +D
Sbjct: 356 YMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 406
>gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
Length = 438
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 46/327 (14%)
Query: 42 VIANLINPHNP-NDPIARQFIPQKEEL-------------NILPEE--RED--------- 76
VI LIN +P NDPI R PQK+ L N P+E RE+
Sbjct: 44 VIDQLINWEDPLNDPIFRLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELN 103
Query: 77 --PIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
P G + P L G H+Y + IL K C YC FCFR
Sbjct: 104 PHPAGQKYNVPEVDGIKLHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKF 163
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRV 184
+ K+ + + YI+ +I +++FTGGDPLI+ L+ ++ + I H++ +R ++
Sbjct: 164 AMKEVDVLIEYIKRNPEITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKS 223
Query: 185 PIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGI 235
P R + L + + + G + H NH E + + A+ ++ G
Sbjct: 224 LGFWPYRFTEDEDAQELLDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGA 283
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++ +QS +L+ IND E+ A + + V + + PYY+ +F + + I
Sbjct: 284 VIRTQSPVLRHINDSSEVWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFR 343
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322
+K SGL + + GKV+I
Sbjct: 344 DAYKKTSGLARTVKGPSMSATPGKVRI 370
>gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
Length = 620
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 11/256 (4%)
Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
K + N +TP +L + NP + + RQ IP + + + E +ED +G
Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMG 312
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYI 138
+++ SP+ + RY ++K CP C +C R MV + E AL +
Sbjct: 313 EHDTSPIDLVTRRYVPIAIIKPYESCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWF 372
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
E + E++ TGGDP LS K ++++L + + HV +RF +R + P RI EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAE 432
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L K + ++ H YE + E + +L I + +Q V + ++ E +A L
Sbjct: 433 LLGSFEKSLMVSTHVESCYEITPEVKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LR 491
Query: 259 RTFVELRIKPYYLHHP 274
++ I PYY +P
Sbjct: 492 IALKKVGIIPYYTFYP 507
>gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
Length = 458
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 13/238 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N ++G+ H+Y + +L C YC +CFR S ++++ E LAY++
Sbjct: 130 NGKVVRGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLK 189
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN---- 193
E I +V+FTGGDP+++ L++ ++ L + HV +R ++ P+ P R
Sbjct: 190 EHPGISDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGND 249
Query: 194 -PELIQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
EL++ +E GK + + +H +H E + E A++R+ G ++ Q+ L++ +N
Sbjct: 250 ADELLRLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVN 309
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
D PE+ + + V+ PYY+ +F++ + I + ++++SGL +
Sbjct: 310 DTPEVWTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSR 367
>gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
Length = 465
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 85 PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
PL G+ H+Y + +L C YC FCFR ++ ++ AY++
Sbjct: 126 PLSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHP 185
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPE 195
++ +++ TGGDPL++S + L + L+ L H+Q +R ++ PQR + +
Sbjct: 186 EVTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDD 245
Query: 196 LIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ ++ +G+ + I H NHP E A A+ R+ G + Q+ L++ IN+DP
Sbjct: 246 LLRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDP 305
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
A L T V L PYY+ + +F+L + +I + +SGL +
Sbjct: 306 AAWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGP 365
Query: 312 DLPGGYGKVKID 323
+ GKV +D
Sbjct: 366 SMSAFPGKVMVD 377
>gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 598
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
D +G+ + SP + I RYP +LK + CP C +C R + KG EA
Sbjct: 281 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 340
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ +I E I EV+ TGGDPL + ++RL ++++ + I ++ +R +R + P R
Sbjct: 341 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 400
Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
L+ L +P V + H HPYE + E A++RL GI + +Q V +
Sbjct: 401 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPELAEAVNRLRLRGIPVYNQLVYTFYASR 460
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
E A L R + I PYY + T+ +R+ I
Sbjct: 461 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 497
>gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2]
gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2]
Length = 440
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L GI H+Y + +L C +C FCFR G + KD + + Y++ + +
Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINP------- 194
+ +++FTGGDPL +S K L L + K ++ +R ++ P R
Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL + + +AG + I H NHP E + E A+ + G ++ SQS +L IN +
Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I + + + + L I PYY+ +F + + + KI +SG+ +
Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360
Query: 313 LPGGYGKVKID 323
+ GK+KI+
Sbjct: 361 MSASPGKIKIE 371
>gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
Length = 636
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%)
Query: 5 HKTLTSAQDLYNANLIK--KEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIAR 58
K L ++L ++K +E ++E+ + + +TP +L + P+ + + R
Sbjct: 237 RKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEPYKEDRHVRR 296
Query: 59 QFIPQKEELNIL---PEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
Q +P K ++ + ++RE D +G+++ SP+ + RY +LK CP C +C
Sbjct: 297 QVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFDTCPQICVYC 356
Query: 113 FRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
R V G+ E A+ + E+ + +V+ TGGDP LS+K + K++ L
Sbjct: 357 QRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKIIDKIMSRLS 416
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAA 226
HV +R+ +R+P+ P R+ EL + L +P V ++ H YE + E A
Sbjct: 417 EFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAYEVTPEMARA 476
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
+ L GI + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 477 VYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYP 523
>gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 424
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 14/236 (5%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK 141
+ ++ +PD +L C YC +CFR S+ + S KD + + Y++
Sbjct: 124 YRSFNNVISLFPD----PMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKAN 179
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP------- 194
+I E +FTG DPL L+ ++++ + L I V +RF+++ P R
Sbjct: 180 PEINETLFTGADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNI 239
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL + + +G+ + H H E ++ I A+ + G ++ Q +++GIND E
Sbjct: 240 LELFKHIVASGRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIE 299
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
NL V L ++PYY+ + FR+ + + I ++++ GL QPF
Sbjct: 300 DWVNLWSQEVALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355
>gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
Length = 448
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 49/369 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSI-ALTPVIANLINPHN-PNDPIARQF 60
L+ TL++ +DL I +E+ E++ + N A V+ LIN ++ PNDP+
Sbjct: 14 LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73
Query: 61 IPQ----------------------KEELNILPEERED----PIGD--------NNHSPL 86
PQ KE N+ E R P G + + L
Sbjct: 74 FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133
Query: 87 KGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y+ E +I
Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI-----NPELI 197
+V+FTGGDP+I+ K K + L K +++ +R ++ P + + E++
Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253
Query: 198 QCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253
Q + ++G + H NH E S A+ +AI + G + +QS LL INDD E+
Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
AN+ V+L PYY+ +F + + + +I + +SGL + +
Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373
Query: 314 PGGYGKVKI 322
GKV++
Sbjct: 374 SATPGKVQV 382
>gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 572
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
D +G+ + SP + I RYP +LK + CP C +C R + KG EA
Sbjct: 255 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 314
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ +I E I EV+ TGGDPL + ++RL ++++ + I ++ +R +R + P R
Sbjct: 315 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 374
Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
L+ L +P V + H HPYE + + A++RL GI + +Q V +
Sbjct: 375 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPDLAEAVNRLRLRGIPVYNQLVYTFYASR 434
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
E A L R + I PYY + T+ +R+ I
Sbjct: 435 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 471
>gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 460
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 32/314 (10%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
+ ++ + + +T I NPH P ++ +PE
Sbjct: 101 DALERALRVGGSAPVEVTAAIHRRFNPH-----------PGRQMTMNMPEL--------G 141
Query: 83 HSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
S + G+ H+Y + L+ C YC FCFR + +++ +++ +AYI+E
Sbjct: 142 GSGVSGLQHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKE 201
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP---- 194
+I +V+ TGGDPLI+ L++ L L + HV +R +++ P R
Sbjct: 202 HKEISDVLLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDA 261
Query: 195 ----ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIND 249
L++ + +G+ + I +H +HP E + A A+ RL + G +L SQS +++G+ND
Sbjct: 262 DDLIALLEEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVND 321
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D I L V I PYY+ + F + + +I ++SGL +
Sbjct: 322 DARIWQELWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSAR 381
Query: 310 ILDLPGGYGKVKID 323
+ GKV +D
Sbjct: 382 GPIMSTDMGKVAVD 395
>gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
Length = 467
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 143/307 (46%), Gaps = 28/307 (9%)
Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
S+ + P + N + P P DPI R IP ++ + P D + +++
Sbjct: 96 SMLVPPQMINTMVPFAPPSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---EAALAY 137
+G+ HRYP ++L +LL CP YC C R ++VG+ V LS K +A + Y
Sbjct: 156 VAEGLTHRYPTKVLAELLATCPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITY 215
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++
Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 275
Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N
Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 335
Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
+ L +L E I PYY + D+ H+R+ + Q++ + + G P
Sbjct: 336 ATSKDLLDLCFGLQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 395
Query: 308 FYILDLP 314
+ D+P
Sbjct: 396 RIVCDVP 402
>gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 491
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%)
Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
S+ +TP + N + P DPI R IP ++ + P D + +++
Sbjct: 120 SMLVTPQMLNTMVPFESMSTDALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 179
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
+G+ HRYP ++L +LL CP YC C R ++VG+ + K T +A ++Y
Sbjct: 180 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISY 239
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
++ + +V+ +GGD + K L+ L L I V+ +R ++ + PQ + ++
Sbjct: 240 LKAHPGVRDVVVSGGDVANVPWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADV 299
Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N
Sbjct: 300 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 359
Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
P++L E I PYY + D+ H+R+ + Q++ + + G P
Sbjct: 360 ATTPDLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATP 419
Query: 308 FYILDLP 314
+ D+P
Sbjct: 420 RIVCDVP 426
>gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
Length = 461
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 17/253 (6%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L K C YC +CFR K ++S + E + Y+ +
Sbjct: 126 LHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHPE 185
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRI-----NP 194
+ +++ TGGDP+ + L++ ++ L ++H +Q +R ++ P R +
Sbjct: 186 VSDLLITGGDPMFMRSSVLRRYIEPL--LRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSD 243
Query: 195 ELIQCLKE---AGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
+LI E AG + I H H E S A+ AAI R+ G I+ QS +++ INDD
Sbjct: 244 DLISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDD 303
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ A + R V+L + PYY+ ++F + I E K+ + ++SGL +
Sbjct: 304 ASMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRG 363
Query: 311 LDLPGGYGKVKID 323
+ GK+ +D
Sbjct: 364 PSMSAKPGKILVD 376
>gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
Length = 456
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 32/322 (9%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE---ER 74
N++KK D++ A +I P + + ++ + ELN P E
Sbjct: 82 NMLKKRHFDQV---------------AQMIKNETPKEEMDKKINDVRMELNPHPAGQLEL 126
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
P + + L G+ H+Y + L C YC FCFR + ++ E
Sbjct: 127 NVP-SLKDGTKLYGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGE 185
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQ 190
YI E +I +V+FTGGDP+I+ K + + TL K ++ +R +++ P
Sbjct: 186 QLAQYIGEHPEISDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPY 245
Query: 191 RI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQS 241
++ + + + ++G + I H NHP E S +A+ +AI ++ G + +QS
Sbjct: 246 KVLSDDDAAETLDTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQS 305
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
LL INDD + + V L PYY+ +F +++ +I S ++
Sbjct: 306 PLLSHINDDADAWVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRV 365
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
SGL + + GKV I+
Sbjct: 366 SGLARTVKGPSMSATPGKVLIN 387
>gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
Length = 460
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 14/282 (4%)
Query: 56 IARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFC 112
+ R P +E LN P ++ + + ++G+ H+Y + +L+ H C YC +C
Sbjct: 120 LRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVLVFPSHGQTCHAYCGYC 179
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--R 170
FR G D + + Y++ ++ +V+FTGGDP+I++ L++ ++ L
Sbjct: 180 FRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMIMTTDVLRQYVEPLLGP 239
Query: 171 YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE 222
+H++ RF ++ P R + L + + +G+ V + H +H E +
Sbjct: 240 GFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRHVAVMAHFSHARELGTD 299
Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
A+A A+ R+ + G ++ Q+ +++ +ND+ A + R V L PYY+
Sbjct: 300 AVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLGAVPYYMFVERDTGARE 359
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+F L + + I +++SGL + + GKV +D
Sbjct: 360 YFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401
>gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL
15998]
gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL
11379]
gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
Length = 448
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 47/339 (13%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN-------------------ILPEEREDPIGDN 81
V++ LI+ H P DPI + PQ L I E R G N
Sbjct: 54 VLSELIDWHRVPEDPIFQLVFPQHGMLRAEDEKLLVDLARARAPKREIAAEVRRIRAGLN 113
Query: 82 NH--------------SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
H L+GI H+Y + +L + C YC +CFR
Sbjct: 114 PHPSGQMELNVPSLADDALEGIQHKYRETVLYFPQQGQTCHSYCTYCFRWAQFIGDADLR 173
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ E + Y++ + +V+FTGGDP+++S +RL+ L+ + ++ V+ +R ++
Sbjct: 174 FAAPGPERLVEYLRCHPAVSDVLFTGGDPMVMSTERLRSHLEPVLSVETVRTVRIGTKAV 233
Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236
PQR + L + + +G+ + + H +HP E + A A+ R+ G +
Sbjct: 234 AYWPQRFVSDADADDLLRLFEQVVASGRTLAVMAHFSHPRELETATARRALGRVRATGAV 293
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ Q+ L+ +NDD A L R + PYY+ +F + + +G +I +
Sbjct: 294 VYCQAPLIAHVNDDARTWAELWRAELSAGTVPYYMFVERDTGPRHYFEVPLTKGLEIFRT 353
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
K+ GL + + GKV +D +++ G +
Sbjct: 354 AYSKLPGLARTVRGPVMSATPGKVLVD--GVEETAEGRF 390
>gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 818
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109
+A Q++P EEL DP+G N H L + Y +R++ L CPVYC
Sbjct: 169 VAYQYMPFVEEL--------DPVGHTNTWIGQFHQGL--LEQMYQNRVIFLLNMSCPVYC 218
Query: 110 RFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
RFCFR+ E + TV +D A+A++++ I E++ TGGDP L+ + +
Sbjct: 219 RFCFRKHKESRNEKNPTV---EDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAID 274
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEA-------GKPVYIAIHANHPY 217
L I HVQ LR +R P+ + LK+ GK + IA H HP
Sbjct: 275 GLMGIDHVQSLRLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPD 334
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DL 276
E S E++ I+ L +GI + Q+ L+ ND L L R + +Y++ P
Sbjct: 335 EVSPESLGIITELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSP 394
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
G S + + +G I L+ +S P
Sbjct: 395 IHGNSVYWSPLSDGIDIAEYLRAHLSDRSVP 425
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L S TEA + YI+ + I +VI L + ++ + I HV +R +P
Sbjct: 554 LQSDVTEADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRIS--LP 611
Query: 186 IVD--PQRINPELIQCLKEAGK-----PVYIAIHAN--HPYEFSEEAIAAISRLANAGII 236
V+ P+ I+P +IQ L + P+ + I + + +E A + RL N GI
Sbjct: 612 EVNYAPESISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGIT 671
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKI 293
+ + + LL IND+P+ + NL + I+ ++L+ HP A + + + I
Sbjct: 672 VYANTPLLGEINDNPDEIYNLTYAYRRAGIEFHHLYVAGHPIQKAWNEKHPIDMYDVVDI 731
Query: 294 VASLKEKISGLCQPFYILDLP---------------GGYGKVKIDTHNIK--KVGNGSYC 336
+ ++ + SG P YIL P GG +VK+D++++ K + SY
Sbjct: 732 ASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYDLPYFKALDSSYT 791
Query: 337 I 337
+
Sbjct: 792 L 792
>gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183]
gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length = 446
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 88 GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L K C YC +CFR + L+ D Y+ ++
Sbjct: 139 GMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRVT 198
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE------LI 197
V+FTGGD +I+ L++ ++ L ++ ++ +R ++ PQ+ +P+ L
Sbjct: 199 NVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRLF 258
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + AGK + H +HP E + A+ R+ G ++ +Q+ L++ INDDP++
Sbjct: 259 EQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWET 318
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ RT + + PYY+ +F + + +I +SGL + +
Sbjct: 319 MWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSAT 378
Query: 317 YGKVKID 323
GKV +D
Sbjct: 379 PGKVCVD 385
>gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 452
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 146/346 (42%), Gaps = 52/346 (15%)
Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
E+K +++ + +AN LI+ N P DPI + PQK L ER + N S
Sbjct: 42 EMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQLSFPQKGMLAPEAFERMATLLRQNPS 101
Query: 85 P---------------------------------LKGIVHRYPDRILL--KLLHVCPVYC 109
P L G+ H+Y + L C YC
Sbjct: 102 PQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKLPGMQHKYKETALFFPAQGQYCHSYC 161
Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
FCFR + VG K +S D + Y+ +I +++ TGGDP+++ ++ + ++
Sbjct: 162 TFCFRWAQFVG--KAMRFNSNDADTLHRYLAAHPEISDLLITGGDPMVMKTTKIAQYVEP 219
Query: 169 L---RYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPY 217
L +HVQ +RF ++ P R + L + L +AGK V I H NH
Sbjct: 220 LIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADELLALFRRLVKAGKHVSIMAHLNHWQ 279
Query: 218 EFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E A+ R+ G + +Q+ LLK IND+ + A + + V+L I PYY+
Sbjct: 280 EMETPIFEEAVRRIRATGANIRAQAPLLKNINDNADDWARMWQKQVKLGIIPYYMFVERD 339
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+F + + + +I K+SGL + + G GKV+I
Sbjct: 340 TGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPSMSAGPGKVEI 385
>gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f]
gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length = 457
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 55/334 (16%)
Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGD----------------------NNH------ 83
P+DPI R PQ ++LP E+ PI N H
Sbjct: 67 PDDPIYRLVFPQP---DMLPAEQVAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRE 123
Query: 84 --------SPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ L G+ H+YP+ +L H C YC +CFR + ++S++ +
Sbjct: 124 LNVPELAGTRLDGLQHKYPETVLYFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDD 183
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQ 190
+ Y++ ++ +V+ TGGDP+++S + L + + L + H+Q +R ++ P
Sbjct: 184 LVTYVRAHPEVTDVLITGGDPMVMSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPA 243
Query: 191 RI--NP------ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQS 241
R +P L + + +G+ + + H +HP E ++ A A+ R+ + G ++ +Q
Sbjct: 244 RFVTDPGADDTLRLFERVVASGRSLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQG 303
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+++ +NDD A + + V L + PYY+ +F + + +I ++ +
Sbjct: 304 PVIRSVNDDAGAWAAMWQRQVRLGMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSV 363
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
SGL + + GKV +D + VG Y
Sbjct: 364 SGLARTVRGPVMSATPGKVVVD--GVHTVGAEKY 395
>gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 314
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 91 HRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
H+Y + +L C YC FCFR L+S++ +A + Y+ E ++ +++
Sbjct: 3 HKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSDIL 62
Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------LIQCL 200
TGGDP+I+ + L + L + H++ +R ++ P R + L
Sbjct: 63 LTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTLFA 122
Query: 201 KEAGKPVYIAI--HANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
K A K ++A H NHP E +A+ AI + G + +QS LL IND PEI A +
Sbjct: 123 KVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWAEM 182
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+T EL PYY+ +F +++ I + + ++GL + +
Sbjct: 183 WKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSATP 242
Query: 318 GKVKI 322
GKV++
Sbjct: 243 GKVQM 247
>gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
Length = 467
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%)
Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
S+ + P + N + P P DPI R IP ++ + P D + +++
Sbjct: 96 SMLVPPQMLNTMVPFAPMTTEALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
+G+ HRYP ++L +LL CP YC C R ++VG+ + K T +A + Y
Sbjct: 156 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITY 215
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
++ + +V+ +GGD + + L+ L L I+ V+ +R ++ + PQ + ++
Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADV 275
Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N
Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 335
Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
P++L E I PYY + D+ H+R+ + Q++ + + G P
Sbjct: 336 ATTPDLLDLCFALQGEAGILPYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATP 395
Query: 308 FYILDLP 314
+ D+P
Sbjct: 396 RIVCDVP 402
>gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
Length = 445
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 64 KEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGS 120
+++LN P +++ + N P+ GI H+Y + +L+ C YC FCFR
Sbjct: 105 RQQLNPHPSGQKQHNVPTFNSEPVPGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVG 164
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQIL 178
+G +++++ Y+Q+ ++ +V+FTGGDP+ + ++L + L K H+Q +
Sbjct: 165 LEGLKFATRESGMFQQYLQQHQEVRDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTI 224
Query: 179 RFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISR 229
R ++ P R + L + + + GK + I H H E A AI R
Sbjct: 225 RIGTKSISFWPYRYVTDEDADNTLRLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRR 284
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
+ + G + +Q+ +++ IND E A +++ V L PYY+ +F + +
Sbjct: 285 IRSTGAQIRTQAPVVRHINDSAETWAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVR 344
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+I +++SGL + + GKV ID
Sbjct: 345 VLEIYREAVKQVSGLARTIRGPLMSALPGKVAID 378
>gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
Length = 441
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 56 IARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFC 112
+AR + +N PE ++D + + PL G H+Y +L C YC +C
Sbjct: 100 LARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQTLLYFPAAGQTCHAYCTYC 159
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FR + S+ D A+AY++ ++ +V+ TGGDP++++ +RL++ L+ +
Sbjct: 160 FRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDPMVMTAERLRQHLEPFLAV 219
Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ +Q +R ++ P R + L + + EAGK + H +HP E E AI
Sbjct: 220 ESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKTPALMAHLSHPVEL-EPAI 278
Query: 225 A--AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
A A+SR+ + G ++ Q+ ++ +NDD A L R PYY+ +
Sbjct: 279 ARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAGAVPYYMFVARDTGPRDY 338
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
F++ + ++ + GL + + GKV +D
Sbjct: 339 FKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379
>gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 217
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR +++ T EA A I I EV+ +GGDPL L+ +L ++ L I
Sbjct: 135 FRRHFPYAEE-TAARDGWREAG-AAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192
Query: 173 KHVQILRFHSRVPIVDPQRINPELI 197
H++ LR HSR+PIV P+R++ L+
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLL 217
>gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 455
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + L G+ H+Y + L C YC FCFR + ++ E + Y++
Sbjct: 130 DGTKLYGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLR 189
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI----- 192
E +I +V+FTGGDP+I+ K + L + +++ +R ++ P +
Sbjct: 190 EHPEISDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDD 249
Query: 193 NPELIQCLKE-AGKPVYIAI--HANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
E++ K K +++A+ H NH E +A+ AI ++ G + +QS LL+ IN
Sbjct: 250 AEEMLDIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHIN 309
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD ++ A + + V+L PYY+ +F +++ + Q+I +K++GL +
Sbjct: 310 DDADMWAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTV 369
Query: 309 YILDLPGGYGKVKI 322
+ GKV+I
Sbjct: 370 RGPSMSATPGKVQI 383
>gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
Length = 146
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGII 236
+R HSR+P+V P RI E I+ + + + +H NH E + AIS++ NAGI
Sbjct: 1 MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+L+QSVLLKGIND + A L T + + PYYLH D G++HF + + + +
Sbjct: 61 VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120
Query: 297 LKEKISGLCQP 307
+ K+ G P
Sbjct: 121 MTAKLPGYLVP 131
>gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 459
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 54 DPIARQFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
DP+ R +P + + + P D + + ++G+ HRYP ++L +L+ CP YC
Sbjct: 115 DPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAELVSTCPQYC 174
Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C R ++VG+ V K + + Y++ + +V+ +GGD + +L
Sbjct: 175 GHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDVANVPWPQL 234
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAIHA--N 214
+ L L ++ V+ +R ++ PQ + P++++ L+ A + V +AIH N
Sbjct: 235 ESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVNLAIHTHVN 294
Query: 215 HPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
H + A AA + LA + +Q VL++G+N L +L E + PYY +
Sbjct: 295 HANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEAGVLPYYFY 354
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
D+ H+R+ + E Q++ ++ + G P + D+P
Sbjct: 355 MCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP 396
>gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
Length = 512
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 24/300 (8%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKGIVHRYPDRILL 99
I+ L+ + P + R+ ++E+N P +++ P D + PL G+ H+Y + +L
Sbjct: 127 ISKLMKNNAPRTVLQREAEVIRKEMNPHPAQQKTMNVPRVDGH--PLPGLQHKYRETVLF 184
Query: 100 --KLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
C YC +CFR VGS + S D++ Y++ + +++ TGGDP
Sbjct: 185 FPAEGQFCHAYCTYCFRWAQFTSVGSPQQ--FQSDDSKLLQLYLRRNRHVSDLLLTGGDP 242
Query: 155 LILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---A 203
+++S +RL + L + ++ +R ++ P R + +L++ +E +
Sbjct: 243 MVMSAQRLGGYILPLLKDTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKS 302
Query: 204 GKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G+ + I H +HP E S + AI RL G ++ +Q+ L+ +N DP A L+RT
Sbjct: 303 GRQLAIMAHFSHPRELSTPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTET 362
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
L + PYY+ +F + + +I + +SGL + + GKV +
Sbjct: 363 RLGVIPYYMFVERDTGARHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422
>gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
Length = 438
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 53/342 (15%)
Query: 42 VIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPI---------------------- 78
V+ LI+ +P DPI R PQ+ +LPE+ E +
Sbjct: 54 VLDQLIDWTDPAQDPIFRLVFPQR---GMLPEDDERSLESLVRSGAAKREMAAEVARIRA 110
Query: 79 GDNNHSP--------------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQK 122
G N H L G+ H+Y + +L C +C +CFR
Sbjct: 111 GLNPHPSGQREYNVPVHEGERLAGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDP 170
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ + ++Y+ + ++ +V+ TGGDP+++S +RL L+ L ++ V +R +
Sbjct: 171 SLRFAAPGPDRLVSYLHDHPEVSDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGT 230
Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233
+ PQR + L + + GK V + H HP E + A+ R+
Sbjct: 231 KSLAYWPQRFVSDADADSLLRLFERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRAT 290
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G ++ Q+ ++ INDD E A++ ++ + L PYY+ +F++ + +I
Sbjct: 291 GAVVYCQAPMVAHINDDAETWASMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEI 350
Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
+ + GL + + GKV +D ++ +G Y
Sbjct: 351 FHTAYRTLPGLARTVRGPVMSTTPGKVVVD--GVETLGGDRY 390
>gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_ANIW133C7]
Length = 447
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + L G+ H+Y + L C YC FCFR + ++ E + Y++
Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195
E ++ +V+FTGGDP+I+ TL K +++ +R ++ P + + +
Sbjct: 191 EHPEVTDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250
Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
+ LK ++G + I H NH E S + I AI R+ G + +QS LL IN
Sbjct: 251 ADETLKNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHIN 310
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD + A + + V L PYY+ +F + + + +KI S ++SGL +
Sbjct: 311 DDSSMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTV 370
Query: 309 YILDLPGGYGKVKI 322
+ GKV +
Sbjct: 371 RGPSMSATPGKVHV 384
>gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
Length = 445
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ GI H+YPD +L+ C YC+FCFR +++++ Y+++ +
Sbjct: 127 ISGIQHKYPDTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKE 186
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------ 195
+ +V+ TGGDP+I+S +RL + ++ L +H+Q +R ++ P R +
Sbjct: 187 VTDVVLTGGDPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDV 246
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + + +GK + + H H E A AI R+ + G L +QS LLK +ND
Sbjct: 247 LRLFEKIVYSGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSAR 306
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ + V L PYY+ +F + + +I + +SGL Q
Sbjct: 307 AWRKMWQMQVRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQ 360
>gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_APKG8I13]
Length = 449
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + L G+ H+Y + L C YC FCFR + ++ E + Y++
Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195
E +I +V+FTGGDP+I+ L K +++ +R ++ P + + +
Sbjct: 191 EHPEISDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250
Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
+ LK E+G + I H NH E S + I A+ R+ G + +QS LL IN
Sbjct: 251 ADETLKNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHIN 310
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD ++ A + + V L PYY+ +F + + + +KI ++SGL +
Sbjct: 311 DDTDMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTV 370
Query: 309 YILDLPGGYGKVKI 322
+ GKV +
Sbjct: 371 RGPSMSATPGKVHV 384
>gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 154
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I KE+ +++K+I+N Y + NLIN +PNDPI + IP + ELN D
Sbjct: 16 IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGS--WDASD 73
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + + G H+Y LL + VC YCRFCFR+ + S +S D + YI
Sbjct: 74 EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131
Query: 140 EKSQIWEVIFTGGDPLILSHKR 161
+ +I V+ TGGD LIL+ K+
Sbjct: 132 QTPEINNVLLTGGDSLILATKK 153
>gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 141
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G+N
Sbjct: 1 PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG P
Sbjct: 61 DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120
Query: 309 YILDLPGGYGKVKID 323
++ G K +D
Sbjct: 121 LAREIGGEPSKTPLD 135
>gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 594
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
D +G+ + SP I RYP +LK + CP C +C R + G + +
Sbjct: 277 DFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQRNWEIDEVMAPGAFAGMEKIKE 336
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ +I + I EV+ TGGDPL + ++ L ++++ + I V+ +R +R + P R
Sbjct: 337 AIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAAIPTVERIRLGTRTLVTMPMRFT 396
Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
L + +P V + H HPYE + E + A++RL GI + +Q V I+
Sbjct: 397 EGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAVNRLRQLGIPVYNQLVYTFFISR 456
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
E A L R I PYY + T +R+ I
Sbjct: 457 RFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493
>gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 450
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + L + C YC +CFR ++ E + Y+++
Sbjct: 131 LPGVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPA 190
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
+ +V+ TGGDP+I+S +RL+ L+ L + V+ +R ++ P R +P+ + L+
Sbjct: 191 VTDVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLR 250
Query: 202 ------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+G+ + + H +HP E +++A AA++R+ G ++ Q+ L+K +NDD +
Sbjct: 251 LFERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVW 310
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A++ R + + PYY+ +F++ + I + GL + +
Sbjct: 311 ADMWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMS 370
Query: 315 GGYGKVKID 323
GKV +D
Sbjct: 371 ATPGKVLVD 379
>gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437]
Length = 187
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 193 NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ EL+ L E +++ H NHP E +++A AI L AG+IL++Q+ +LKGIND
Sbjct: 6 DKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVLKGIND 65
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
DPEILA L+ + PYY AG + F LT E +++ K + SGL +
Sbjct: 66 DPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGLGK 122
>gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 105
Score = 83.6 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL+ L +L L IKHV+ LR HSR+PIV P RI EL+ ++ + +
Sbjct: 1 GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LA
Sbjct: 61 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104
>gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
Length = 481
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 43/302 (14%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109
+A++ K + PEE ED G+ + +SP+ G++H+Y + L+ ++ C +C
Sbjct: 88 LAKRSTAVKNLIKARPEEMEDLSGEADPSNQLKYSPIPGLLHKY-ELCLVYVVRTCSSWC 146
Query: 110 RFCFRREMVGSQKGTVLSS----KD------TEAALAYIQEKSQIWEVIFTGGDPLILSH 159
R+C+R + + + G +S KD + I K ++ EV+ +GGDP++LS+
Sbjct: 147 RYCYRSDFLTGKTGKDTASIHEVKDYIETHNAKVERGEITHKPKVREVLLSGGDPMVLSN 206
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK---EAGKPVYIA--IHAN 214
+ L L L V+++R ++ P+R + + L E V +A +H
Sbjct: 207 RNLFDYLNGLAEAG-VEVIRIGTKEMAFYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFT 265
Query: 215 HPYEFSEEAI--------------------AAISRLANAGIILLSQSVLLKGINDDPEIL 254
HP EF + AA A + L +Q+ ++ G+NDD + L
Sbjct: 266 HPDEFLRLDVNGDYVRDERGRPLRNPLVEQAATRLRARPFVTLENQTPIIDGVNDDADAL 325
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ + + + +Y G F + +E+ K+ A + +SG+ + + L
Sbjct: 326 RLMQQELKRMGVNNHYFFQCREIEGFRAFAVPVEKAWKLHAESQHGLSGIERSRFALSTE 385
Query: 315 GG 316
G
Sbjct: 386 AG 387
>gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 123
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%)
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L
Sbjct: 7 PVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSERSFAAG 66
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK
Sbjct: 67 VLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120
>gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 440
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 32/273 (11%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHV 104
+NPH P D ++ +PQ ++++ G+ H+Y + +L+ +
Sbjct: 111 LNPH-PGDQLSMN-VPQHDDIDG-----------------SGMQHKYAETLLVFPRQGQT 151
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C YC +CFR ++ EA Y+ I +V+ TGGDPL++ + L
Sbjct: 152 CHSYCGYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLAS 211
Query: 165 VLKTLRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHAN 214
L+ L +HV+ +R ++ P R+ PE L++ L AGK V + +H +
Sbjct: 212 YLEPLLEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLS 271
Query: 215 HPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
H E ++ A A++RLA+ G +L +Q+ +++ +NDDP A+L + V R+ PYY+
Sbjct: 272 HVAELQTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFV 331
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+F L + I +++SGL +
Sbjct: 332 ERDTGARPYFGLPLARAVDIYREALQRVSGLGR 364
>gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 125
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LANL + + PYYL
Sbjct: 8 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYL 67
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
H D G +HF +T +E ++I+ L +SG P ++ G K +D
Sbjct: 68 HVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 119
>gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 189
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
I +E+ +++ +I+N + L +LI+ ++PNDPI + IP + EL+ + D
Sbjct: 26 IPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDEY--GKWDASD 83
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ + + G H+Y LL + VC YCRFCFR+ + + +S D + YI+
Sbjct: 84 EYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVAPGVEYIR 141
Query: 140 EKSQIWEVIFTGG 152
+ QI V+ TGG
Sbjct: 142 KNPQINNVLLTGG 154
>gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 202
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 9 IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
PGG GK+ + + + + + ++ YP S
Sbjct: 69 APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108
>gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565]
gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565]
Length = 713
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 65/261 (24%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--------------PI 78
TP +L+N + ND R +I L NI E+ED P
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPD 301
Query: 79 GDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKD 130
G N H RYP+ +L + C C C F+ E + + T+ +
Sbjct: 302 GHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKES 354
Query: 131 TEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-------------- 172
E L Y +E +Q+ +++ TGGD L+ +K LQ +L + +
Sbjct: 355 WERKLRRLMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLDRPEG 414
Query: 173 ---KHVQILRFHSRVPIVDPQRINPELIQCLKE-------AG-KPVYIAIHANHPYEFSE 221
+Q +R SR+P P RIN EL++ L+E AG K I H P E +
Sbjct: 415 EKYAELQRVRLGSRLPAYLPMRINDELVEILREFKEKASAAGVKQFIIQTHFQTPLEVTP 474
Query: 222 EAIAAISRLANAGIILLSQSV 242
EA AI ++ +AG I+ +Q V
Sbjct: 475 EAKEAIRKILSAGWIITNQLV 495
>gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 107
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E S + +L+ GI LL+QSVLL+G+ND E LA L + + PYYLH D
Sbjct: 2 EISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDRV 61
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G +HF L + Q+I +L + G P + + G K +
Sbjct: 62 DGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106
>gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482]
gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 703
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I +L NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q +++ TGGD L+ +K L+ +LK + +
Sbjct: 354 LRKLMEYFENDTQFRDILITGGDALMSQNKTLRNILKAVYKMAVRKRNANLHRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL++ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 703
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I +L NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL++ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
Length = 576
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I +L NI E+ED + D + +
Sbjct: 107 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 166
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 167 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 226
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 227 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 286
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL++ L+E + I H P E + EA
Sbjct: 287 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 346
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 347 AIRKILAAGWTITNQLV 363
>gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 697
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I PQ E NI E+ED + D + +
Sbjct: 228 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 287
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 288 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 347
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 348 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 407
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL+ L+E + I H P E + EA
Sbjct: 408 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 467
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 468 AIRKILAAGWTITNQLV 484
>gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
Length = 703
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I PQ E NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL+ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 703
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I PQ E NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL+ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 703
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I PQ E NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL+ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510]
gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510]
Length = 703
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R +I +L NI E+ED + D + +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYPD +L + C C C R S++ L K++
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
+ Y + +Q+ +++ TGGD L+ +K L+ +L+ + +
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
+Q +R SR+P+ P RIN EL+ L+E + I H P E + EA
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473
Query: 226 AISRLANAGIILLSQSV 242
AI ++ AG + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490
>gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
Length = 105
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G SHF +
Sbjct: 7 AMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLI 66
Query: 286 TIEEGQKIVASLKEKISGLCQP 307
+ E +I +L+ SG P
Sbjct: 67 SDIEAMQIYKTLQSLTSGYLVP 88
>gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum]
Length = 276
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN------------------ILPEERE------- 75
V NLI+ N P+DP+ R PQ L+ I+ EE
Sbjct: 56 VAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIREEARKIQLRQN 115
Query: 76 -DPIGDN-------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTV 125
+P G + P G+ H+Y + +L L VC YC +CFR +
Sbjct: 116 PNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGVENLK 175
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
++ E + Y+++ ++ +VIFTGGDP+++S ++K+ T +
Sbjct: 176 FANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221
>gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
Length = 697
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86
+TP +L+NP + ND R +I PQ E I ERED + G N +
Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294
Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT-----E 132
I RYP+ +L + C C C R S++ L K+T
Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKETWEKKLR 354
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ +K L +L+ + + +
Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAIYRMAARKRKANQERPEGEKYAEL 414
Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227
Q +R SR+P P RIN EL++ L KE + I H P E + EA I
Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474
Query: 228 SRLANAGIILLSQSV 242
+L +AG ++ +Q V
Sbjct: 475 RKLLSAGWLITNQLV 489
>gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4]
gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 537
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G H+YP L+ K C +C +CFR V + + KD Y++ +
Sbjct: 202 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHKE 260
Query: 144 IWEVIFTGGDPLILSHKRLQKVLK------TLRYIKHVQI----LRFHSRVPIVDPQRIN 193
+ +++ TGGD + RL++ + +L ++K+V++ L F + + + +
Sbjct: 261 VTDILITGGDGGYMPMSRLKQYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPM 320
Query: 194 PELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN 248
EL +++ G + H + P E + +AAI RL N G+ + SQS ++ I+
Sbjct: 321 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHIS 376
>gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
Length = 697
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86
+TP +L+NP + ND R +I PQ E I ERED + G N +
Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294
Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTE 132
I RYP+ +L + C C C R S++ + K
Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLR 354
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ +K L +L+ + + +
Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAVYRMAARKRKANQERPEGEKYAEL 414
Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227
Q +R SR+P P RIN EL++ L KE + I H P E + EA I
Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474
Query: 228 SRLANAGIILLSQSV 242
+L +AG ++ +Q V
Sbjct: 475 RKLLSAGWLITNQLV 489
>gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3]
gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 493
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G H+YP L+ K C +C +CFR V + + KD Y++ +
Sbjct: 160 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHPE 218
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NP- 194
+ +++ TGGD + RL++ + L + HV+ +R +R P+ + P
Sbjct: 219 VTDILITGGDGGYMPVSRLRQYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPM 278
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
EL +++ G + H + P E + IAAI RL N G+ + SQS ++ I+
Sbjct: 279 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHIS 334
>gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
Length = 697
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGIV-- 90
TP +L+N P+ +D R +I PQ E I ERED + + + ++
Sbjct: 237 TPYYLSLLNCTPNGYDDEALRSYILYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPD 296
Query: 91 -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136
RYP+ +L + C C C F+ + + + T+ + E L
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRR 356
Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K L+ +L + + +Q
Sbjct: 357 LMNYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQ 416
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+P P RIN EL++ LK+ + I H P E + EA I
Sbjct: 417 RIRLGSRLPAYLPMRINDELVEILKKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIH 476
Query: 229 RLANAGIILLSQSV 242
+L +AG ++ +Q V
Sbjct: 477 KLLSAGWLIDNQLV 490
>gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
Length = 710
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 132/326 (40%), Gaps = 63/326 (19%)
Query: 5 HKTLTSAQDL--YNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH------NP-ND 54
H + SA DL Y A+ + ++ + ++E + I TP +LI+ NP +D
Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281
Query: 55 PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILL---K 100
R ++ ++L +I+ E+ED G+ N + P + RYP+ +
Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTV------LSSKDT-----EAALAYIQEKSQIWEVIF 149
+ C C +C R M Q G L K + E + Y + +W+++
Sbjct: 342 MGRACGGLCSYCQR--MYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILI 399
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQI-----------------LRFHSRVPIVDPQRI 192
TGGD + S K L+ +L + + +I +R +++P+ PQR+
Sbjct: 400 TGGDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRV 459
Query: 193 NPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
EL+Q L + K + H + E + E A+ RL +G + +Q V
Sbjct: 460 TAELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFT 519
Query: 245 KGINDDPEILANLMRTFVELRIKPYY 270
+ A L + ++ + PYY
Sbjct: 520 VAASRRGHS-AKLRKVLNDIGVLPYY 544
>gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
Length = 712
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV-- 90
TP +L+N + ND R +I L NI E+ED + + I+
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPD 301
Query: 91 -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
RYP+ +L + C C C F+ E + + T+ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN EL++ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDELVEILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057]
gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057]
Length = 698
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 44/214 (20%)
Query: 73 EREDPIGDNNHSPLKGIV-------HRYPDRILL---KLLHVCPVYCRFC-----FRREM 117
ERED + + + ++ RYP+ +L + C C C F+ +
Sbjct: 277 EREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKR 336
Query: 118 VGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI- 172
+ + T+ + E L AY +E +Q+ +++ TGGD L+ +K L+ +L + +
Sbjct: 337 LNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMA 396
Query: 173 ----------------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVY 208
+Q +R SR+P P RIN EL++ L+E +
Sbjct: 397 SRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEILREFKEKASTIGIRQFI 456
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
I H P E + EA I +L AG ++ +Q V
Sbjct: 457 IQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLV 490
>gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 720
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + T+ + ++ L
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 363
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 364 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 423
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN EL+ L+E K I H P E + EA AI
Sbjct: 424 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 483
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497
>gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 717
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + T+ + ++ L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN EL+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14]
gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14]
Length = 718
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + T+ + ++ L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN EL+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12]
gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 699
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTNGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2]
Length = 711
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
Length = 711
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
Length = 711
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23]
gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23]
Length = 713
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497
>gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 713
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497
>gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 713
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED + G N +
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497
>gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301]
Length = 699
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSS 128
P G N H RYP+ +L + C C C F+ E + + T+
Sbjct: 297 PDGHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPK 349
Query: 129 KDTEAALA----YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--------------- 169
+ + L Y +E +Q+ +++ TGGD L+ +K L+ +L+ +
Sbjct: 350 ESWDHKLRRLMNYFEEDTQLRDILITGGDALMSQNKTLRNILEAVCRMAGRKRRANARRP 409
Query: 170 --RYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEF 219
+Q +R SR+P P R+N EL++ L+E K I H P E
Sbjct: 410 DGEKYAELQRVRLGSRLPAYLPMRVNDELVEILREFHEKASAVGVKQFVIQTHFQTPLEV 469
Query: 220 SEEAIAAISRLANAGIILLSQSV 242
+ EA AI ++ +AG ++ +Q V
Sbjct: 470 TPEAEEAIRKILSAGWLITNQLV 492
>gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22]
gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22]
Length = 713
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED +G N +
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 712
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED +G N +
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
Length = 699
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I PQ E I ERED + G N +
Sbjct: 237 TPYYLSLLNCTGSGYNDDSLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPD 296
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTEA 133
I RYP+ +L + C C C R S++ K
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRR 356
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+ Y +E +Q+ +++ TGGD L+ +K L+ +L + + +Q
Sbjct: 357 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQ 416
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+P P RIN EL+ L+E + I H P E + EA I
Sbjct: 417 RIRLGSRLPAYLPMRINDELVDILREFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIR 476
Query: 229 RLANAGIILLSQSV 242
+L +AG ++ +Q V
Sbjct: 477 KLLSAGWLITNQLV 490
>gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H]
gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H]
Length = 555
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 86 LKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G H+YP I K C +C +CFR V + + K+ + Y++ +
Sbjct: 221 LDGSQHKYPQCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KEIDQIHRYLKVHEE 279
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPE----- 195
+ +++ TGGD + R ++ + L R + H++ +R +R P+ I
Sbjct: 280 VTDMLITGGDGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKM 339
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ + + G + H + P E + IAAI RL G+++ SQS ++ I+
Sbjct: 340 LAVFDKMHDNGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHIS 395
>gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A]
Length = 713
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
TP +L+N + ND R +I L NI E+ED +G N +
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + ++ + + L
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQ 421
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN L+ L+E K I H P E + EA AI
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481
Query: 229 RLANAGIILLSQSV 242
++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495
>gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
Length = 153
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+PNDP+ Q + E I P DP+ D + + G++H+Y +R LL + C V CR
Sbjct: 67 DPNDPLLLQVLTANAEFTITPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125
Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQE 140
+CFRR KG + + + A+ YI++
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKK 153
>gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
Length = 250
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203
PLI+ L++ ++ + I H++ +R ++ P R EL+ K +
Sbjct: 1 PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ G ++ +QS +L+ IND+P++ A + + V
Sbjct: 61 GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYY+ +F + I +I +K+SGL + + GK++I
Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180
Query: 323 DTHNIKKVGNGSYCITD 339
+ ++ Y + D
Sbjct: 181 --LGVSEINGKKYIVLD 195
>gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343]
gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 699
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46]
gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 699
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R]
Length = 699
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 699
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 699
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
TP +L+N ND R +I L NI ERED + G N +
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ E + + + + + L
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
+Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+ P RIN ELI+ L+E K I H P E + AI
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478
Query: 229 RLANAGIILLSQSV 242
++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492
>gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
Length = 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 174 HVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI- 224
H++ +R ++ P R + EL+Q K ++GK + I H H E
Sbjct: 22 HIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSGKSLAIMAHFTHWRELEAPLTQ 81
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
AI ++ + G I+ SQS ++ IN++PE L V+L I PYY+ +F+
Sbjct: 82 VAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQLGIIPYYMFVERDTGSNRYFQ 141
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + E I ++SGL + + YGK+++
Sbjct: 142 VPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEV 179
>gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36]
gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36]
Length = 698
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
TP +L+N +D R +I PQ E I ERED + G N +
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ + + + T+ + E L
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K L +L + + +Q
Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+P P RIN L++ L+E + I H P E + EA I
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476
Query: 229 RLANAGIILLSQSV 242
+L AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490
>gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
Length = 698
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
TP +L+N +D R +I PQ E I ERED + G N +
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
I RYP+ +L + C C C F+ + + + T+ + E L
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356
Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
AY +E +Q+ +++ TGGD L+ +K L +L + + +Q
Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------IAIHANHPYEFSEEAIAAIS 228
+R SR+P P RIN L++ L+E + I H P E + EA I
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIR 476
Query: 229 RLANAGIILLSQSV 242
+L AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490
>gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5]
Length = 698
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQI 177
+ Y +E +Q+ +++ TGGD L+ +K L +L+ + + +Q
Sbjct: 359 MTYFEEDTQLRDILITGGDALMSQNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQR 418
Query: 178 LRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAISR 229
+R SR+P P RI+ L++ L+E + I H P E + EA AI R
Sbjct: 419 VRLGSRLPAYLPMRIDDGLVEVLREFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRR 478
Query: 230 LANAGIILLSQSV 242
+ AG ++ +Q V
Sbjct: 479 ILAAGWLVTNQLV 491
>gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 237
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C
Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134
Query: 113 FRR 115
FRR
Sbjct: 135 FRR 137
>gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 698
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 51/254 (20%)
Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
TP +L+N +D R +I PQ E I ERED + G N +
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296
Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136
I RYP+ +L + C C C F+ + + + T+ + E L
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356
Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
Y +E +Q+ +++ TGGD L+ +K L +L + + +Q
Sbjct: 357 LMDYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
+R SR+P P RIN L++ L+E + I H P E + EA I
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476
Query: 229 RLANAGIILLSQSV 242
+L AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490
>gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 707
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R ++ L I ERED + + + +
Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYP+ +L + C C C R S++ L K+
Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173
+ Y + +QI +++ TGGD L+ + L+ +L +
Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225
+Q +R +R+P+ P R++ EL+ L+ EAG +++ H P E + E+
Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472
Query: 226 AISRLANAGIILLSQSV 242
AI R+ + G + +Q V
Sbjct: 473 AIRRILSTGWAVTNQLV 489
>gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3]
gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3]
Length = 704
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ VL K++
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLR 363
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498
>gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 707
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
+ +TP +L+NP +D R ++ L I ERED + + + +
Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292
Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
+ RYP+ +L + C C C R S++ L K+
Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352
Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173
+ Y + +QI +++ TGGD L+ + L+ +L +
Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225
+Q +R +R+P+ P R++ EL+ L+ EAG +++ H P E + E+
Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472
Query: 226 AISRLANAGIILLSQSV 242
AI R+ + G + +Q V
Sbjct: 473 AIRRILSTGWAVTNQLV 489
>gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
Length = 456
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 39/182 (21%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
H C C FCF +M + T L KD + L+++Q G+ + L++
Sbjct: 89 HSCRNRCIFCFIDQMPPGMRKT-LYFKDDDTRLSFLQ------------GNYVTLTN--- 132
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+ + QILR+H + Q +NP+L +C K G F+ E
Sbjct: 133 ------IGEMDMEQILRYHLSPINISFQTMNPQL-RC-KMLGN------------RFAGE 172
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
A+ + RLA AGI + Q VL KG+ND E+ ++ + R PY + G +
Sbjct: 173 ALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGLTR 229
Query: 283 FR 284
FR
Sbjct: 230 FR 231
>gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19]
gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19]
Length = 704
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ L K++
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498
>gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC
8503]
gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 704
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ L K++
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498
>gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 704
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ L K++
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498
>gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 704
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ L K++
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498
>gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7]
Length = 706
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
+TP +L+N + +D R +I EL +I E+ED + + + ++
Sbjct: 246 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 305
Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
RYP+ +L + C C C R S++ L K++
Sbjct: 306 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 365
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+K+L+ + + +
Sbjct: 366 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 425
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI
Sbjct: 426 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 485
Query: 228 SRLANAGIILLSQSV 242
+ AG + +Q V
Sbjct: 486 EAILAAGWTITNQLV 500
>gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
Length = 703
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86
+TP +L+N + +D R +I EEL I E+ED + G N +
Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302
Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132
I RYP+ +L + C C C F+ E + S K K
Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKETWDKKLR 362
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L+ +L + + +
Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLRNILDAVYKMAVRKRKANESRPEGEKYAEL 422
Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227
Q +R SR+ P RI EL+ L+ G + I H P E + EA AI
Sbjct: 423 QRVRLGSRLLAYLPLRITDELVGILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482
Query: 228 SRLANAGIILLSQSV 242
+ +AG I+ +Q V
Sbjct: 483 EAILSAGWIITNQLV 497
>gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
Length = 703
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 51/255 (20%)
Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86
+TP +L+N + +D R +I EEL I E+ED + G N +
Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302
Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132
I RYP+ +L + C C C F+ E + S K K
Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLR 362
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
+ Y +E +Q+ +++ TGGD L+ + L +L + + +
Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLCNILDAVYKMAVRKRKANESRPKGEKYAEL 422
Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227
Q +R SR+ P RI EL+ L+ G + I H P E + EA AI
Sbjct: 423 QRVRLGSRLLAYLPLRITDELVDILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482
Query: 228 SRLANAGIILLSQSV 242
+ +AG I+ +Q V
Sbjct: 483 EAILSAGWIITNQMV 497
>gi|312129610|ref|YP_003996950.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
byssophila DSM 17132]
gi|311906156|gb|ADQ16597.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
byssophila DSM 17132]
Length = 376
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
YC F F ++ K K+ E +Y+ EK+ + + F GG P +LS+ L+KVLK
Sbjct: 16 YCDFHFSTQLSYKAKMVDAMCKEIELNSSYLVEKN-LETLYFGGGTPSLLSNSELEKVLK 74
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+++Y H + +P I+P+ +Q KE G
Sbjct: 75 SIQY--HYSLENIKEFTLEANPDDIHPDRLQLWKELG 109
>gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
Length = 309
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 19 LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74
+ +++ I+++KE SI L P + ++I+ NP DPI RQFIP K +L P+
Sbjct: 213 VTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPKVE 272
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILL 99
D + +++ SP++G VHRY D+ L
Sbjct: 273 LDSLHESDDSPVEGFVHRYYDKALF 297
>gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 81
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
++E I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 2 QDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQ 60
Query: 124 TVLSSKDTEAALAYIQEKSQIWE 146
+ ++ + AL Y+ ++ E
Sbjct: 61 G--NKRNWQTALEYVAAHPELDE 81
>gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
Length = 309
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 96 RILLKLLHV----CPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ +V C C FC G Q+ G+ L+++D E A +Y+ K +++
Sbjct: 8 RPFLKMRYVVDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKL 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
TGG+PL+ + + K+++ + + + V I + + L +AG + +
Sbjct: 64 TGGEPLL--RRDIDKIVEAIARV---------AAVSITTNGLLLRRWVDRLYKAGLRKIN 112
Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
++IH P ++S+ E + + N G+ + +V+L+GIN D + + L+
Sbjct: 113 VSIHTADPEKYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELV 172
Query: 259 RTFVEL 264
+ L
Sbjct: 173 KLAASL 178
>gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712]
Length = 431
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 33/272 (12%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
ER DP + G+ HRYP+ +L+ C C C R
Sbjct: 95 RERLDPHPAGRDA--AGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRFAGDPVRGRELG 152
Query: 130 DTEAALAYIQEKSQIWEVIFTG-----GDPLILSHKRLQKVLKTLRYIKHVQIL------ 178
EA + +I +V+F G G L+T R +V L
Sbjct: 153 GPEALGDRLDRHPEITDVLFAGVPFAGGSGADPPDPPDPFELRTARLAPYVTALLDRPGV 212
Query: 179 -------RFHSRVP--IVDPQRINPELIQCLKE---AGKPVYIAIHANHPYEFS-EEAIA 225
R SR P +D + +L++ L+ +G+ + + ++ HP E A
Sbjct: 213 RTVRIVTRAVSRFPGRFLDAPDAD-DLLRLLERVVASGRHLVLTLYVCHPRELRPATARR 271
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ RLA G +L ++ +L+ +NDD + A + R L + PY + FRL
Sbjct: 272 ALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVERGGGVRRCFRL 331
Query: 286 TIEEGQKIVASLKEKISGL----CQPFYILDL 313
+ ++ A ++ GL C P +L
Sbjct: 332 PLARVLEVHAEALRRVPGLAGRVCGPVMPTEL 363
>gi|40217429|emb|CAE46362.1| hypothetical protein C2_0004 [uncultured archaeon]
gi|268323812|emb|CBH37400.1| hypothetical protein, radical SAM superfamily [uncultured archaeon]
Length = 317
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
+L C +CR CFR G GT+LS ++T A A ++ ++ + + TGG+P L
Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
+ L ++K L +I+ + I + N LKEAG K
Sbjct: 78 DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKEAGLTEAHIDIKAFSD 135
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
IH + + ++ + A+ L + G+ LL Q+V + GI D EI L+N+ + ++
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSNIK 194
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
LRI P+ P A R TIE+ ++
Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220
>gi|148270145|ref|YP_001244605.1| ribosomal RNA large subunit methyltransferase N [Thermotoga
petrophila RKU-1]
gi|281412513|ref|YP_003346592.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10]
gi|205829917|sp|A5ILF6|RLMN_THEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|147735689|gb|ABQ47029.1| radical SAM enzyme, Cfr family [Thermotoga petrophila RKU-1]
gi|281373616|gb|ADA67178.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10]
Length = 343
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 43/213 (20%)
Query: 82 NHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEA 133
+ + ++ ++ +PDRI + CPV C FC F R + + + S + E
Sbjct: 86 DGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKE- 144
Query: 134 ALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
EK +I V++ G G+PL+ + +K++R + H ++ R + I
Sbjct: 145 ------EKKKIGNVVYMGMGEPLL----NYENTIKSIRTLNHKKMGNIGIRRITISTVGI 194
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------AISRLANA--------GIILL 238
+IQ L E G V +A+ + P F + + +I + NA G +
Sbjct: 195 PDRIIQ-LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQKKTGNRVT 253
Query: 239 SQSVLLKGINDD-------PEILANLMRTFVEL 264
+ VL+KG+ND+ EIL N M+ FV L
Sbjct: 254 IEYVLIKGMNDEISDAKKLAEILKN-MKVFVNL 285
>gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 457
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 45/244 (18%)
Query: 24 QIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEELNI----LPEEREDPI 78
+I E++E S + P I +N H D I Q+ E+ + L + +
Sbjct: 20 RILEVEEYSPAFDAGFEPGCIVTAVNGHPLRDMIDWQWYSDGYEVELSYIDLDGDEGTVV 79
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ GI D + + VC C FCF R M+ + L +D + L+++
Sbjct: 80 LEREEGESWGITF---DGAIFDGIRVCRNACMFCFMR-MLPKESRDTLMLRDDDWRLSFL 135
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
Q FT L L +I H V P R++ +
Sbjct: 136 QGN-------FT--------------TLTNLSEEDADEITERH-----VSPLRVS---LH 166
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
C+ + I HA+H + + +L GI L Q VLL G+ND E++ L
Sbjct: 167 CISPEVRSKMIGRHADH-------GVRMMEKLLAGGIELYMQIVLLPGVNDGAELMKTLA 219
Query: 259 RTFV 262
++
Sbjct: 220 WAYL 223
>gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
Length = 320
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 99 LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C + C FC +E K +L+ ++ E + I K + +V TGG+PL+
Sbjct: 15 ISLTDRCNLRCNFCMPPGKEYNFLPKRQLLTPEEIEEYVK-IFAKLGVEKVRLTGGEPLL 73
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
+ L+++++ + ++ ++ + + + E ++ LKEAG K + +++H+ +
Sbjct: 74 --REDLEEIIQRISKVEGIKDIALTTNGVFL------KERLKALKEAGLKRITVSVHSLN 125
Query: 216 PYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
P + + E I R G + SV++KG NDD EIL +L R F L +
Sbjct: 126 PEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD-EIL-DLARFFKNLGV 183
Query: 267 KPYYLHHPDLAA 278
++ + D+
Sbjct: 184 TLRFIEYMDVGT 195
>gi|255568836|ref|XP_002525389.1| catalytic, putative [Ricinus communis]
gi|223535352|gb|EEF37027.1| catalytic, putative [Ricinus communis]
Length = 861
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
C + C+FC+ M + T D A + I V+F G G+PL +
Sbjct: 190 CAMNCQFCYTGRMGLKRHLTTAEIVDQVVSAQRLLTSDAGSITNVVFMGMGEPL----QN 245
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
++ V+K + H Q L F R + + P+L + L+E+ +A+ N +
Sbjct: 246 IENVIKAADIMVHDQGLHFSPRKVTISTSGLVPQLKRFLRESN--CALAVSLNATTDEVR 303
Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGIND---DPEILANLMR 259
I I+R N G++L L + V+L G+ND D E L++L++
Sbjct: 304 NWIMPINRKYNLGLLLDTLRKELHFKNNYKVLFEYVMLAGVNDSLEDAERLSDLVQ 359
>gi|52549924|gb|AAU83773.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos33H6]
Length = 317
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
+L C +CR CFR G GT+LS ++T A A ++ ++ + + TGG+P L
Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
+ L ++K L +I+ + I + N LK+AG K
Sbjct: 78 DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKDAGLTEAHIDIKAFSD 135
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
IH + + ++ + A+ L + G+ LL Q+V + GI D EI L+N+ + ++
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGVELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSDIK 194
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
LRI P+ P A R TIE+ ++
Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220
>gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
Length = 318
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + +C + C +C E V ++ T LS ++ EA L I ++ TGG+PL+
Sbjct: 14 ISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEA-LVRAGADMGIDKIRLTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
+ + ++K L I ++ + ++ PE+ LK AG + V I++ P
Sbjct: 73 AG--VLDLVKKLGAIPGIRDFAMTTNGILL------PEMAADLKAAGLRRVNISLDTFDP 124
Query: 217 YEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP-EILANLMRTF-VELR 265
+++ E+A+A I AG+ L +VL+KG NDD E + +T VE+R
Sbjct: 125 EKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDDEIEAFVHYTKTRPVEVR 184
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---ILDLPGGYGKVKI 322
++ L G + G+ ++A + E + P + LPG GKV +
Sbjct: 185 ----FIELMPLGDGAEYAFGQYMPGEAVLARVPELVPAASPPGAPARLCTLPGALGKVGL 240
>gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
Length = 444
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 52/164 (31%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ H C C FCF +M + T L KD ++ L+++Q G+ + L
Sbjct: 83 LMDEYHSCCNKCMFCFIDQMPPGMRDT-LYFKDDDSRLSFLQ------------GNYITL 129
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
++ R + + + ++Y H+ P+ I++H +P
Sbjct: 130 TNMRDKDIERVIKY--HLS-----------------------------PINISVHTTNPE 158
Query: 218 --------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
F+ + + I R AGI + SQ VL +G+ND+ E+
Sbjct: 159 LRCKMLHNRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLNDEEEL 202
>gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 452
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQ-KEELNILPEE----REDPIGDNNHSPLKGIVHRY 93
L+ I +++N H D + Q I +E+N L +E EDP+ +N++ P +G+V
Sbjct: 36 LSLSIEDILNKHR--DIYSEQEITGVCDEINELRKEGLLFSEDPLQNNDYLPGEGVVKA- 92
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFT 150
+ L L H C + CR+CF + ++ + A+ ++ + S + EV F
Sbjct: 93 ---LCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVGKKAMEFLIKSSGSRRNIEVDFF 149
Query: 151 GGDPLILSHKRLQKVL 166
GG+PL ++ K LQ ++
Sbjct: 150 GGEPL-MNFKVLQDLV 164
>gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
Length = 482
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 37/232 (15%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-----GT 124
L +E D I NNH H++ RI + + C + C +C R+ ++
Sbjct: 14 LQQEVMDKI--NNHPCYSEGAHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSA 71
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV---QILRFH 181
LS +D + Y+ Q V+ G L++ + K T R + Q L
Sbjct: 72 KLSPEDAVKKVLYVGGDIQQLSVVGIAGPGDALANPK--KTFDTFRMLHEKAPDQKLCLS 129
Query: 182 S---RVPI---------VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS--------E 221
+ R+P VD + + E G +Y +H NH F E
Sbjct: 130 TNGLRLPDYVDEMVKYNVDHVTVTINSVDPTGEIGAKIYPWVHWNHEKVFGAEGAKILLE 189
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+ + I L GI++ + SVL+ G+ND L N+ + EL + +LH+
Sbjct: 190 QQLKGIKMLTERGILVKANSVLIPGVNDKE--LVNVAKKLKELNV---FLHN 236
>gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
Length = 345
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157
CP CRFC + ++ G + E YIQ E +I V+F G G+PL+
Sbjct: 110 CPAGCRFC-----LTAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVVFMGMGEPLL- 163
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213
V K + + H +L +R V I P + + KE K + +++HA
Sbjct: 164 ---NFDNVKKAVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVKLAVSLHATTD 220
Query: 214 ---------NHPYEFSEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMR 259
N Y E +AA+ R A+ ++ + V+LKG+ND E L++
Sbjct: 221 EVRNMLVPLNRKYPIGE-IMAALRRYPADNNRRIMIEYVMLKGVNDSLEDARRLVK 275
>gi|161527549|ref|YP_001581375.1| radical SAM protein [Nitrosopumilus maritimus SCM1]
gi|160338850|gb|ABX11937.1| Radical SAM domain protein [Nitrosopumilus maritimus SCM1]
Length = 237
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + L L CP C +C +E + GT S +D L K+Q ++V FTGG
Sbjct: 19 YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGTEYSIEDANQ-LIDSNLKNQTYKVNFTGG 77
Query: 153 DPLI------LSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
DPLI L K +Q K + T I RF+ +P +D +I
Sbjct: 78 DPLIQHQAVALLAKHIQEKKIPTYLESSCFDIDRFNHVLPFIDIVKI 124
>gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
Length = 336
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFT 150
R D + L + C + C +C EM K +LS ++ +AA A+++ I ++ T
Sbjct: 18 RSVDYLRLSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVELG--IRKIRLT 75
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
GG+PLI + + K++ +L + + L + ++ P + Q LK+AG + I
Sbjct: 76 GGEPLI--RRDILKLVSSLSALPGLDELTMTTNGLLL------PTMAQPLKDAGISRLNI 127
Query: 210 AIHANHPYEFSE-----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
++ + F + E I A + + I L +V+L G NDD I +L
Sbjct: 128 SVDSLKAERFKQLTRVGDLSQVLEGIHAANAVGFGKIKL--NAVILAGFNDDEVI--DLA 183
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
R V+ + ++ L +SH R+ +
Sbjct: 184 RFAVDNGMDISFIEEMPLGEISSHKRVNTQ 213
>gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp.
SR1/5]
Length = 462
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 38/150 (25%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C C FCF +M + T L KD ++ L+++Q G+ + L++ +
Sbjct: 92 CSNKCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSEKD 138
Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+ + +RY H++ PI + Q +NPEL +C +H F+ +A
Sbjct: 139 IERVIRY--HLE--------PINISFQAMNPEL-RCK---------MLHNR----FAGKA 174
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + L NAGI + Q VL KG+ND E+
Sbjct: 175 LDKVDMLYNAGITMNGQIVLCKGVNDGDEL 204
>gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 67
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL
Sbjct: 17 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALL 64
>gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
Length = 322
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDPLIL 157
L + VC C +C G LS+ + EAA+ + Q +Q ++ TGG+P +
Sbjct: 15 LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGTQ--KIRLTGGEPGLR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
S L +++ L I + + + + P+ IQ +AG + ++I +
Sbjct: 73 SD--LPEIIYRLNRIDGI------NNIAVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDS 124
Query: 217 YEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELRI 266
F E E + +++ G+ + +VL+KG+NDD +L L +T V LR
Sbjct: 125 STFHEITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLRF 183
>gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
obeum A2-162]
Length = 460
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 38/154 (24%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C +C FCF +M + T L KD ++ L+++Q G+ + L++ +
Sbjct: 90 CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 136
Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+ + ++Y H+ PI V Q +NP+L +C +H F+ +A
Sbjct: 137 IERVIKY--HLS--------PINVSFQAMNPKL-RCK---------MLHNR----FAGDA 172
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + RL AGI + Q VL KG+ND E+ +L
Sbjct: 173 LKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSL 206
>gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum
ferrodiazotrophum]
Length = 464
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 12/78 (15%)
Query: 195 ELIQCLKEAGKPVYIAIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ ++ L++ P+YI++HA P + +++ + + RL N GI L +Q VL+ G
Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207
Query: 247 INDDPEILANLMRTFVEL 264
IND L+RT+ +L
Sbjct: 208 INDG----EALLRTWKDL 221
>gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 275
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAG 204
P++ H L I VQ+L H PI+ + I+ E + LK AG
Sbjct: 68 PIL--HPSL---------INFVQLLSEHKNYPIIATNAVDISYEYLYQLKSAG 109
>gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
Length = 463
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTV---LSSKDTEAALAYIQEKSQIWEVIFT 150
PD ++L L C + C++C+ + S G + + K + + EK Q + +IF
Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPGIMKYEIGKKAIDFIAEFCGEKEQ-FNIIFF 161
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GG+PL + ++L+K+++ Y+
Sbjct: 162 GGEPL-MDFRKLKKLVEYAEYV 182
>gi|302388629|ref|YP_003824450.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
gi|302199257|gb|ADL06827.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
Length = 203
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 93 YP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVI 148
YP D + L + + CP C FC R+ G + + K+ T+ + I + S EV+
Sbjct: 6 YPIGDSLYLNITNRCPNRCSFCIRQLGDGIEGYNLWLDKEPTTKEIIEAIGDPSGYREVV 65
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIK 173
F G G+PL+ RLQ VL RY+K
Sbjct: 66 FCGYGEPLM----RLQVVLDVARYLK 87
>gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
Length = 472
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGG 152
+ ++L + +C + C +C+ ++ + G ++S + AL AY + + + F GG
Sbjct: 78 EDLVLNISQICNLACSYCYADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGG 135
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P L+ + ++ ++ I + R S V + + +IN E+ Q A K Y+ +
Sbjct: 136 EP-TLAFEEIKYAVEYAETICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVS 192
Query: 213 ANHP 216
+ P
Sbjct: 193 MDGP 196
>gi|303239826|ref|ZP_07326349.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acetivibrio cellulolyticus CD2]
gi|302592536|gb|EFL62261.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acetivibrio cellulolyticus CD2]
Length = 227
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 93 YPDRILLKLLH-VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP ++ L C + C +C R +V +G + D + L++++++ E V+ +
Sbjct: 14 YPGKMCAVLFTPGCNMDCFYCHNRALV---EGGHENITDADEVLSFLEKRKGFLEGVVVS 70
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P LQK L L ++K V+ L + ++ D NP++++ + G YIA
Sbjct: 71 GGEPT------LQKGL--LPFLKDVKRLGYSIKL---DTNGTNPDVVENVLHKGLIDYIA 119
Query: 211 IHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGIN 248
+ PYE E + ++ L N+GI ++ L G++
Sbjct: 120 MDFKAPYEKYNEICRTEVDIGNVMRSVDLLINSGIDYEFRTTLAPGLD 167
>gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1]
gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1]
Length = 465
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 39/187 (20%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T L KD ++ L+++Q G+ + L
Sbjct: 82 LMSEYRSCHNKCIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITL 128
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
++ + + + I+RFH + Q +NP+L +C +
Sbjct: 129 TNMKDKDFER---------IIRFHLAPINISVQTMNPKL-RCRMLNNR------------ 166
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
F+ EA+ I RL AGI + Q VL KG+ND E+ ++ R PY +
Sbjct: 167 -FAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVVP 222
Query: 278 AGTSHFR 284
G S +R
Sbjct: 223 VGLSRYR 229
>gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
Length = 441
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGD 153
I L + HVC + C +CF + + ++ K AA+ Y+ K+ + ++F GG+
Sbjct: 90 IELHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGE 149
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P++ ++ L + KT+ Y + R + + +N I+ KE G + +++
Sbjct: 150 PML--NEPL--IWKTVDYAESAHPKRRFTYSITTNGTLLNDRAIEAFKEHGFSILVSLDG 205
Query: 214 -------NHPYEFSEEAIAAISR 229
+ PY+ + A I R
Sbjct: 206 VGCKHDESRPYKNGRGSFADIER 228
>gi|52549689|gb|AAU83538.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos30H9]
Length = 317
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
+L C +CR CFR G GT+LS ++T A A ++ + + + TGG+P L
Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGTLPTKAMITGGEP-TL 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
+ L ++K L +I+ + I + N LK+AG K
Sbjct: 78 DKEFLLTLVKGLEEKGFKEIILMSNGYEI--GREGNDNYAAELKDAGLTEAHIDIKAFSD 135
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-----ILANLMRTFVEL 264
IH + + ++ + A+ L + G+ LL Q+V + GI D E I + + + ++
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSDVNSNIKF 195
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
RI P+ P A R TIE+ ++
Sbjct: 196 RINPF---APSFAFERVTERPTIEDMER 220
>gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
Length = 324
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K I R D + + + C + CR+C ++ + +LS E L+ + + +
Sbjct: 1 MKDIYGRTIDYMRISVTDRCNLRCRYCMPEDIPSVEHTDILS---YEELLSICESAADLG 57
Query: 146 EVIF--TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
F TGG+PL+ K ++ L+ + V+ + S +++P ++ LKEA
Sbjct: 58 ICKFKITGGEPLV--RKGCAGFIERLKQLPGVRQVTLTSNGLLLEP------YLERLKEA 109
Query: 204 G-KPVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
G + I++ ++ E ++A+ A G+ V++KGINDD EIL
Sbjct: 110 GIDGINISLDTLDEKKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EIL 168
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-------- 306
+L+ E + ++ + GT + +E I++ L++ G+ +
Sbjct: 169 -DLLEIGREDHVDIRFIEMMPIGFGTQFTGMNSDE---IISLLRQTYPGIKKEEQIRGNG 224
Query: 307 PFYILDLPGGYGKV 320
P L +PG G V
Sbjct: 225 PARYLKIPGFSGAV 238
>gi|312623314|ref|YP_004024927.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203781|gb|ADQ47108.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor kronotskyensis 2002]
Length = 231
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ E+V + KG + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P E FS ++ I +I L N+ I ++ + K ++ +IL N+ R
Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIIRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177
Query: 262 VELR---IKPY 269
+ R IKPY
Sbjct: 178 KDSRLYIIKPY 188
>gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
Length = 468
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 38/156 (24%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C +C FCF +M + T L KD ++ L+++Q G+ + L++ +
Sbjct: 98 CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 144
Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+ + ++Y H+ PI V Q +NP+L +C +H F+ +A
Sbjct: 145 IERVIKY--HLS--------PINVSFQAMNPQL-RCK---------MLHNR----FAGDA 180
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ + +L AGI + Q VL KG+ND E+ +L +
Sbjct: 181 LKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216
>gi|70607223|ref|YP_256093.1| molybdenum cofactor biosynthesis protein A [Sulfolobus
acidocaldarius DSM 639]
gi|76363232|sp|Q4J8T0|MOAA_SULAC RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|68567871|gb|AAY80800.1| molybdenum cofactor biosynthesis protein A [Sulfolobus
acidocaldarius DSM 639]
Length = 313
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K + R + + + L H C C FC M G G L S D + +A I + I
Sbjct: 1 MKDVYGRELEDLRITLTHACNFTCFFC---HMEGENDGDSLLSADQISLVAQIGMEFGIR 57
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
V TGG+P + + L +++ L K V I V + + EL LK+AG
Sbjct: 58 TVKLTGGEPTL--RRDLPEIISKL---KEVGI----KEVSMTTNGYLLKELAGKLKDAGL 108
Query: 205 KPVYIAIHANHPYEFSE 221
V I++H+ P F E
Sbjct: 109 DRVNISLHSIDPVIFKE 125
>gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HdN1]
gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HdN1]
Length = 332
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
N+ +PL R + L + C C +C +M + VLS ++ + +A +
Sbjct: 2 NSSTPLIDAFGRKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQ-TIAAVFV 60
Query: 141 KSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++ TGG+PL+ L + L L +K + + +++ +L +
Sbjct: 61 GLGVTKIRLTGGEPLVRKDCVSLVRGLSELEGLKEITLTTNGNQL---------AQLAKP 111
Query: 200 LKEAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGIND 249
LKEAG + I++ + +P +F + +A I +AG +V++KG ND
Sbjct: 112 LKEAGLGRINISLDSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLNAVIMKGRND 171
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
D EI+A L V + Y+ L G +H R
Sbjct: 172 D-EIIA-LAEYAVSKGVDITYIEEMPLGEGINHDR 204
>gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
Length = 334
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
PLK R D I + + C + C +C E + Q + S + AA+ + +
Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPMGV 63
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V TGG+PL+ K L+ +++ + I+ +Q + + ++ P + LKEAG
Sbjct: 64 SKVRLTGGEPLV--RKDLENLVRMIASIEGIQDISLTTNGIML------PSKARLLKEAG 115
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
+ I++ + H EE A I+R + +L VL+KG N+
Sbjct: 116 LTRINISLDSLH-----EERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNE 170
Query: 250 D 250
D
Sbjct: 171 D 171
>gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis
Il1403]
gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403]
Length = 275
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
P++ H +L I VQ+L H P + ++ E + LK AG
Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYEYLYQLKSAG 109
>gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4]
gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4]
Length = 419
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
G++ R + I ++ + C + C FC E S+ + D + + + E ++I
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167
Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
E G G+PLI + ++ VQ LR H V ++ Q + +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216
Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
L EAG V ++IH+ P Y+ E + L NAGI +L V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-EHVLEMAEALVNAGIDVLIAPVIIFG 275
Query: 247 INDD 250
INDD
Sbjct: 276 INDD 279
>gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
Length = 362
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 36/201 (17%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD- 130
PI D+ PL+ + DR C + CR+C RE+ G + +L+ ++
Sbjct: 4 PIRDSLGRPLRDLRISVTDR--------CNMRCRYCMPREIFGPNFTFLPRSELLTFEEI 55
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
T A A+I ++ + ++ TGG+PL+ + L +++ L + V L + ++
Sbjct: 56 TRIAAAFI--RAGVRKIRLTGGEPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLL--- 108
Query: 191 RINPELIQCLKEAG-KPVYIAIHANHPYEFSEEA---------IAAISRLANAGIILLS- 239
+ L++AG + V +++ +P FS A +A I +AG +
Sbjct: 109 ---ARYARPLRDAGLRRVTVSLDTLNPATFSRLADTDIPLDNVLAGIDAAQSAGFFPIKL 165
Query: 240 QSVLLKGIND-DPEILANLMR 259
+V+ +G+ND D E LA R
Sbjct: 166 NAVIRRGVNDGDVEELAAFAR 186
>gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
Length = 333
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 50/276 (18%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P + N + L R D + + + C + C +C + E +K L + T A +
Sbjct: 3 PDSEQNRAALTDRFGRTIDYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIE 62
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ + I +V FTGG+PL+ H + ++++ + + ++F + ++D R EL
Sbjct: 63 VLAQMG-IRKVRFTGGEPLL--HPDIVELVRRAKATPGIDTVKFTTNGILLD--RYLDEL 117
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-----AIAAISRLANA-GIILLSQSVLLKGINDD 250
I + + A + + AA+ RL + + + +++L+GIN+D
Sbjct: 118 IAAGLDGINLSLDTLDAQKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177
Query: 251 --PEILANLMRT------FVELRIKPY---------------------YLHHPDLAAGTS 281
P+ + L R+ F+EL +P+ + H+P L A T
Sbjct: 178 EIPDFV-ELTRSHKLNVRFMEL--QPFDDQQIWRTGKFMGAEMIREQLFQHYPQLEAVTG 234
Query: 282 H------FRLTIEEGQ-KIVASLKEKISGLCQPFYI 310
FRL+ +G I+ + G C I
Sbjct: 235 RDTEHYSFRLSNYQGSIAIIPAFSRNFCGSCSRLRI 270
>gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
Length = 326
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 27/173 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+R D + + L C + C +C E + L D A LA I + + ++ T
Sbjct: 7 NRVHDYLRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRLT 66
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG-K 205
GG+PL+ K K++ +L SR+P+ N E L+EAG +
Sbjct: 67 GGEPLV--RKDAAKIILSL------------SRLPVELTMTTNGARLHEFADVLEEAGIR 112
Query: 206 PVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ I++ +F + + I L N GI + V++KG+ND+
Sbjct: 113 SLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165
>gi|307824586|ref|ZP_07654810.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum
SV96]
gi|307734240|gb|EFO05093.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum
SV96]
Length = 375
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +L +L + CP+ C +C + + + L ++D + L ++ + ++ F+GG+
Sbjct: 12 PRWLLAELTYACPLQCPYC-SNPIDYATYQSELDTEDWKRVLTQARKMGAV-QLGFSGGE 69
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
PL +K L L +KH + L ++S + I + E I LKEAG + ++I
Sbjct: 70 PLT------RKDLPEL--VKHARDLGYYSNL-ITSGYGLTEEKIVQLKEAGLDHIQVSIQ 120
Query: 213 ANH-----------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA---NLM 258
A+ ++ +E + + + ++L + + I+ PEILA L
Sbjct: 121 ASSQELNDHIAGTASFQHKKEVAHLVKK--HGYPMVLCVVIHRENIHQMPEILAMAEELG 178
Query: 259 RTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
++EL YY + DL T + E+ ++I + KEK++G + +Y++
Sbjct: 179 ADYLELANTQYYGWAHANRDLLLPT---KEQFEQAEQIAQAFKEKVAGKMKIYYVV 231
>gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
Length = 341
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 38/191 (19%)
Query: 89 IVHRYPDRILLKLL----HVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+V RY R LKL VC C FC F ++ G + L + D L + K
Sbjct: 29 LVDRY-GRPFLKLRVAVNDVCNFSCIFCHFEGQLRGVGR---LLNADDYGFLVDVLSKVG 84
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-----VDPQRINPELIQ 198
+ + TGG+PL+ S V I+R +R + + R+
Sbjct: 85 VRDYKLTGGEPLLRSD--------------IVDIVRKMNRDGVEISMTTNGFRLAELAED 130
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGIN 248
+ V +++H P +FS+ A + + AG+ + +VLLKGIN
Sbjct: 131 LAAAGLRRVNVSVHTTDPEKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGIN 190
Query: 249 DDPEILANLMR 259
DD E L +L++
Sbjct: 191 DDRESLRSLVK 201
>gi|323141165|ref|ZP_08076066.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT
12067]
gi|322414308|gb|EFY05126.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT
12067]
Length = 351
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEK-----SQIWEVIFTG-GDPLI 156
C ++C FC KG V L++ + A + E+ + + V+ G G+P++
Sbjct: 113 CDMHCAFC-----ASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPML 167
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HA- 213
VL+ L ++ R + I P I+ L+E G P+ +AI HA
Sbjct: 168 ----NFDSVLQALDFLHREDTCNMSYRNMTISTCGIIPG-IKRLEEQGNPINLAISLHAV 222
Query: 214 -----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP---EILANLMR 259
N Y F + AA S +G + + +LLKG ND P E+L+N +R
Sbjct: 223 KNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLR 282
>gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris CGA009]
gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris
CGA009]
Length = 344
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P+ R D + + + C C +C +M + +L+ ++ + + K +
Sbjct: 15 PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
++ TGG+PL+ + + ++++L R++K + R EL C
Sbjct: 74 RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128
Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ V +++ P EF E +A I AG+ + SV+LKG N+D +
Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNEDE--IP 186
Query: 256 NLMR 259
+LMR
Sbjct: 187 SLMR 190
>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 614
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
I + + HN +P+ R P +++L + P D + P +G+ L ++
Sbjct: 127 IVDAADRHNALEPLYRNSGP----IDLL--HQVSPWLDGSLVPGEGV--------LWEVS 172
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
CP C FCF + S + E AL SQ+W + T P
Sbjct: 173 RGCPFRCSFCFDARGDHGVRTMAFSRLEQELALFVKHRVSQVWVLDSTFNYP-------A 225
Query: 163 QKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ K LR IK V L FH I + I+ EL Q L E V I + + +P
Sbjct: 226 ERGKKLLRLIKRVAPHLHFHLEAKI---EFIDEELAQLLSEIHCSVQIGLQSANP 277
>gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
Length = 454
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-- 144
KGIV + L + H C + CR+CF + K V++ + + A+ +I S
Sbjct: 87 KGIVKA----MCLHVSHDCNLACRYCFASGGNFNMKKEVMNIETAKKAIDFIISNSGNKV 142
Query: 145 -WEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQ 198
EV F GG+PL+ V KT+ Y KH +I RF V +N E+I
Sbjct: 143 HLEVDFFGGEPLL----NFDVVKKTVEYAKEEAKKHNKIFRFTLTTNCV---LLNDEIID 195
Query: 199 CLKEAGKPVYIAIHA 213
L + V +++
Sbjct: 196 YLNKEMYNVVLSLDG 210
>gi|307149776|ref|YP_003890819.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986576|gb|ADN18454.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 5944
Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPD---LAAGTSHFRLTIEEGQKIVASLKEKISG 303
+NDD NL+ + V L + + ++ D L GT F L+IE G+ ++ +
Sbjct: 1538 LNDD-----NLINSIVSLELDLFIINSWDGNHLGYGTDFFNLSIENGETLLNTTFSNTEE 1592
Query: 304 LCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
L Q + D P G G ++IDT N + G+ Y ++V+ +P
Sbjct: 1593 LSQSYPDAWGTGDYPSGTGAIEIDTLNSSEDGSAVY------HLVYTFP 1635
>gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110]
gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110]
Length = 351
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162
C V CRFC R+ + Q G S + A +A + + + +V+F G G+P +H L
Sbjct: 106 CAVGCRFCMTGRDGLLRQVG----SAEIIAQVALARMRRPVRKVVFMGMGEP---AHN-L 157
Query: 163 QKVLKTLRYIKHVQILRFHSRV--PIVDPQ--------RINPELIQCLKEAGKPVYIAIH 212
V++ + + V + + V + DP+ R+ P L L + +
Sbjct: 158 DNVMEAIELLGTVGNIGHKNLVFSTVGDPRAFERLQQARVRPALALSLHTTKAGLRKKLL 217
Query: 213 ANHPYEFSEEAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMR----TFVELRIK 267
P EE + A R A A G + Q LL G+ND PE + ++R F L +
Sbjct: 218 PRAPNMTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFGVLNMI 277
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
P+ + G + R ++E +++ +L ++
Sbjct: 278 PF-----NAVEGVAFSRPSLERCEQMARTLHQR 305
>gi|300714617|ref|YP_003739420.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
Eb661]
gi|299060453|emb|CAX57560.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
Eb661]
Length = 455
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
N + + RYPDR L +H+ C C FC ++V Q+ + D A + IQ
Sbjct: 36 NEAAFQQAAQRYPDRPLSLYVHIPFCHRLCYFCGCNKLVTRQQHKADAYLDALA--SEIQ 93
Query: 140 EKSQIW------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQ 190
+++++ ++ + GG P L+ +++ +++ LR Q F + VDP+
Sbjct: 94 SRAKLFRGRTVSQMHWGGGTPTYLNKQQITRLITLLR-----QAFTFSEDAELSIEVDPR 148
Query: 191 RINPELIQCLKEAG 204
I +++ L AG
Sbjct: 149 EIELDVLDHLHAAG 162
>gi|332799081|ref|YP_004460580.1| Radical SAM domain-containing protein [Tepidanaerobacter sp. Re1]
gi|332696816|gb|AEE91273.1| Radical SAM domain protein [Tepidanaerobacter sp. Re1]
Length = 454
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149
Y + L + H C + C++CF + K ++S + + A+ ++ EKS + E+ F
Sbjct: 95 YVKALCLNVAHDCNLRCKYCFASKGDYHGKRELMSIEVGKKAVDFLVEKSGDMKNLEIDF 154
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GG+PL ++ +++V+ + I+ + +FH + + +N E++Q L E
Sbjct: 155 FGGEPL-MAMNTIKEVISYAKSIEKLCHKKFHFTIT-TNALLLNDEVMQYLHE 205
>gi|320160979|ref|YP_004174203.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
thermophila UNI-1]
gi|319994832|dbj|BAJ63603.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
thermophila UNI-1]
Length = 405
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGGDPLILSHK 160
C C +C G +K ++ +A + E + + + F GG P LS
Sbjct: 25 CVHRCAYCDFNTYAGMEKWIPAYTEALCREIAVVSEAAPEGISVQTIFFGGGTPSYLSAS 84
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L KVL T+R H Q++ +P + P L + L+EAG
Sbjct: 85 LLNKVLHTVR--SHFQVMEKAEISLEANPGTVEPHLFEELREAG 126
>gi|238797624|ref|ZP_04641120.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
mollaretii ATCC 43969]
gi|238718488|gb|EEQ10308.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
mollaretii ATCC 43969]
Length = 459
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
D N S + V RYP R L +H+ C C FC ++V Q+ VL ++
Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLENEIR 96
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+
Sbjct: 97 QRAALFA--GRQVSQMHWGGGTPTYLNKTQISHLMNLLR--EHFDFLPGAEQSIEVDPRE 152
Query: 192 INPELIQCLKEAG 204
I +++ L+ G
Sbjct: 153 IELDVLDHLRAEG 165
>gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528]
gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528]
Length = 1080
Score = 39.3 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGKPVYIAIHANHPYE 218
K +V++ L + ILR + IV+ P +I L+ L + K VY +A+H +
Sbjct: 806 KESPEVIEELNRLIAPFILRRKKKDVIVELPDKIEKTLMVTLDDKQKKVY-KTYADHAVD 864
Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-------LMRTFVELRIKPYYL 271
E+ + N+ I +LS L+ + DP IL N M VEL
Sbjct: 865 LIEKKVKE-DEFKNSKIEILSYITKLRQLCLDPSILINNYSGGNGKMDALVELL------ 917
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
H +A G H L + ++ ++ EKISG PF LD G K++ + +KK
Sbjct: 918 -HKSIAQG--HRILVFSQFTSVLKNIGEKISGEKIPFSYLD---GTIKLEERINIVKKFN 971
Query: 332 NG 333
G
Sbjct: 972 KG 973
>gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 367
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI------------L 98
NPNDP+ + E I P+E + + ++ + ++I +
Sbjct: 9 NPNDPVDSVLLKATEGKRISPKEGLLLYKEGDFLKIQMVARFLREKIRPHSEASYTMFRV 68
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C V C FC + +G+ KG VLS +D + Y E+ ++ GG L
Sbjct: 69 VNYTNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDYAMEEGAD-QMFLQGGVYPELP 127
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG 204
V++T++ +R S V +++ + I E+++ LKEAG
Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLREVLEILKEAG 177
>gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
[Thermococcus gammatolerans EJ3]
gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
[Thermococcus gammatolerans EJ3]
Length = 419
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
G++ R + I ++ + C + C FC E S+ + D + + + E ++I
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167
Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
E G G+PLI + ++ VQ LR H V ++ Q + +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216
Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
L EAG V ++IH+ P Y+ + + L NAGI +L V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-DHVLEMAEALVNAGIDVLIAPVIIFG 275
Query: 247 INDD 250
INDD
Sbjct: 276 INDD 279
>gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
Length = 442
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 68/231 (29%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C C FCF ++ + T L KD ++ L+++Q G+ + L++ Q
Sbjct: 94 CRNKCMFCFIDQLPKGMRET-LYFKDDDSRLSFLQ------------GNFVTLTNMSEQD 140
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY------- 217
+ +RY RI+P + I++H +P
Sbjct: 141 IEDIIRY-------------------RISP------------INISVHTTNPELRQRMIT 169
Query: 218 -EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIKP-- 268
F+ + + RLA AGI + Q VL G+ND E+ L+NL + I P
Sbjct: 170 NRFAGRLYSIMERLAEAGITMNCQIVLCPGVNDGKELERTITDLSNLYPNVNSVAIVPVG 229
Query: 269 ---YYLHHPDLA---AGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYIL 311
Y H P L T++ L + EG +K + + + + FYI+
Sbjct: 230 VTRYRDHLPHLEIFNEKTANEALDLVEGLQEKCLEKFGSRFAFMSDEFYII 280
>gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
29176]
gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
29176]
Length = 456
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-----GIVHRYPDRILLKLLHVCPVY 108
D QF + EEL +L E+ P G+ ++ G+ + + L+ H C
Sbjct: 38 DIFDYQFYVEAEELVVLVEK---PDGEQWEMEIEKEADEGLGIEFEEG-LMDEYHSCHNK 93
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
C FCF +M + T L KD ++ L+++Q G+ + L++ + V +
Sbjct: 94 CIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITLTNMSDKDVERI 140
Query: 169 LRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
+RY R PI + Q NPEL +C +H F+ EA+ +
Sbjct: 141 VRY-------RLE---PINISFQTTNPEL-RCK---------MLHNR----FAGEALKKV 176
Query: 228 SRLANAGIILLSQSVLLKGINDDPEI 253
L GI + Q VL KG+ND E+
Sbjct: 177 DILYQGGIEMNGQIVLCKGVNDGEEL 202
>gi|21960794|gb|AAM87352.1|AE013983_5 O2-independent coproporphyrinogen III oxidase [Yersinia pestis KIM
10]
gi|45434742|gb|AAS60303.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Microtus str. 91001]
Length = 459
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132
D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+
Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 96
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+ I
Sbjct: 97 QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 153
Query: 193 NPELIQCLKEAG 204
+++ L+ G
Sbjct: 154 ELDVLDHLRAEG 165
>gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
Length = 336
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 84 SPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQ 139
SPLK + RY D + L + C + C +C R E V + +G LS + + LA +
Sbjct: 10 SPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSMLAVLA 69
Query: 140 EKSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQI 177
+ + +V +TGG+PL+ RL + K L I+ V +
Sbjct: 70 -RMGVSKVRYTGGEPLLRQDIVRLVRDAKALEGIETVSL 107
>gi|51594379|ref|YP_068570.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
32953]
gi|108809512|ref|YP_653428.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
gi|108810414|ref|YP_646181.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
gi|145601123|ref|YP_001165199.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
gi|150260915|ref|ZP_01917643.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
CA88-4125]
gi|153950356|ref|YP_001399025.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
31758]
gi|161484735|ref|NP_671101.2| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
gi|161511483|ref|NP_991426.2| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
str. 91001]
gi|162421654|ref|YP_001604667.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
gi|165926183|ref|ZP_02222015.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165940226|ref|ZP_02228756.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011477|ref|ZP_02232375.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166213708|ref|ZP_02239743.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167402108|ref|ZP_02307585.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167418791|ref|ZP_02310544.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167427043|ref|ZP_02318796.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167470513|ref|ZP_02335217.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
FV-1]
gi|170026399|ref|YP_001722904.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
gi|186893366|ref|YP_001870478.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
gi|218927242|ref|YP_002345117.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
gi|229836130|ref|ZP_04456298.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis Pestoides A]
gi|229841951|ref|ZP_04462106.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900596|ref|ZP_04515720.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis Nepal516]
gi|294502130|ref|YP_003566192.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
gi|51587661|emb|CAH19261.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
pseudotuberculosis IP 32953]
gi|108774062|gb|ABG16581.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
Nepal516]
gi|108781425|gb|ABG15483.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
gi|115345853|emb|CAL18711.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
CO92]
gi|145212819|gb|ABP42226.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
Pestoides F]
gi|149290323|gb|EDM40400.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
CA88-4125]
gi|152961851|gb|ABS49312.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
pseudotuberculosis IP 31758]
gi|162354469|gb|ABX88417.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
Angola]
gi|165911858|gb|EDR30505.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922043|gb|EDR39220.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989623|gb|EDR41924.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166205110|gb|EDR49590.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962785|gb|EDR58806.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167048483|gb|EDR59891.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167053970|gb|EDR63801.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169752933|gb|ACA70451.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
pseudotuberculosis YPIII]
gi|186696392|gb|ACC87021.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
pseudotuberculosis PB1/+]
gi|229681935|gb|EEO78027.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis Nepal516]
gi|229690261|gb|EEO82315.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis biovar Orientalis
str. India 195]
gi|229706578|gb|EEO92584.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis Pestoides A]
gi|262360208|gb|ACY56929.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
gi|262364155|gb|ACY60712.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
gi|294352589|gb|ADE62930.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
Length = 457
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132
D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+
Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+ I
Sbjct: 95 QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 151
Query: 193 NPELIQCLKEAG 204
+++ L+ G
Sbjct: 152 ELDVLDHLRAEG 163
>gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus
kodakarensis KOD1]
gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
kodakarensis KOD1]
Length = 419
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
G++ R + I ++ + C + C FC E S+ + D + + + E ++I
Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167
Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
E G G+PLI + ++ VQ LR H V ++ Q +N +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLNDKLVE 216
Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
L EAG V ++IH+ P Y+ + + L NAGI +L V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPDKAKMLMGRKDYDL-QHVLDMAEALVNAGIDVLIAPVIIFG 275
Query: 247 INDD 250
+ND+
Sbjct: 276 VNDN 279
>gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 453
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149
Y I L ++H C + C++CF E G V+S + + A+ Y+ ++S + E+
Sbjct: 93 YIKAICLNVIHGCNLRCKYCFADEGEYHGHGGVMSVETAKKAIDYVIKRSGPRKNIEIDL 152
Query: 150 TGGDPLILSHKRLQKVLKTLR 170
GG+P ++ K +++++K R
Sbjct: 153 FGGEPTLIMDK-IKEIIKYAR 172
>gi|311281670|ref|YP_003943901.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
cloacae SCF1]
gi|308750865|gb|ADO50617.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
cloacae SCF1]
Length = 457
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
D + + V RYP+R L +H+ C C FC ++V Q+ D
Sbjct: 35 DFGDAAFQLAVSRYPERSLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDVLEQEIL 94
Query: 132 -EAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VD 188
A L + SQ+ W GG P L+ ++ ++++ LR H R + + I VD
Sbjct: 95 HRAPLFNGRHVSQLHW----GGGTPTYLNKAQISRLMRLLRENFH---FRDDAEISIEVD 147
Query: 189 PQRINPELIQCLKEAG 204
P+ I +++ CL++ G
Sbjct: 148 PREIELDVLDCLRQEG 163
>gi|114567979|ref|YP_755133.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338914|gb|ABI69762.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 458
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGD 153
+ L + H C + C +CF + + ++S + +AAL ++ E+S Q EV F GG+
Sbjct: 104 LCLNMAHSCNMKCSYCFASQGNFGLRPALMSLETAKAALDFLLEQSGERQNLEVDFFGGE 163
Query: 154 PLIL 157
PL++
Sbjct: 164 PLLV 167
>gi|229591974|ref|YP_002874093.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
gi|229363840|emb|CAY51294.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
fluorescens SBW25]
Length = 460
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 32/218 (14%)
Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
+L P + P A QF Q ++L RE PL VH +
Sbjct: 16 DLAGPRYTSYPTAVQFGSQVGTFDLLHALRE---SRKAARPLSLYVH----------VPF 62
Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C +C +++ +G L ++ + ++ K + ++ F GG P LSH
Sbjct: 63 CANICYYCACNKVITKDRGRALPYLQRLEQEIQLVACHLDPKQPVEQLHFGGGTPTFLSH 122
Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
L++V+ LR +H +L S +DP+ + + L+E G V I + P
Sbjct: 123 DELRQVMNCLR--QHFNLLDDDSGDYGIEIDPREADWATMGLLRELGFNRVSIGLQDLDP 180
Query: 217 YEFSEEAIAAISRLAN----AGIILLSQSVLLKGINDD 250
E A++RL + +I ++++ + IN D
Sbjct: 181 -----EVQRAVNRLQSLEETRAVIDAARTLQFRSINVD 213
>gi|312792558|ref|YP_004025481.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312877157|ref|ZP_07737127.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor lactoaceticus 6A]
gi|311796057|gb|EFR12416.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor lactoaceticus 6A]
gi|312179698|gb|ADQ39868.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 231
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ ++V + KG+ + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P E FS ++ ++ L N+ I ++ + K ++ +IL N+ R
Sbjct: 119 MDVKAPLEKYPQITGFSDIDKIKKSVEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177
Query: 262 VELR---IKPY 269
+ R IKPY
Sbjct: 178 KDSRLYVIKPY 188
>gi|312128493|ref|YP_003993367.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor hydrothermalis 108]
gi|311778512|gb|ADQ07998.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor hydrothermalis 108]
Length = 231
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ ++V + KG+ + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSDLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P E FS ++ +I L N+ I ++ + K ++ +IL N+ R
Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177
Query: 262 VELR---IKPY 269
+ R IKPY
Sbjct: 178 KDSRLYVIKPY 188
>gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis CV56]
Length = 275
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
P++ H +L I VQ+L H P + ++ + + LK AG
Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109
>gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis KF147]
gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis
subsp. lactis KF147]
Length = 275
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
P++ H +L I VQ+L H P + ++ + + LK AG
Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109
>gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2]
gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
Length = 379
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLILSHK 160
++C VYCRFC GS +G VLS+ E L IQE + E++ GG L
Sbjct: 63 NICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGGTNPNLPFS 119
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG 204
+L+ ++ +H + HS P + Q++ E+I+ L EAG
Sbjct: 120 YYTDLLREIK--QHFPDITMHSFSP-AEIQKMKEVSEGLSLDEVIRQLNEAG 168
>gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
Length = 336
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R D I L + C C +C +M + VLS ++ A L I + + +V TG
Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEEC-ARLVKIFVQMGVSKVRITG 75
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
G+PL+ K Q + + + ++ ++ L + ++ Q L++AG K + I+
Sbjct: 76 GEPLV--RKNAQWLFEEIGHLPGLKELVVTTNGSQLEHQ------AAALRQAGVKRINIS 127
Query: 211 IHANHPYEFSE--------EAIAAISRLANAGIILLS-QSVLLKGINDDPEILANLMRTF 261
+ + + F + + + I +AG + SV+++G+NDD + +L+R
Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDDEAL--DLLRFA 185
Query: 262 VELRIKPYYLHHPDLAA 278
++ +I Y+ L A
Sbjct: 186 IDQQIDISYIEEMPLGA 202
>gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
Length = 464
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + KE+ + E+ +P+ + G++ + L + H C + C +CF +
Sbjct: 65 QILELKEQGRLFSEDTYEPMAGQLKAKTSGVIKA----LCLHIAHTCNLNCSYCFASQGK 120
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156
++S + + AL ++ E S EV F GG+PL+
Sbjct: 121 YHGDRALMSFETGKRALDFLVENSGTRRNLEVDFFGGEPLM 161
>gi|91772361|ref|YP_565053.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
6242]
gi|91711376|gb|ABE51303.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242]
Length = 206
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 78 IGDNNHSPLKGI---VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
IGD + + G+ + D + L + + C C FC R G + +K E +
Sbjct: 2 IGDKLNGDIAGVGTLCYEGHDNLYLNITNRCSANCVFCIRDISDGIYGSNLRLTK--EPS 59
Query: 135 LAYIQEK-----SQIW-EVIFTG-GDPLILSHKRLQKVLKTLRYIK-HVQILRFHSR--V 184
L I +K +I+ EV+FTG G+P I RL VL+ R++K H +R +
Sbjct: 60 LDEILDKLGSLDLEIYREVVFTGFGEPTI----RLDIVLEVTRWLKEHGMKVRIDTNGHA 115
Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSE----------EAIAAISRLA-N 232
++ P+R ++I LK+AG V ++++A + E EA+ ++ A N
Sbjct: 116 QLLHPER---DVISELKDAGLDEVSVSLNAESKERYDELCQPDLENAYEAMLEFTKEAVN 172
Query: 233 AGIILLSQSVLLKGIND 249
AGI + + G ND
Sbjct: 173 AGI---ESRMTVVGFND 186
>gi|325479346|gb|EGC82442.1| six-Cys-in-45 modification radical SAM protein [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 460
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLL 102
+IN ++ ND QF+ EE+N L E D+ + L + P I L +
Sbjct: 47 IINKYDINDD---QFLEAYEEVNELVNEGL-LFSDDIYEDLSIDITNKPTTIKALCLNVA 102
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156
H C + C +CF + S +++ + +A+ ++ E S ++ F GG+PL+
Sbjct: 103 HTCNLSCEYCFAKGGKYSGPDAIMTEEVARSAIDFLLENSGSHYNLDIDFFGGEPLL 159
>gi|315924152|ref|ZP_07920378.1| oxygen-independent coproporphyrinogen III oxidase 2
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622554|gb|EFV02509.1| oxygen-independent coproporphyrinogen III oxidase 2
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 512
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Query: 104 VCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+CP C +C + +KG + L S+ + I+ + ++ + GG P +
Sbjct: 196 ICPAKCSYCSFVSTIADKKGVLCADYLQGLISEIRQMGAWMIKRQLRVDTLYIGGGTPSV 255
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS ++++++L L+ + V P+ PE + LK G + +P
Sbjct: 256 LSVRQIERLLAALKESRLVHSKLREFTFEAGRPETTTPEKLAVLKAFG----VDRLCLNP 311
Query: 217 YEFSEEAIAAISRLANAGII 236
+ E +AA+ R A I
Sbjct: 312 QSMNNETLAAVGRFHTAADI 331
>gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 262
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I ++ +TGG+PLIL K + ++ I+ ++ + I + +L LKE
Sbjct: 2 EIKKIRYTGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKE 53
Query: 203 AG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
AG K V I++ +FS + + AI + + GI + +VL+KGINDD
Sbjct: 54 AGLKRVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE-- 111
Query: 254 LANLMRTFVEL 264
++ F++L
Sbjct: 112 ----IKNFIDL 118
>gi|313206128|ref|YP_004045305.1| radical sam domain protein [Riemerella anatipestifer DSM 15868]
gi|312445444|gb|ADQ81799.1| Radical SAM domain protein [Riemerella anatipestifer DSM 15868]
gi|315022935|gb|EFT35958.1| Queuosine Biosynthesis QueE Radical SAM [Riemerella anatipestifer
RA-YM]
Length = 209
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
L C V C +C +E ++ +++ A +A K+ ++ TGG+PL+ + +
Sbjct: 40 LGGCDVGCHWCDVKESWDPNLHPLMDAEEV-AQIAANHSKT----IVLTGGEPLMWNLEI 94
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
L K LK L H++ + +D ++P+ KE+ + + I NH +
Sbjct: 95 LTKKLKDLGCTIHIETSGAYEISGHIDWVCLSPKKTGLPKESIYAKANELKVIIFNNHDF 154
Query: 218 EFSEEAIAAISR 229
+F+EE + +S+
Sbjct: 155 KFAEEQASKVSQ 166
>gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM
265]
gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM
265]
Length = 351
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 30/260 (11%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
N PL HR + + C + C +C R E G S L +
Sbjct: 22 NTSPPLSDTFHRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLA 81
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
++ I ++ TGG+PL+ + ++ T + ++ + + ++D + ++ L +
Sbjct: 82 EAGITKIRLTGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLLLD-RHLDALLSAGI 138
Query: 201 KEAGKPV-------YIAIHANHPYEFSEEAIAAISRLAN-AGIILLSQSVLLKGINDDP- 251
+ ++AI + +E ++ A + RL + + L V+L+GINDD
Sbjct: 139 DAVNMSIDSLRADRFLAITRRNEFERTK---ANLDRLLSLESVPLKINVVMLRGINDDEI 195
Query: 252 EILANLMRT------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL---KEKIS 302
+ NL R F+EL +P+ H T F L +++ + ++ S E++
Sbjct: 196 KDFTNLTREHPISVRFMEL--QPFDDHQ---IWRTGKF-LGMDKIRGLLQSAHPGMEELQ 249
Query: 303 GLCQPFYILDLPGGYGKVKI 322
G ++ LPG G I
Sbjct: 250 GSGTEYFSFTLPGYRGSWAI 269
>gi|261403228|ref|YP_003247452.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
gi|261370221|gb|ACX72970.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
Length = 243
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 105 CPVYCRFCFRR--------EMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
CP+ C +C E S +K + S +D A+ ++ ++ V FTGG
Sbjct: 28 CPLNCLYCDEEHKKHVNLVEQYPSSGKFEKQNLESEEDIIKAVNKLK-TPDLFSVSFTGG 86
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR----FHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+PL L HK ++++ K L+ + + L F RV D I+ +L K G+ Y
Sbjct: 87 EPL-LYHKEIKEISKILKNLGYRTFLESNGIFPERVFHFDIASIDIKLKDHFKNIGEEEY 145
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG--INDDPEILANL 257
I+ N + I + N G + ++ V+ K IND EI +L
Sbjct: 146 KKIYKNE--------LKTIKKFYNMGTDVYAKIVITKDSKINDLVEISKDL 188
>gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
Length = 437
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K
Sbjct: 48 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 106
Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
D E L Y +K + V F GG+PL+L
Sbjct: 107 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 139
>gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2]
gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 454
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K
Sbjct: 65 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 123
Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
D E L Y +K + V F GG+PL+L
Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156
>gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus
fer1]
Length = 315
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++L +C +C FC M G+++ + + + + + ++ FTGG+PL L
Sbjct: 23 IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVAVAASHGVNKIKFTGGEPL-LR 78
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
L+ V +T ++I + + P+L + LKEAG V I++HA Y
Sbjct: 79 EDILEIVRRTRKHIT--------GNISLTTNGVELPKLAKGLKEAGLDRVNISMHAIDEY 130
Query: 218 EFS-------------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
F ++ I A +R A G I ++ VL+K IN+D
Sbjct: 131 NFHFITDTKKNFLPIVKQGIQA-ARDAGLGPIKIN-FVLMKNINED 174
>gi|320017067|gb|ADW00639.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
oxygen-independent [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 456
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKD-- 130
D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+
Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94
Query: 131 TEAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
AAL ++ SQ+ W GG P L+ ++ ++ LR +H L + VDP
Sbjct: 95 QRAALFTGRQVSQMHW-----GGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDP 147
Query: 190 QRINPELIQCLKEAG 204
+ I +++ L+ G
Sbjct: 148 REIELDVLDHLRAEG 162
>gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
Length = 458
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 53/217 (24%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI-------LL 99
IN D Q++ Q E L++L + + L I Y + + L+
Sbjct: 38 INDQELEDVFDFQYLVQDEHLDVLIRKA------DGEEWLLDIDKDYDEDLGIEFENGLM 91
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C FCF +M + T L KD ++ L+++Q G+ + L++
Sbjct: 92 DDYRSCSNKCIFCFIDQMPKGMRKT-LYFKDDDSRLSFLQ------------GNYVTLTN 138
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + + L+Y H+ PI + Q NPEL +C K G
Sbjct: 139 MSDKDIDRILKY--HLS--------PINISFQTTNPEL-RC-KMLGN------------R 174
Query: 219 FSEEAIAAISRLA--NAGIILLSQSVLLKGINDDPEI 253
F+ EA+ + RL GI + Q VL KG+ND E+
Sbjct: 175 FAGEALKKVDRLCAPGTGIEINGQIVLCKGVNDGDEL 211
>gi|78358007|ref|YP_389456.1| ribosomal RNA large subunit methyltransferase N [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|123727640|sp|Q30X35|RLMN_DESDG RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|78220412|gb|ABB39761.1| 23S rRNA m(2)A-2503 methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 358
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 30/177 (16%)
Query: 105 CPVYCRFC------FRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
C + C FC F R M S+ G VL +++ L + E+ + ++F G G+PL+
Sbjct: 112 CAMGCTFCATGTLGFERNMTMSEILGQVLVAREY---LNDVAERPILRNLVFMGMGEPLL 168
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L +++++L + L+F R V +NPE ++ L E+G Y+A+ + P
Sbjct: 169 ----NLDEIMRSLHTLNSELGLQFSPRRITVSTCGVNPEGLRRLGESG-LAYLAVSLHAP 223
Query: 217 Y-EFSEEAIAAISRLANAGIILLSQS-------------VLLKGINDDPEILANLMR 259
E + +R I QS +LL G+ND E L+R
Sbjct: 224 TQELRRTIMPKAARWELNDFIEALQSYPLKTRERITFEYLLLGGVNDSLEHAKQLVR 280
>gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 318
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIF 149
R D + + L C + C +C + G K E L I+ I ++ +
Sbjct: 7 RNIDYLRISLTDRCNLRCIYCMPEQ--GVSKKCHEDVIRFEEVLKIIKSAVPLGIKKIRY 64
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
TGG+PLIL K + ++ I+ ++ + I + +L LKEAG K V
Sbjct: 65 TGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKEAGLKRVN 116
Query: 209 IAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I++ +FS + + AI + + GI + +VL+KGINDD ++
Sbjct: 117 ISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE------IKN 170
Query: 261 FVEL 264
F++L
Sbjct: 171 FIDL 174
>gi|217969710|ref|YP_002354944.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
gi|217507037|gb|ACK54048.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
MZ1T]
Length = 473
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C +C +++ G +K+ E A ++ Q+ ++ GG P LSH
Sbjct: 77 CNTICYYCACNKIITKDHGRSAKYLKYLAKEIEMQAACLEGSRQVTQLHLGGGTPTFLSH 136
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218
+++++ +R +H ++ VDP++++ + ++ L E G + + + +
Sbjct: 137 DEMRELMAAVR--EHFTLVPNGEYSIEVDPRKVDFDTVKLLAELGFNRMSVGVQ-----D 189
Query: 219 FSEEAIAAISRL 230
F+E+ A++R+
Sbjct: 190 FAEDVQQAVNRI 201
>gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris TIE-1]
gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris TIE-1]
Length = 344
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
P+ R D + + + C C +C +M + +L+ ++ + + K +
Sbjct: 15 PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
++ TGG+PL+ + + ++++L R++K + R EL C
Sbjct: 74 RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128
Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ V +++ P EF + +A I+ AG+ + SV+LKG N+D +
Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNEDE--IP 186
Query: 256 NLMR 259
+LMR
Sbjct: 187 SLMR 190
>gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
Length = 458
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151
D + L + H C + C++CF + + +V+S A+AY+ E S+ + + F G
Sbjct: 82 DMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPDSERYTIYFFG 139
Query: 152 GDPLILSHKRL 162
G+PL+ HK+
Sbjct: 140 GEPLL--HKQF 148
>gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
C + C+FC+ M ++ T + + A + E I V+F G G+P
Sbjct: 190 CAMNCQFCYTGRMGLTRHLTAAEIVEQAVYARRLFSSEVGSITNVVFMGMGEPF----HN 245
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
++ V+K + H Q L F R V + P+L L+E+ +A+ N +
Sbjct: 246 IESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESN--CALAVSLNATTDEVR 303
Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252
+ I+R N ++L L + V+L G+ND E
Sbjct: 304 NWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVNDSLE 349
>gi|78776805|ref|YP_393120.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
1251]
gi|78497345|gb|ABB43885.1| Oxygen-independent coproporphyrinogen III oxidase HemN
[Sulfurimonas denitrificans DSM 1251]
Length = 455
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C C FC + S++ +L ++ + +++ + ++ F GG P
Sbjct: 54 LPFCKNACYFCGCNVVFTSKEDKMLRYLEYLKRELKILSSFVDCNRSVIQMHFGGGTPTF 113
Query: 157 LSHKRLQKVLKTLR-----YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------- 204
S ++L +V+K +R ++K +I +DP+ I+ + ++ L + G
Sbjct: 114 FSAEQLDEVIKEIRHFFPNFVKEAEI------SCEIDPRHIDEDQMRVLSQNGFNRVSFG 167
Query: 205 -----KPVYIAIHANHPYEFSEEAI 224
+ V IA+H PYE ++ A+
Sbjct: 168 IQDFNEKVQIAVHRVQPYEITKYAM 192
>gi|115438803|ref|NP_001043681.1| Os01g0640800 [Oryza sativa Japonica Group]
gi|113533212|dbj|BAF05595.1| Os01g0640800 [Oryza sativa Japonica Group]
gi|218188735|gb|EEC71162.1| hypothetical protein OsI_03021 [Oryza sativa Indica Group]
gi|222618932|gb|EEE55064.1| hypothetical protein OsJ_02780 [Oryza sativa Japonica Group]
Length = 405
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIFTG-GDPLILSHK 160
C + C+FCF M G +K + +A A + E I V+F G G+PL
Sbjct: 157 CAMNCQFCFTGRM-GLRKHLSTAEIVEQAVFARRLFSDEFGSITNVVFMGMGEPL----H 211
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ VLK + Q L+F R V + P++ + L+E+ +A+ N +
Sbjct: 212 NIDNVLKASAIMVDEQGLQFSPRKVTVSTSGLVPQIKRFLQESN--CALAVSLNATTDEV 269
Query: 221 EEAIAAISRLANAGIIL---------------LSQSVLLKGIN---DDPEILANLMR 259
I I+R N ++L + V+L G+N DD + L +L+R
Sbjct: 270 RNWIMPINRKYNLSLLLGTLREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVR 326
>gi|238794560|ref|ZP_04638168.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
intermedia ATCC 29909]
gi|238726140|gb|EEQ17686.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
intermedia ATCC 29909]
Length = 459
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
D N S + V RYP R L +H+ C C FC ++V Q+ VL +
Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIC 96
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ A + Q+ ++ + GG P L+ K++ ++ LR + L + VDP+
Sbjct: 97 QRATFFA--GRQVSQMHWGGGTPTYLNKKQITHLMNLLR--DNFDFLPGAEQSIEVDPRE 152
Query: 192 INPELIQCLKEAG 204
I +++ L+ G
Sbjct: 153 IELDVLDHLRAEG 165
>gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 453
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 65 EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+E+ L EE ED + HS + Y I L ++H C + C++CF E
Sbjct: 63 DEIQELAEEGILYSEDQYEEIAHSSMDD--RDYIKAICLNVIHGCNLRCKYCFADEGEYH 120
Query: 121 QKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLR 170
G V+S+ + A+ Y+ ++S + E+ GG+P ++ +++++K R
Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEPTLIMDT-IKEIIKYAR 172
>gi|291560706|emb|CBL39506.1| Arylsulfatase regulator (Fe-S oxidoreductase) [butyrate-producing
bacterium SSC/2]
Length = 458
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
+ L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G
Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151
Query: 152 GDPLI 156
G+PL+
Sbjct: 152 GEPLM 156
>gi|317499049|ref|ZP_07957330.1| radical SAM superfamily protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316893699|gb|EFV15900.1| radical SAM superfamily protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 458
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
+ L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G
Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151
Query: 152 GDPLI 156
G+PL+
Sbjct: 152 GEPLM 156
>gi|329766234|ref|ZP_08257792.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137293|gb|EGG41571.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 237
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150
Y + L L CP C +C +E + G S E A I K+Q ++V FT
Sbjct: 19 YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGQEYS---IEEACTLIDSNLKNQTYKVNFT 75
Query: 151 GGDPLI 156
GGDPLI
Sbjct: 76 GGDPLI 81
>gi|167766768|ref|ZP_02438821.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
gi|167711522|gb|EDS22101.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
Length = 458
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
+ L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G
Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151
Query: 152 GDPLI 156
G+PL+
Sbjct: 152 GEPLM 156
>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
Length = 460
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C +C +++ +G L ++ E YI + I ++ F GG P LSH
Sbjct: 63 CAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTFLSH 122
Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG 204
L+++++ LR +H +L S +DP+ + + L+E G
Sbjct: 123 DELRRLMQHLR--QHFNLLDDDSGDYSIEIDPREADWSTMGLLRELG 167
>gi|212711633|ref|ZP_03319761.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
30120]
gi|212685735|gb|EEB45263.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
30120]
Length = 457
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 31/224 (13%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-----LSSKDTE 132
D N RYPDR L +H+ C C FC ++V QK + K+
Sbjct: 35 DYNEQAFIEATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLEVIEKEII 94
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQR 191
A ++ ++ + ++ + GG P L ++ ++ L+ H + + I VDP+
Sbjct: 95 QRAALLKNRT-VTQMHWGGGTPTYLDKAQVSHLVGLLKKYFHFAP---DAEMSIEVDPRE 150
Query: 192 INPELIQCLKEAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
I ++I L+ G K V + ++ EF A I R G S
Sbjct: 151 IELDMIDHLRSEGFNRLSMGVQDFNKEVQVLVNREQDEEF---IFALIKRAKETGFTSTS 207
Query: 240 QSVLLKGINDDPEILANLMRTFVEL---RIKPY-YLHHPDLAAG 279
++ PE A ++ EL R+ + Y H P+L A
Sbjct: 208 IDLIYGLPKQTPESFAFTLKKVAELAPDRLSVFNYAHLPNLFAA 251
>gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
Length = 324
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G V I++ P EF E I + +L N
Sbjct: 114 GLDGVNISLDTLDPEEFRE--ITRVGQLRN 141
>gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8]
gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8]
Length = 454
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K
Sbjct: 65 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VLHISSGSYISEKVQ 123
Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
D E L Y +K + V F GG+PL+L
Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156
>gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11]
gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11]
Length = 324
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKED 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA
Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|146296194|ref|YP_001179965.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409770|gb|ABP66774.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 231
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ ++V + KG + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGNFM---DDSIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQRDLL------VKLDTNGSRPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE-------FSE--EAIAAISRLANAGIILLSQSVLLKGINDDPEIL--ANLMR 259
+ P E FSE + +I L N+ I ++ + K ++ +IL A L++
Sbjct: 119 MDVKAPLEKYPQITGFSEVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDILNIARLLK 178
Query: 260 TFVELRIKPY 269
IKPY
Sbjct: 179 DAKLYVIKPY 188
>gi|189346577|ref|YP_001943106.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Chlorobium limicola DSM 245]
gi|189340724|gb|ACD90127.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Chlorobium limicola DSM 245]
Length = 244
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 20/202 (9%)
Query: 93 YPDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIF 149
YP I + V C C +C E+V ++ TV++ + E + +S + V+
Sbjct: 28 YPGCIAAVIFTVGCNFRCSYCHNPELVEPER-TVVNRRIPFHEVVRLVGRNRSCLDGVVV 86
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAGK 205
TGG+P + H L + L+T R + L + P + + L+ C +K +
Sbjct: 87 TGGEPAM--HASLPESLRTFRKLGLRVKLDTNGSYPEMLDLLLQERLVDCVALDIKAPLR 144
Query: 206 PVYIAIHANHPYEFSEEAIAAISR----LANAGIILLSQSVLLKGI---NDDPEILANLM 258
P P SE + I R L N+GI L+ +S LLKGI D E+ A
Sbjct: 145 PSRYEEVVGIPC--SEAMMKRIERSCSLLLNSGIDLVFRSTLLKGIHASEDVEEMAAAAG 202
Query: 259 RTFVELRIKPYYLHHPDLAAGT 280
V R +P P LAAG
Sbjct: 203 NRLVLQRFRPERTLRP-LAAGA 223
>gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
Length = 334
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
PLK R D I + + C + C +C E + Q + S + AA+ + +
Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPMGV 63
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V TGG+PL+ K L+ ++ + I+ VQ + + ++ P + LKEAG
Sbjct: 64 SKVRLTGGEPLV--RKDLETLVHKIASIEGVQDISLTTNGIML------PSKARLLKEAG 115
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
+ I++ + EE A I+R +L VL+KG N+
Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170
Query: 250 DPEILANLMRTFVELRI 266
D +R F+ L +
Sbjct: 171 DE------IRDFIALTL 181
>gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
Length = 324
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|222528368|ref|YP_002572250.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor bescii DSM 6725]
gi|222455215|gb|ACM59477.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor bescii DSM 6725]
Length = 231
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ E+V + KG + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE 218
+ P E
Sbjct: 119 MDVKAPLE 126
>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
cholodnii SP-6]
Length = 487
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 47/237 (19%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C +C ++V G + +++ E + ++ ++ F GG P LS
Sbjct: 91 CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG------------KP 206
L +++ LR H++ H I +DP+ ++ E + LKE G
Sbjct: 151 AELDRLMGELRRHFHIEP---HGEYSIEIDPRTVSRERLAHLKELGFNRVSFGVQDFDAD 207
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELR 265
V A+H P+E E + L I + L+ G+ PE A +R LR
Sbjct: 208 VQKAVHRVQPFEQVEALMKDARELGFHSINV----DLIYGLPKQTPESFARTVRQVAGLR 263
Query: 266 IKPYYLHHPDLAA--GTSHF--------RLTIEE---GQKIVASLKEKISGLCQPFY 309
PD A G +H R+ EE G + L + ISG Y
Sbjct: 264 --------PDRIAMYGYAHLPQRFKPQRRIVTEELPRGSDRIGMLSQAISGFISHGY 312
>gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus
sp. 7L76]
gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
Length = 321
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K +R D + L L C + C +C + K L + D L I K I
Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEDIK 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+V TGG+PL+ + L IK ++ + +V + Q LKEAG
Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ I++ P EF E I + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138
>gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
AR01/DG]
gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ARO1/DG]
Length = 324
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
Length = 365
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143
PL R + L + C + C +C +MV K +LS ++ E ALA+I +
Sbjct: 32 PLVDAFGRTVTYLRLSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFI--RRG 89
Query: 144 IWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ ++ TGG+PL H+R L +++ L + LR R +D + + +
Sbjct: 90 VRKIRITGGEPL---HRRGLMGLIENL-----GRTLRPAERECGLDELTLTTNATRLAEV 141
Query: 203 AG-------KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGI 247
AG + + +++ P F + +A ++ AG+ + +V L+G+
Sbjct: 142 AGDLAARGVRRINVSLDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGV 201
Query: 248 NDD 250
N+D
Sbjct: 202 NED 204
>gi|228939284|ref|ZP_04101877.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228978776|ref|ZP_04139147.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228781037|gb|EEM29244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228820479|gb|EEM66511.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 337
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ----KGTVLSSKDTEAALAYI 138
H +K + R + + ++ C C +C E+ G K +L + D LA +
Sbjct: 2 HENMKDSLERPLQDLRISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARL 61
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ ++ TGG+PL L+K L TL I + L + + + +
Sbjct: 62 FISMGVNKIRLTGGEPL------LRKDLPTL--IARLAKLEGLKDIGLTTNGIHLAKQAK 113
Query: 199 CLKEAG-KPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIN 248
LKEAG K V I++ A Y F ++ + I NAG+ + V+ KG+N
Sbjct: 114 ALKEAGLKRVNISLDAIEDYVFKKINGRNVSTKPVLKGIEEAKNAGLEVKVNMVVKKGMN 173
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAA 278
D + ++ R F E I+ ++ D+ +
Sbjct: 174 DSQ--ILHMARYFKEKEIQLRFIEFMDVGS 201
>gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8]
Length = 324
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|294661183|ref|YP_003573058.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336333|gb|ACP20930.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus
5a2]
Length = 339
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 25/168 (14%)
Query: 105 CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
C + C+FC R G +L +KD +I ++ G G+PL+
Sbjct: 95 CTLNCKFCHTGTQPLVRNLRAGEIVAQLLHAKDVLQDWPSHAPTRKINNIVMMGMGEPLL 154
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA--- 213
++V K ++ + H Q L + + I P++ +C +E G + I++HA
Sbjct: 155 ----NYEQVAKAIQIMMHPQGLDISRKKITLSTSGIVPQIKRCAEELGVNLAISLHAVTD 210
Query: 214 ---------NHPYEFSEEAIAAISRLANAGIILLS-QSVLLKGINDDP 251
N Y +E A + G ++ + V+LKG+ND P
Sbjct: 211 ELRNHLVPINKKYPINELLQACRDYASITGCRKITFEYVMLKGVNDSP 258
>gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
Length = 324
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K +R D + L L C + C +C + K L + D L I K I
Sbjct: 4 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 63
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+V TGG+PL+ + L IK ++ + +V + Q LKEAG
Sbjct: 64 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 115
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ I++ P EF E I + +L N
Sbjct: 116 DGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
Length = 324
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA
Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
Length = 324
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|238750771|ref|ZP_04612269.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
ATCC 43380]
gi|238710915|gb|EEQ03135.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
ATCC 43380]
Length = 459
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
D N S + V RYP R L +H+ C C FC ++V Q+ VL +
Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIR 96
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ A + Q+ ++ + GG P L+ ++ ++ LR ++ L + VDP+
Sbjct: 97 QRAALFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 152
Query: 192 INPELIQCLKEAG 204
I ++I L+ G
Sbjct: 153 IELDVIDHLRAEG 165
>gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
OG1RF]
Length = 321
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K +R D + L L C + C +C + K L + D L I K I
Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+V TGG+PL+ + L IK ++ + +V + Q LKEAG
Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ I++ P EF E I + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138
>gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
Length = 324
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA
Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|144899283|emb|CAM76147.1| FeMo cofactor biosynthesis protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 490
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 47/269 (17%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSS 128
+PE + I D H H Y R+ + + C + C +C R+ + + V S
Sbjct: 38 MPEHVWNKIKD--HPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVTSE 95
Query: 129 KDT--EAALAYIQEKSQIWEVIFTG----GDPL------ILSHKRLQKVLKTLRYI---- 172
+ T +AAL + +++ ++ G GD + + ++++K L L++
Sbjct: 96 RMTPEQAALKVVAVANKVPQLSVLGIAGPGDSMFDWRKTFETFRQVEKRLPDLKFCVSTN 155
Query: 173 -----KHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
H+ L H+ + +VDP+ I + + GK Y + A+ E
Sbjct: 156 GLALPDHIDALADHNIDHVTVTINMVDPE-IGTLIYPWIYHNGKR-YTGLDASKI--LHE 211
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-----PDL 276
+ ++ LA+ I++ SV++ G+ND +L+ ++ + +LH+ D
Sbjct: 212 RQMESLEALASKNILVKVNSVMIPGVNDQ-----HLLEVNAAIKARGAFLHNVMPLISDA 266
Query: 277 AAGTSHFRLTIEEGQKI--VASLKEKISG 303
A GT HF LT + G + L++K++G
Sbjct: 267 AHGT-HFGLTGQRGPSAAELKDLQDKLAG 294
>gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A
[Thermococcus onnurineus NA1]
gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A
[Thermococcus onnurineus NA1]
Length = 419
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 39/187 (20%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
G++ R + I ++ + C + C FC E S+ + D + + + + +QI
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLIKWFDDVAQIKGK 167
Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
E G G+PL+ + ++ VQ LR H V ++ Q +N L++
Sbjct: 168 GLEAHLDGQGEPLLYPFR-----------VELVQALREHPNVRVISMQSNGTLLNDRLVE 216
Query: 199 CLKEAG-KPVYIAIHANHPYEFSEEAIAAISR--------------LANAGIILLSQSVL 243
L EAG V +++H+ P E+A + R L NAG+ +L V+
Sbjct: 217 ELAEAGLDRVNLSLHSLDP----EKAKMLMGRKDYDLQHVLDMAEALVNAGVDVLIAPVI 272
Query: 244 LKGINDD 250
+ GIND+
Sbjct: 273 IFGINDN 279
>gi|68300836|gb|AAY89357.1| RNA polymerase IV largest subunit [Marchantia polymorpha]
Length = 1008
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
DR+ + LH C ++C R ++ Q + + TE A+AY + S+ WE +
Sbjct: 486 DRVSILRLHRCKSDGKYCEERRVLKLQDELQPVTMEILATETAIAYSSDSSEQWEGLDCA 545
Query: 152 GDPL-------ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPI 186
L + H +L K++ T + I IL R HS+V I
Sbjct: 546 ATELKQTEFFPWVGHVQLDKMVLTEKKISQEMILDRLHSKVKI 588
>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 341
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
CP C FC ++ + G ++ + + + K + E+ + GG+ + K QK
Sbjct: 15 CPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLSKNKGEDVELAYYGGNFTAIDIKMQQK 74
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+L+ R ++++ +R +R P I+ E++ LK+ K V + I +
Sbjct: 75 LLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTVELGIQS 119
>gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
Length = 324
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1]
gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1]
gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 324
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ + L IK ++ + +V + Q LKEA
Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
Length = 324
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ +K +R D + L L C + C +C + K L + D L I K
Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA
Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113
Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
G + I++ P EF E I + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141
>gi|302870990|ref|YP_003839626.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor obsidiansis OB47]
gi|302573849|gb|ADL41640.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Caldicellulosiruptor obsidiansis OB47]
Length = 231
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 16/128 (12%)
Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP +I C C FC+ ++V + KG + D Y+ ++ I + V T
Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGEFM---DDNIFFEYLDKRKGIVDAVCIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A
Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118
Query: 211 IHANHPYE 218
+ P E
Sbjct: 119 MDVKAPLE 126
>gi|217967818|ref|YP_002353324.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724]
gi|254807171|sp|B8E0X3|RLMN_DICTD RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|217336917|gb|ACK42710.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724]
Length = 348
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 30/206 (14%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E ED G+N + L I H+ + + + + CP+ C+FC ++G ++ L + +
Sbjct: 81 ELED--GENIETVL--ISHKNRNTVCVSVQVGCPIGCKFC-ATGLIGLKRN--LETHEII 133
Query: 133 AALAYIQE-----KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
L IQE + +I V++ G G+PL V+K++R IK S+
Sbjct: 134 GQLMVIQEDLEKKEEKISNVVYMGMGEPL----ANYDNVIKSIRIIKEEWGFNIGSKHIT 189
Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHA------------NHPYEFSEEAIAAISRLANA 233
+ I P++ Q +E K + I++HA N Y E +A
Sbjct: 190 LSTIGIIPKIYQLAEENLKIRLAISLHASNNELRSKIIPINKEYPIEELLESAFYYAEKT 249
Query: 234 GIILLSQSVLLKGINDDPEILANLMR 259
G + + VL+K ND E L+R
Sbjct: 250 GRRVTFEYVLIKNFNDRREDAKELVR 275
>gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
Length = 321
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K +R D + L L C + C +C + K L + D L I K I
Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+V TGG+PL+ + L IK ++ + +V + Q LKEAG
Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ I++ P EF E I + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138
>gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
62]
Length = 321
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+K +R D + L L C + C +C + K L + D L I K I
Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEAG
Sbjct: 61 KVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEAGL 112
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ I++ P EF E I + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138
>gi|302759444|ref|XP_002963145.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
gi|300170006|gb|EFJ36608.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
Length = 386
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
ERED G + L R + + + L C + C +C E V G L S+D
Sbjct: 49 EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108
Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156
ALA + + ++ TGG+P +
Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132
>gi|261403123|ref|YP_003247347.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
M7]
gi|261370116|gb|ACX72865.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
M7]
Length = 783
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIW 145
Y ++I +L+ VC + RE++ SQ TV LSS+ T++A + I +
Sbjct: 262 YDEQIKYELIKVCSEALKLMHARELLESQGKTVFLNYINKLSSQRTKSAKSVIND----- 316
Query: 146 EVIFTGGDPLILS---HKRLQKVLKTLRYI----KHVQILRFHSRVPIVDP--QRINPEL 196
E I + L+ S H +L+KV++ ++ I K +I+ F V+ +N
Sbjct: 317 EKIIKAVNLLLKSNTDHPKLEKVIEMVKKILKENKDERIIIFAQYRDTVEKIVNLLNQNE 376
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I+ +K G+ A +E I AI + G +L+S SV +GI+
Sbjct: 377 IKAIKFIGQ----ASKEKGKGMTQKEQIKAIEKFKKEGSVLVSTSVSEEGID 424
>gi|18312199|ref|NP_558866.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
aerophilum str. IM2]
gi|24211994|sp|Q8ZYE5|MOAA_PYRAE RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|18159637|gb|AAL63048.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
aerophilum str. IM2]
Length = 310
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 31/205 (15%)
Query: 96 RILLKLLHV----CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R L KL +V C C FC E ++G L+++D + + + + + TG
Sbjct: 8 RSLQKLRYVVNDECNYNCVFC-HFEGQSRRQGRYLTAEDY-GFVTSVFKSLGVADFKITG 65
Query: 152 GDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
G+PL+ L + KT Y V + + + ++ L+ AG K
Sbjct: 66 GEPLLRGDIDLIVANIAKTGAY------------VTLTTNGYLLRKWVRKLQAAGLKRAN 113
Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
++IH P ++S+ E + ++ + GI L +V+L+GIN D + + NL+
Sbjct: 114 VSIHTTDPEKYSKITGVPPSAFREVLRGLTEARDVGISLKLNAVVLRGINTDRDSVKNLV 173
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHF 283
+ L ++ G S F
Sbjct: 174 KLAASLGAALQFIELMPSGWGASVF 198
>gi|116751471|ref|YP_848158.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|205829911|sp|A0LQM1|RLMN_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|116700535|gb|ABK19723.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 342
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG-GDPLILSH 159
C + C+FC + G ++ LS+ + + +Q +S+I ++F G G+PL
Sbjct: 112 CALGCKFCLTGSL-GFKRN--LSAAEIVDQVCQVQRDLGSRSRITNIVFMGMGEPL---- 164
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
L VL+ +R I + F R + + P+L + +E+ + +++HA
Sbjct: 165 ANLDSVLRAIRVIAEPNGMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELR 224
Query: 220 SEEAIAAISRLANAGIILLS--------------QSVLLKGINDDPEILANLMRTFVELR 265
+E + ++R +++ + + +LL GINDDP+ L++ +R
Sbjct: 225 AE--LMPVNRTYPLEVLMAACREYPLPPRKRITFEYILLDGINDDPKQAKQLVKLLHGIR 282
Query: 266 IK 267
K
Sbjct: 283 AK 284
>gi|238790753|ref|ZP_04634513.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
frederiksenii ATCC 33641]
gi|238721151|gb|EEQ12831.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
frederiksenii ATCC 33641]
Length = 457
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
D N S + V RYP R L +H+ C C FC ++V Q+ VL +
Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ A+ + Q+ ++ + GG P L+ ++ ++ LR ++ L + VDP+
Sbjct: 95 QRAVLFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 150
Query: 192 INPELIQCLKEAG 204
I +++ L+ G
Sbjct: 151 IELDVLDHLRAEG 163
>gi|325294881|ref|YP_004281395.1| ribosomal RNA large subunit methyltransferase N [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065329|gb|ADY73336.1| Ribosomal RNA large subunit methyltransferase N [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 345
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157
CPV C+FC + ++ G + E YI E +I V+F G G+P +
Sbjct: 110 CPVGCKFC-----LTAKDGFTRNLTAAEIVDQYIHVQRDVGEDKRISNVVFMGMGEPFL- 163
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213
+ V K + + +L +R + + P + + KE K + I++HA
Sbjct: 164 ---NFENVKKAVEIMTDKNMLDLSTRKITISTVGVVPGIDRMAKEMNKVKLAISLHATTD 220
Query: 214 ---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMR 259
N Y S E +AA+ R I ++ + V+L+G+ND E L++
Sbjct: 221 EVREKIVPLNRKYPIS-EIMAALRRYPADNIRRIMIEYVMLEGVNDSVEDAKRLVK 275
>gi|302796832|ref|XP_002980177.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
gi|300151793|gb|EFJ18437.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
Length = 386
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
ERED G + L R + + + L C + C +C E V G L S+D
Sbjct: 49 EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108
Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156
ALA + + ++ TGG+P +
Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132
>gi|269303256|gb|ACZ33356.1| putative oxygen-independent coproporphyrinogen III oxidase
[Chlamydophila pneumoniae LPCoLN]
Length = 373
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAA 134
N SPL +H + C CR+C ++ E V V+ ++
Sbjct: 2 NGKSPLALYIH----------IPFCTKKCRYCSFYTIPYKSESVSLYCNAVI--QEGLRK 49
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
LA IQE + V F GG P ++SH L+++LK L
Sbjct: 50 LAPIQETHFVETVFFGGGTPSLVSHLDLKRILKEL 84
>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 349
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
CP C FC +R++ G T +S+ D E L+Y + K + EV F GG + +
Sbjct: 16 CPNDCVFCNQRKITGMS--TDISNSDVEDTILEYLSYFKRKDNV-EVAFYGGSFTAIPLE 72
Query: 161 RLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ LK K V+ +R +R P I+ +++ LK+ G
Sbjct: 73 EQSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYG 114
>gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 290
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 11/137 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++ C C +C ++ M G T + EAAL + WE +GG+P +
Sbjct: 8 VSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPFL 64
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L KRL +V K L H L + P+ R+ I+ E + ++H
Sbjct: 65 L--KRLPEVAKRLATAGHKVSLLTNLSAPL----RVLATFIEAAGEQLRTFSCSLHREEV 118
Query: 217 YE--FSEEAIAAISRLA 231
E F E+A A + LA
Sbjct: 119 EEAAFLEKAQAVQALLA 135
>gi|224107843|ref|XP_002314621.1| predicted protein [Populus trichocarpa]
gi|222863661|gb|EEF00792.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 34/176 (19%)
Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKD--------TEAALA---YIQEKSQIWEVIFTG- 151
C + C+FCF R+ GT++ K +A A E V+F G
Sbjct: 109 CAMNCQFCFTGRQANIFHFGTLMGLKRHLSTAEIIEQAVFAQRLLTNEVGPFTNVVFMGM 168
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL + + V+K + H Q L F R V + P+L + L E+ +A+
Sbjct: 169 GEPL----QNIDSVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKRFLHESN--CALAV 222
Query: 212 HANHPYEFSEEAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252
N + I I+R N G++L L + V+L+G+ND +
Sbjct: 223 SLNATTDEVRNWIMPINRKYNLGLLLQTLREELGLKNSYKVLFEYVMLEGVNDSDD 278
>gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
Length = 333
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G VH Y I + + C + C +C E + + SKD I K I +V
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFMEIMVKFGIKKV 65
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI------QCLK 201
TGG+PL+ + V+I+R +P ++ I + + LK
Sbjct: 66 RITGGEPLLRTD--------------IVEIVRGLGAIPEIEDISITTNAMYLAKKAEALK 111
Query: 202 EAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP 251
EAG V I++ + H F ++ + I + AG+ + VL+KG NDD
Sbjct: 112 EAGLTRVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDDE 171
Query: 252 EILANLMRTFVELRIKPYYLHH-PDLAAGTS 281
+ N ++ + I ++ + P AGTS
Sbjct: 172 --ITNFLQFTKDKDINIRFIEYMPIGHAGTS 200
>gi|292486525|ref|YP_003529391.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
CFBP1430]
gi|292897762|ref|YP_003537131.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
amylovora ATCC 49946]
gi|291197610|emb|CBJ44704.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
amylovora ATCC 49946]
gi|291551938|emb|CBA18975.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
CFBP1430]
Length = 457
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 92 RYPDRILLKLLHV--CPVYCRFCFRREMVGSQK---GTVLSSKDTE-AALAYIQEKSQIW 145
RYP R L LH+ C C FC + V Q+ L++ E AA A + ++ +
Sbjct: 47 RYPQRPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVS 106
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
++ + GG P L+ +++++++ LR +H I VDP+ I +++ L+ G
Sbjct: 107 QMHWGGGTPTFLNKQQIRRLMACLR--QHFHISDTAEISIEVDPREIELDVLDHLRAEGF 164
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD-----------P 251
+ + + +F+++ ++R+ + I L++++ L ++ + P
Sbjct: 165 NRLSMGVQ-----DFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQTP 219
Query: 252 EILANLMRTFVEL---RIKPY-YLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISGL 304
A ++ VEL R+ + Y H P L A R + + Q+ +A L++ I+ L
Sbjct: 220 ASFAFTLQKVVELDPDRLSIFNYAHMPALFAAQRKIREAELPDAQQKLAILQQTIATL 277
>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
Length = 470
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 105 CPVYCRFCFRREMVGSQKG---TVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159
C C +C +++ K T L + E AL Y+Q Q+ ++ F GG P LS
Sbjct: 74 CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ ++++ + +H Q++ +DP+++ + ++ L G
Sbjct: 134 AQMTRLMQAIG--RHFQLVPHGEYSIEIDPRKVTADNVKHLASLG 176
>gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
Length = 326
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C + CR+C V + + + S + + + + I +V TGG+PL+ + L +
Sbjct: 20 CNLRCRYCMPEAGVELKPHSEILSLEEIHRIIKVGTRVGIRKVRLTGGEPLV--RRNLSR 77
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--- 220
+++ +R I + V I + PE+ LKEAG + +++ +P ++S
Sbjct: 78 LVQMIRTIDLI------DDVAITTNGLLFPEMAGELKEAGLHRLNVSLDTMNPEKYSFIT 131
Query: 221 -----EEAIAAI-SRLANAGIILLSQSVLLKGINDD 250
++A+ AI + LA + +V+++GINDD
Sbjct: 132 RNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167
>gi|160902149|ref|YP_001567730.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
gi|160359793|gb|ABX31407.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
Length = 464
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 52 PNDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYP-DRILLKLLHVCPVYC 109
P R+F KE E N++ E +++ N L+ V RY +LL++ C + C
Sbjct: 23 PKKVYNRRFNAIKEFEKNLINERKKNYTEKNTSEELRTNVLRYGLQELLLEVTQNCNLQC 82
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE------------VIFTGGDPLIL 157
R+C E+ + L + + + A+ I + + F GG+PL+
Sbjct: 83 RYCIYSEVYPMYRNNTLRAMNEDIAIKAIDLYFSLLREGISYNPYREPTIGFYGGEPLL- 141
Query: 158 SHKRLQKVLKTLRYIK 173
+ + K ++Y+K
Sbjct: 142 ---NFELIKKCIKYVK 154
>gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
Length = 334
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
PLK R D I + + C + C +C E + Q + S + A++ + +
Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPMGV 63
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+V TGG+PL+ K L+ ++ + I+ VQ + + ++ P + LKEAG
Sbjct: 64 SKVRLTGGEPLV--RKDLETLVHQIASIEGVQDISLTTNGIML------PSKARLLKEAG 115
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
+ I++ + EE A I+R +L VL+KG N+
Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170
Query: 250 DPEILANLMRTFVELRI 266
D +R F+ L +
Sbjct: 171 DE------IRDFIALTL 181
>gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 500
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 29/196 (14%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHV---CPVYCRFCFRREMVGSQKGTVLSSK 129
E I D + GI + +L L+ V C + C CF V S+K S +
Sbjct: 69 ENPQTIADTDCPNNCGICDEHESHTVLGLIDVTNRCNLKCPVCFANAAV-SKKLYEPSYE 127
Query: 130 DTEAALAYIQEKSQIWE--VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
+ L ++ + + + GG+P + K L ++K + H QI R+
Sbjct: 128 EIRTMLRNLRNNRPVPTPAIQYAGGEPTV--RKDLVDLIKLAKEEGFSHTQIATNGVRLA 185
Query: 186 IVDPQRINPELIQCLKEAG-KPVYIAIHA--NHPY------EFSEEAIAAI--SRLANAG 234
+ P L Q LK+AG VY+ PY + I AI R AN G
Sbjct: 186 RL------PSLAQELKDAGLNTVYLQFDGVTEEPYLEIRQKDLLATKIKAIENCRKANLG 239
Query: 235 IILLSQSVLLKGINDD 250
I+L+ LLKGINDD
Sbjct: 240 IVLVP--TLLKGINDD 253
>gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
Length = 365
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 33/183 (18%)
Query: 105 CPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLIL 157
CP+ C FC F+R + + + ++ +++ I V+F G G+PL+
Sbjct: 135 CPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVG-------HDINNVVFMGMGEPLL- 186
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ V+K +R ++ R + I PE I+ L + G +Y+ + + P
Sbjct: 187 ---NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI-PEGIRRLADEGLDIYLCLSLHAPN 242
Query: 218 EFSEEAI----------AAISRL----ANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
I A S L G+ L + V+LK +ND P+ L F
Sbjct: 243 NELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELATLFSN 302
Query: 264 LRI 266
L++
Sbjct: 303 LQV 305
Searching..................................................done
Results from round 2
>gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale]
Length = 416
Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + KE+ + + + +A+TP +LI+P++PNDP+ +Q
Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 141 SDDS-MPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTY 365
>gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
OhILAs]
Length = 416
Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ +T+ +DL + E+ IKE + +TP A+L++ +PN P+ +Q
Sbjct: 23 WQVKNR-ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ + +DP+ ++ SP+ G+ HRYP+R+LL + +C +YCR C RR G
Sbjct: 82 VPIMTELHKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q T + +AA+ YI+ ++ +V+ +GGD L++S ++L+ ++ LR I+HV+I+R
Sbjct: 141 QNDTAMPMDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRL 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ P+++ H NHP E +EE A++ LA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND I+ +L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 SVLLRGVNDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSHNKVILRNYEGVITTY 366
>gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 352
Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats.
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF
Sbjct: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS
Sbjct: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF
Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ
Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK
Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS
Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
>gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
Length = 415
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 203/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + S +DL + E+ + +K+ +A+TP +L++ ++PN P+ +Q
Sbjct: 24 WQVKNR-IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+
Sbjct: 83 IPSIKEIHQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGA 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 SVLLRGINDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 367
>gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
Length = 413
Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 206/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + +L + E+ + I+E +A+TP LI+P NP+ PI +Q
Sbjct: 21 WQVKNR-IETVDELKKYIKLTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EEL P + EDP+ +++ SP+ G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 80 IPTVEELKRSPADLEDPLHEDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q K + + YI Q+ +V+ +GGD L++S ++L+ ++ LR I HV+I+R
Sbjct: 139 QHDCATPEKQIDDCIDYIARTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ P+++ H NHP E + E+ A +RLA+AGI L +Q
Sbjct: 199 GSRTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND I+ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 258 SVLLRGVNDCTHIMKKLVHELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + + + ++ ++ Y
Sbjct: 318 TSGYAVPTFVVDAPGGGGKIPVMPNYVISQAPNRVVLRNYEGVITTY 364
>gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
Length = 421
Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q
Sbjct: 23 WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 82 IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QK + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R
Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +Q
Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 260 SVLLRGINDCPSIMKHLVHELVKMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK + + + + ++ ++ Y S
Sbjct: 320 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQSPHRVVLRNYEGVITTYTEPS 370
>gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519]
gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii]
Length = 414
Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + E+ + +K + +A+TP +LI+ NPNDP+ +Q
Sbjct: 21 WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ ++EDP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 80 VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + +K +AA+ YI+ Q+ +V+ +GGD L++S ++L+ +K LR I HV+++R
Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AGI L +Q
Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQNHNKVILRNFEGVITTY 364
>gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 418
Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ +T+ + L + +++ + +K + +A+TP +LI+ + +DP+ +Q
Sbjct: 23 WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL+I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G
Sbjct: 82 IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q T + + +A + YI+ ++ +V+ +GGD L++S+++L+ ++ LR I+HV+I+R
Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E ++E+ A +RLA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL G+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK + + + G + ++ ++ Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366
>gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
Length = 421
Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats.
Identities = 127/347 (36%), Positives = 213/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q
Sbjct: 23 WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 82 IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QK + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R
Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +Q
Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 260 SVLLRGINDCPSIMMHLVHELVKMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + + ++ ++ Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPTYVISQSPHRVVLRNYEGVITTY 366
>gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate).
gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
Aminomutase From Clostridium Subterminale Sb4, With
Michaelis Analog (L-Alpha-Lysine External Aldimine Form
Of Pyridoxal-5'-Phosphate)
Length = 416
Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 204/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + KE+ + + + A+TP +LI+P++PNDP+ +Q
Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + C YCR C RR G
Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAGQ 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R
Sbjct: 141 SDDSXP-XERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK + + + + + + ++ Y
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVXPNYVISQSHDKVILRNFEGVITTY 365
>gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
Length = 418
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 211/351 (60%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + DL + E+ + ++E +A+TP +LI+P++PNDP+ +Q
Sbjct: 23 WQVKNR-IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQS 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL I E++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 82 VPTANELIISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QK + + A+ YI+ ++ +V+ +GGD L++S ++ +L+ LR I HV+I+RF
Sbjct: 141 QKDAASPRERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRF 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A RLANAG+ L +Q
Sbjct: 201 GSRTPVVLPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 260 TVLLRGINDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG P +++D PGG GK+ + + I + ++ ++ Y +
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYIVSQAPNRVVLRNYEGVLTTYTEPA 370
>gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
Length = 419
Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 199/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + +DL + +E+ + + + +A+TP +LI+ +PN P+ +Q
Sbjct: 24 WQVRNR-IETLEDLKQFANLSEEESEGVVKTLETLRMAITPYYFSLIDLEDPNCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 83 IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 143 SDDS-MPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367
>gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
Length = 454
Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 202/350 (57%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + E+ + ++ + + +TP A+L++P +P+DP+ Q
Sbjct: 30 WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 89 VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R
Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H NHP E + EA A LANAG+ L +Q
Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND + L++ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D P G GK+ + + I + + + ++ YP
Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYPEP 376
>gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
Length = 419
Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + DL + E+ + + + +A+TP +LI+ +PN P+ +Q
Sbjct: 24 WQVRNR-IETLDDLKQFANLSDEESEGVVKTLETLRMAITPYYFSLIDLDDPNCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 83 IPTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R
Sbjct: 143 SDDS-MPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367
>gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 426
Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats.
Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T+ + L I KE+ + IK +A+TP A L++P NP PI RQ
Sbjct: 23 WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ++EL + + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 82 VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + ++ + A+ YI+E Q+ +V+ +GGD L++ L+ +LK LR I HV+I+R
Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+++ + + + + ++ ++ Y
Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366
>gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 420
Score = 503 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 205/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T + L + +E+ + IK+ +A+TP A+L++ +P+ PI R
Sbjct: 25 WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELN + EDP+ +++ SP++GI HRYPDR+L + C +YCR C RR + GS
Sbjct: 84 VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI+ Q+ +V+ +GGD L++S +RL+ +L L I+HV+I+R
Sbjct: 144 -TDKAAPIEVIDKAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVRI 202
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI LI LK+ P+++ H NHP E + EA A+++LA+AGI L +Q
Sbjct: 203 GTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGNQ 261
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P + L+ V+ R++PYY++ DL+ G HFR ++ G +I+ SL+
Sbjct: 262 SVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRGH 321
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + S + ++ ++ Y
Sbjct: 322 TSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368
>gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 414
Score = 503 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 211/352 (59%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + +DL + ++ + I+E + +TP A+L++ + N P+ Q
Sbjct: 23 WQVKNR-IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL++ + +DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 VPIMSELSMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + + +AA+ YI + QI +V+ +GGD L+ S +RL+ ++ LR I+HV+I+R
Sbjct: 141 QQDSGMPLDRIDAAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRL 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+V PQRI P L+ LK+ P+++ H NH E ++E+ AI LANAGI L +Q
Sbjct: 201 GSRVPVVMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 SVLLKGVNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + N + ++ ++ Y S
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTYTEPES 371
>gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
Length = 425
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q
Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + G + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367
>gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
Length = 425
Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q
Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + G + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367
>gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551]
gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551]
Length = 470
Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats.
Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
Length = 425
Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 198/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q
Sbjct: 24 WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
Length = 416
Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 128/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + + L + E+ + +KE +A+TP +LI+P NPN PI +Q
Sbjct: 23 WQVLNR-IETLDQLKKYVTLTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EL PE++ DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G
Sbjct: 82 IPTHQELVRAPEDQVDPLSEDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
QK S+ + + YI + +V+ +GGD L++S +RL+ +LK LR I HV+I+R
Sbjct: 141 QKDASSPSERIDRCIDYIANTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI P+L+ LK+ PV++ H NHP E +EEA+ A R+ANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPQLVDMLKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 260 TVLLRGINDCTHVMKRLVHLLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + + + ++ ++ Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSPRHVVLRNYEGVITTY 366
>gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 423
Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats.
Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++
Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372
>gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
Length = 425
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 197/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q
Sbjct: 24 WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIYQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319]
gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319]
Length = 470
Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP S
Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379
>gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
Length = 417
Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 210/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++
Sbjct: 23 WQIANR-IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL PE+ DP+ ++ SP+ G+ HRYPDR+L+ + C +YCR C RR G
Sbjct: 82 VPTIHELYQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E + YI+ QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 141 ETDAPMPMDKIEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S VP+V P RI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q
Sbjct: 201 GSSVPVVLPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ L+
Sbjct: 260 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366
>gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
Length = 414
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 126/354 (35%), Positives = 205/354 (57%), Gaps = 5/354 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH+ + + ++L + + + ++IK+ + +A++P A+LI+P +PN PI Q
Sbjct: 16 WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V
Sbjct: 75 VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + S K + YI+E S+I +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 135 G-NREYDYSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP+ PQRI PEL + L++ V++ H NHP E + EA A+ LA AG+ L
Sbjct: 194 RLGSRVPVTLPQRITPELCEILEKYP-SVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+G+ND P I+ L ++++ +PYYL+ DL+ G HFR + G +I+ L+
Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYPEPEA 366
>gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
Length = 466
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377
>gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
Length = 466
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q
Sbjct: 31 WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377
>gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 423
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + + ++L + +E+ I + +A+TP +LI+P++PNDPI ++
Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G
Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372
>gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 425
Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 199/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q
Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
Length = 472
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 205/350 (58%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + +L + +E+ + ++ + + +TP A+L+NP NP PI Q
Sbjct: 31 WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + ++ YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEP 377
>gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
Length = 469
Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q
Sbjct: 31 WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +I+D PGG GK+ + + I + + + ++ YP +
Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379
>gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 471
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 207/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYPEPEN 379
>gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
Length = 471
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580]
gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2]
gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580]
gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2]
Length = 469
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 120/352 (34%), Positives = 204/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + +DL + KE+ + ++ + + +TP A+L+NP +P PI Q
Sbjct: 31 WQLTN-TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLAEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI++ + +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L LK+ PV++ H N E ++EA A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ I + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYPEPEN 379
>gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195]
Length = 471
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYPEPEN 379
>gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
Length = 425
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q
Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q
Sbjct: 202 GTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + G + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367
>gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 425
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q
Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY]
gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
Full=KAM
gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis]
gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
Length = 469
Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q
Sbjct: 31 WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +EE+ A L+NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +I+D PGG GK+ + + I + + + ++ YP +
Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379
>gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
Length = 425
Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q
Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 416
Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T + L + ++ + I++ +A+TP A+L++ +P+ PI RQ
Sbjct: 21 WQLKNR-ITDLESLKEIINLTDKEEEGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELN + EDP+ ++ SP++GI HRYPDR+L + C +YCR C RR + G+
Sbjct: 80 VPSSLELNFGDSDLEDPLSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGT 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI+ ++ +V+ +GGD LI+S +RL+ +L L I+HV+I+R
Sbjct: 140 -TDKAAPKEVVDNAIEYIKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L+ LK+ PV++ H NHP E + EA A+++LA+AGI L +Q
Sbjct: 199 GTRAPVVLPQRITDDLVSILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND P + NL+ V+ R++PYY++ DL+ G HFR ++ G +IV L+
Sbjct: 258 SVLLKGINDCPGTMKNLVHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + S + ++ ++ Y
Sbjct: 318 TSGFAVPTYVVDAPGGGGKIPVMPQYLISQSPESVILRNYEGVIAKY 364
>gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13]
Length = 473
Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P PI Q
Sbjct: 31 WQLTN-TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI QI + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +EE+ A L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + I + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYPEPEN 379
>gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
Length = 495
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 119/352 (33%), Positives = 203/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P P+ Q
Sbjct: 55 WQLTN-TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 113
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 114 VPISQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 172
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+ ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R
Sbjct: 173 QIGMGVPKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRI 232
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ P+++ H N E +EEA A LA+AG+ + +Q
Sbjct: 233 GTRAPVVFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQ 291
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 292 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 351
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 352 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYPEPEN 403
>gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 482
Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q
Sbjct: 41 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 159 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389
>gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
Length = 425
Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q
Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS
Sbjct: 83 IPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + + ++ Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367
>gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
Length = 482
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q
Sbjct: 41 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI + Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 159 QIGMGVPKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389
>gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 427
Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 205/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ ++S +L + + I++ + + +A+TP A+LIN + PI Q
Sbjct: 21 WQLRNRIMSS-DELDQYANLSVYEKASIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EL + +DP+ ++ SP G+ HRYPDR+LL + + C +YCR C R+ VG
Sbjct: 80 IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V D A+ YI+ I +V+ +GGDP +LS RL+++++ +R I HVQ++R
Sbjct: 140 -NEKVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L++ LK+ P++I H NHP EF+EE+ A+++LA+AGI L +Q
Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND I+ L V R++PYYL+ DL+ G HFR + +G +I+ +L
Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + ++ ++ Y ++
Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPVLPNYQLSSTSTKTVLRNYEGVICIYEEPAN 369
>gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
Length = 419
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 124/353 (35%), Positives = 201/353 (56%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ +T+ ++L + + +IK+ +S+A++P A+LI+P +P PI Q
Sbjct: 21 WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P EL E EDP+ ++ SP K I HRYPDR+L + + C +YCR C R+ V
Sbjct: 80 VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + S K + YI+E ++ +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 140 G-NREYDYSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+ PQRI PEL + L + V++ H NHP E + EA A+ LA AGI L
Sbjct: 199 RIGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITSEAKKAMGMLARAGIPLG 257
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+G+ND P I+ L + ++ +PYYL+ DL+ G HFR ++ G +I+ L+
Sbjct: 258 NQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYPEPA 370
>gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus
NVH 391-98]
Length = 472
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
Length = 476
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 119/352 (33%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + ++ + + +TP A+L+NP +P PI Q
Sbjct: 31 WQLTN-TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA++YI+ Q+ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +E++ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 SVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
Length = 411
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 202/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + + L + E+ + +KE +A+TP +LI+ NPN P+ +Q
Sbjct: 22 WQVQNR-IETLEQLKKYIKLTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E + + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 81 IPTHAETHHSAADLLDPLHEDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG- 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + S D A+ YI Q+ +V+ +GGD L++S RL+ ++ LR I HV+I+R
Sbjct: 140 QTDSSSSKDDISKAIDYIARTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L+ LK+ P+++ H NHP E +EE+IAA R+ANAGI L +Q
Sbjct: 200 GTRTPVVCPQRITDDLVNMLKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 259 SVLLRGVNDCVPTMKKLVHQLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + G + + ++ Y
Sbjct: 319 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQGPHKVILRNFEGVITTY 365
>gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168]
Length = 471
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 117/352 (33%), Positives = 205/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q
Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ S + G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379
>gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42]
gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42]
Length = 473
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 206/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L + LK+ PV++ H N E +EE++AA +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208]
gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3]
Length = 473
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 122/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
nodosum Rt17-B1]
Length = 422
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 211/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + L + E+ + ++ +A+TP A+L++P NP PI RQ
Sbjct: 24 WQIRNRIM-DVDTLKQVINLTPEEEEGVRNALKTLRMAITPYYASLMDPDNPKCPIRRQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + DP+ ++ SP+ G+ HRYPDR+L+ + +C +YCR C RR G
Sbjct: 83 VPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDRVLMLVTDMCSMYCRHCTRRRFAG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + ++ +A + Y++E Q+ +V+ +GGD L++ + L+ +LK LR IKHV+I+R
Sbjct: 142 QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLLVGIEMLEYILKELRKIKHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQ I PEL LK+ P++I H NHP E + E+ A LA+AGI L +Q
Sbjct: 202 GTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHPKEITPESSRACEMLADAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P I+ L+ V++R++PYY++ DL+ G +HFR ++++G +I+ +L
Sbjct: 261 SVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGLTHFRTSVKKGLEIMEALIGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P++++D P G GK+++ + + + + + + ++ ++ Y
Sbjct: 321 TSGFCVPWFVVDAPAGGGKIRVMPNYVISMSDHTVILRNYEGVIVAY 367
>gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 437
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH K L + + L + + ++Q + + + I++TP +LIN + NDP+
Sbjct: 28 WQMRHSIKDLETFEALLDV-KLSEKQRKAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELNI+ + DP+ +++ SP + HRYPDR+LL + +VCP+YCR C R+
Sbjct: 87 LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ E + YI+ QI +V+ +GGDP +LS L +L LR I+HV+I
Sbjct: 147 VGDE-DTIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI +L+ LK+ +PV++ H NH E ++ A A+ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
Length = 468
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 201/350 (57%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + + +TP A+L+NP +P PI Q
Sbjct: 30 WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 89 VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+ YI + + +V+ +GGD L+++ + L+ +LK LR I HV+I+R
Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E ++EA A +L +AG+ + +Q
Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V +R++PYY++ DL+ G SHFR I +G +I+ +L+
Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GKV + + I + + ++ YP
Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYPEP 376
>gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265]
gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265]
Length = 441
Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 207/355 (58%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+R+ + L + + L + EQ + + + + +++TP +LIN + NDP+
Sbjct: 28 WQMRNSIRDLKTYESLLGI-KLSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P EL+ILP + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 LQSVPSPRELHILPGDMADPLHEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q T+ S A + YI++ ++ +V+ +GGDP +LS + L +L LR I HV+I
Sbjct: 147 VGDQ-DTIPSRAAISAGIEYIRQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI PEL+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPELVAMLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
Length = 473
Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q
Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R PIV PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q
Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + I + ++ YP +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379
>gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
Length = 473
Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
Length = 473
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
Length = 473
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 423
Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T+ L + KE+ + I++ +A+TP A+L++P NP PI RQ
Sbjct: 23 WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 141 QHDRTRTKSEIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQ + EL LK+ P++I + NHP E + E+ A LA+AGI L +Q
Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G SHFR +I G KI+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D P G GK+++ + N + + ++ ++ Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366
>gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012]
gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066]
gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055]
gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North
America USA6153]
gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B]
gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum]
gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94]
gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI]
gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI]
gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 473
Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 473
Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
Length = 473
Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
Length = 473
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
TMO]
Length = 419
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 132/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ + + L + ++ + ++ +A+TP A L++P NP PI Q
Sbjct: 23 WQLRNRIM-NLDVLQEVVNLTDQEREGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +ELNI EE DP+ ++ SP+KG+ HRYPDR+LL + C +YCR C RR G
Sbjct: 82 IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + LS + +A+ YI++ +I +V+ +GGDPL LS ++L+ ++ +R I+HV+I+R
Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V P RI EL LK+ P+++ H NHP E + ++ A+S LA+AGI L +Q
Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P+I+ L+ V+ R++PYY++ DL+ G SHFR T+ +G +I+ L+
Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ ++ + +G G + ++ + Y
Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366
>gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 473
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
Length = 419
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 203/353 (57%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ +T+ ++L L+ + +IK+ + +A++P A+LI+P +P P+ Q
Sbjct: 21 WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+PQ EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V
Sbjct: 80 VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + S K + YI+ ++ +V+ +GGD L++S +RL +L L I HV+I+
Sbjct: 140 G-NREHDYSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R P+ PQRI PEL + L + V++ H NHP E + EA A++ LA AGI L
Sbjct: 199 RLGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITPEAKKAMNMLACAGIPLG 257
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+ +ND P I+ NL ++++ +PYYL+ DL+ G HFR ++ G +I+ L+
Sbjct: 258 NQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + + + ++ ++ YP +
Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYPEPA 370
>gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
Length = 435
Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH + + S ++L + +E+ E+++ H+ + +TP +LI+ + NDP+
Sbjct: 29 WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P EELN+ + DP+ + SP+ GI HRYPDR+L + +VC +YCR C R+
Sbjct: 88 KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + + + YI++ I +V+ +GGDPL+L L +L L I HV++
Sbjct: 148 VG-NVDYIPDRETILKGIDYIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNIPHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V P RI +L++ LK P++I H NHP E + + A+ +LA+AGI L
Sbjct: 207 VRIGTRVPVVLPCRITDDLVEMLKGH-HPLWINTHFNHPKEVTPASREALRKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q VLL G+ND P+I+ L + V+ R++PYY+ DL+ G SHFR ++ +G +I+ +L
Sbjct: 266 GNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIEIIENL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 326 VGHTSGFAVPTYVVDAPGGGGKIPVMPNYLISSATNKVVMRNYEGVITTY 375
>gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
NCIB 8327]
Length = 440
Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats.
Identities = 129/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH + L + + L + + EQ E + ++ TP +LIN + NDP+
Sbjct: 28 WQMRHSIRDLDTFERLLDI-TLSDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ + +A + YI+ Q+ +V+ +GGDP +LS + L +L LR I+HV+I
Sbjct: 147 VGDE-DTIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI PEL+ L + +PV++ H NHP E ++ A A++RLA+ G+ L
Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
ATCC 27725]
Length = 382
Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 114/334 (34%), Positives = 194/334 (58%), Gaps = 2/334 (0%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
L + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E++ +
Sbjct: 3 LKKYITLSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEAD 62
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + +
Sbjct: 63 LLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDD-AMPMDRIDK 121
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V PQRI
Sbjct: 122 AIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRIT 181
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
PEL++ LK+ P+++ H NHP E + E+ A +ANAGI L +QSVLL+GIND +
Sbjct: 182 PELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHV 240
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 241 MKRLVHDLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDA 300
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
PGG GK + + + + ++ Y
Sbjct: 301 PGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 334
>gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 473
Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
Length = 423
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ +T L + E+ + I+ +A+TP A+L++P NP PI RQ
Sbjct: 23 WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + ++ +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R
Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQ + EL LK+ P+++ H NHP E + E+ A LA+AGI L +Q
Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYYL+ DL+ G SHFR +I G +I+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D P G GK+++ + + + + ++ ++ Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPEYLISYSDKTAILRNYEGVIVAY 366
>gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
Length = 424
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 198/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ +T+ L + E+ + I + + ++P A LI+P +PNDP+ +Q
Sbjct: 23 WQVKNR-ITTIDQLKKIINLLPEEEEAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL+ + DP+ ++ SP+ G+ H YPDR+LL + +C +YCR C RR G
Sbjct: 82 VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + AL YI+ + +V+ +GGD ++S + + +LK LR I HV+I+RF
Sbjct: 141 HTDNSMPQNRIDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V+P RI L+ LK+ P+++ H NHP E +E +I A +LANAGI + +Q
Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND I +L+ V++R++PYYL+ DL+ G HFR + +G +I+ L+
Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + + ++ ++ Y
Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPVMPQYLISQSPTKVVLRNYEGVITTY 366
>gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 438
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 118/355 (33%), Positives = 204/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
Q RH T+ + +D + I E+ E+K + +A+TP A+LI+ N +DP+
Sbjct: 29 WQFRH-TIKTVEDFEDVLNISFSPEEKKEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q EEL++ E DP+ +++ SP++ + HRYPDR+L + ++C +YCR C R+
Sbjct: 88 KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q + + L YI+E ++ +V+ +GGDP +LS ++ +L + I+HV++
Sbjct: 148 VGDQ-DHIPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P RI +LI L + ++I H NHP E ++ + A+ +L AGI +
Sbjct: 207 IRIGTRMPVVLPYRITEDLIDILSKYD-NLWINTHFNHPRELTDSSRQALKKLVKAGIPM 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P I+ +LM V+ R++PYY++ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTYKEPDS 380
>gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
Length = 403
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ LTS +L + E+ ++ S+A+TP NLI+ +PN PI +Q
Sbjct: 30 WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E+ + EE+ D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+ ++ +V+ +GGDPL+LS ++L+ ++ LR I HV+ +R
Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP E + E A RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+NDD E++ L+ + +R++PYYL+ DL G SHF++ + +G +I+ +L+
Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV I+ ++K+ + + YP KS+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378
>gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
retbaense DSM 5692]
Length = 440
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 203/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QLRH L + + L + E+ + + + +++TP +LI+ + NDP+
Sbjct: 29 WQLRHSISDLATVEKLLDIEF-DPEKRKQYAKTMEIFPMSVTPYYLSLIDTEDYENDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q IP +EL+I + +DP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 88 KQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG V D +A L YI+ Q+ +V+ +GGDP +L ++ +L LR I+HV++
Sbjct: 148 VGDS-DFVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI L+ LK+ P+++ H NHP E ++ + A+++LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L+ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + I G + ++ ++ Y
Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375
>gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 451
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
Length = 473
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
Length = 436
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ +T + L + E+ IK +A+TP A L++P NP PI RQ
Sbjct: 26 WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL P ++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 85 VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + +A+L YI++ Q+ +V+ +GGD L+ L+ +L L+ I HV+++R
Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V PQ I L+ LK+ P+++ NHP E + E+ A +LA+AGI L +Q
Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND I+ L+ V++R++PYYL+ DL+ G HFR ++ +G +I+ SL
Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK++I + + + + ++ ++ Y
Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369
>gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
colombiense DSM 12261]
Length = 433
Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 206/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ +T A+ L + K ++ IK N +A+TP A+LIN ++P+ PI +Q
Sbjct: 28 WQMANR-ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQC 86
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E I+ ++ DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G
Sbjct: 87 IPTLQETLIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG- 145
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q S K+ EA + YI++ I +V+ +GGDPL LS R++ +L+ +R I HV+I+R
Sbjct: 146 QTDLPRSEKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V P RI L LK+ P+++ + NHP E + E+ A +LANAGI L +Q
Sbjct: 206 GTRVPVVMPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQ 264
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND P I L + +++R++PYY++ DL+ G HFR +I +G +I+ L+
Sbjct: 265 SVLLKGINDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGH 324
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D PGG GK+ + + + + + + ++ Y
Sbjct: 325 TSGLAVPTFVVDAPGGGGKIPVMPNYVVSRSDRKTVLRNFEGVLTVY 371
>gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 437
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+ K + S D I+ E +I++ + + +++TP +LIN + NDP+
Sbjct: 30 WQM-SKCIKSVDDFEQLLGIEFEPEYRKKIEQTVDTFPLSITPYYLSLINTDDYANDPVF 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P EEL +L + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+
Sbjct: 89 RQAFPVPEELQVLDHDMADPLAEDQDSPAPGITHRYPDRVLFHISNICSMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q TV ++ EA L YI+ + +V+ +GGDPL+LS L +L L I+HVQ+
Sbjct: 149 VGDQ-DTVPGREEIEAGLEYIRNNPVVRDVLLSGGDPLMLSDDHLDWILTELDQIEHVQV 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P RI +L+ LK+ P+++ H NHP E + + A+ +LA+AGI L
Sbjct: 208 VRLGTRMPVVLPYRITDDLVAVLKKH-HPIWVNTHFNHPREMTTSSKEAVRKLADAGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 267 GNQSVLLAGVNDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLNHFRTPVGKGIEIMESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ SG P Y++D PGG GK+ ++ + + + + ++ ++ Y S
Sbjct: 327 RGHTSGFSVPTYVVDAPGGGGKIPLNPNYLVSLSTNKVVLRNYEGVITTYKEPDS 381
>gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
Length = 478
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 115/352 (32%), Positives = 197/352 (55%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P PI Q
Sbjct: 31 WQLTN-TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIGEEIYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI+ ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +EE+ A L N+G+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ L + V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D P G GK+ + + + + + ++ YP +
Sbjct: 328 TSGYSVPTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYPEPEN 379
>gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
aestuarii DSM 271]
Length = 437
Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+R+ + L + + L N + +Q + E + +++TP +LIN + NDP+
Sbjct: 28 WQMRNSIRDLDTFETLLNI-TLSPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ +P EL+I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q T+ + + YI+ I +V+ +GGDP +L L +L+ LR I+HV+I
Sbjct: 147 VGDQ-DTIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI PEL+Q L++ +PV++ H NH E ++ A A+S LA+ GI L
Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
Length = 462
Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q
Sbjct: 32 WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G
Sbjct: 91 VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R
Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +Q
Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYPE 377
>gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905]
gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905]
Length = 462
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q
Sbjct: 32 WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G
Sbjct: 91 VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R
Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +Q
Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
SG P +++D P G GK+ + + I + ++ ++ YP
Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYPE 377
>gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
Length = 472
Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus
weihenstephanensis KBAB4]
gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
Length = 472
Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
Length = 478
Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379
>gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4]
Length = 468
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 204/350 (58%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + +K + + +TP A L+N ++P PI Q
Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPLGQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI++ I +V+ +GGD L+++ + L+ ++K+LR I H++I+R
Sbjct: 149 QIGMGVPKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRL 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L+ LK+ PV++ H N E ++EA A +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+
Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + G+ + + ++ YP
Sbjct: 328 TSGYAVPAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYPEP 377
>gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
Nankai-3]
Length = 437
Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 201/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL++ + + + +++ +++ E++E ++ + +++TP A+LI+ N DPI
Sbjct: 30 WQLKNSIRDIDTFEEVIGIKF-HEDEKAELQEAADVFPLSITPYYASLIDVKNFREDPIF 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q EEL E DP+ ++ SP+ G+ HRYPDRIL + H C VYCR C R+
Sbjct: 89 KQSFVGVEELITENFEMADPLAEDKDSPVPGLTHRYPDRILFYISHACAVYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ S K E L YI+ QI +V+ +GGDPL+L L +L L I H+++
Sbjct: 149 VGD-TDSIPSKKQIEKGLDYIRNNPQIRDVLLSGGDPLLLPDDYLDWILTELWSIPHIEV 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V P RI EL+ LK+ P++I H NH E ++ + A+ +LA+ GI L
Sbjct: 208 IRIGTRVPVVLPYRITDELVNMLKKH-HPLWINTHFNHIKEITKSSKNALRKLADVGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL+G+ND P ++ L + R++PYYL DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQSVLLRGVNDCPNVIKKLNQKLAANRVRPYYLFQCDLSEGLSHFRTSVRKGVEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + G + ++ ++ Y
Sbjct: 327 IGHTSGFAVPRYVVDAPGGGGKIPVMPNYVISWGTDRVILRNYEGVITTY 376
>gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
Length = 472
Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q
Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379
>gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
Length = 439
Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 129/355 (36%), Positives = 209/355 (58%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QLR+ ++ S + + I+ ++ +IKE + +++TP +LIN + NDPI
Sbjct: 30 WQLRN-SIKSVEQFESLLGIEMDEKYRKKIKETLRKFPLSITPYYLSLINSEDYSNDPIF 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P +EL+I P + EDP+ ++ SP+ I HRYPDR+LL++ + C +YCR C R+
Sbjct: 89 IQSFPSPKELDISPHDMEDPLAEDKDSPVPNITHRYPDRVLLQVSNTCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ ++ + YI++ I +V+ +GGDPL+LS L +L LR I HVQ+
Sbjct: 149 VGD-VDSIPLKQEILNGIEYIRQTPVIRDVLLSGGDPLMLSDDYLDWILSELRTIPHVQV 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P R+ L+ LK+ P+++ H NHP E + A+++LANAGI L
Sbjct: 208 IRIGSRMPVVLPYRVTDSLVAMLKKH-HPLWVNTHFNHPREVTASTREALAKLANAGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ +L+ VE R++PYYL+ DLA G +HFR + +G +I+ SL
Sbjct: 267 GNQSVLLAGVNDCPRIMKSLVHKLVENRVRPYYLYQCDLAEGLNHFRTPVGKGIEILESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ SG P Y++D PGG GK+ ++ + + + ++ ++ Y S
Sbjct: 327 RGHTSGFAVPTYVVDAPGGGGKIPLNPNYLVSFSTNKVILRNYEGVITTYQEPDS 381
>gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 435
Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 126/355 (35%), Positives = 202/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H + + + + L N E+ +++KE + +++TP +LI+ + NDPI
Sbjct: 29 WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EEL I +E EDP+ ++ SP++GI HRYPDR+L + +VC +YCR C R+
Sbjct: 88 LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + + + YI+ QI +V+ +GGDPL+LS L +L + I HV++
Sbjct: 148 VGD-IDYIPEKEKILEGIEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI EL+ LK+ P+++ H NHP E + + A+ +LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND I+ L+ V+ R++PYYL+ DL+ G SHFR I +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D P G GK+ + + I + ++ ++ Y S
Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSYKEPES 380
>gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
Length = 468
Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 198/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + T+ + DL + E+ + ++ + + +TP A L+N + PI Q
Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQS 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 90 VPIGKEIHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R
Sbjct: 149 QIGMGVPKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRI 208
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI L LK+ PV++ H N E +EE+ A L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQ 267
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ + + + + + ++ YP +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYPEPEN 379
>gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
polytropus DSM 2926]
Length = 716
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 202/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QL+H ++ + L + + + +++ + A TP +LI+ + NDP+
Sbjct: 28 WQLKH-SIKDIETLESVFDVELDAKDKKSMQKTIEQFPFAATPYYLSLIDIGDYKNDPVY 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q +P EELN+ + DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+
Sbjct: 87 KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + + + YI+ ++I +V+ +GGDP +LS L +L ++ I HV++
Sbjct: 147 VGDM-DNIPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVEV 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI LI LK+ P++I H NHP EF+EE+ +ISRLA+AGI L
Sbjct: 206 IRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL +ND P+I+ L+ V RI+PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + ++ ++ Y
Sbjct: 325 IGHTSGFAIPRYVIDAPGGGGKIPVMPSYLISWSQNKVILRNYEGVITTY 374
>gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 435
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 197/350 (56%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H T+ DL +K+ ++ + + +TP A ++ +P+ PI Q
Sbjct: 24 WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G
Sbjct: 83 VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q G + K +A + YI+ Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R
Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L LK+ PV++ H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+V+L GIND P I+ L V++R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P +++D PGG GK+ + + + + + + ++ YP
Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYPEP 370
>gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 453
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
Q+RH +++ Q + ++ +E++ + I++TP +LI+ + NDPI
Sbjct: 43 WQVRHAVRSIDMVQQVLGI-TFDPKEREELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P EL + E DP+ ++ SP + I HRYPDR+L + + C +YCR C R+
Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG K ++ + +AYI+E +QI +V+ +GGDP +LS + L +L L I HV++
Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V P RI +L+ LK+ KP++I NHP E + A AA+++L +AGI L
Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL IND P I+ L+ V+ RI+PYYL+ DL+ G SHFR I +G +I+ SL
Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + ++ I+ Y
Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389
>gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium
phytofermentans ISDg]
Length = 393
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 135/350 (38%), Positives = 221/350 (63%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ +T+ +L + + +++ EI + + +A+TP A+L++P + N PI Q
Sbjct: 21 WQFRNR-ITTVAELTESIDLTEQEKQEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E ILP E DP+ + SP+ GIVHRYPDR+L + H C +YCR C RR +VG
Sbjct: 80 VPSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG- 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R
Sbjct: 139 EEDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRI 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V P RI EL L+ +P++I H NHP E +++++ A +RL +AGI L +Q
Sbjct: 199 GTRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND +I+ +L+ V+ RI+PYYL+ DL+ G HFR +E G +++ L+
Sbjct: 258 SVLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGY 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
ISG P +++D PGG GK+ ++ I + + + ++ ++ YP
Sbjct: 318 ISGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYPQP 367
>gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 437
Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 121/355 (34%), Positives = 203/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
+R+ T+ + I + + + + +A+TP +LI+ + NDP+
Sbjct: 29 WHVRN-TIRTVSGFEKVLGIKFSDSERKKHEMTLRKFPLAITPYYLSLIDEEDYENDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+
Sbjct: 88 LQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRYPDRVLFHISNLCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q ++ S+ E + YI+ Q+ +V+ +GGDP +LS ++L +L + I+HV++
Sbjct: 148 VGDQ-DSIPSTSQLEKGIEYIRNTPQVRDVLLSGGDPFMLSDEKLDWILTKIGEIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P RI +L+ LK+ P++I H NHP E ++ + AI++LA+AGI L
Sbjct: 207 VRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHFNHPREVTDSSRRAIAKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L + V+ R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ SG P Y++D PGG GK+ + + I + ++ ++ Y S
Sbjct: 326 RGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATNKVVLRNYEGVITTYTEPDS 380
>gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2]
gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2]
Length = 436
Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q++H K++ + L + EQ +K+ + + +++TP +LIN + +DPI
Sbjct: 28 WQIKHCVKSIDLLESLLEI-KLPFEQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ + EL ++ +DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+
Sbjct: 87 RQSVASVRELEFSNDDMKDPLHEDKDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ ++ A + YI+ +I +V+ +GGDPL+LS L +L L I+HV++
Sbjct: 147 VGD-VDSIPGKQEILAGIDYIRNNPEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEV 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI + LK P++I H NHP E + A A+++LANAGI L
Sbjct: 206 IRIGTRTPVVLPYRITDAMTNMLKRH-HPIWINTHFNHPREVTASARDALTKLANAGIPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 265 GNQTVLLAGVNDCPRIMRSLVHKLVLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVILRNYEGVITTY 374
>gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
acidaminovorans]
Length = 415
Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ +T+ L ++ E+ K+ + + +A+TP +LI+ NP DPI Q
Sbjct: 21 WQIKNR-ITTHAQLSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E +I P + DP+ ++ +P+ G+ HRYPDR+LL L C +YCR C RR G
Sbjct: 80 IPRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAG- 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ E AL YI+E ++ +VI +GGDPL LS +RL +L L I+H++I+R
Sbjct: 139 EHDAPMPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRL 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQR L+ L++ K V++ H NHP E E++ A++++A GI + +Q
Sbjct: 199 GTRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+ND+ +++ L+ V+ R++PYY++ DL+ G SHFR I +G +I+ SL+
Sbjct: 258 SVLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGLC P Y++D PGG GK+ + + + G + ++ + Y
Sbjct: 318 TSGLCVPTYVVDAPGGGGKIPVMPNYVISQMPGRVILRNYEGFITAY 364
>gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380]
gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 457
Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 204/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
+H + + + + + + + + + + +++TP A+LI+P + NDP+
Sbjct: 49 WHAKHAIQDIDTFERITGI-KLDPKFRENVALTLEKFPLSITPYYASLIDPEDYQNDPVF 107
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EL + P E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+
Sbjct: 108 IQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 167
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG Q ++ ++ + L YI E QI +V+ +GGDPL+LS + L +L LR I HVQ+
Sbjct: 168 VGDQ-DSIPGREEIKQGLEYIAENPQIRDVLLSGGDPLMLSDEYLDWILTALRNIPHVQV 226
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P RI +L+ L++ PV++ H NHP E + A AA+ +LA+AGI L
Sbjct: 227 IRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHFNHPRELTSSARAALRKLADAGIPL 285
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P I+ LM V+ R++PYYL+ DL+ G HFR + +G +I+ SL
Sbjct: 286 GNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQCDLSEGLMHFRTPVGKGIEIMESL 345
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ ++ + + + + ++ ++ Y
Sbjct: 346 IGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTNKVILRNYEGVITTY 395
>gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 423
Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 202/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ LT+ ++L + + + + + +A+TP A L+NP + N PI Q
Sbjct: 23 WQLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL E EDP+ ++ SP G+ HRYPDR+LL + C +YCR C RR M G+
Sbjct: 82 IPTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGT 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L D + AL YI+ I +V+ +GGD L++S L +L LR I+HV+I+R
Sbjct: 142 -NDQALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQR+ PEL LK+ P++I H NHP E ++EA A+S LA+AGI L +Q
Sbjct: 201 GTRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P + L + + RI+PYYL+ DL+ G HFR ++ +G +I+ L+
Sbjct: 260 SVLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 320 TSGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366
>gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 416
Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 206/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + L + ++ + I+E +A+TP +LI+P NP PI +Q
Sbjct: 22 WQVKNR-IETLDQLKKYIRLTPDEEEGIRESLKTLRMAITPYYLSLIDPDNPYCPIRKQS 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ P + EDP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G
Sbjct: 81 VPTIEELHRSPADLEDPLHEDGDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + YI Q+ +V+ +GGD L++S +RL+ ++K LR I HV+I+R
Sbjct: 140 HHDCATPLERIDKCIEYIANTPQVRDVLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRI 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL+ L++ P+++ H NHP E +EE+ AA +RLA+AGI L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLRKY-HPIWLNTHFNHPNEITEESAAACARLADAGIPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+
Sbjct: 259 SVLLRGINDCTHVMKKLVHELVKIRVRPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ + + G + + +V Y
Sbjct: 319 TSGYAVPTFVVDAPGGGGKIPVMPTYLISQGPNRVVLRNFEGVVTTY 365
>gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 433
Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats.
Identities = 124/355 (34%), Positives = 210/355 (59%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+ + ++ S L N I + EI++ + +++TP A+LI+ N DPI
Sbjct: 30 WQISN-SIKSLDMLENVLEIKFPDNERKEIQKAIEVFPMSITPYYASLIDISNLKKDPIY 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q + K+EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+
Sbjct: 89 KQSVASKKELIMEDFEMEDPLAEDKDSPVIGITHRYPDRVLFYVNPNCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S+ + S ++ + A+ YI+E ++ +V+ +GGDPL+LS L +L + I+HV++
Sbjct: 149 V-SESESNPSKEEIQKAIDYIKEHPEVRDVLLSGGDPLLLSDDYLDWILSEISSIEHVEL 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SRVP+V PQRI L+ LK+ P+++ H NH E ++ ++ A+ +L+NAGI +
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNILKKY-HPIWVNTHFNHVVEITDTSVEALDKLSNAGIPI 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR +I +G +I+ SL
Sbjct: 267 GNQTVLLSGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSISKGLEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + + G+ + ++ ++ Y S+
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGVITTYKEPSN 381
>gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 351
Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats.
Identities = 284/344 (82%), Positives = 318/344 (92%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQFIPQKEE+
Sbjct: 8 LTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQFIPQKEEM 67
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGSQKGT+LS
Sbjct: 68 NILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGSQKGTILS 127
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+D +AAL+YIQ +IWEVIFTGGDPLILS RL+ VLK L IKHV+ILRFHSRVPIV
Sbjct: 128 PQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRFHSRVPIV 187
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
DPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQSVLLKGI
Sbjct: 188 DPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQSVLLKGI 247
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE ISG+CQP
Sbjct: 248 NDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKENISGICQP 307
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
FYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S
Sbjct: 308 FYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351
>gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C6]
Length = 433
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 209/350 (59%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
QL + ++ L + + + EI++ + +++TP A+LI+ N + DPI
Sbjct: 30 WQLSN-SIKDVDTLEKFLGINLDEGEKREIQKAIEVFPMSITPYYASLIDTENLDKDPIY 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+
Sbjct: 89 KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+NAGI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GK+ + + I G+ + ++ I+ Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376
>gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 437
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 123/355 (34%), Positives = 198/355 (55%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+R+ + + D I + ++ + +A+TP +LI+ + NDP+
Sbjct: 29 WQVRN-AVKTVDDFERVLGIEFPARKKRVYEQTLGKFPMAVTPYYLSLIDVDDYANDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+
Sbjct: 88 LQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRYPDRVLFHVSNTCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ S + E L YI+ Q+ +V+ +GGDPL+LS ++L +L +R I HV++
Sbjct: 148 VGD-VDSIPSRDNLERGLEYIRNTPQVRDVLLSGGDPLMLSDEKLDWLLTEIRAIDHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI EL+ L + P+++ H NHP E + + AI RLA+AGI L
Sbjct: 207 VRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHFNHPRELTASSRRAIQRLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND ++ L ++ RI+PYYL+ DL+ G +HFR I +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQCDLSEGLTHFRTPIGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+ SG P Y++D PGG GK+ + + + G + ++ ++ Y S
Sbjct: 326 RGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPNKVVLRNYEGVITTYHEPES 380
>gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228]
Length = 419
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ +T +++L + + +EI+E+ + + +TP A L++ + N P+ Q
Sbjct: 28 WQVKNR-VTDSEELAKLINLDDGEKEEIEEVLEKFRMGITPYYATLMDADDHNCPVRMQA 86
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E ++ + EDP+ ++ SP+ GI HRYPDR+L + C +YCR C RR G
Sbjct: 87 VPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 145
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + + + + L Y++ Q+ +V+ +GGD L++S +L+ ++K L I HV+++R
Sbjct: 146 QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDCLLISDDKLEYIIKELSEIDHVEVIRL 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI +L+ LK+ P+++ H NHP E ++EA A ++LANAGI L +Q
Sbjct: 206 GSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFNHPKEITKEAAEACAKLANAGIPLGNQ 264
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVL++GIND E++ +L++ V++R++PYY++ DL+ G HFR + +G +I+ SL+
Sbjct: 265 SVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQCDLSMGIEHFRTKVSKGLEIMESLRGH 324
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P Y++D PGG GK + + + + ++ ++ Y
Sbjct: 325 TSGYCVPTYVIDAPGGGGKTPVMPQYLISMSPTKVVLRNYEGVITTY 371
>gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa]
gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 208/350 (59%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H + + + + L ++ ++ + +++TP +LIN + NDP+
Sbjct: 12 WQLKHSIQDIDTVETLLGIRF-DPKKRKALEMTVKKFPLSITPYYLSLINTDDHENDPVF 70
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P EL I + DP+ ++ SP+ G+ HRYPDR+LL++ +VC +YCR C R+
Sbjct: 71 KQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRYPDRVLLQVSNVCSMYCRHCTRKRK 130
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + ++ +D + Y+++ +I +V+ +GGDPL+LS L +L +R I HVQ+
Sbjct: 131 VGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGDPLMLSDDYLDWILTEVRRIPHVQV 189
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P RI PEL++ LK+ +P+++ H NHP E + A A+ LA+AGI L
Sbjct: 190 IRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHFNHPREINASAKEALRLLADAGIPL 248
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND I+ +L+ VE R++PYYL+ DLA G SHFR + +G +I+ SL
Sbjct: 249 GNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQCDLAEGLSHFRTPVGKGIEIMESL 308
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ SG P Y++D PGG GK+ ++ + + + + ++ ++ Y
Sbjct: 309 RGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTNKVVLRNYEGVITTY 358
>gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 433
Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 128/355 (36%), Positives = 212/355 (59%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
QL + ++ L N ++ E+ EI++ + +++TP A+LI+ N + DPI
Sbjct: 30 WQLSN-SIKDVDTLENFLGITLENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIY 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+
Sbjct: 89 KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIRNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVEL 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + I G+ + ++ I+ Y S+
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTYVEPSN 381
>gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 437
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
+R+ K++ + L +++ ++ + + +A+TP +LI+P + NDP+
Sbjct: 29 WHVRNSIKSIEGVERLLGIEF-TEKERKALRNTTEKFPMAITPYYLSLIDPSDYRNDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P +EL I + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+
Sbjct: 88 MQAFPSTDELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + ++ S +D + YI+ Q+ +V+ +GGDP +LS L +L + I+HV++
Sbjct: 148 VGD-RDSIPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI EL++ LK+ P++I H NHP E + + A+++LANAGI L
Sbjct: 207 VRIGTRTPVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L V R++PYYL+ DL+ G +HFR I +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ SG P Y++D PGG GK+ + + I + ++ ++ Y
Sbjct: 326 RGHTSGFSIPTYVVDAPGGGGKIPLMPNYIISWTANKVVLRNYEGVITTY 375
>gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 436
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QL+H ++++S + L K++ E++ + +++TP +LI + NDPI
Sbjct: 29 WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q EL + EREDP+ ++ SP++G+ HRYPDR+L + ++C +YCR C R+
Sbjct: 88 LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + + YI+ + +V+ +GGDPL+L L +L LR I+HV+I
Sbjct: 148 VGD-VDSIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P R+ +L+ LK+ PV++ H NHP E + + A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L++ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ I + + + ++ ++ Y
Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPIMPNYLLSWSPNKVVLRNYEGVITTY 375
>gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
Length = 398
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T+ + L + E+ + ++A+TP NLI+ +PN PI +Q
Sbjct: 30 WQLKNR-ITTLEQLEQHMELTPEERAGCAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+++E+ + EE DP+G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+E ++ +V+ +GGDPL+LS K+L +L LR I+HV+ +R
Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP E ++ A RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLK +NDD E++ L+ V +R++PYY++ DL G++H R + +G +I+ L+
Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P +++D PGG GKV I+ I K+ + + + ++ YP K+
Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377
>gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 486
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 125/355 (35%), Positives = 205/355 (57%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QLRH K L + + L + + + + K I + +++TP +LI+ + NDP+
Sbjct: 80 WQLRHCIKDLDTFETLLDI-RLPETLRRQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P EL++ + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+
Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ S + + YI++ Q+ +V+ +GGDP +LS L +L L+ I+HV++
Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P V P RI EL++ LK+ P++I H NHP E + + AA+ +LA+AGI L
Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG C P Y++D P G GK+ + + + + ++ ++ Y S
Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 431
>gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
[Dehalococcoides sp. VS]
Length = 730
Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 133/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+ H K L + + L E+ +++ ++ +++TP +LI+P N NDP+
Sbjct: 41 WHVSHTIKDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 99
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 100 IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG T LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ+
Sbjct: 160 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 218
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V PQRI P L++ +K+ PV+I H NHP E + +I A+ LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPL 277
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
SG P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
Query: 351 SS 352
Sbjct: 398 CG 399
>gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 437
Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 192/350 (54%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QL H T+ E+ +E+KE + +A+TP +LI + NDPI
Sbjct: 29 WQLSH-TIRDLDTFEKITGITFTNEKYEELKETLEKFPLAITPYYLSLIETEDYENDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EL+I+ E+ DP+ ++ SP++GI HRYPDR+L + + C +YCR C R+
Sbjct: 88 MQSFPSVHELDIIEEDLADPLDEDRDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + + YI Q+ +V+ +GGDPL+L L+ +L L I HV+I
Sbjct: 148 VGD-VEYIPDKDQISKGIDYINNNPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEI 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI+ L++ L++ P++ NHP E + + A+ +LA+ GI L
Sbjct: 207 VRIGSRLPVVLPYRIDSNLVEMLRQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ LM V R++PYY++ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQSVLLSGVNDCPRIMKTLMHKLVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ SG P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPLMPNYLISWSTNKVVLRNYEGVICTY 375
>gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase
[Dehalococcoides ethenogenes 195]
gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Dehalococcoides ethenogenes 195]
Length = 708
Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+ H K L + + L E+ +++ ++ +++TP +LI+P N NDP+
Sbjct: 19 WHVSHTIKDLATVEKLLGVKF-SVEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 77
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 78 IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG T LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ+
Sbjct: 138 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 196
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V PQRI P L++ +K+ PV++ H NHP E + +I A+ LA+AGI L
Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWVNTHFNHPREITATSIRALRLLADAGIPL 255
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
SG P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375
Query: 351 SS 352
Sbjct: 376 CG 377
>gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 437
Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 195/350 (55%), Gaps = 6/350 (1%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+RH +++ + L + K++ E++E ++ + + +TP +LI+ + NDPI
Sbjct: 29 WHVRHAITEISTFERLLGVSF-GKDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EL + P++ EDP+ ++ P I HRYPDR+L + +VC +YCR C R+
Sbjct: 88 MQCFPSPAELQVEPDDMEDPLAEDADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ S + +L YI+E I +V+ +GGDP +L RL +L L I+HV++
Sbjct: 148 VGD-VDSIPSEAEVIESLDYIRENPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI EL L P+++ H NHP E + + A++RLA+AGI L
Sbjct: 207 VRIGTRTPVVLPYRITEELCAMLARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCSRIMKTLVHKLVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + ++ Y
Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPQYLISWSTNRVVLRNFEGVITTY 375
>gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
Length = 391
Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ LT +DL + ++ + N S+A+TP NLI+ NP DP+ Q
Sbjct: 30 WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E + EE D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E L YI+ S++ +V+ +GGDPL+LS ++L +L LR I HV+ +R
Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI PEL + K+ G P++++IH NHP+E +EE AA RL+ AG+ L +Q
Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+NDDP+ + L+ + +R++PYYL+ DL G SHF++ + G +I+ +L+
Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GKV ++ ++K+ + ++ + YP S+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378
>gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
Length = 447
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+RH + + S + L + E + + +++TP +LI+ + NDP+
Sbjct: 29 WHIRHTIRDIESFETLTGIRF-EPEDRAGYERTLEKFPLSITPYYLSLIDTADYANDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P EL+I P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+
Sbjct: 88 RQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + G + E LAYI+ ++ +V+ +GGDPL+L + L +L LR I+HV++
Sbjct: 148 VGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGDPLMLPDETLDWLLWNLRKIEHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P R+ +L+ +++ PV++ H NHP E + A A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHFNHPREVTRSAREALAKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG +P Y++D PGG GK+ + + + + ++ ++ Y
Sbjct: 326 VGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATNKVVLRNYEGVITTY 375
>gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273]
gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273]
Length = 438
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 123/355 (34%), Positives = 201/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
Q+RH +TL++ + L + EQ + + +++TP +LIN + NDP+
Sbjct: 28 WQMRHSVRTLSAFESLLGI-TLSDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+
Sbjct: 87 LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + T+ + YI+ Q+ +V+ +GGDP +LS L +L L+ I+HV++
Sbjct: 147 VGD-RDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI P L+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + ++ ++ Y S
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379
>gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
Length = 448
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 127/348 (36%), Positives = 211/348 (60%), Gaps = 5/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ H+ +T+ + L + +E+ I++ + + + +TP A LI+P +P+ P+ Q
Sbjct: 29 WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EL E DP+ ++ SP+ GI HRYPDR+L + H C +YCR C RR +VG
Sbjct: 88 VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + + A+AYI+ +I +V+ +GGDPL + +RL+ V+K LR I HV+I+R
Sbjct: 148 QEAMSTAM--LDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239
+R+P+V PQRI PEL+ L++ P+++ H NHP+E +A A+ RLA+AGI +
Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKG+ND ++ L+ V++R +PYY+++ DL+ G SHFR ++ +G I+ +L+
Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG C P +++D PGG GK+ + + +G + + + Y
Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPVMPQYLISQSDGRVILRNFEGKISIY 372
>gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
Length = 433
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 209/350 (59%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
QL + ++ L + K + EI++ + +++TP A+LI+ N + DPI
Sbjct: 30 WQLSN-SIKDVDTLEKFLGINLDKHEKKEIQKAIEVFPMSITPYYASLIDTKNLDKDPIY 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+
Sbjct: 89 KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SRVP+V PQRI L+ LK+ P++I H NHP E ++ + A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GK+ + + + G+ + ++ I+ Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376
>gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift
[Dehalococcoides sp. CBDB1]
Length = 708
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+ H + LT+ + L E+ +++ + +++TP +LI+ N NDP+
Sbjct: 19 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 77
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 78 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+
Sbjct: 138 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 196
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L
Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 255
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
SG P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375
Query: 351 SS 352
Sbjct: 376 CG 377
>gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium
papyrosolvens DSM 2782]
Length = 425
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 198/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T+ L + E+I I++ +A+TP L+NP +P PI +Q
Sbjct: 24 WQLANR-ITTITQLEQVVNLTVEEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E I + DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G
Sbjct: 83 VPTINETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
LS + A+ YI+ QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R
Sbjct: 142 NDDKELSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+V PQRI PEL LK+ P++I NHP E + EAI A L++AGI L +Q
Sbjct: 202 GTRVPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL IND P I+ NL++ V+ R++PYYL+ DL+ G HFR + G +I+ L+
Sbjct: 261 SVLLSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK+ ++ + N + + ++ Y
Sbjct: 321 TSGFAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367
>gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 440
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
QLRH + + + + L E+ E++E + + +++TP +LI+ N DP+
Sbjct: 29 WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ P +EL + E EDP+ ++ SP+ GI HRYPDR+L ++ ++C +YCR C R+
Sbjct: 88 RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + L YI+ + +V+ +GGDPL+L L +L+ LR I HVQ+
Sbjct: 148 VGD-VDSIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI P LI+ L P+++ H NHP E + A A+SRLANAGI L
Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P I+ LM+ VE R++PYYL+ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375
>gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2]
gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2]
Length = 433
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 212/350 (60%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QL + ++ L N I +++ EI++ + + +++TP A+LI+ N DPI
Sbjct: 30 WQLSN-SIKDVDTLENFLGITFDEKEKTEIQKAIDVFPMSITPYYASLIDIKNLGKDPIY 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+
Sbjct: 89 KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S+K + S ++ + A+ YI+ ++I +V+ +GGDPL+LS + L +L + IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GK+ + + + G+ + ++ I+ Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376
>gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 730
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
+ H + LT+ + L E+ +++ + +++TP +LI+ N NDP+
Sbjct: 41 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVF 99
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+
Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 277
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
SG P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
Query: 351 SS 352
Sbjct: 398 CG 399
>gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase
[Dehalococcoides sp. BAV1]
Length = 730
Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
+ H + LT+ + L E+ +++ + +++TP +LI+ N NDP+
Sbjct: 41 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 99
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+
Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+
Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPL 277
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
SG P Y++D P G GK+ I + + + + ++ I+ Y PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397
Query: 351 SS 352
Sbjct: 398 CG 399
>gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter
fumaroxidans MPOB]
gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 460
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 199/352 (56%), Gaps = 2/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLR++ + + L + +++ + +A+TP A+L++ ++P+ P+ R
Sbjct: 92 WQLRNR-IQDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVRRCV 150
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P E EDP+G+ S L +VHRYPDR+L + C YCR+C R MVG+
Sbjct: 151 VPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRMVGN 210
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ ++ + A+ YI+ I +V+ +GGDPL L + L+ +L LR I HV+ LR
Sbjct: 211 RGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEFLRI 270
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++VP+V PQR+ L++ LK+ P++++IH HP E + E A +RLA+AGI L SQ
Sbjct: 271 GTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPLGSQ 329
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL G+ND+ E + L +++R+KPYYL+ D G+SHFR + +G +I+ L+
Sbjct: 330 TVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGLRGF 389
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GKV + + + ++ ++ YP +
Sbjct: 390 TSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYPDPAG 441
>gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
DSM 2075]
Length = 430
Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 205/351 (58%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ LT+ Q L + +E+ + ++ +A+TP +LI+ NP DP+ R
Sbjct: 75 WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P E DP+ ++ G+VHRYPDR+LL C YCR+C R +VG
Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G + E ALAYI+ + +V+ +GGDPL ++ RL+ +L LR ++HV+I+R
Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
S+VP V PQR+ P L + LK+ P++I++H HP E + EA A +RLA+AG+ L SQ
Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GINDD + LM+ + LR++PYYL+ D G++HFR + +G +IVA L+
Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GKV + ++ + + + ++ + YP +
Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYPDNA 422
>gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
Length = 422
Score = 476 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 199/351 (56%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ +T+ + L + + EI+E +A+TP A+LI+P +P DP+ RQ
Sbjct: 23 WQVANR-ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E ++ + DP+ ++ SP+ G+ HRYPDR +L L C +YCR C RR G
Sbjct: 82 VPSILETHVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S AAL YI+ +V+FTGGDP ++ L VL + I HV+I+RF
Sbjct: 141 ETDHAYSRDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRF 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI +L LK PV++ H NHP E + ++ AA ++LANAGI L +Q
Sbjct: 201 GTRTPVVMPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+ND P + L + + LR++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 260 SVLLKGVNDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG+ P +I+D PGG GK+ + + + + + + ++ + Y +
Sbjct: 320 TSGMAVPTFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTYAEPA 370
>gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
akajimensis DSM 45221]
Length = 397
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 130/352 (36%), Positives = 210/352 (59%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T + L + ++ + ++A+TP NLINP +PNDPI RQ
Sbjct: 30 WQLKNR-ITRLEQLEQYLDLSPDERAGCLFANKKLALAITPYFFNLINPKDPNDPIRRQV 88
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ E I P+E DP+G+ P+ GIVHRYPDR+L + C YCR+C R +V +
Sbjct: 89 IPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E+ L YI++ S+I +V+ +GGDPL+LS K+L +L LR I HV+ +R
Sbjct: 149 AQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPLLLSDKKLDYLLGELRKIPHVEFIRI 207
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ PQRI P+L ++ G P++++IH NHP E S E AA RL+ AG+ + +Q
Sbjct: 208 GSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNHPSECSLELKAACERLSYAGVPIGNQ 266
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKG+N+D ++ +L+ + +R++PYYL+ DL G++H R EG +I+ L+
Sbjct: 267 SVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCDLITGSAHLRTDPREGIEIIRQLRGH 326
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P +++D PGG GK+ ++ ++ + + + + ++YP K
Sbjct: 327 TSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTLILRNFQGERYEYPLKCG 378
>gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8]
Length = 437
Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats.
Identities = 118/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
QL H + + + +D+ +E+ +++ + +++TP +LI+ + NDPI
Sbjct: 29 WQLSHAIRDIDTFEDI-TCIKFDEEEKQVYEKVLEKFPLSITPYYLSLIDYDDYKNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P EL I + +D + ++ SP+ GI HRYPDR+L + ++C +YCR C R+
Sbjct: 88 IQAFPDPRELVISKYDIKDSLAEDKDSPVPGITHRYPDRVLFLISNICSMYCRHCTRKRR 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + + + YI+ +I +V+ +GGDPL+LS L +L L+ I HV++
Sbjct: 148 VGD-VDSIPNRSEILKGIEYIKNTPEIRDVLLSGGDPLMLSDSYLDWILTELQTIPHVEV 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +RVP V P RI +L+ LK+ P++I NHP E + + A+ LA+AGI L
Sbjct: 207 IRIGTRVPAVLPYRITDDLVNMLKKH-HPLWINTQFNHPREVTTSSREALRMLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L++ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPILMKRLVQRLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK++I + + + ++ ++ Y S
Sbjct: 326 IGHTSGFAVPSYVIDAPGGGGKIRIMPNYLISWSTNKVILRNYEGVITSYKEPDS 380
>gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136]
Length = 406
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 133/352 (37%), Positives = 211/352 (59%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S L ++ +E+ + N ++A+TP NLI+P +P+ PI RQ
Sbjct: 34 WQLKNR-VNSLAKLEEHLVLSEEERAGVLLSGNKLAMAITPHFFNLIHPTDPDCPIRRQV 92
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ EE P+E DP G+++H P+ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 93 IPRIEETWDDPDEMSDPCGEDSHMPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRVVSG 152
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L + + EA Y++ +++ +V+ +GGD L+ S +L+ +LK LR I H++ LR
Sbjct: 153 VGDQELHT-EFEAVFKYLEAHTEVRDVLLSGGDALLFSDAKLEGILKRLRAIPHIEFLRI 211
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVPI PQRI PEL L + P+++++H NHP E + E A+ RLAN GI L +Q
Sbjct: 212 GSRVPIFLPQRITPELCTMLAKY-HPLWMSVHTNHPREITIEVKEALERLANHGIPLGNQ 270
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+NDDPE++ L+ + R++PYYL+ DL G+SH R ++ +G +I+ SL+
Sbjct: 271 SVLLRGVNDDPEVMKALVHKLLMSRVRPYYLYQCDLIQGSSHLRTSVSKGLEIIESLRGH 330
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GKV ++ + + I ++ V DYP +
Sbjct: 331 TTGYGVPQFVIDAPGGGGKVPVNPEYVLAKDSHHTLIRNYEGKVFDYPEPET 382
>gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 422
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 202/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + + L I +E+ + E +++TP A L++P+N PI RQ
Sbjct: 23 WQVANR-VKTVDALRQIIDITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G
Sbjct: 82 VPTDKELKIDKWDMIDPLHEDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q + K+ + A+ YI+E ++ +V+ +GGD L++ L+ +L LR I HV+I+R
Sbjct: 141 QLDRARTRKEIDDAIEYIRETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQR+ PEL++ +++ PV+I H NHP E + ++ A LA+ GI L +Q
Sbjct: 201 GTRTPVVLPQRVTPELVKMIRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGN 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGLC P +++D PGG GK+++ + + ++ ++ Y
Sbjct: 320 TSGLCVPTFVVDAPGGGGKIRVMPQYNISESDRVVVLRNYEGVITTY 366
>gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 350
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 199/345 (57%), Positives = 259/345 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + AA YI+ +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPPA 349
>gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 454
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 120/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
+R+ +T+ +A+ + E+ K + + +++TP +LI+ + DP+
Sbjct: 29 WHVRNSIRTVEAAEKILGV-TFSDEKRALYKRTLDKFPMSITPYYFSLIDQEDYESDPVF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P ELN+ P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+
Sbjct: 88 MQAFPDIRELNVSPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG + +V + + YI+ I +V+ +GGDPL+LS +RL +L +R I HV+I
Sbjct: 148 VGD-RDSVPDRGQLKQGIEYIRRTPAIRDVLLSGGDPLMLSDERLDWLLGEIRSIPHVEI 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR+P+V P RI L+ LK+ P+++ H NHP E + + A++R+A+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDGLLAVLKKH-HPLWLNTHFNHPRELTRTSRRALARMADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL +ND P + L + V+ R++PYY++ DL+ G SHFR + +G +I+ SL
Sbjct: 266 GNQSVLLADVNDCPRLFRTLNQKLVQNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG+ P Y++D PGG GK+ + + G + ++ ++ Y S
Sbjct: 326 VGHTSGMAVPTYVIDAPGGGGKIPMMPNYAISQGVNKVVLRNYEGVITTYTEPDS 380
>gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 406
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 204/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ +T+ L + ++ D I + +A+TP A+LI + PI Q
Sbjct: 23 WQISNR-ITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR + G
Sbjct: 82 VPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q L + A +YI+ I +V+ +GGDP L+ ++L+ +LK LR IKHV+++RF
Sbjct: 141 QNDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRF 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI PEL L++ PV+I H NHP E + + AA++RLA AGI + +Q
Sbjct: 201 GTRTPVVLPQRITPELCNMLEKY-HPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND I+ L++ +++RI+PYYL+ DL+ G HFR ++ G +I+ +L+
Sbjct: 260 SVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P Y++D PGG GK+ I + + G G + + V+ Y
Sbjct: 320 TSGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLY 366
>gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 425
Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 206/351 (58%), Gaps = 2/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + + + L + E+ D IK ++ +++TP A+L++ NP P+ R
Sbjct: 67 WQLKNR-IQNYETLSTILTLSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAV 125
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL E EDP+G++ SP+ GIVHRYPDR+L + C YCR+C R MVG
Sbjct: 126 VPVRAELCRSFGEAEDPLGEDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGR 185
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + E AL YI+ + I +V+ +GGDPL L+ L+ +L L I+H++I+R
Sbjct: 186 SSACHGGTSNWEKALNYIEANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRI 245
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++VP+V PQRI L + LK P++I IH HP E + E A +RLA+AGI L SQ
Sbjct: 246 GTKVPVVLPQRITSRLARMLKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQ 304
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGINDD + + L +++R++PYYL+ D G+ HFR ++++G +I+ L+
Sbjct: 305 TVLLKGINDDVDTMKELYHRLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGH 364
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SGL P +++D PGG GK+ + + + ++ +++ YP S
Sbjct: 365 TSGLAVPNFVIDAPGGGGKIPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415
>gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
Length = 473
Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 194/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ
Sbjct: 37 WQLKNR-INSVEELEEVLRLTDSERQG-ASADGIFRLDITPYFASLMDPEDPTCPVRRQV 94
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 95 IPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 154
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T + + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I H++I+R
Sbjct: 155 PTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLGGLLAELRKIPHIEIIRI 213
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +Q
Sbjct: 214 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 272
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND P I+ LMR V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 273 AVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 332
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + G G + + + Y
Sbjct: 333 TSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGKVILRNFEGYIAAY 379
>gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
Length = 412
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 129/352 (36%), Positives = 205/352 (58%), Gaps = 4/352 (1%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
QL+++ +TS + L + E+ ++ ++A+TP NLI+P + N PI Q
Sbjct: 46 WQLKNR-ITSLEQLQKLMPTLTPEEHAGTVLANSKLALAITPYFFNLIDPADENCPIRTQ 104
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP+ +E + E +DP G+++HSP+ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 105 VIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVS 164
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ G + E + YI++ + +V+ +GGDPL+LS +L+ +L LR I HV+ LR
Sbjct: 165 NAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPLLLSDDKLEYLLSQLRAIPHVEFLR 223
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+PI PQRI P L LK+ P++I+IH NHP E + E A+ RLA AGI L +
Sbjct: 224 IGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNHPRELTTEVREALGRLAEAGIPLGN 282
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+ +NDD + L++ + R+KPYYL+ DL AG++H R ++ +G +I+ L+
Sbjct: 283 QSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCDLIAGSAHLRSSVRKGLEIMEGLRG 342
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GKV ++ + I + + +YP +
Sbjct: 343 HTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRVVIRNFEGKIFEYPEAA 394
>gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 350
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 201/345 (58%), Positives = 260/345 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VYIA+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPPA 349
>gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 442
Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 199/347 (57%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T L + E+ + + +A+TP A L++P++ N PI Q
Sbjct: 23 WQLVNR-ITDIDTLSRVIALTPEEKKALNDDLLELRMAITPYYATLMDPNDINCPIRMQA 81
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G
Sbjct: 82 VPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG- 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S ++ +AA+ YI+ + +++ TGGDPL + + L+ +L +LR I HV+I+R
Sbjct: 141 EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLTMEDENLEWLLTSLRRIPHVEIIRI 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP V PQRI L+ LK+ P++I +H NHP E + + A++ LANAGI L +Q
Sbjct: 201 GTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNMLANAGIPLGNQ 259
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P I L + R++PYY++ DL+ G SHFR ++ +G +I+ L+
Sbjct: 260 SVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDLSRGISHFRTSVGKGIEIIEFLRGH 319
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G+ P +++D PGG GK+ + + + G + + + Y
Sbjct: 320 TTGMAVPTFVIDAPGGGGKIPVMPNYVLAQGERRIVLRNFEGTITVY 366
>gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1]
gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 492
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 199/347 (57%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S ++L + + + + + +TP A+L++P +P P+ RQ
Sbjct: 49 WQLKNR-INSVEELQEVLTLTESEYRG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 106
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EEL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 107 IPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 166
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R
Sbjct: 167 PTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLSELRKIEHIEIIRI 225
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ EL L E P+++ IH NHP E + E A RL AG+ L +Q
Sbjct: 226 GTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 284
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 285 SVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 344
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + + Y
Sbjct: 345 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 391
>gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 437
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 119/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
QL+H + + + L K E+ D++K+ + +++TP +LI+ + NDPI
Sbjct: 29 WQLKHSIGDVDTFETLLGIKF-KAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIF 87
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
Q P +EL+I ++ EDP+ ++ SP++GI HRYPDR+L + + C +YCR C R+
Sbjct: 88 LQAFPSPKELDIDEDDLEDPLSEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRK 147
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ + L YI+ + +V+ +GGDP +L L +L LR I HV+I
Sbjct: 148 VGD-VDSIPTRDAVSEGLEYIRNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEI 206
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R+P+V P R+ +L++ LK+ P++I H NHP E + + A+ +LA+AGI L
Sbjct: 207 IRIGTRMPVVLPYRVTDDLVEILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPL 265
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL G+ND I+ +L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ L
Sbjct: 266 GNQTVLLSGVNDCHRIMKSLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHL 325
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D P G GK+ + + + ++ ++ Y S
Sbjct: 326 IGHTSGFAVPTYVIDAPHGGGKIPVMPSYLISWSTNRVILRNYEGVITSYKEPDS 380
>gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 443
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 126/355 (35%), Positives = 200/355 (56%), Gaps = 6/355 (1%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
LRH K++ + + L N E+ E++E + +A+TP +LI+ N DP+
Sbjct: 33 WHLRHTIKSIDTVERLLN-TTFSPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ +P EL I E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+
Sbjct: 92 RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG +V K A L YI++ I +V+ +GGDP +L + +L LR I+HV++
Sbjct: 152 VGD-VDSVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V PQRI P L++ LK+ P+++ H NHP E + + A++ LA+AGI L
Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLL G+ND P ++ L+ V R++PYYL+ DL+ G + FR + +G +I+ SL
Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + + + + + ++ Y S
Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNFEGVITTYKEPDS 384
>gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 409
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 128/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TSA+ L + + +++ +I+++ Y A++P +LI+P++PN PI RQ
Sbjct: 63 WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKRQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR +G
Sbjct: 122 VPSSLELVEKGD--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRFIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI +L+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + V +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEVFE 403
>gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 415
Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R + + + L + E+ + + + + +TP A L++P +P PI Q
Sbjct: 69 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412
>gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 415
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R + + + L + E+ + + + + +TP A L++P +P PI Q
Sbjct: 69 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRL 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412
>gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
Length = 397
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 135/349 (38%), Positives = 204/349 (58%), Gaps = 4/349 (1%)
Query: 1 MQLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
QL+++ L S + + LI E+ + + +LTP NLI+P NP+ P+ RQ
Sbjct: 29 WQLKNR-LNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQ 87
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP+ EEL +P E DP G++ G+VHRYPDR+L + C YCR+C R +V
Sbjct: 88 VIPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVS 147
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
L D + Y+++ ++I +V+ +GGDPL+LS RL+K+L+ LR I H++I+R
Sbjct: 148 GVGSQKLEIDD-KLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEIIR 206
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+RVPI PQRI L + LK P++I IH+NHP E + EA A+ +LA+ GI L +
Sbjct: 207 IGTRVPIFLPQRITESLCKVLKAY-HPLWINIHSNHPKELTLEAKTALEKLADTGIPLGN 265
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGINDDP+ + L+ V R++PYYL+ DL GT HFR+ I G +I+ L+
Sbjct: 266 QSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKLRG 325
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P Y++D PGG GK+ ++ + + ++ ++ YP
Sbjct: 326 FTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374
>gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
Length = 363
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 200/353 (56%), Positives = 268/353 (75%), Gaps = 1/353 (0%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+ R +T+ + + L A LI+ E ++ ++ ++ Y++A+TP + L++ H+P DPIARQ
Sbjct: 8 WTMTRFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
F+P EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG
Sbjct: 68 FVPDLAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVG 127
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
Q ++S ++ +AA AYI+E IWEVI TGGDPL+LS +RL ++K LR I HV+I+R
Sbjct: 128 PQGNGMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVR 187
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
FH+RVP+VDP RI+ LI+ LK +GK Y+A+HANH E + A A +RL +AGI ++S
Sbjct: 188 FHTRVPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVS 247
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+
Sbjct: 248 QTVLLKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRG 307
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+SGLCQP Y+LD+PGG+GK I + +K +G Y ++D + H YPP +S
Sbjct: 308 HVSGLCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360
>gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 407
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 210/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ L SA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q
Sbjct: 63 WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKYP-PIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ +L+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + G G + + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403
>gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 407
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 128/346 (36%), Positives = 209/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +S + L + +++ ++I+E++ Y A++P +LI+P NPN PI +Q
Sbjct: 63 WQLKNRVASS-KILKELLNLDEKEAEQIEEVAKSYRFAISPYYLSLIDPDNPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403
>gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
Length = 350
Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 200/346 (57%), Positives = 263/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + DL A LI + ++ ++ Y+IALTP +A LI+ +P DPIARQF+P
Sbjct: 5 RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L +AA AYI++ +IWEVI TGGDPL+LS +RL+++L+ L I+HV+I+RFH+RVP
Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK
Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++++G G Y ++D+ H YPP+
Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350
>gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
Length = 349
Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 201/345 (58%), Positives = 257/345 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++ ++ Y+I LTP I LI+ +PNDPIARQF+P
Sbjct: 5 KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + EAA YI +IWEVI TGGDPL+LS +RL++++K L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGG+GK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPPA 349
>gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 350
Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 199/345 (57%), Positives = 259/345 (75%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L SA DL A L+ ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 65 ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +++ L+ LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC
Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
QP YILD+PGGYGK + ++ G+G Y ++D+ H YPP
Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPA 349
>gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652]
gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652]
Length = 350
Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 197/346 (56%), Positives = 259/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + + DL A L + ++E++ Y+IALTPV+A LI+ +P+DPIARQF+P
Sbjct: 5 KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + ER DPIGD HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI + +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350
>gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300]
gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300]
Length = 483
Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ
Sbjct: 41 WQLKNR-INSVEELEEVIRLTPSERAG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 99 IPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I+H++I+R
Sbjct: 159 PTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLAGLLSELRKIEHIEIIRI 217
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P RI EL L E P+++ IH NHP E + E A RL AG+ L +Q
Sbjct: 218 GTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 276
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 277 SVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 336
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + + Y
Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383
>gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 375
Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R + + + L + E+ + + + + +TP A L++P +P PI Q
Sbjct: 29 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 87
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 88 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 147
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + E +LAYI + +I +V+ +GGDPL LS RL +L LR I HV+I R
Sbjct: 148 PT-SAAAKRQIEESLAYIAQHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 206
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 207 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 265
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+
Sbjct: 266 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 325
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D P G GK+ ++ + + + + +Y
Sbjct: 326 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGERFEY 372
>gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
owensensis OL]
gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
owensensis OL]
Length = 407
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 131/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q
Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQ+I EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G G + V +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403
>gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
Length = 437
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 193/350 (55%), Gaps = 6/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
Q+++ T+ + + I Q +I+ + +A++P +L++ HN NDPI
Sbjct: 30 WQVKN-TIRKVETVEMILGITFSDSQKFDIERTLAQFPMAISPYYLSLVDIHNYDNDPIF 88
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q P ELNI P + DP+ + SP I HRYPDR+L + +VC +YCR C R+
Sbjct: 89 KQCFPSVLELNISPCDMSDPLHEEVDSPAPCITHRYPDRVLFHVSNVCGMYCRHCTRKRK 148
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
VG ++ S + + YI+ I +V+ +GGDP +LS + +LK + I HV++
Sbjct: 149 VGDL-DSIPSKESLLQGIEYIKNTPVIRDVLLSGGDPFLLSDTMIDWLLKEITAIDHVEV 207
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R +R P+V P RI EL+ LK+ +++ H NH E + EA AA+ +L AGI L
Sbjct: 208 VRIGTRTPVVLPFRITDELVSILKKYD-NIWLNTHFNHSREMTTEAGAALKKLKLAGIPL 266
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+QSVLLKGIND I+ +L+ + ++PYYL+ DL+ G HFR I G +I+ +L
Sbjct: 267 GNQSVLLKGINDCTYIMKDLLHKLILNGVRPYYLYQCDLSEGLEHFRTNIGTGIEIMENL 326
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ SG P Y++D PGG GK+ + + + + + ++ ++ Y
Sbjct: 327 RGHTSGFAIPTYVIDAPGGGGKIPVMPNYLVSWSSNKVVLRNYEGVITTY 376
>gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
Length = 493
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 195/347 (56%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S +L + + + + +TP A+L++P +P P+ RQ
Sbjct: 41 WQLKNR-INSVAELEEVIRLTDSERQG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 99 IPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R
Sbjct: 159 PSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLAELRKIEHIEIVRI 217
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +Q
Sbjct: 218 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPREITPEVAEACDRLTRAGVPLGNQ 276
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+
Sbjct: 277 SVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 336
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + + Y
Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383
>gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 454
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 199/350 (56%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + + L + E++ E+ + +TP +L++ P P+ R
Sbjct: 90 WQLQNR-ICTPTALSRFLDLSLEEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTV 148
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E LP E DP+G+ H+ + G+VHRYPDR+LL + C YCR+C R +VG
Sbjct: 149 VPTVHEFFKLPGEENDPLGEEGHTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVGR 208
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
K S E A+ YI+ I +V+ +GGDPL LS +L +L +R I HV+I+R
Sbjct: 209 GK-IYPSRSRLEKAIDYIRNTPTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRI 267
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++VP V PQR+ PEL++ L++ P+++++H HP E + EA A + LA+AGI L SQ
Sbjct: 268 GTKVPAVLPQRVTPELVRVLRKY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQ 326
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGINDD + LM + +R+KPYYL+ D AG+ HFR ++ G +I+ L+
Sbjct: 327 TVLLKGINDDVATMKALMHQMMRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGH 386
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + + + + ++ N + YP
Sbjct: 387 TSGYAVPTYVIDAPGGGGKIPLLPNYVVSSSDAGVVLENYENRLFTYPNP 436
>gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 407
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 209/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ L SA+ L + +++ +I+E++ Y A++P LI+P +PN PI +Q
Sbjct: 63 WQLKNRVL-SAKTLKELLNLNEKETQQIEEVAKVYRFAISPYYLLLIDPDDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + G G + + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403
>gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 436
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 204/351 (58%), Gaps = 3/351 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R++ + + Q ++ ++ + + + + +TP +L++ + N P+ R
Sbjct: 88 WQSRNR-IRTLQQFEKMLVLSSDERQALVDGGSMLPVGITPYYMSLLDREDANQPLRRTV 146
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P E +DP+G++ HSP G+VHRYPDR+LL L C YCR+C R +VG
Sbjct: 147 VPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 205
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S + E A YI++ I +V+ +GGDPL LS +L +L LR I H++ +R
Sbjct: 206 HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPLALSEDKLDWILGRLRSIPHLEFVRI 265
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+++P V PQRI P+LI+ K+ P++++IH HP E + EA A +RLA+AGI L SQ
Sbjct: 266 GTKMPAVLPQRITPQLIRVFKKYS-PLWMSIHFLHPDECTPEANQACARLADAGIPLGSQ 324
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND + + +L+ + +R++PYY++ D +G++HFR ++ +G +I+ L+
Sbjct: 325 TVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCDPISGSAHFRTSVSKGLEIIEGLRGH 384
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
+G P Y++D PGG GK+ + + + + ++ V+ YP +
Sbjct: 385 TTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDLLLRNYEGQVYRYPDPT 435
>gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 407
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q
Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+Y+ H NHP E ++E+ A LA+ GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G G + V +
Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403
>gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
Length = 439
Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats.
Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 3/344 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ +TS ++ + E+ ++ +S + ++ TP +LI+ N NDP+ Q
Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQL 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL DP+G+ + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 118 MPDTAELCFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI+ EL L + G +++ H NHP E +EE+ A RL AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-TIWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND I +L + +++PYYL D GT HF TIE G I+ L+
Sbjct: 296 SVLLKGINDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGY 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLPGG GK+ + + Y I ++ +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITVQPDYVLDKQADEYIIRNYKGDI 399
>gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT
894]
Length = 350
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 194/346 (56%), Positives = 257/346 (74%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + S DL A L ++E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA YI+ +IWEVI TGGDPL+LS +RL+++++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP +I+ I LK +GK VY+A+HANH E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGGYGK + ++ G G Y ++D+ H YPP +
Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350
>gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 413
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R + +T L + ++ + E + + +TP A L++P +P+ PI Q
Sbjct: 67 WQQRER-VTRLDQLEKVIHLTADERRAVIESDAEFHMGITPYYAALMDPDDPSCPIRLQS 125
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL I P + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V
Sbjct: 126 VPTMGELTIAPADLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 185
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + E +LAYI +I +V+ +GGDPL LS +RL +L LR I HV+I R
Sbjct: 186 PT-SAAAKRQIEESLAYISAHPEIRDVVISGGDPLSLSDERLDYILGRLRAIPHVEIFRL 244
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q
Sbjct: 245 GTRNLVTLPQRVTDDFVHMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 303
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+ND+PE++ L + +RI+PYY++ DLA G SHFR +E G +I+ L+
Sbjct: 304 MVLLKGVNDEPELVKELNHKLLLMRIRPYYIYQCDLAKGISHFRTPVETGIRIIEHLRGH 363
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P +++D P G GK+ ++ + + + + ++ ++Y
Sbjct: 364 TSGLAVPHFVVDAPQGGGKIPVNPNYVVSHEGKRWVLRNYAGKEYEY 410
>gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 407
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + SA+ L + + +++ +I+++ Y A++P +LI+P++PN PI +Q
Sbjct: 63 WQLKNR-IASAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++++ A L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + G + + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403
>gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009]
gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris
CGA009]
Length = 363
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 179/349 (51%), Positives = 244/349 (69%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + + Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362
>gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
NGR234]
Length = 350
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 210/347 (60%), Positives = 266/347 (76%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
H+ L +A DL A LI + I +++ Y+IA++PV+ANLI+ +P DPI+RQF+P
Sbjct: 4 HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL + PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 64 AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AA+AYI E +IWEVI TGGDPL+LS +RLQ++L+ L I HV+++RFH+RV
Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V+P RI+ +LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL
Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL
Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
CQP YILD+PGG+GK I I+ G G Y +TD H H YPPKS
Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350
>gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
DSM 4252]
Length = 396
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 5/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+RH+ + +A++L + E+ I+ + +TP A+L++P +PN PI RQ
Sbjct: 18 WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EEL DP+ + HSP+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 77 VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ + +AA+ YI +I +V+ TGGDPL LS L +L LR I HV+I+R
Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+ P RI PEL + L+ P++I H NHP E + +A AI RL AGI + +Q
Sbjct: 196 GTRMPVKLPYRITPELCRLLERY-HPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GINDD + L V +R++PYYL+ L GT+HFR IE+G I+ +L+ +
Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y+LD P YGKV +D ++ + ++ P
Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRAGDYVIVETPRGVLWAEPNP 362
>gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56]
Length = 350
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 197/346 (56%), Positives = 256/346 (73%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L S DL A L + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350
>gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2]
gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2]
Length = 435
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 128/352 (36%), Positives = 212/352 (60%), Gaps = 5/352 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + + + L + +++ + + +++TP +LI+P++P+ P+ +
Sbjct: 85 WQIANR-VRTHERLGRMISLSEDEF--MVNSESQLPLSITPYYLSLISPNDPDQPLRKSV 141
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + E +DP+G+++ SP+ G+VHRYPDR+L LL C YCR+C R +VG
Sbjct: 142 VPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDRVLFLLLDFCSTYCRYCTRSRVVG- 200
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G + E A+ YI + I +V+ +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 201 HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLTLSDDRLEWVLSRLRKIPHVEIIRI 260
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++V V PQRI P+L++ LK P+++++H HP E + EA A + LA+AGI L SQ
Sbjct: 261 GTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHPDECTPEAYKACTMLADAGIPLGSQ 319
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND+ E +A+LM +++R++PYYL+ D G+ HFR +I++G +I+ L+
Sbjct: 320 TVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDPITGSGHFRTSIDKGLEIIHGLRGF 379
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SG P Y++D PGG GK+ + +K+ + +T++ + YP S
Sbjct: 380 TSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLVLTNYEDKTFCYPDPVS 431
>gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 421
Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 203/348 (58%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ +T+ DL + + + +K + ++TP +LI+P++P + R
Sbjct: 70 WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EE + E DP+ + + + ++G+VHRYPDR+L C YCR+C R MVG
Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ K E A+ YI+E +++ +V+ +GGDPL LS + + +L + I HV+++R
Sbjct: 189 HTEAL--QKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++VP+V PQRIN L+ L++ KP+Y++IHA HP E ++E++ A + LA++G++L SQ
Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND +L +L + R+KPYYL D +G+ HFR T+++G+ ++ L+
Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG P Y++D PGG GKV I + + ++ V YP
Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPILPQYEVGQDDEHLYLRNYEGKVFTYP 413
>gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
Length = 354
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 196/349 (56%), Positives = 264/349 (75%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R +T+ + + L A LIK E +++++ ++ Y++A+T +A+L++ +P DPIARQF+P
Sbjct: 3 RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q
Sbjct: 63 LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++S ++ +AA YI+ IWEVI TGGDPL+LS +RL ++ L+ + HV+I+RFH+R
Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+VDP+RI+ LI+ LK +GK Y+A+HANH E + A +A +RL +AGI ++SQ+VL
Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKGINDD ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG
Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
LCQP Y+LD+PGG+GK I + +K +G Y I+D + H YPP +S
Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351
>gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
Length = 419
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ ++ + L + +E+I+ IK +S Y A++P A+L++P NP PI +
Sbjct: 70 WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EL DP+ + SP I RYPDR+++ + + C ++CR C RR +G
Sbjct: 129 IPSIKELTDK-YGVPDPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRNIG- 186
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D EAAL YI+ +I +V+ TGGDPL L +++ +L L I HV+I R
Sbjct: 187 EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEIKRI 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ P+ PQRI EL + L + P+YI NHP E +EEA A +LA AG+ L +Q
Sbjct: 247 GTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVALGNQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIN+DP ++ L + + +KPYY+ H GT+HF T+++G +I+ L+
Sbjct: 306 AVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQLRGY 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P+YI++ P G+GK I + VG I + V +YP
Sbjct: 366 TSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413
>gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5]
Length = 350
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 195/346 (56%), Positives = 256/346 (73%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K L + DL A L+ + E++ Y+IALTP + LI+ +P+DPIARQF+P
Sbjct: 5 KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q
Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK I ++ G+G Y ++D+ H YP
Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYPTAG 350
>gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 457
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 116/352 (32%), Positives = 199/352 (56%), Gaps = 3/352 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ + S + + + + +++ + +TP +L++P +P P+ +
Sbjct: 108 WQAQNR-VRSLEQFERMLELAPFEREALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTV 166
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P E +DP+G++ HSP+ G+VHRYPDR+LL L C YCR+C R +VG
Sbjct: 167 LPSTAEFVRTPGEADDPLGEDGHSPVPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 225
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S E Y+Q Q+ +V+ +GGDPL L ++L +L+ LR I H++ +R
Sbjct: 226 HGEIAPSDARLEKIFQYLQNSPQVRDVLISGGDPLALKDEKLAYILRRLREIPHIEFVRI 285
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+++P V PQRI PEL+ ++ PV++++H HP E + E+ A RLA+AGI L SQ
Sbjct: 286 GTKMPAVLPQRITPELVNAIRPY-HPVWMSLHFLHPDECTPESKQACERLADAGIPLGSQ 344
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND+ E + L + R++PYYL+ D +G++HFR ++ +G +I++ L+
Sbjct: 345 TVLLKGVNDNVETMKQLTHKLLMNRVRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGH 404
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P Y++D PGG GK+ + + +G + + + YP +
Sbjct: 405 TTGYAVPTYVIDAPGGGGKIPLQPDAVVGREDGHLVLRNFEGKLFRYPDPDA 456
>gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
Length = 439
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q
Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLPGG GK+ I + Y I ++ +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399
>gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
Length = 439
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q
Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLPGG GK+ I + Y I ++ +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399
>gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
Length = 357
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 179/348 (51%), Positives = 243/348 (69%), Gaps = 4/348 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L + L+ +E + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 10 TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L I P ER DPIGDN SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K + L
Sbjct: 70 LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+RFH+RVP+
Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R+ E+ + L ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G
Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++ L+ +SGLCQ
Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK+ + + + +G + D+ VH YPP
Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPPA 357
>gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
Length = 401
Score = 456 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL++ ++T+A +L I +Q +EIKE + + +++TP A+LI+ + PI Q
Sbjct: 22 WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+PQKEEL E EDP+ + SP+ G+ HRYPDR+LL + + C ++CR C R+ VG
Sbjct: 81 VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T +A + YI+ Q+ +V+ +GGDPL+L +L+K++ L+ I HV+I+R
Sbjct: 141 GN-TQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVRL 199
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+V PQRI+ ELI LK+ P++I H NH E + + A+++LA+ G L +Q
Sbjct: 200 GSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGNQ 258
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+ IND P ++ +LM V R++PYYL+ DL+ G HFR +I G +I+ SL
Sbjct: 259 TVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIGH 318
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ I + + + + ++ + Y
Sbjct: 319 TSGFAVPRYVVDAPGGGGKIPISPNYVISSSSQKTILRNYEGDIVAY 365
>gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
OM5]
Length = 357
Score = 456 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L NL+ ++ + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E
Sbjct: 11 TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ER DPIGD HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 71 LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S A+ YI+ +IWEVI TGGDPL+LS +RL+++ L I HV+I+RFH+RVPI
Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP+R+ E+ L+ ++A+HANHP E + A AA +RL + GI L+SQSVLL+G
Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++ L+ +SGLCQ
Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
P Y+LD+PGG+GK+ + + G G + D+ VH YPP+
Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357
>gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 420
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 132/347 (38%), Positives = 206/347 (59%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T+ +L N + E+ ++ +A+TP A+L++P NP DPI +Q
Sbjct: 24 WQLANR-VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQA 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + SP+ GI HRYPDR+LL L C +YCR C RR + G
Sbjct: 83 VPLAAELQFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG- 141
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ L +AAL YI++ + I +V+ +GGD L+L+ RL +L++LR I HV+I+R
Sbjct: 142 KTDRALPPARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI PEL L+ PVY+ +H NHP E + EA A LA+AG+ L +Q
Sbjct: 202 GTRTPVVLPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+ND P ++ +LM + + +R++PYYL+ DL+ G HFR T+ +G +I+ L+
Sbjct: 261 TVLLRGVNDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGH 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P Y++D PGG GK+ + + + ++ ++ Y
Sbjct: 321 TSGLAVPTYVVDAPGGGGKIPVAPQYMISQSERMVILRNYEGVITAY 367
>gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
Length = 439
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q
Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRI 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLPGG GK+ I + Y I ++ +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399
>gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
Length = 426
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 204/347 (58%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ L +A ++ + +++ +I +I + + + +TP A+L++ ++P P+ Q
Sbjct: 33 WQVANR-LGTADEIAEVINLTEQEKADITKILDGFRVGITPYYASLMDENDPMCPVRMQA 91
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + + DP+ ++ SP G+ HRYPDR+L + C +YCR C RR + G
Sbjct: 92 VPTILEAHRSEADLLDPLHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAG- 150
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S +D +A +AYI++ Q+ +V+ +GGD L++ L+ V+K LR I HV+++R
Sbjct: 151 ETDGARSIEDIDACIAYIKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRI 210
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+V PQRI PEL++ L++ PV++ H NH E ++ + AA++ LA+AGI L +Q
Sbjct: 211 GSRTPVVCPQRITPELVKMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQ 269
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND P + L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+
Sbjct: 270 SVLLRGLNDCPHKMRELVHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGH 329
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P +++D PGG GK + + + ++ ++ Y
Sbjct: 330 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQTPHKVILRNYEGVITTY 376
>gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes
195]
gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195]
Length = 439
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 128/344 (37%), Positives = 195/344 (56%), Gaps = 3/344 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q +++ +TS ++ + E+ +++ +S + ++ TP +L++ N NDP+ Q
Sbjct: 59 WQFKNR-VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQL 117
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELN DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+
Sbjct: 118 MPDTAELNFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRI 236
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+V PQRI+ EL L + G P+++ H NHP E +EE+ A RL AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQ 295
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGIND + +L + +++PYYL D GT HF IE G I+ L+
Sbjct: 296 SVLLKGINDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLPGG GK+ I + Y I ++ +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGDI 399
>gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
bacterium Y4I]
Length = 360
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+R++ + S + L + + + + + +TP A+L+ +P++P+ R IP
Sbjct: 1 MRNR-IRSQEALSRIFDLSDGEQEALARHQGGLPVGITPYYASLMGLDDPDEPLRRTHIP 59
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+E LP E DP+G+++ +P+ G+VHRYPDR+L C YCR+C R MVG
Sbjct: 60 VGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDRVLFLATGTCSTYCRYCTRSRMVGQAG 119
Query: 123 GTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G S + AL YI ++ +V+ +GGDPL ++ +L +L LR I HV+ +R
Sbjct: 120 GEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPLTIADDKLDYLLGRLRAIPHVEFIRLG 179
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+++PIV P R+ +L++ LK P++++IH HP E + EA A RLA+AGI L SQ+
Sbjct: 180 AKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTHPAELTPEATEACKRLADAGIPLGSQT 238
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKGIND +IL + + + R++PYYL+ D G++HFR + +G +I+ L+
Sbjct: 239 VLLKGINDSVDILKPMYQALLMRRVRPYYLYQCDPITGSAHFRTPVAKGLEIIEGLRGHT 298
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+G P +++D PGG GK+ + + + + NI++ YP
Sbjct: 299 TGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDLILRNFENILYRYPDPGG 349
>gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
BL2]
Length = 363
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 192/349 (55%), Positives = 250/349 (71%), Gaps = 1/349 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
LR KTL SA DL A L + EI+ + Y IA+TP IA LI+ PNDPIARQF+P
Sbjct: 13 LRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFVP 72
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL+ PE+ DPIGD +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG K
Sbjct: 73 DIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPGK 132
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS + +AALAYI +IWEVI TGGDP LS +RL ++++ L I+HV+I+R H+
Sbjct: 133 SAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVHT 192
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP VDP I+ LI LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQSV
Sbjct: 193 RVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQSV 252
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++ L+ ++S
Sbjct: 253 LLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRLS 312
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350
GLCQP Y+LD+PGG+GK I I+ G NG + + D+ H YPP+
Sbjct: 313 GLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361
>gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 527
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 199/351 (56%), Gaps = 4/351 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q ++ +TS L + +E+ +A+TP A +PHNP P+ R
Sbjct: 156 WQYANR-ITSLGVLGTMLGLSEEE-AGAGTGLAALPLAVTPYYAAQFDPHNPAHPLRRTM 213
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE ++ P E DP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG
Sbjct: 214 VPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDRVLFLATDSCSAYCRYCTRSRRVGK 273
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + AA+ YI+ ++ +V+ +GGDPL ++ L +L LR I HV+ +R
Sbjct: 274 PCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLTMTDSALNHLLSQLRRIPHVEFIRI 333
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++ PIV PQRI P L++ L+ P++++IH HP E + EA A++RLA+ GI L SQ
Sbjct: 334 GTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHPDELTPEASQALNRLADGGIPLGSQ 392
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND+ + LM+ ++ R++PYYL+H D G++HFR I +G +I+ ++
Sbjct: 393 TVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDPVQGSAHFRTPIYKGVEIIRGMRGF 452
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH-DYPPK 350
+G P Y++D PGG GK+ + ++ + ++ ++ Y P
Sbjct: 453 TTGYAVPTYVVDAPGGGGKIPLMPDYVQGYDGEELVMRNYEGGLYRSYDPA 503
>gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021]
gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021]
gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
BL225C]
Length = 350
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 199/346 (57%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + +A++L +A L+ +EQ + I +++ Y++A++P IA L++ +PNDPIARQF+P
Sbjct: 5 RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + +AALAYI + +IWEVI TGGDPL+LS +RL ++ L I HV+++RFH+RVP
Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + I+ G G Y +TD HDYPPK
Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350
>gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
WSM419]
Length = 350
Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats.
Identities = 195/346 (56%), Positives = 264/346 (76%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ + +DL A LI +E+ + I ++ Y++A++P I+ L++ +P+DPIARQF+P
Sbjct: 5 RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +
Sbjct: 65 ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + + A+AYI +IWEVI TGGDPL+LS +RL ++++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V+P R++ LI LK +GK Y+A+HANHP E + A AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP YILD+PGG+GK + +I+ G G Y +TD H YPPK
Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350
>gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 431
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 126/344 (36%), Positives = 198/344 (57%), Gaps = 4/344 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH+ +T+ ++L + + IK ++ + +A+TP +LINP + DPI RQ
Sbjct: 51 WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL REDP+ +++HS + G+VHRYPDR L+ L +CP+ CR C R+
Sbjct: 110 VPSVHELTGEAG-REDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKREW-R 167
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ G V +S +A + YI Q+ ++I +GGDPL LS +RL++VL LR I HV+I+R
Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+V PQRI+ EL + L + P+++ H NHP E + EA AA RL AG+ + +Q
Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKYS-PIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND NL + + ++PYYL D GT H +E G +I+ ++
Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P Y++DLP G GK+ + + + + ++ +
Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPLSPNYVISHTKHELTVRNYEGHI 390
>gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
4-46]
Length = 356
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ + + ++ +++ Y++A+TP +A+LI P D I RQF+P
Sbjct: 1 MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIET--PEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ EEL+ P ER DPIGD H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG
Sbjct: 59 RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
LS +AALAY+ + +IWEV+ TGGDP +LS +RL+++ L HV++LR H+
Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP V+P+R++ L+ LK G+ V++A+HANHP EF+ A AAI+RL +AGI L+SQSV
Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++ GQ ++ L+ ++S
Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
GLCQP Y+LD+PGG+GKV + ++ G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346
>gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
Length = 349
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KT+ + ++L L+ E E+ ++ Y+IA+TP + LI+P++P DPIA QF+PQ
Sbjct: 6 KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG +
Sbjct: 66 ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS +AA+ YI++ IWEVIFTGGDPL+LS +RL+ +L+ L I HV+I+RFHSRVP
Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI+ +LI L+ +GK YIAIHANHP E + +A AA ++L AG LLSQ+VLLK
Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L +SGLC
Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG+GK ID I K G+ Y +TD H H Y
Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346
>gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
Length = 427
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 195/348 (56%), Gaps = 5/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
L+++ +TS + L + +E+ + I+++ Y A++P +L+ +P+ PI RQ
Sbjct: 74 WHLKNR-ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLM-GEDPSCPIRRQA 131
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL DP+ + SP GI RYPDR+++ + + C +YCR C RR +G
Sbjct: 132 LPSAAELEDEVG-SLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG- 189
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + E AL YI++ +I +V+ TGGD L+LS L +L L I HV+I R
Sbjct: 190 EVDRDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRI 249
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ PQRI L + L + P+Y+ NHP E ++EA AA RLA AG++L +Q
Sbjct: 250 GTRVPVTLPQRITDNLCRILAKHP-PIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQ 308
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+N+ P I+ L + +++R++PYYL L GT+HF IEEG +I+ L+
Sbjct: 309 AVLLRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGY 368
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P YI++ P G GK+ I + + + N + YP
Sbjct: 369 TSGLAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416
>gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
nodulans ORS 2060]
Length = 356
Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ +TL L A L+ ++ E++ ++ Y++A+TP +A LI P D I RQF+P
Sbjct: 1 MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELI--EAPEDGIGRQFLP 58
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL+ P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG +
Sbjct: 59 SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L + +AALAYI + +IWEV+ TGGDP +L+ +RL+++ L ++HV++LR H+
Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+VDP R++ L+ LK G+ V++A+HANHP EF+ + AA++RL +AGI L+SQSV
Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDD E L LMR FVE R+KPYYLHH DLA GT HFR + EGQ ++ L+ ++S
Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
GLCQP Y+LD+PGG+GKV + + G G + +TD H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345
>gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2]
gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2]
Length = 363
Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 185/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L E D++++++ Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E
Sbjct: 14 TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G K L
Sbjct: 74 LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +R+ +++ L I HV+I+RFH+RVP+
Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI PEL++ L+ GK ++A+HANHP E + A AA + L +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK I + + + Y + D+ VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362
>gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
Length = 353
Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL S L +A L+ + ++ ++ ++ +++A+TP +A L++P +P DP+ARQF+P
Sbjct: 10 RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL PEE DPIGD SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG T
Sbjct: 70 AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L D +AAL YI + +IWEVI TGGDPLILS +RL +++ L I HV I+R HSRV
Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+VDP+R+ EL+ L+ ++ +HANH E +EEA AAI+RL +AGI +LSQSVLL
Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+NDD E LA R V R+KP+YLH DLA GT+HFR T+ EGQ ++ +L+ +SGL
Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GKV + + + G G + +TD H Y
Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351
>gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
autotrophicus Py2]
Length = 362
Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L D + ++ Y++A+TP + + I+ +P DPIARQF+P E
Sbjct: 19 TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L + PEE DPIGD HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG L
Sbjct: 79 LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + E A AY+ +IWEVI TGGDP +LS +R+ +V+ L I HV+I+RFH+RVPI
Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R++ LI LK G Y+A+H NH E + +A +A++R+A+AGI LLSQSVLL+G
Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I GQ+++ +L+ ++SG+
Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGG GKV + +I G ++D+ VH YPP+
Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361
>gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris TIE-1]
Length = 363
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 180/349 (51%), Positives = 246/349 (70%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L++ L+ GK ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + + Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362
>gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51]
gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
hafniense DCB-2]
Length = 413
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 133/348 (38%), Positives = 198/348 (56%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + A++L + +Q EI E+ Y A++P +LI+ +P DPI Q
Sbjct: 68 WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EE+ E DP+G+ SP I RYPDR+++ + ++C +YCR C RR +G
Sbjct: 127 LPSVEEILDDSGE-ADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG- 184
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + EAAL YI+ +I +V+ TGGD L+LS + L +L L IKHV+I R
Sbjct: 185 EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKRI 244
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P RI EL L++ P+YI NHP E +EE A RL AG+IL +Q
Sbjct: 245 GTRVPVTLPMRITDELCAILEKYP-PLYINTQFNHPQEVTEETKKAADRLIKAGVILGNQ 303
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIND PEI+ L + +++R++PYY+ H GTSHF I++G +I+ +L+
Sbjct: 304 AVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRGY 363
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P YI++ PGG GK I + + + I V YP
Sbjct: 364 TSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411
>gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 419
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 196/350 (56%), Gaps = 4/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R+ LT+A++ + E+ + + + + TP A+L++P + PI +Q
Sbjct: 38 WQARN-MLTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQA 96
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP + EL+ PEE DP+G+++ SP +VH+YPDR+LL +L C +YCR C RR +VG
Sbjct: 97 IPSRRELDFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGG 156
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ D +A + YI QI +V+ +GGDPL+LS+ RL +L LR I+HV+I+R
Sbjct: 157 --DAPPARDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRI 214
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+V P RI+ EL L+ P+YI H NHP E + EA AA RL ++GI + +Q
Sbjct: 215 GTRLPVVLPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQ 273
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+N + LMR + +R++PYYL D GT H R ++ ++ L+
Sbjct: 274 AVLLRGVNSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGW 333
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG+ P ++D PGG GK+ + + + + V YP
Sbjct: 334 TSGMAIPHMVIDAPGGGGKLPFGPEYVLERHPDHVLVRTYRGRVVRYPEP 383
>gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
D9]
Length = 375
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+RH+ LT + + E+ + +++A+TP A+L++P + N P+ Q
Sbjct: 28 WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+KEEL + + DP G++N SP+ GIVHRYPDR+LL L C YCR+C R +V S
Sbjct: 87 IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLV-S 145
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q +A + Y+++ +++ +V+ +GGDPL++S++ L +L LR I H++ +R
Sbjct: 146 QGEMTPIKHRLDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP PQRI PEL++ L++ V++++H H E + E A LA+ GI L Q
Sbjct: 206 GSRVPCFLPQRITPELVKVLRKHR--VWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND + L NL ++LR++PYYL+ D GTSH R +I+ G +++ L+
Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GKV I + NG + + + Y
Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370
>gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110]
gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110]
Length = 364
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 171/357 (47%), Positives = 240/357 (67%), Gaps = 11/357 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +L +L + ++ ++ Y++A+TP + LI+ +P+DPIARQF+P
Sbjct: 8 RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + P E DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG K
Sbjct: 68 ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS AA+ YI+ +IWEVI TGGDPL+LS +R+ +++ L I HV+I+R H+RVP
Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP R++ E++ LK AG ++A+HANH E +E A AA +RL +AGI ++SQSVLL+
Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++ L+ ++SGLC
Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307
Query: 306 QPFYILDLPGGYGKVKIDTHNI-----------KKVGNGSYCITDHHNIVHDYPPKS 351
QP Y++D+PGG GK + + + + Y I D+ VH YPP++
Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364
>gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 188/344 (54%), Positives = 243/344 (70%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S DL A LI EQ + E+ ++I LT ++A+LIN ++P DPIARQF+P E
Sbjct: 12 ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEE +DPIGD SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG L
Sbjct: 72 ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +AA AYI IWEVI TGGDPLILS +RL ++L+ L I HV+ILR H+RVP
Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
VDP+RI P+L+ L+ + K VY+A+HANHP E + +A A + +AGI +LSQSVLL+G
Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++ L+ +SGLCQ
Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P Y+LDLPGG+GK + + + + + D+ ++H YPPK
Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355
>gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
chloromethanicum CM4]
Length = 353
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI++L +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + +GQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C]
Length = 419
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 186/347 (53%), Gaps = 3/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +L S Q L ++ ++ +E++ Y +TP +LI+ NPNDPI RQ
Sbjct: 35 WQLSN-SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQG 93
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL+ DP+ + S + G+VHRYPDR L + C +YCR C R+ M
Sbjct: 94 IPDLSELDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMWH- 152
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + S + A + YI+ + I EVI +GGDPL ++ + L L LR I +++LR
Sbjct: 153 EGESFRSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRI 212
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+V P I EL+Q L P+++ NHP E + +I A R+ AGI + +Q
Sbjct: 213 GTRLPVVLPMAITDELVQMLARHR-PLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQ 271
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND E++ +L + ++PYYL D +G HFR +I +G +I+ ++
Sbjct: 272 SVLLRGVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGH 331
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
GLC P +++D PGG GKV + + + ++ + Y
Sbjct: 332 TGGLCIPTFVVDAPGGGGKVPLQPFYLLSTSEDEVLLRNYEGSIIRY 378
>gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
extorquens PA1]
Length = 353
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ +P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347
>gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
Length = 384
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 201/347 (57%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+RH+ L+ + + + + +++A+TP A+L++P +P P+ Q
Sbjct: 38 WQMRHR-LSKLEHFQGLLKLTAAEQRGLSIAPEKFAVAVTPHFASLLDPEDPLCPLRLQV 96
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P++EEL I + DP ++ SP+ G+VHRYPDR+LL L C YCR+C R +V S
Sbjct: 97 VPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYPDRVLLLALDTCAAYCRYCTRSRLV-S 155
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q ++ +A +AY++E +++ +V+ +GGDPL++S + L +L+ LR I H++ +R
Sbjct: 156 QGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDPLLMSDEPLDNLLRRLRAIPHIEFVRI 215
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP PQRI PEL+ L++ V++++H H E + E A LA+ GI L SQ
Sbjct: 216 GSRVPSFLPQRITPELVAVLRKHR--VWLSLHFCHLRELTPEVAQACDLLADGGIPLGSQ 273
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND + L +L ++LR++PYYL+ D GT+H R +++ G +++ L+
Sbjct: 274 TVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQCDPVIGTAHLRTSVQTGIDLISKLRGH 333
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G P Y++D PGG GKV I + NG + + + Y
Sbjct: 334 TTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGKTTVRNWEGKTYTY 380
>gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein
[Methylobacterium extorquens AM1]
Length = 353
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + L I HV++LRFH+RVP+
Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347
>gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR]
gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR]
Length = 448
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 189/350 (54%), Gaps = 4/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
++++ + + L + ++I++IK++ + A++P A+L++ +P+ P+ Q
Sbjct: 90 WHMKNR-IRDVEVLAQIIDLTDKEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQA 148
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL ++DP+G+ SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 149 IPSILELLDQSG-KDDPMGEEFTSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 207
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +AA+ YI+ +I +V+ TGGD L+LS+ L +L L I HV+I R
Sbjct: 208 VDRNKP-RSEIKAAIEYIRANPEIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRI 266
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI P+L + L++ P+YI NHP E + A +L AG +L +Q
Sbjct: 267 GTRTLVSMPQRITPQLCEILEKHP-PLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQ 325
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN++ ++ L +++RI+PYY+ H GTSHF +EEG KI+ L+
Sbjct: 326 AVLLNGINNNVHVMKKLNHELLKVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGY 385
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P YI++ P GYGK + + G I V YP K
Sbjct: 386 TSGLAVPTYIINAPKGYGKTPMLPEYLISSGEDEIVIRTWEKKVISYPNK 435
>gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 430
Score = 444 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 123/341 (36%), Positives = 195/341 (57%), Gaps = 3/341 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+ + +TS QDL + + + + +A+TP +L + P++ + R
Sbjct: 73 WQLKSR-ITSYQDLGSMLALSEAEQAA-ANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E + P E EDP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG
Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + K +AA+ YI + +V+ +GGDPL +S L +L +R I HV+++R
Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++ P+V PQRI P+L + L+ P+ I++H HP E S E+ A RLA+AGI L SQ
Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGINDD L +LM ++ R++PYYL+H D GT HFR ++ +G +++ L+
Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
SG P +++D PGG GK+ ++ I + +
Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYIVGQDGDDLVLRNFE 410
>gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
21756]
Length = 346
Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats.
Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL + L A LI E++ ++ ++ Y++A+TP +A LI+ +PNDPIARQF+P E
Sbjct: 5 KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD+ HSP+ GI+HRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI + QIWEVI TGGDP +LS +RL ++ L I+HV+++RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + +L+ LK + K VY+A+HANH E + A AA + L +AGI ++SQ+VLLK
Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+ +SGL
Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + G + D + H YPP +
Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345
>gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 393
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 115/350 (32%), Positives = 198/350 (56%), Gaps = 4/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + L S +D+ + + + + S A+TP A+L+ + D + R
Sbjct: 46 WQLAN-ILRSREDVEKIVKLSESEACAFETCSG-LPFAVTPYYASLLTGTSSCDAVRRTV 103
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E+ E +DP+G+++ SP+ G+VHRYPDR+L + C YCR+C R +G
Sbjct: 104 IPTHMEMIKGRGEADDPLGEDSCSPVDGLVHRYPDRVLFLVTEHCSTYCRYCTRSRKMGE 163
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ Q+ +V+ +GGDPL+L ++ +L++L I+HV+++R
Sbjct: 164 IHSGNI-KERWQKAIDYIKATPQVRDVLISGGDPLVLPDASIKWLLESLSAIEHVEMIRI 222
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
++ P+V PQRI LI+ LK + +P++++IH HP E + E + A + LA+AGI L SQ
Sbjct: 223 GTKAPVVLPQRITKSLIKILK-SVRPLFMSIHFTHPDELTAETVQACNMLADAGIPLGSQ 281
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND + L L +++R++PYYL+ D +G+ HFR +E G ++ L+
Sbjct: 282 TVLLKGVNDSVDTLKGLYHGLLKVRVRPYYLYQCDPISGSGHFRTKVETGLNMIKGLRGH 341
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+G P Y++D PGG GK+ + + G + ++ + YP +
Sbjct: 342 TTGYAIPNYVIDAPGGGGKIPLIPDYFQGKSEGQIMLKNYQGNTYLYPDE 391
>gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
BJ001]
Length = 353
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 173/343 (50%), Positives = 240/343 (69%), Gaps = 1/343 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A L+ E + ++ ++ Y++++T +A LI+ +P+DPIARQF+P+ EE
Sbjct: 4 ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG L
Sbjct: 64 IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI + +IWEV+ TGGDP LS +RL ++ TL I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ +++ LK+ V++A+HANHP EF+ A AAI+RL +AG+ ++SQSVLL+G
Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y+LD+PGG+GKV + +++ +G++ +TD VH YPP
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPP 345
>gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630]
gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26]
gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932]
gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255]
gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55]
gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34]
gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79]
gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile
QCD-32g58]
gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile]
gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
Length = 422
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI
Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G
Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI E LK+ PVYI H NHP E ++E+ A +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SG+ P YI++ P G GK + + G + V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401
>gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
Length = 347
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 179/346 (51%), Positives = 243/346 (70%), Gaps = 4/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L SAQ L A L+ E++ I+ ++ Y++A+TP +A LI+P N +DPIARQFIP +
Sbjct: 5 RPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIPSEA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 65 ELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLAN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + +AA AYI S+IWEVI TGGDPL+LS +RL+ + + L I+HV+++RFH+R+P
Sbjct: 125 LTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHTRIP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+VDP I E++ LK +GK VY+A+HANH E +E A AA +R+ +AG+ +LSQ+VLLK
Sbjct: 185 VVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTVLLK 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDPE L LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + SGLC
Sbjct: 245 GINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFSGLC 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+P G+GKV I + G + D + H YPP
Sbjct: 305 QPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPPVG 346
>gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42]
Length = 422
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI
Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G
Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SG+ P YI++ P G GK + + G + V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401
>gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63]
gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
Length = 422
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI
Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G
Sbjct: 121 IPTYIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SG+ P YI++ P G GK + + G + V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401
>gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 406
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q
Sbjct: 63 WQLKN-MITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF + IEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGR 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P YI++ P G GK I + + VG + + V +
Sbjct: 358 TSGMAVPTYIVNAPKGKGKTPILPNYLLYVGKDKVVLRNWEGEVFE 403
>gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum]
Length = 411
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 212/359 (59%), Gaps = 18/359 (5%)
Query: 1 MQ------LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
Q +RH + + AN + E+++ + Y I + +LI +P D
Sbjct: 4 WQKLLVEGIRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLI--SDPQD 55
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
PI Q IP E + EDP+G++ SP+ IVHRYPDR+L + + CP+YCR+C R
Sbjct: 56 PIGLQVIPDPAEWMD-ADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTR 114
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ +VG +G V+S ++ + YI+E ++ +VI +GGDPL+L + L+++L LR I+H
Sbjct: 115 KRLVGKPEG-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEH 173
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
++I+R +RVP PQR+ PEL + L P+Y+ +H NHP E + E+ A LA+AG
Sbjct: 174 LEIIRIGTRVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAG 232
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
I L Q+VL+KGINDD E+L L + +++R+KPYYL+ DL G +HFR +E+G I+
Sbjct: 233 IPLGCQTVLMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIM 292
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352
+L+ ISG+ P +++D PGG GK+ + + NG + ++ N ++ YP SS
Sbjct: 293 KALQGNISGMAIPHFVIDAPGGGGKIPVLADDYLLGRENGQVLLKNYENKIYSYPDVSS 351
>gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 370
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 129/347 (37%), Positives = 193/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + L + +++ + S + ++TP NL + +PN PI Q
Sbjct: 24 WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R
Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + SY ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367
>gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
denitrificans ATCC 51888]
Length = 356
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 176/347 (50%), Positives = 238/347 (68%), Gaps = 1/347 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
M + LTS DL A L D + + Y+I++TP +A+LI+P++P DPIARQF
Sbjct: 1 MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL ER DPIGD SP G+VHRYPDR+LLK+ VCPVYCRFCFRREMVG
Sbjct: 61 VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G LS+ D AA+AYI+ +WEVI TGGDPL+LS +R+++V + L I HV+ILR+
Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+RVP+VDP R+ ELI LK K V++ +H NH E + A A+++L +AGI L+SQ
Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++ L+++
Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+SGL P Y+LDLPG +GKV ++++ + G + D ++ H Y
Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESYASLESS-GRTRLRDAYDQEHIY 346
>gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4]
gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK
[Methylobacterium extorquens DM4]
Length = 353
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L SA L A L+ + + ++ ++ Y++++T +A LI+ +P DPIARQFIP+ EE
Sbjct: 4 ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ PEER DPIGD+ H + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG L
Sbjct: 64 IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347
>gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 365
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + L + +++I + S + ++TP L +P +PN PI Q
Sbjct: 19 WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EEL E++DP+ + P+KG+ HRYPDR L L HVC VYCRFC R+ V S
Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362
>gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 370
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 129/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + L + +++ + S + ++TP NL + +PN PI Q
Sbjct: 24 WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V
Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R
Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + SY + ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367
>gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
Length = 415
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 188/347 (54%), Gaps = 5/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ +TS L + + + + I ++ Y A++P +L+ P P+ PI RQ
Sbjct: 64 WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL DP+ + SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 122 LPSAAELEDN-HGVLDPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 179
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S ++ E AL YI++ +I +V+ TGGD L+LS + +L L I HV+I R
Sbjct: 180 EVDRSRSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVEIKRL 239
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ PQRI PEL + L + P+Y+ NHP E + A A RL AG++L +Q
Sbjct: 240 GTRVPVTMPQRITPELCRVLAKHP-PIYLNTQFNHPREVTAAAKEACDRLVQAGVVLGNQ 298
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+N+ P ++ L + +++R++PYY+ H GT+HF +IEEG +I+ L+
Sbjct: 299 AVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDKLRGY 358
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P G GK I + + + + Y
Sbjct: 359 TSGLAVPTYIINAPHGLGKTPILPQYVIARNDHQVILRTWEKRIIFY 405
>gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
radiotolerans JCM 2831]
Length = 347
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++ L SA DL +A LI + D + + Y++++TP +A LI+P +P+DPI RQF+P+
Sbjct: 2 NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E PEER DPIGD H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG
Sbjct: 62 AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L+ + +AALAYI + +IWEV+ TGGDP LS +RL + + L I HV+++R H+RV
Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P ++ L++ LK G+ V++A+HANHP EF+ A AA +RL +AGI L+ QSVLL
Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND+ L LMRT VE RIKPYYLHH DLA GT+H R + EGQ ++ +L+ ++SGL
Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV I ++ +G +TD H YPPK+
Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDG-VRVTDPGGQDHAYPPKA 347
>gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 412
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 110/351 (31%), Positives = 189/351 (53%), Gaps = 4/351 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ ++ + L + + + EI+++ Y A++P A+L++P +P P+ +Q
Sbjct: 63 WQLQNR-ISDVETLEKILNLTESERQEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQS 121
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E+ DP+ + +P + RYPDR+++ + + C +YCR C R+ +G
Sbjct: 122 IPSAQEVKDKAG-VTDPMAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIG- 179
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ E ++ Y++ ++I +V+ TGGD +LS + L +L LR I HV+I+R
Sbjct: 180 EVDKPTPKDVLEESIEYVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRL 239
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR P+ PQRI L L + P+Y+ NHP E + EA A +LA AG+ L +Q
Sbjct: 240 GSRTPVTMPQRITQNLCDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQ 298
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL IN+DP ++ L ++ ++PYY+ H GT+HF +E+G +I+ ++
Sbjct: 299 AVLLNTINNDPHVMKTLCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGY 358
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
SG+ P YI++ P G+GK I + G I N V +YP +
Sbjct: 359 TSGMAIPSYIINAPDGHGKTPIVPEYMISQGRDKVYIRTWENRVFEYPNDA 409
>gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 365
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + L + +++I + S + ++TP L P +PN PI Q
Sbjct: 19 WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EEL E++DP+ + P+KG+ HRYPDR+L L HVC VYCRFC R+ V S
Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
+ISGL P Y++DL GG GKV + T + + + SY ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362
>gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 411
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T+ + L + + + E++E+S Y A++P +LI+P +P+ I +Q
Sbjct: 66 WQLKNR-ITTPEVLRKILPLSDQVLWELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQS 124
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E+ E DP+ + SP+ + RYPDR+++ + ++C +YCR C RR +G
Sbjct: 125 IPSILEVLDDTGEL-DPMNEAGTSPVAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 182
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + AL YI+E +I +V+ TGGD L+LS L +LK L I HV+I R
Sbjct: 183 EVDRKTPREQIKEALLYIREHKEIRDVLITGGDALLLSDLELDWILKELSEIPHVEIKRI 242
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ PQR+ L++ LK+ P+YI NHP E + EA A+ +L AG++L +Q
Sbjct: 243 GTRVPVTLPQRVTDNLVKILKKYP-PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQ 301
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+ND+P I+ L +++R++PYY+ GT HF IE+G +I+ SL+
Sbjct: 302 AVLLKGVNDNPVIMEKLNHELLKIRVRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGY 361
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P+YI++ PGG+GK+ + + ++ + + + YP
Sbjct: 362 TSGLAVPYYIVNAPGGFGKIPLLPQYLIELSEEEAVLRNWEGRIIRYP 409
>gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 360
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 135/352 (38%), Positives = 202/352 (57%), Gaps = 10/352 (2%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q L ++T Q L + + +K ++ Y + + P +LIN P DPI RQ
Sbjct: 16 WQRLLAASITCPQALADRFGLDPA---PLKAVTARYPLRINPYYLSLINQ--PGDPIWRQ 70
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL DP+G+ ++SP+ G+VH+Y DR LL + C +YCRFC R+ VG
Sbjct: 71 AVPDVRELEDTVC-PADPLGEEDYSPVPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVG 129
Query: 120 SQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+++ S+ +AALAY+++ I +V+ +GGDPL+L RL +L LR I+H++I+
Sbjct: 130 TREMAAAGSAAQLDAALAYLEQTPAIHDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEII 189
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SRVP PQR+ +L LK+ P++I H NHP E + EA A RLA+AGI L
Sbjct: 190 RLGSRVPCTLPQRVTLKLAAALKKF-HPLFINTHFNHPREITPEAARACQRLADAGIPLG 248
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+NDD + LMR +++R+KPYYL DL+ GT HFR +E+G I+ L
Sbjct: 249 NQTVLLKGVNDDAATIRELMRGLLKIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELI 308
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P + LD P G GK+ + ++ +G+ T++ + YP
Sbjct: 309 GHTSGLATPTFALDAPEGRGKIPLTPDYLQSLGD-KLIFTNYQGLPCQYPNP 359
>gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 410
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH + + L + + ++E S + I ++P +LI+P +P P+ Q
Sbjct: 39 WQQRH-AVRGLEQLERYVPLTSNERAGVQETSALFRIGISPYYLSLIDPEHPFCPVRMQS 97
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP + E I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 98 IPVRAEARIRPGELADPLGEDKTRPEECIVHKYPDRVLFLALDTCSVYCRHCTRRRITQG 157
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
LS + + Y++ ++ +V+ +GGDP +LS RL+++L L I HV+++R
Sbjct: 158 GVAE-LSKEQLRRGVDYVRSHPEVRDVLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRI 216
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ L + L+ PV++ H NHP E + EA A RL + G+ + +Q
Sbjct: 217 GTRVPVCLPMRVTDALAKTLRRYA-PVFVVTHFNHPKEVTPEAREACERLVDHGVPVENQ 275
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VL++ +N D I+ L + R++PYYLH D+A G H R I +G +I+ L+
Sbjct: 276 AVLMRQLNSDARIIKELSHLLLRSRVRPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGY 335
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+GL P +DLPGG GKV + + G ++ YP
Sbjct: 336 TTGLAVPHLAVDLPGGGGKVTLQPDYAVEYGAQETVFRNYKGERFTYPEP 385
>gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG']
Length = 383
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 122/322 (37%), Positives = 194/322 (60%), Gaps = 6/322 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
E+ + + + +LI +P PI RQ IP EE+ + DP+G+++ SP+ I
Sbjct: 33 EVEKTFPVRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
VHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI
Sbjct: 90 VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRSEVEEGIEYIRTHPEVRDVIL 148
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+L L+ +L LR I H++I+R SRVP PQR+ PEL LK+ P+++
Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KPY
Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNIK 328
YL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I +
Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327
Query: 329 KVGNGSYCITDHHNIVHDYPPK 350
+ +G + ++ V+ YP
Sbjct: 328 SMEDGDVVLRNYEGNVYTYPDA 349
>gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454
gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
Length = 370
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 124/345 (35%), Positives = 202/345 (58%), Gaps = 8/345 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + +++ + E+ + IK Y A+TP +LINP +P DPI Q
Sbjct: 18 WQIQNR-IKTLKEIKKYLKLLPEEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQA 76
Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP+ E++ + D + + + G+ HRYPDR+LL + C VYCR C R+ +
Sbjct: 77 IPRVVEVDEKVQSAGEPDALKEEGD--IPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF 134
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
SQ + ++ + + YI+ +I +V+ +GG+PL LS ++L+ +L LR IKHV+I+
Sbjct: 135 -SQGERARTKEEIDTMIDYIKRHEEIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEII 193
Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
RF +R+P++ PQR N +L+ L++ P++I H NHP E +E A A+ RL GI +
Sbjct: 194 RFGTRLPVLAPQRFFNDKLLDILEKYS-PIWINTHFNHPNEITEYAEEAVDRLLRRGIPV 252
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKG+NDDPE++ L R + +++KP YL H D G HFR TI++G +I+ L
Sbjct: 253 NNQTVLLKGVNDDPEVMLKLFRKLLRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYL 312
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
+ ++SG P Y +DLPGG GKV + + +KK +
Sbjct: 313 RGRLSGFGIPTYAVDLPGGKGKVPLLPNYVKKRKGNKFWFESFTG 357
>gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255]
gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255]
Length = 366
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 179/354 (50%), Positives = 240/354 (67%), Gaps = 10/354 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +DL L + ++++++ Y+IA+TP +ANLI+P +P+DPIARQ++P +E
Sbjct: 12 TLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSADE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ER DPIGD+ SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 72 LAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+
Sbjct: 132 SKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R+ E+ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++ L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK + + Y ITD+ VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365
>gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 411
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 187/350 (53%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q
Sbjct: 47 WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+GL P +DLPGG GKV + + + G ++ + YP
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYPEP 393
>gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15]
gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15]
Length = 345
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 5 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 65 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + + D V YPP +
Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 345
>gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
Length = 365
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 181/355 (50%), Positives = 243/355 (68%), Gaps = 10/355 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
T+ +DL L + ++++++ Y+IA+TP +A LI+P +P+DPIARQ++P E
Sbjct: 11 TVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSANE 70
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 71 LAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETAL 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+
Sbjct: 131 SKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
D R+ E++ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G
Sbjct: 191 ADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLRG 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLCQ
Sbjct: 251 VNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLCQ 310
Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGKV + + + Y ITD+ VH YPP S
Sbjct: 311 PDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365
>gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
Length = 358
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E
Sbjct: 18 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + +
Sbjct: 78 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP
Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+
Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL
Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GKV + + + + D V YPP +
Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 358
>gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum]
Length = 383
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 122/323 (37%), Positives = 195/323 (60%), Gaps = 6/323 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E+ + I + +LI +P PI RQ IP EE+ + DP+G+++ SP+
Sbjct: 32 REVEKTFPIRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPA 88
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
IVHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI
Sbjct: 89 IVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTHPEVRDVI 147
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+L L+ +L LR I H++++R SRVP PQR+ PEL LK+ P++
Sbjct: 148 LSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLKKY-HPLF 206
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KP
Sbjct: 207 MNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKP 266
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNI 327
YYL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I +
Sbjct: 267 YYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYL 326
Query: 328 KKVGNGSYCITDHHNIVHDYPPK 350
+ +G + ++ V+ YP
Sbjct: 327 VSMEDGDVVLRNYEGNVYTYPDA 349
>gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
Length = 340
Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 134/345 (38%), Positives = 203/345 (58%), Gaps = 10/345 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L T+ + + L A + ++E++ I + I + P +LI P DPI +Q +
Sbjct: 6 RLVRDTVNTPEKLAAAFDVD---LEEMQRIHKEFPIRINPYYLSLIKE--PGDPIWKQVV 60
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL + EDP+ + + S + + HRYPDR L + ++CP+YCRFC R+ VG
Sbjct: 61 PDPREL--MSTGVEDPLHEEDDSEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDP 118
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+S + E LAYIQ +I +VI +GGDPL+L+ K++ ++ LR IKH++I+R
Sbjct: 119 H--SISEDNIETGLAYIQAHPEIRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIG 176
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVP+ PQRI PEL LK P YI H NHP E + E A LA+AGI L +Q+
Sbjct: 177 SRVPVTLPQRITPELCAILKRH-HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQA 235
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+NDDP+++ LM+ + +R+KPYY++ DL GT HFR ++ G IVA+L+ I
Sbjct: 236 VLLKGVNDDPDVMVELMKGLLRIRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHI 295
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SGL P Y++D PGG GK+ + + + + + ++ V+
Sbjct: 296 SGLGVPHYVVDAPGGGGKIALIPNPVVAFDDDEIQLRNYEGGVYS 340
>gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 411
Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 129/355 (36%), Positives = 195/355 (54%), Gaps = 6/355 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQ 59
QLRH L+SA +L+ A + E++ + I +TP +L + +P PI RQ
Sbjct: 58 WQLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQ 116
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +E +P + DP+G+ H +V RYPDR LL C VYCRFC R MVG
Sbjct: 117 CVPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVG 176
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
G ++ + A+AY++ ++ +VI +GGDPL +S R+ +++ LR I+ V+ +R
Sbjct: 177 D-GGGAVALERLAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIR 235
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+RVP+ PQRI EL++ LK P+++ H NHP E + A A RLA+ G +++
Sbjct: 236 LATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMN 294
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+GINDD LA L R V R++PYYL D GT+H R + G ++ L+
Sbjct: 295 QTVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQG 354
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352
+++G+ P I+D PGG GKV I + G + H + +Y PP S
Sbjct: 355 RLTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409
>gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
Length = 375
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 167/341 (48%), Positives = 228/341 (66%), Gaps = 1/341 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A DL A L + + + Y++A+TP + ++ + +DPIARQF+P E
Sbjct: 30 TLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVAE 89
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P+E DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T L
Sbjct: 90 LRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETAL 149
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E AL Y+ ++WEVI TGGDP ++S +R+ V+ L I HV+++RFH+RVPI
Sbjct: 150 TPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVPI 209
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+R++ E+++ LK G Y+A+H NH E + A AA+ RLA+AGI LLSQ+VLLKG
Sbjct: 210 AAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLKG 269
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L L R VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ Q
Sbjct: 270 VNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIAQ 329
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG GKV + + G G + + D+ +H Y
Sbjct: 330 PTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369
>gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
13855]
Length = 401
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ
Sbjct: 21 WQMQNR-IHSAEALRKWIRPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 80 VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF
Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ P RI +L L + P++I H NHP E + +A AAI RL +AGI + +Q
Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G I+ L+ +
Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y+LD P +GKV ++ +K + + + P
Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365
>gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
Length = 446
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 198/347 (57%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL H+ L S +D + + + + + + +TP +LINP +P+DPI +Q
Sbjct: 28 WQLSHR-LNSVEDFEQVLRLTESERKALT-TQGLFRVDITPYFVSLINPDDPDDPIRKQV 85
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP+ EE+ ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG
Sbjct: 86 IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T S + E + Y++ Q+ +V+ +GGDPL L+ K L+++L LR I+H++I+R
Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SRVP+ PQRI E + + PV++ IH NHP E ++E A RL AG+ L +Q
Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND + L++ V +R++PYYL+ DL G HFR + +G +I+ L+
Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG P Y++D PGG GK+ + + + + + + ++ + Y
Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPVMPNYLISMSDHKIILRNYEGYITTY 370
>gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 422
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59
Q+R++ + L + + + ++ IK +S A++P +LI+ N PI +Q
Sbjct: 74 WQMRNR-INDGNVLASILGLNEFEVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQ 132
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ E +DP+G+ SP I RYPDR+++ + + C +YCR C RR G
Sbjct: 133 SVPSLHEIIECKGE-DDPMGEEMSSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFG 191
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + KD EAAL YI+ S+I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 192 -ETDNHAAHKDLEAALQYIKNNSEIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKR 250
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R P+ PQRI L LK P+YI N P E + EA A RL AG++L +
Sbjct: 251 IGTRTPVTLPQRITANLCAVLKRH-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGN 309
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND+ ++ L + +++R++PYYL GT+HF + G I+ L+
Sbjct: 310 QAVLLKGINDNVHVMKKLNQELLKIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRG 369
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
SGL P Y+++ PGGYGK ++ + + I+ +YP +++
Sbjct: 370 YTSGLAIPTYVINAPGGYGKTPVNPEYVLDINENEVIISTWQGKTFNYPHRNN 422
>gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
Length = 378
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 212/350 (60%), Gaps = 8/350 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + S ++L + +E+++ I+ Y +A+TP +L++P + DPI Q
Sbjct: 28 WQIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQA 86
Query: 61 IPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP++ E++ D + + + G+ HRYPDR+L+ + C VYCR C R+ +
Sbjct: 87 IPRRIEVDEEAQSAGEPDALREEGD--IPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF 144
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
++ + ++ + L+YI+E ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+
Sbjct: 145 -AEGERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIV 203
Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
RF +R+P++ PQR + EL+ L++ P++I H NHP E +E A A+ RL GI +
Sbjct: 204 RFGTRLPVLAPQRFFDEELLSILEKYS-PIWINTHFNHPKEVTELAEEAVDRLLRHGIPV 262
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKG+ND+PEI+ +L R + +++KP YL H D G HFR T+++G +I+ L
Sbjct: 263 NNQTVLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFL 322
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ KISG+ P Y +DLPGG GKV + + + S+ + +Y
Sbjct: 323 RGKISGMGIPTYAVDLPGGKGKVPLQPNYVVGREGNSFLFESFTGELVEY 372
>gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 411
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 193/351 (54%), Gaps = 11/351 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINP-HNPNDPIARQ 59
QL+H+ +TS Q + + ++ A TP + ++ + R
Sbjct: 60 WQLKHR-VTSVQAMAGILGVDA---PVFEKSRRRLPAAATPYYL----WVASRSEALRRC 111
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E +LP E DP+G+ HSP+ GIVHRYPDR+L + C YCR+C R +VG
Sbjct: 112 ILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYCTRSRLVG 171
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ G + + AL YI++ ++ +V+ +GGDPL L +++ +L LR I HV+I+R
Sbjct: 172 -KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAIPHVEIVR 230
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
S+VP V PQRI P L++ L+ P++I++H HP E + + A +RLA+ GI L S
Sbjct: 231 IGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLADGGIPLGS 289
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL G+NDD E + LM V R++PYY++ D G+SHFR ++ G I+ L+
Sbjct: 290 QTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLSIIQGLRG 349
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG C P Y++D PGG GKV + + + ++ + + YP +
Sbjct: 350 HTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYPDQ 400
>gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter
thermophilus TK-6]
Length = 367
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 207/348 (59%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ L + +D+ + E+++ I+ Y +A+TP +LI P +PNDPI Q
Sbjct: 18 WQIKNR-LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQC 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP++EE++ + +P + G+ HRY DR+LL + C VYCR C R+ + +
Sbjct: 77 IPRREEVDENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-A 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q S+++ + YI+E +I +V+ +GG+PL LS+++L+ +L LR IKHV+I+RF
Sbjct: 136 QGERSRSTEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRF 195
Query: 181 HSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+ ++ PQR + +L+ L++ P++I H NHP E +EEA A+ RL GI + +
Sbjct: 196 GTRLLVLAPQRFFDNKLLDILEKYS-PIWINTHFNHPKEITEEAEEAVERLLRRGIPINN 254
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+ND+P+ + L R + +++KP YL H D G HFR +I++G +I+ L+
Sbjct: 255 QTVLLKGVNDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRG 314
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ISG+ P Y +DLPGG GKV + + I + V +Y
Sbjct: 315 RISGMGIPTYAVDLPGGKGKVPLMPNYIINREGDKFTFRSPFGDVVEY 362
>gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
Length = 418
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ ++ + L + +++ +EIK + Y A++P A LI+P N D I
Sbjct: 64 WQLINR-ISDIETLSLIVNLTEKEKEEIKNVGATYRWAISPYYAALIDPENKYDSIRLLS 122
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E PE DP+G+ +P I RYPDR+++ + C +YCR C RR +G
Sbjct: 123 VPTGSE-AAHPEGEVDPMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG- 180
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T S ++ YI+ +I +V+ TGGD L LS KRL+ +LK L+ I HV +R
Sbjct: 181 ETDTHKSDAVIMESIDYIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRL 240
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI EL+ LK+ +P+YI H NHP E + E A +LAN GI L +Q
Sbjct: 241 GTRTLVTMPQRITDELVDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQ 299
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN+D ++ L +++R++PYY+ H GT HF ++++G +I+ L+
Sbjct: 300 AVLLNGINNDKYVMRLLNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGY 359
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P YI++ P G GK I + S I +V DY
Sbjct: 360 TSGMAIPTYIINAPKGQGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406
>gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
14484]
Length = 367
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 200/349 (57%), Gaps = 6/349 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + +L + E+ + I+ Y +A+TP +LI+PH+P DPI Q
Sbjct: 18 WQIQNR-IKTIHELTRYIKLLPEEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQA 76
Query: 61 IPQKEELNIL--PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP+ E + ED + + + + HRYPDR+L+++ C VYCR C R+ +
Sbjct: 77 IPRAIETDPYVQSYGEEDALREEGQ--IPHMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF 134
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
SQ ++ ++ + + YI+ + +V+ +GGDPL LS+++L+ +L LR I HV+I+
Sbjct: 135 -SQGERSITKEEIDTIIQYIEAHPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEII 193
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R +R+P++ PQR E + L E P++I H NHP E + A A+ L GI +
Sbjct: 194 RIGTRLPVLAPQRFFDEKLLKLLERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVN 253
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+NDDP+++ LMR+ + +++KP YL H D G HFR ++E+G +I+ L+
Sbjct: 254 NQTVLLKGVNDDPQVMLELMRSLLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLR 313
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
KISG+ P Y +DLPGG GKV + + + Y + +Y
Sbjct: 314 GKISGMGIPTYAVDLPGGKGKVPLLPSYLVRKEGNRYTFRSFTGELVEY 362
>gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
Length = 344
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 169/343 (49%), Positives = 230/343 (67%), Gaps = 6/343 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL +AQDL++A LI ++ + ++ Y++ALTP + +LI+P +P DPIARQ++P
Sbjct: 4 RRTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSA 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EEL PEE DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG
Sbjct: 62 EELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-GDA 120
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
++ + + ALAY+ + +I EVI TGGDPL+L RL +L + I HV+++R HSRV
Sbjct: 121 TMTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRV 180
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ DP+R+ P+L + L KPV++A+H NHP+E S A + RLA G+ LLSQ+VLL
Sbjct: 181 PVSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLL 240
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+ND +L L R V R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+
Sbjct: 241 KGVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGI 300
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
QP Y+LD+PGG GKV + + D +HDY
Sbjct: 301 AQPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340
>gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
palustris DX-1]
Length = 363
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL ++L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE
Sbjct: 14 TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L
Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P+L+Q L+ K ++A+HANHP EF+ A A +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP+ L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ
Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGK + + + N Y + D+ VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363
>gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 432
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 201/347 (57%), Gaps = 5/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ H+ + + L + + +E+ +I+++ + +++P A+LI P + NDP+ Q
Sbjct: 74 WQISHR-INDVELLSSLIQLSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQS 132
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +EL++ DP+ + SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 133 VPSIKELDVSGY--ADPMAEELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGD 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +D AAL YI++ +I +V+ TGGD L+LS K++ +L L IKHV+I R
Sbjct: 191 -VDRHQTHQDLLAALDYIRKNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRL 249
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI PEL + LK+ PVYI NHP E + E+ A L +AG++L +Q
Sbjct: 250 GTRTIVTLPQRITPELCEVLKQHP-PVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQ 308
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIN++P ++ L + +++R++PYY+ H GT HF ++ EG +I+ L+
Sbjct: 309 AVLLKGINNNPHVMKKLNQELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGY 368
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK+ I + + N S + + N DY
Sbjct: 369 TSGLAVPTYIINAPNGYGKIPILPKYLLGIDNSSVRLRNWENRQIDY 415
>gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
Length = 344
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 129/343 (37%), Positives = 197/343 (57%), Gaps = 11/343 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++L + Q + Y + +TP LI P DPI RQ +P EL
Sbjct: 12 ITSPEELSGLFRL---QGGAFSPVVERYPMRITPYYLGLI--EEPGDPIWRQCVPDPAEL 66
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ L + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++
Sbjct: 67 DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A+AYI +I +V+ +GGDPL+L RL +L L I HV+I+R +R P+
Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI P L + LK + PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
Y++DLPGG GKV + G + T++ +YP
Sbjct: 302 HYVIDLPGGKGKVDV-LSGRPGSGGRTLLFTNYLGEEIEYPEP 343
>gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14]
gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14]
Length = 366
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 180/354 (50%), Positives = 242/354 (68%), Gaps = 10/354 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +DL L + ++ ++ Y+IA+TP +A+LI+P +P+DPIARQ++P +E
Sbjct: 12 TLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVDE 71
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L
Sbjct: 72 LAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R HSRVP+
Sbjct: 132 SKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP R++ E++ LK AG ++A+HANHP E + A +A +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLCQ 311
Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPK 350
P Y+LD+PGGYGK + + + Y I D+ VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365
>gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
AK83]
Length = 377
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 122/362 (33%), Positives = 191/362 (52%), Gaps = 17/362 (4%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + ++T+ ++L + E+ + ++S Y +TP +LIN + NDP+ Q
Sbjct: 17 WQLAN-SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQA 75
Query: 61 IPQKEELNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+P EL L + E+P+ + + IVHRYPDR+L L + C Y
Sbjct: 76 VPDIRELQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATY 135
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
CR C R+ G Q + +AYI E+ +I +V+ +GGDPL L +L+ VL
Sbjct: 136 CRHCSRKVHAG-QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSR 194
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
LR + HVQI+R +R P+ PQRI E + +K+ P++I H NHP E + EA AI
Sbjct: 195 LRQLPHVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIE 253
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
RL AG+ + +QSVLLKGIND E++ L+ + R++PYYL+H DL G HFR +I+
Sbjct: 254 RLLEAGVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSID 313
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G I+ +L+ +G P Y++ P GK ++ + + G G + ++ P
Sbjct: 314 VGMHIIENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPGYIVLRNYEWRTWRDP 371
Query: 349 PK 350
+
Sbjct: 372 DR 373
>gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
Length = 401
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 116/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ
Sbjct: 21 WQMQNR-IHSAEALRKWIHPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG
Sbjct: 80 VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF
Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+ P RI +L L + P++I H NHP E +++A AAI RL +AGI + +Q
Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G + L+ +
Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y+LD P +GKV ++ +K + + + P
Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365
>gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
Length = 364
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L + ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS AL YI+ +IWEVI TGGDPL+LS +RL +++ L I+HV+I+R H+R
Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DP RI P L++ LK G +++A+HANHP E S + AA +RL +AGI L+SQSVL
Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + I Y + D+ H YPP
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363
>gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
Length = 347
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 134/348 (38%), Positives = 201/348 (57%), Gaps = 11/348 (3%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q KT +T+ +L + E +I +++ Y + +T LI P D I RQ
Sbjct: 4 WQKNLKTCVTAPDELSPLFNLDTE---DIAQVAKRYPMRITRYYLGLIER--PGDAIWRQ 58
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP E + EDP+ + SP+ G++HRYPDR++ + VC VYCRFC R+ VG
Sbjct: 59 CIPDPLEFEDQA-QMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVG 117
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ T ++ +A LAYI +I +VI +GGDP +L L+++L LR I HV+I+R
Sbjct: 118 CTEATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIR 175
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R + P+RI L + LK+ P+Y+ H NHP E + + A +RLA+AGI L +
Sbjct: 176 IGTRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGN 234
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGINDDP+++ LM+ +++R+KPYYLH DL GT+HFR +I+ G +I+ L+
Sbjct: 235 QTVLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRG 294
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P+Y +DL GG GKV + + + + S I + V Y
Sbjct: 295 HTSGLASPYYAIDLEGGKGKVPLLPEYV-RRDDDSLLIRSYRGEVVRY 341
>gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 419
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 4/350 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R + +T+ + L + ++ I +I ++S Y A++P A ++ PI Q
Sbjct: 73 WQMRKR-ITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E+ DP+ + SP+ GI RYPDR+++ + + C +YCR C RR +G
Sbjct: 132 VPSTAEITDARG-TTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 189
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + EAAL YI+E +I +V+ TGGD L+LS L +L L I HV+I R
Sbjct: 190 EVDRHQPRRVLEAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVEIKRL 249
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI L L+ P+YI NHP E + EA+ A RL AG++L +Q
Sbjct: 250 GTRALVTLPQRITAGLCAVLERYP-PIYINSQFNHPLEVTPEAVQACDRLVRAGVVLGNQ 308
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIN+DP ++ L + R++PYY+ H GTSHF +EEG I+ L+
Sbjct: 309 AVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQLRGY 368
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P YI++ PGGYGK + + + + N V YP +
Sbjct: 369 TSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYPNR 418
>gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus
UQM 2246]
Length = 481
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 119/349 (34%), Positives = 198/349 (56%), Gaps = 4/349 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q ++ ++ S + L E+++ + E+ + Y +A+ P +LI+P +PNDPI Q
Sbjct: 50 WQTQN-SIRSVRQLRTLLSFTPEELEALGELESEYKLAIPPYFFSLIDPEDPNDPIRLQS 108
Query: 61 IPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E +DP+ + SP+ G+ HRY DR LL C +YCR+C R+
Sbjct: 109 VPSPLEAESASGHELDDPLEEEKDSPVPGLTHRYSDRALLVTTPNCTMYCRYCTRKRATL 168
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ G S D E + Y++E +I +VI +GGDPL L +L+ L++L+ +KHV ++R
Sbjct: 169 TRGGWEGVSADDERMIQYVREHREIKDVIVSGGDPLTLPMGKLRYYLESLKAMKHVDVIR 228
Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+RVP+ PQR+ +PELI L A K VY+ H NHP E + EA+ A L AG+ +
Sbjct: 229 VGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTHFNHPREVTPEAVRACKSLLRAGVPIN 287
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+ +VLLKG+NDD + +L R + +++PYYL H D G HFR ++ +G +I+ L+
Sbjct: 288 NHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLFHCDPVTGAGHFRTSVWKGLEIMEGLR 347
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+SG+ P Y++D P G GK+ I + + + + + ++ ++ Y
Sbjct: 348 GHMSGIGIPTYVVDGPQGSGKIPILPNYLISMSDDVVVLRNYEGMIVRY 396
>gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 343
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 170/346 (49%), Positives = 231/346 (66%), Gaps = 6/346 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+R TL +AQDL +A LI+ +++++ Y++ LTP + +LI+P +P DPIARQ++P
Sbjct: 4 VRRHTLRTAQDLLDAGLIRDA--AAVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EEL EER DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG
Sbjct: 62 SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-G 120
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
++ + EAALAY+ + I EVI TGGDPL+L RL +L + I HV+++R HS
Sbjct: 121 EATMTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ DP RI P+L L KPV++A+H NHP E S A A +S LA AG+ LLSQ+V
Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+ND ++L +L R + R++PYYLHHPDLA GTSHFR +I+EGQ ++ L+ ++S
Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G+ QP Y+LD+PGG GKV + + D ++ H YP
Sbjct: 301 GIAQPTYVLDIPGGAGKVPVGPGYWDGEEG---VVIDPNDAEHSYP 343
>gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 353
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 161/345 (46%), Positives = 228/345 (66%), Gaps = 5/345 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
++L DL A L+ + Q + ++ IA+TP +A+LI+ + DPIARQ++P
Sbjct: 12 SRSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNA 71
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL++ EER DPIGD+ SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG GT
Sbjct: 72 AELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT 131
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS+ + + ALAY+ ++ + E+I TGGDPL+L+ RL ++ + + H+++LRFHSRV
Sbjct: 132 -LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRV 190
Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
P+ DP+R++ + LK V++++H NHP E S A A+ RLA+AG+ L+SQSVL
Sbjct: 191 PVADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVL 250
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKG+NDDP +L L R + R++PYYLHHPDL GTSHFR ++ EGQ I+ +L+ ++SG
Sbjct: 251 LKGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSG 310
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+ QP Y+LD+PGG GKV + +TD H YP
Sbjct: 311 IAQPTYVLDIPGGAGKVPVGPDW---WDGERLQVTDWRGRRHPYP 352
>gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
Length = 344
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 129/343 (37%), Positives = 195/343 (56%), Gaps = 11/343 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+TS ++L + Q + + Y + +TP LI DPI RQ +P EL
Sbjct: 12 ITSPEELSGLFRL---QGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++
Sbjct: 67 CD-PSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A+AYI +I +V+ +GGDPL+L L +L L I HV+I+R SRVP+
Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI P L + LK PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
Y++DLPGG GKV + + G T++ +YP
Sbjct: 302 HYVIDLPGGKGKVDVLSGRPGSDGRN-LVFTNYKGEEIEYPEP 343
>gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
Length = 343
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 136/342 (39%), Positives = 209/342 (61%), Gaps = 11/342 (3%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS ++L + Q ++ + Y + +TP LI P DPI RQ +P E
Sbjct: 10 RCITSPEELSGLF---RSQGADLTCVVRRYPMRITPYYLGLIRE--PGDPIWRQCVPDPE 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
ELN + + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Q
Sbjct: 65 ELNDV-TQSPDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+S + ++AYI K QI +VI +GGDPL+LS RL +L LR I HV+I+R +RVP
Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P+RI +L + LK +P+Y+ H NHP E +E++ A +RLA+AGI L +QSVLLK
Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDP+++ LM+ + +R++PYY+H DL GT+HFR + +G ++A+L+ SGL
Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++DLPGG GKV++ + G ++++ +Y
Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFSGDG-SRLTVSNYLGEEIEY 340
>gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 374
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 122/345 (35%), Positives = 194/345 (56%), Gaps = 6/345 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ +TS +L IK E+ + +IS + TP +LINP++ NDPI +Q
Sbjct: 28 WQIANR-ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84
Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++
Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR +V+P R E + L E V++ H NHP E + E A+ + + G +L
Sbjct: 204 RIGSRELVVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGIND E + NLMR ++++IKPYYL D G HFR +E G +I+ L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
++SGL P + +DL GG GKV + + I + ++ N
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368
>gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53]
gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53]
Length = 361
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 177/349 (50%), Positives = 244/349 (69%), Gaps = 4/349 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL S +L L EQ+ + E+++ Y++A+T +A+LI+P +PNDPIARQ+IP +
Sbjct: 12 RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I ER DPIGD HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG K +
Sbjct: 72 ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + AA+ YI+ +IWEVI TGGDPL+LS +RL++V+ L I+HV+I+RFH+RVP
Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ +P RI+ +L+ LK G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+
Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++ L+ ++SGLC
Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311
Query: 306 QPFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPK 350
QP Y+LD+PGG+GK + + V Y + D+ H YPP
Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPPA 360
>gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 374
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 122/345 (35%), Positives = 192/345 (55%), Gaps = 6/345 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++T TS +L IK E+ + +IS + TP +LINP++ NDPI +Q
Sbjct: 28 WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84
Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++
Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR + +P R E + L E V++ H NHP E + E A+ + + G +L
Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGIND E + NLMR ++ +IKPYYL D G HFR +E G +I+ L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
++SGL P + +DL GG GKV + + I + ++ N
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368
>gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
Length = 354
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 132/337 (39%), Positives = 201/337 (59%), Gaps = 6/337 (1%)
Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
+ + + + +++K + + Y + + P LI N DPI RQ +P EL+
Sbjct: 19 ESIMEPDALPSSHPEKLKRVISRYPMRINPYYLGLIREKN--DPIYRQSMPDIRELDDKG 76
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
DP+ + HSP++G+ HRYPDR+LL + C VYCRFC R+ VG + +++ +
Sbjct: 77 AAP-DPLNEEGHSPVRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSI 133
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E + YI+ ++ +V+ +GGDPL+L RL ++L L I HV+I+R +RVP PQR
Sbjct: 134 EEGIDYIRAHREVRDVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQR 193
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
I PEL L++ P+Y+ +H NHP E + EA A +RLA+AGI L Q+VLLKG+NDDP
Sbjct: 194 ITPELAGLLQKF-HPLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDP 252
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
++ LMR + +R+KPYYL H D A GTSHFR ++ G I+ L+ SGLC P + +
Sbjct: 253 SVMQELMRKLLIIRVKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAI 312
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
DL GG GKV + ++ +GS +T++ + +P
Sbjct: 313 DLLGGGGKVPLLPDYLQGREDGSLLVTNYRGNAYRHP 349
>gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
Length = 423
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 5/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ H+ ++ + L + Q +IK + Y A++P A+L+ +DPI Q
Sbjct: 75 WQMSHR-ISDSGALAELFGFNEMQCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRLQS 133
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EELN DP+ + SP + RYPDR+++ + + C +YCR C RR +G
Sbjct: 134 VPSIEELNETGH--PDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNIG- 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + AAL YI++ +I +V+ TGGD L+LS ++ +L L IKHV+I R
Sbjct: 191 EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIKRL 250
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI PEL LK+ P+Y+ NHP E + E+ A LA AG++L +Q
Sbjct: 251 GTRAIVTLPQRITPELCDVLKKHP-PIYVNTQFNHPREVTPESKQACDMLAEAGVVLGNQ 309
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+N+DP ++ L + +++ ++PYY+ H GT HF ++EG I+ L+
Sbjct: 310 AVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLRGY 369
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK + + + N V +Y
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPCYVLGNNGDKIKLRTWENRVLEY 416
>gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
metalliredigens QYMF]
Length = 422
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 117/348 (33%), Positives = 190/348 (54%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL ++ ++ L + ++I++IK++ + +++P LI+ +N PI
Sbjct: 67 WQLSNR-ISDVDTLTKIIKLDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMA 125
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E+ + DP+ + +P I RYPDR+++ + + C +YCR C RR +G+
Sbjct: 126 IPHGYEIANTKGD-TDPMAEEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGT 184
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S + + ++ YI++ +I +V+ TGGD L LS+ L +L L I V +R
Sbjct: 185 -NDLHTSREVLQESIDYIRDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRL 243
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR + PQRI +LI LK+ P++I H NHP E +EE+ AA RL+NAGI L +Q
Sbjct: 244 GSRTLVTMPQRITDKLINILKKYP-PIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQ 302
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN++ ++ L ++ R++PYY+ H GTSHF ++++G +I+ L+
Sbjct: 303 AVLLNGINNNKFVMRLLNHELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGY 362
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG+ P YI++ PGG GK I + G+ S I V DYP
Sbjct: 363 TSGMAIPTYIINAPGGKGKTPILPQYLISRGSHSIKIRTWDGEVIDYP 410
>gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
Length = 378
Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ + S Q+L I K++ + +++S + TP +L+ + DP+ RQ
Sbjct: 28 WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86
Query: 61 IPQKEELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
P EE++ + DP + SP++GI HRYPDR+L ++ C VYCR C R+
Sbjct: 87 FPSFEEIDPDIQNNGSNDPFNEER-SPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S KD + + YI++ I EV+ +GGDPL L +K+L +L L+ IKHV I+
Sbjct: 146 I-YGERAKSKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDII 204
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR P+V+P R E + L E ++I H NHP E ++E A+ + + G +L
Sbjct: 205 RIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPVL 264
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGINDD I+ LMR+ + ++IKPYYL D G HFR I++G +I+ L+
Sbjct: 265 NQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYLR 324
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
++SGL P Y +DLP G GKV + I ++ + S ++ +
Sbjct: 325 GRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYEGEI 370
>gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter
uraniireducens Rf4]
gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4]
Length = 347
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 138/348 (39%), Positives = 207/348 (59%), Gaps = 9/348 (2%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + ++TS + L I E + + Y + +TP NLIN P DP+ RQ
Sbjct: 4 WQNILAASITSPEQLARRFGIDAE---PLLRVVQRYPMRITPYYLNLINE--PGDPLWRQ 58
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL ++EDP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 59 CVPDARELEDDL-QQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
G V AAL YI + +I +VI +GGDPL+L L+++L LR I H++I+R
Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+ P+RI L + LK P+YI H NHP E + E+ A +RLA+AGI L +
Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+ND+P ++ LM+ +++R+KPYY+H DL GT HFR +E+G +I+ SL+
Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P+Y++DL GG GKV + +K+VG + ++ + +Y
Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343
>gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
506]
Length = 385
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL +L A+L+ + + ++ Y++A+TP +A LI+P +P DPIARQF+P
Sbjct: 16 RTLRRLDELVEASLVAPD--PRLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ LPEE EDPIGD HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T
Sbjct: 74 EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + EAALAY+ ++WEV+ TGGDPL+ + +RL +++ L I HV+I+RFH+RVP
Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
I P+R+ P L+ L+ AG Y A+HANH E EA AA++RLA+AGI L+ QSVLL
Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDD + L+ L R VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL
Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG+GKV + ++ G + +TD+ VH Y
Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354
>gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
Length = 416
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+H+ +T + L + Q EI ++ Y A++P +L + NP DP+ Q
Sbjct: 71 WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL E EDP+ + SP I RYPDR+++ + ++C +YCR C RR +G
Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +D AALAY++E +I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P RI L+ L + P+Y+ NHP E + EA A+ RL +AG+IL +Q
Sbjct: 248 GTRVPVTLPARITDHLVNILAKYP-PLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKGIN+ P I+ L + +++R++PYY+ H GT HF +I+EG ++ L+
Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P G GK+ + + + V Y
Sbjct: 367 TSGLAVPTYIINAPKGGGKIPLLPQYLLSLNENKAVFRSWEGNVVHY 413
>gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 416
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 11/352 (3%)
Query: 1 MQLRHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q+ ++ L + + + + +A+TP + + R
Sbjct: 61 WQIDNRILDVDMVEKILGYS------RAGSMPLGKGLPMAVTPYYLGVAAVAGSAS-LRR 113
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
P E + E EDP+G+ H + GIVHRYPDR+L C YCR+C R +V
Sbjct: 114 CIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRSRLV 173
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + K ++A+AYI+ I +V+ +GGDPL L RL +L LR I HV+I+
Sbjct: 174 GRNGRKHDTKK-WKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHVEII 232
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R ++VP V PQRI PEL L++ P++I++H HP E + E + A + LA+AGI L
Sbjct: 233 RIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGIPLG 291
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
SQ+VLLKG+NDD + LM+ ++ R++PYYL+ D G++HFR +E+G +I+ L+
Sbjct: 292 SQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQGLR 351
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SG P Y++D PGG GK+ + + ++ ++ YP
Sbjct: 352 GHTSGYAVPSYVIDAPGGGGKIPLLPEYYVGRDERGVILRNYEGNIYTYPDP 403
>gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
Length = 367
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q R++ + ++L + E+ IK Y A+TP A+L++ +P+ PI +Q I
Sbjct: 13 QFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQAI 71
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I DP+GD + IVH+YPDRI++ + CPVYCR C R+
Sbjct: 72 PSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTDL 131
Query: 122 KGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GT + E YI+ +I +V+ TGGDPL S +RL+ +LK LR I HV+I+
Sbjct: 132 DGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEII 191
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
RF SR P++ PQRI E + L++ P+++ H NHP E ++E+ A++ L G+ +
Sbjct: 192 RFGSRYPVLLPQRITKEFCEMLEKY-HPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPVQ 250
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLLKGINDD + + L++ +++R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 251 NQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGLV 310
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+G P YI+ GK+ I + + + + + + P
Sbjct: 311 GHTTGFATPNYIITTIN--GKIPIPLETVLEHSDEGLILKSYEDKETVIP 358
>gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 416
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 193/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R + + +DL + +E+ E++++ A TP +L+NP +PN P+ RQ
Sbjct: 70 WQVRSR-INKVEDLIELLELNEEEAAEVRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQA 128
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EEL P ++DP+G+ SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 129 IPATEELLN-PVGKDDPMGEQYTSPAPAITRRYPDRLIINVTNQCGMYCRHCQRRRNIG- 186
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + +D +AAL Y++ +I +V+ TGGD L+L+ + + +L L I HV+I R
Sbjct: 187 EVDRMTAREDLQAALDYVRNHPEIRDVLLTGGDALMLNEEIIDWLLTELDNIPHVEIKRL 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR + P R+ EL L++ PVYI H N+P E + A +L AG+ L +Q
Sbjct: 247 GSRTLVTMPMRVTDELCAVLEKHS-PVYINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL G+NDDP ++ L +++ I+PYY+ H GT+HFR +E G +I+ L+ +
Sbjct: 306 AVLLAGVNDDPHVMKKLNHMLLQVMIRPYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQ 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P +I++ P GYGK + + G I N V +Y
Sbjct: 366 TSGMAIPTFIVNAPEGYGKTPMLPEYLISSGRDKIFIRTWENRVFEY 412
>gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 179/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R TL SA DL L ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P
Sbjct: 6 RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K
Sbjct: 66 ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
LS + AALAYI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+R H+R
Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+ DPQRI L+ LK G ++A+HANHP E + +A +RL +AGI L+SQSVL
Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351
LCQP Y+LD+PGGYGK + + Y + D+ H YPP +
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363
>gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 365
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 121/343 (35%), Positives = 194/343 (56%), Gaps = 5/343 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59
QL+++ +T+ ++L + E+I ++ Y A+TP +L+ NP + DPI Q
Sbjct: 15 WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E++ ++ P N + +KG+ HRY DR L+ + C VYCR C R+ +
Sbjct: 74 IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + YI+ I +V+ +GGDPL L ++RL+ +L L I+H++++R
Sbjct: 133 KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVIR 192
Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
SRVP+ PQR+ + EL+ L K ++I H NHP E +E+A AI L AG+ +
Sbjct: 193 IGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPVN 251
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+NDD E + LMR + +++KP YL H D GT HFR +IE+G +I+ ++
Sbjct: 252 NQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMR 311
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
++SG P Y +DLPGG GKV + KK+ +G Y
Sbjct: 312 GRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFD 354
>gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
Length = 341
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 170/347 (48%), Positives = 233/347 (67%), Gaps = 10/347 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L + +DL A L ++ + ++ Y++A+TP +A L +ARQF+P
Sbjct: 3 RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGLSET----CEGVARQFVPTA 58
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL PEER DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG +
Sbjct: 59 AELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVR 118
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
LS +AA+AY+ + +IWEVI TGGDPLILS +RL + L I HV+++RFH+RV
Sbjct: 119 PLSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRV 178
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P VDP ++ +++ LK +GK V++A+HANHP E + A+AA +R+ +AGI ++SQ+VLL
Sbjct: 179 PAVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLL 238
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KGINDDP++L LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL
Sbjct: 239 KGINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGL 298
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
QP Y+LD+PGG+GK + + + D H YPP++
Sbjct: 299 AQPTYVLDIPGGHGKAPVGPAYVHGGE-----VEDPQGRRHAYPPEA 340
>gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
nigrificans DSM 574]
Length = 422
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 121/348 (34%), Positives = 187/348 (53%), Gaps = 4/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + Q L + E ++ I ++ HY A++P L+ PI +Q
Sbjct: 74 WQMANR-IKDVQVLGQLMNLSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQA 132
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +E+ EDP+G+ SP I RYPDR+++ + + C +YCR C RR +G
Sbjct: 133 IPSIKEIEDHSG-VEDPMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ K +AAL YI+E +I +V+ TGGD L+L K++ +L L I HV+I R
Sbjct: 191 EVDVHKPRKVLQAALDYIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRI 250
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI P L L++ P+YI NHP E + EA A RL AG++L +Q
Sbjct: 251 GTRTPVTMPQRITPTLCAILEKHP-PIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQ 309
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLK IN+ P+++ L ++ +++R++PYY+ H GT HF ++EEG I+ L+
Sbjct: 310 AVLLKDINNHPDVMKRLNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGY 369
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SGL P YI++ P GYGK I + + + V YP
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPILPQYVLDRKDNYITLRTWEKRVIRYP 417
>gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
Length = 349
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 165/347 (47%), Positives = 236/347 (68%), Gaps = 2/347 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ T A +L A +I +Q+ + ++ +Y IAL +A LI+ +P DPI Q++P
Sbjct: 1 MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EELN P E +DPIGD HSP+ GIVHRYPDR+LLK+ CPVYCRFCFRRE VG +K
Sbjct: 61 SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK 120
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G LS + +AA AYI ++ +I+EVI TGGDP+ILS R + + L I HV+++R+HS
Sbjct: 121 GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS 180
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+ P+R+ PE + ++ + K V++A+HANH EF+ EA+AAI RL+ AGI L+SQSV
Sbjct: 181 RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV 240
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+ND E LA+LMR F+ + IKPYYLH D A GTSHFR+ +EEGQ +V L++++S
Sbjct: 241 LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS 300
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
GL P Y+ D+PGG K ++ +I++ + ++ + + PP
Sbjct: 301 GLATPTYVADIPGGVSKAVMNLPDIERR-DDAFVLRGRDGETYL-PP 345
>gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5]
gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L + D++++++ Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE
Sbjct: 14 TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LP ER+DPIGD HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG K L
Sbjct: 74 LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S T AAL YI+ +IWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+R+P+
Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL++ L+ GK V++A+HANHP E + A AA +R+ +AGI ++SQSVLL G
Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGK + + + + Y ++D+ VH YPPK +
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363
>gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
trichosporium OB3b]
Length = 376
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 172/346 (49%), Positives = 229/346 (66%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL S DL A L+ E ++ + YS+A+T A L++ +P DPIARQF+P E
Sbjct: 22 TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ LPEE DPIGD+ SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG KG L
Sbjct: 82 LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S AL YI E+ +I+EVI TGGDPL LS +RL + + LR I HV +LR H+R P
Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P + PE + L +GK VY+A+H NH E + A AI+R+ AG+ L+Q+VLL+G
Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR LR+KPYYLHHPDLA GT+HFRL+IEEG+ + L +ISG+
Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGGYGKV + + +I++ G + + D H YP + +
Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367
>gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 128/344 (37%), Positives = 181/344 (52%), Gaps = 8/344 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+LTS +L + E ++ + + Y + + P +LI P DP+ RQ IP E
Sbjct: 22 SLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLI--EQPGDPLWRQAIPDPRE 76
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG +
Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ +AAL Y+ I +V+ +GGDPL+L+ L +L LR I ++I+R SRVP
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMGSRVPC 194
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL
Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P LD PGG GK+ + + + G + + +YP
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFSSYTGQPGEYPNP 357
>gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 417
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 115/346 (33%), Positives = 187/346 (54%), Gaps = 5/346 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+R++ + L I + I ++ Y A++P +L+ N+P+ Q
Sbjct: 71 WHMRNR-INDVSVLTKILDISTFESRGITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQA 129
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL LP+ DP+ + SP I RYPDR+++ + + C ++CR C RR +G
Sbjct: 130 VPDPREL--LPKGELDPMDEAGTSPAPRITRRYPDRLIINVTNQCAMFCRHCQRRRNIG- 186
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S +D AAL YI +I +V+ TGGD L+LS + L +L L I HV+I R
Sbjct: 187 EIDQHASREDVRAALHYISGNPEIRDVLITGGDALLLSDRTLDWILTELDRIPHVEIKRI 246
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R+P+ PQR+ PEL + + + P+Y+ NHP E + EA A L AG +L +Q
Sbjct: 247 GTRIPVTLPQRVTPELCEVISKHP-PIYVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQ 305
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL+GIND P ++ L + +R++PYY+ HP GTSH ++IE+G +I+ +L+
Sbjct: 306 AVLLRGINDCPVVMKKLNHELLRIRVRPYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGH 365
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SGL P YI++ PGG+GK+ + + K+ + + +
Sbjct: 366 TSGLAVPTYIINAPGGFGKIPLMPQYLLKLEPDKAVVRTWEGRIVE 411
>gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium
saccharolyticum WM1]
Length = 419
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL HK ++ L + + + IK++ Y A++P +L +PH+ DPI
Sbjct: 64 WQLTHK-ISDINTLSEIIPLNETEKMRIKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLS 122
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EL P DP+G+ +P I RYPDR+++ + + C +YCR C RR +G
Sbjct: 123 IPTHKELED-PCLDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 180
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ S + ++ YI+E +I +V+ TGGD L LS + L+ ++K L+ I H+ +R
Sbjct: 181 EEDVHRSREMILESIEYIRENEEIRDVLITGGDALCLSDEDLEWMIKQLKEISHIDYIRL 240
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R + PQRI +L L++ P+YI H NHP E ++ + AA +LA++GI+L +Q
Sbjct: 241 GTRSLVTMPQRITDQLCSMLRKY-HPIYINTHFNHPIEITKASKAACEKLADSGIVLGNQ 299
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN++ I+ L ++ R++PYY+ H GT+HF +IE+G +I+ L+
Sbjct: 300 AVLLNGINNNKYIMRVLNHELLKCRVRPYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGY 359
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SG+ P +I++ P G GK I + I G G + + Y
Sbjct: 360 TSGMAIPTFIVNAPKGQGKTPIFPNYIVSRGPGYVQLRTWEGNMVKY 406
>gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54]
gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 353
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 7/345 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
++TS L+ + + I ++ + + + +LI DPI +Q IP
Sbjct: 11 SITSPSQLHLFKKKHQNLNETISNKVIPDFPMRINSYFLSLI--EEVGDPIWKQCIPDPR 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E EDP+G+ SP+ +VH+YPDR LL + + C VYCRFC R+ MVG+++
Sbjct: 69 EEEDFIC-MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRFCTRKRMVGTER-MH 126
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ ++ +A Y++ I EV+ +GGDPL+L+ ++ +L L+ I + ++R SRVP
Sbjct: 127 ITEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQSIPSIDVIRIGSRVP 186
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
P RI PEL+ L++ P+YI H NHP E + EA A + LA+ GI L Q+VLLK
Sbjct: 187 CTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLADGGIPLGCQTVLLK 245
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L +++R+KPYYL DL GT+HFR T + G I+ L ISG+
Sbjct: 246 GVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGIDIMRQLYGHISGMA 305
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P LD PGG GK+ + + IK+ G ++ + YP
Sbjct: 306 IPRLALDAPGGKGKIPLSPNYIKESGEN-LIFENYLGEICSYPEA 349
>gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
Fw109-5]
Length = 385
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 3/350 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q R+ L +A++L + +E+ + + +A+TP A+L++P +P+ PI Q
Sbjct: 20 WQHRN-ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQA 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP E P + DPIG+ H P + IVH+Y DR+L + C VYCR C RR +
Sbjct: 79 IPSAREAEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFG 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
G E +AY++ ++ +VI +GGDPL+LS +RL +L LR I HVQ+LR
Sbjct: 139 ADGG-FDRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRV 197
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ P R+ P L L+ P+++ H NHP E + +A AA L + G+ + +Q
Sbjct: 198 ATRAPVTCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQ 256
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N +L +L + R++PYYLH DLA GT+H R +E G I+ +++ +
Sbjct: 257 SVLLRGVNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGR 316
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
SGL P +DLP G GK+ + G++ + H + YP
Sbjct: 317 TSGLAIPHLAVDLPDGGGKITLQPSYQLGREGGAHALRSHRGGRYLYPDP 366
>gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
Length = 378
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 116/334 (34%), Positives = 182/334 (54%), Gaps = 3/334 (0%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q
Sbjct: 47 WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR +
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R
Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
+GL P +DLPGG GKV + + + G
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHE 377
>gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
43827]
Length = 381
Score = 417 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 8/345 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+RH+ +T+ L + ++ I + Y ++TP A+L++P +P PI +Q
Sbjct: 25 WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + EL P+ DP+GD + +VH+YPDR++L + CPVYCR C R+
Sbjct: 84 VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143
Query: 121 QKGTVLSSKD---TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
+GT + E L YI+E +I +V+ TGGDPL ++L++++ LR I V+I
Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P++ PQR+ E + L PV++ H NHP E + EA AA+ RL G+ +
Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLLKGINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
+ ++G P Y+L GK+ I + V +G + ++
Sbjct: 323 QGHMTGFGVPQYVLTT--RIGKIPISRPYHEAVEDG-LALRNYRG 364
>gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 129/344 (37%), Positives = 180/344 (52%), Gaps = 8/344 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+LTS +L + E ++ + Y + + P +LI P DP+ RQ IP E
Sbjct: 22 SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG +
Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R SRVP
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL
Sbjct: 254 VNDDAATIKGLMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P LD PGG GK+ + + + G + +YP
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357
>gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 365
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 128/344 (37%), Positives = 179/344 (52%), Gaps = 8/344 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+LTS +L + E ++ + Y + + P +LI P DP+ RQ IP E
Sbjct: 22 SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG +
Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R SRVP
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PQR+ L LK P+Y+ H NHP E + EA A RLA GI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL
Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
P LD PGG GK+ + + + G + +YP
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357
>gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380]
gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 347
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 136/349 (38%), Positives = 203/349 (58%), Gaps = 10/349 (2%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + ++T+ L + E+ + Y + +TP +LI P D I RQ
Sbjct: 4 WQRQLIDSVTAPAGLAERFGTD---MSELDAVVQRYPMRITPYYLDLIEK--PGDAIWRQ 58
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P + EL E+ DP+ + SP+ +VHRYPDR+LL C VYCRFC R+ VG
Sbjct: 59 CVPDRRELLPCQED-ADPLAEERLSPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVG 117
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+S + + A+ Y+ Q+ +VI +GGDPL+L RL+ +L LR I HV+I+R
Sbjct: 118 C-AAMGVSDRHLDEAIDYVARTEQVRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIR 176
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
SRVP+ PQRI EL L+ P+Y+ H NHP E + +A A RLA+AG+ L +
Sbjct: 177 IGSRVPVTLPQRITEELCAMLRRY-HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGN 235
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND P ++ L++ +++R++PYYLHH DLAAGT HFR IE G IVA+L+
Sbjct: 236 QTVLLRGVNDTPAVMRQLVKGLLKMRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRG 295
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
ISGL P Y++D PGG GK+ + + K+G+ + + + ++P
Sbjct: 296 PISGLAVPHYVIDSPGGKGKIPLLPEYLVKLGDTAL-LRTPSGEMIEFP 343
>gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium
cellulovorans 743B]
Length = 424
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 121/348 (34%), Positives = 189/348 (54%), Gaps = 6/348 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ ++ + L + +E+ + IK++ Y ++P A+LI+ N N P+ Q
Sbjct: 67 WQISNR-ISDIKILSKIIKLSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQC 124
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P ELN E DP+G+ SP I RYPDR+++ + ++C +CR C RR +G
Sbjct: 125 VPTLFELND--EGTLDPMGEEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGI 182
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
S D E ++ YI+ +I +V+ TGG+PL+LS + +L L IK ++ +R
Sbjct: 183 -VDKHQSISDLEESIEYIRNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRI 241
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RV PQRI L+ LK+ P+YI NHP E + EA A +LAN GI L +Q
Sbjct: 242 GTRVLATLPQRITANLLSILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQ 300
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLL GIN+D ++ L + ++ RIKPYY+ H GT+HF +I++G +I+ L+
Sbjct: 301 TVLLNGINNDKYVMRLLNQELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGY 360
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
SG+ P YI++ P G GK I I G + I + DYP
Sbjct: 361 TSGMAIPTYIINAPNGNGKTPILPQYIISRGKNNVKIRTWEGKIFDYP 408
>gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 342
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 5/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + E++ +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337
>gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
Length = 402
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 182/353 (51%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH LT+A D + + + H +A TP A+L++ +P PI Q
Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++
Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + + YP
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 408
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 123/344 (35%), Positives = 190/344 (55%), Gaps = 5/344 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ ++ + L Q+++IK++ Y A++P +L N N PI +QF
Sbjct: 63 WQIKNR-FSNVEQLQKILNTCP-QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQF 120
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EL DP+ + N SP K +V RYPDR+++K+ + C +CR C R+ +G
Sbjct: 121 IPSILELQDELG-LSDPVDEKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGK 179
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
Q SS + E A+ YI++ +I +V+ TGGD L+LS K+L +L L I HV+I R
Sbjct: 180 Q-DLHTSSGNIEKAVDYIKKNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRI 238
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+RVP+ P RI +L L P+YI NHP E + EA A ++L AG++L +Q
Sbjct: 239 GTRVPVTLPMRITEKLCGILGNHP-PLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQ 297
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLK IND+P I+ L + +++R++PYYL H GT HF + G +I+ L+
Sbjct: 298 SVLLKEINDNPHIIKKLNQELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGY 357
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
SGL P YI+++ GG GKV I + + + N +
Sbjct: 358 TSGLAIPSYIVNVNGGLGKVPIQPQYLFFNEHNEITLRTWENKL 401
>gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
At-22]
Length = 342
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + E++ +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337
>gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342]
gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342]
gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
Length = 342
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL + +TS +L + E++ +E + + + + NPNDP+ RQ
Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYA 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
ISG P ++ G K +D
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337
>gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
Length = 345
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64
K L S DL A L+ E D ++ +++ Y++ALTP + L +P DP+ Q++P
Sbjct: 2 KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + PEEREDPIGD SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG G
Sbjct: 62 AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L++++ +AALAYI++ Q+WEV+ TGGDPL+LS +RL+ +++ L + HV ++R HSR+
Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P DP R+ PEL++ L +IA+H NH E + AA++RL AGI L+ Q+VLL
Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KGIND L L R V R+KPYYLHHPDLAAGTSHFR T+ EG+ +V L+ K+SGL
Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
CQP Y+LD+PGG+GK I++ G Y +TD VHDY
Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343
>gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
Length = 342
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE
Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L+ ++ L I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ L E V + H NH E + +++L AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LA L + + PYYLH D G +HF ++ +E + I+ L ++SG
Sbjct: 260 VNDNAATLAALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18]
gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 368
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 177/349 (50%), Positives = 238/349 (68%), Gaps = 4/349 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +L L+ +Q+ + ++ Y++A+T +A LI+P +P+DPIARQ+IP E
Sbjct: 20 TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG K L
Sbjct: 80 LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AAL YI+ +IWEVI TGGDPL+LS +RL + + L I HV+I+R HSRVP+
Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+P RI+ EL+ L+ +G V++A+HANHP E S A AA +R+ +AGI ++SQSVLL+G
Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ L+ ++SGLCQ
Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319
Query: 307 PFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPKS 351
P Y+LD+PGGYGK + + + + + Y +TD+ H YPP S
Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368
>gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
49814]
Length = 348
Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
KTL SAQD N + E I +S Y++A+T +A+ + + +DP+ RQF+P +
Sbjct: 3 KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL LPEEREDPIGD ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG K +
Sbjct: 63 ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + +AA+ YI +IWEVI TGGDP++LS +R +++ + L I HV+I+R+H+R+P
Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P + E Q +K + K V++A+HANH EFS A A + L +AGI ++SQSVLLK
Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V L+ +SGLC
Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
P Y++D+PGG K + +++ +G + YPP
Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345
>gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
reducens MI-1]
gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1]
Length = 422
Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ + + + + + + I+++ Y A++P L P+ Q
Sbjct: 74 WQMANR-IKDVKVISQLIDLSPAEKEAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQA 132
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EE+ EDP+G+ SP++G+ RYPDR+++ + + C +YCR C RR +G
Sbjct: 133 IPCIEEVKDR-YGVEDPMGEEYTSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ S K E AL YI+E +I +V+ TGGD L+LS ++++ +L L I HV+I R
Sbjct: 191 EIDVHKSRKVLEGALQYIRENKEIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRL 250
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ PQRI PEL + L+ P+YI NHP E + EA A L AG++L +Q
Sbjct: 251 GTRTPVTMPQRITPELCKILENHP-PIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQ 309
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLK IN+ P+++ L ++ + +R++PYY+ H GT HF +++G I+ L+
Sbjct: 310 AVLLKNINNQPDVMKRLNQSLLTIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGY 369
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
SGL P YI++ P GYGK + I + N + + Y
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPQYIIENKNDQVTLRTWEKRIIPY 416
>gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 354
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL+++ +T DL + E+ D + + + A+TP I+ +P+ PI +Q
Sbjct: 8 WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P+ EL E +DP+ + H P+KG+ HRYPDR + + HVC VYCRFC R+ V +
Sbjct: 67 LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T + + E AL Y + ++++ EVI +GGDPL LS L +L L+ I H+ +R
Sbjct: 127 PEET-PNRSEWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLS 239
H+R P+ P R+ L + P+Y+ H NHP E S+E + + + + +
Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL++L + + IKPYYLH D G+S F + +E+G +I L+
Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
SG+ P Y+ DL GG GKV + ++K + Y ++ ++
Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNYLGDEYE 351
>gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1]
gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1]
Length = 342
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLSAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I E++ ++ +++ + + NPNDP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLNIDADEKLLAGRDAKRLFALRVPRSFIARMEKGNPNDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + H NH E + A++ L NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTTLRNAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L ++SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTRVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185]
gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185]
Length = 342
Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 402
Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH LT+A D + + + H +A TP A+L++ +P PI Q
Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + + YP
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032]
gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis
z3032]
Length = 342
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE
Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI +++ E+IF+GGDPL+ L+ ++ + I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ L E V + H NH E + A +++L AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ L L + + PYYLH D G +HF ++ +E + I+ L ++SG
Sbjct: 260 VNDNAATLTALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
Length = 344
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 118/341 (34%), Positives = 194/341 (56%), Gaps = 10/341 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T+ ++L I E + + Y + +T LI P D I RQ +P E
Sbjct: 11 SITTPEELAELLDIDPEPLAPL---VRRYPLRITRRYLGLI--GKPGDAIWRQCVPDPCE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L+ ++ DP+ + SP+ G++HRYPDR++ + + C VYCRFC R+ VG
Sbjct: 66 LDD--DQLSDPLDEERLSPVPGVIHRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGSN 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ A+ YI I +VI +GGDPL+L +RL+ +L LR I HV+++R +R P+
Sbjct: 124 GRSG-DDAVRYIAATPAIRDVILSGGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPV 182
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+RI L + LK P+Y+ H NHP E + EA A +RLA+ GI L +Q+VLL G
Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITPEATKACARLADTGIPLGNQTVLLAG 241
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+P I+ LM+ + +R++PYY+H DL GT HFR + G I+ +L+ SG+
Sbjct: 242 VNDEPAIMTLLMQRLLAIRVRPYYIHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMAT 301
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P++++D GG GK+ + +++ G+ ++ + ++ + +Y
Sbjct: 302 PYFVIDAAGGKGKIPLLPDAVERRGD-TWLLRNYRGEIVEY 341
>gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197]
gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718]
gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai]
gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli
O157:H7 str. EC4024]
gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966]
gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli]
gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli]
gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212]
gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101]
gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89]
gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687]
gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA
5905]
gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61]
gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125]
gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044]
Length = 342
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
Length = 342
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLQLDTDENLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYTENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L+ +L L I HV+ LR HSR+P+
Sbjct: 140 NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLEDIGHVKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E + A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKLRAAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LA+L + + PYYLH D G +HF +T +E ++I+ L ISG
Sbjct: 260 VNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLISGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K ID
Sbjct: 320 PKLAREIGGEPSKTPIDLQ 338
>gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617]
gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617]
Length = 320
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 1 MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 61 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 178 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 237
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316
>gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400]
Length = 353
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 10/341 (2%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+A ++ I Q + + Y + +TP L+ P DPI RQ IP E
Sbjct: 11 AVTTADEITERFGIDAGQ---LAPVIRRYPMRITPGYLRLV--EAPGDPIWRQCIPDPAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L +++ DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG
Sbjct: 66 LCD--DQQSDPLHEERLSPVPGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGCMTSRHC 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
L YI E I +VI +GGDPL+L +RL+++L L I HV+++R +R P+
Sbjct: 124 -EDPFGEPLRYIAETPAIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPV 182
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P+RI L + LK P+Y+ H NHP E + EA A +RLA+AGI L +QSVLL
Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLAD 241
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP ++ LM+ + +R++PYY+H DL GT HFR + G +I+ +L+ SG+
Sbjct: 242 VNDDPAVMTRLMQLLLSIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMAT 301
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++D PGG GK+ + I + G+ + + + +Y
Sbjct: 302 PHYVIDAPGGKGKIPLLPDCISRRGDL-WLLRTYTGETIEY 341
>gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1]
gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+TS +L I ++ + +E +++ + + NPNDP+ +Q + K+E
Sbjct: 23 ITSPDELLRLLNIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + +S + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVTAPGFSTDPL-EEQNSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L+ + + + H NH E E +A+ RL NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLVSRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA+L + + PYYLH D G +HF ++ EE ++IV L +SG
Sbjct: 260 VNDNAQTLADLSNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
DSM 2379]
gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
Length = 346
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 6/322 (1%)
Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
E ++ Y ++P A LI D I +Q IP EL+ + DP+ ++ SP
Sbjct: 22 AEFTSVAASYPFRVSPSYAKLIRREG--DAIWKQCIPDLRELDD-AGQCPDPLAEHLLSP 78
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ G++HRYPDR++L + + CPVYCRFC R+ VG + + ++ + A+ YI I
Sbjct: 79 VPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMDYIAANPAIR 137
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++I +GGDPL+L L +L+ LR I HV I+R +RVP+ P+R+ PEL LK
Sbjct: 138 DIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRF-H 196
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
P+YI H NHP E + + A LA+AGI L +Q+VLL+G+ND + + +L + LR
Sbjct: 197 PLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRSLQTGLLSLR 256
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYY+H DL GT+HFR I G +I+ L+ +SG+ P Y++DLP G GKV I
Sbjct: 257 VRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPD 316
Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
++++ G+ + + + Y
Sbjct: 317 DVERQGDL-LILRTYQGEMVRY 337
>gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012]
gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012]
gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905]
gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
Length = 342
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 103/323 (31%), Positives = 169/323 (52%), Gaps = 4/323 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + +E +++ + A + P + NDP+ RQ + EE
Sbjct: 23 ITDPDELLQLLSLNTHPDLPQGREARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG
Sbjct: 260 INDNADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329
P ++ G K +D H ++
Sbjct: 320 PRLTREVGGKPSKTPLDLHLMQS 342
>gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073]
gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1]
gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1]
gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073]
gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972]
gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1]
gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1]
gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972]
gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1]
Length = 342
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E+ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1]
gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101]
gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280]
gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15]
gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1]
gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101]
gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86]
gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605]
gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280]
Length = 342
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
568]
Length = 342
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + +E +++ + + P + NDP+ RQ + EE
Sbjct: 23 ITDPDELLQLLSLNTHPELPQGREARRLFALRVPRSFVARMQPGDANDPLLRQVLTASEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I+H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIEHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L KISG
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARTIMQALLGKISGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D H
Sbjct: 320 PRLTREVGGKPSKTPLDLH 338
>gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 402
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q RH L +A D + + + H +A TP A+LI+ +P P+ Q
Sbjct: 20 WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S
Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+R P+ +P R+ E + P+++ H NHP E + EA A RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
SGL P +DLPGG GKV + + G + + + + YP
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370
>gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89]
gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536]
gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11]
gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88]
gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1]
gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206]
gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89]
gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia
coli 536]
gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1]
gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11]
gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88]
gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82]
gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034]
gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1]
gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146]
gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C]
gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3]
gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3]
gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252]
gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263]
gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1]
gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a]
gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRMPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863]
gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v]
Length = 342
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509]
Length = 342
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39]
gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39]
Length = 342
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVFTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354]
gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1]
gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143]
gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026]
gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042]
gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354]
gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1]
gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143]
Length = 342
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1]
gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2]
Length = 342
Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75]
gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75]
Length = 342
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLTGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr.
W3110]
gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952]
gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B]
gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1]
gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK
gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655]
gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
coli str. K-12 substr. MG1655]
gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr.
W3110]
gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952]
gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1]
gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1]
gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1]
gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11]
gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482]
Length = 342
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E+ + + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++C + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
Length = 342
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 103/322 (31%), Positives = 171/322 (53%), Gaps = 4/322 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + ++ + ++ +++ + A + P + NDP+ RQ + KEE
Sbjct: 23 ITNPDELLRLLSLSTHPELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI PEL + L + V + H NH E E AA+++L AG+ LL+QSVL++
Sbjct: 200 VIPARITPELCRWLSASRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRR 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTHNIK 328
P ++ G K +D H I+
Sbjct: 320 PRLTREVGGKPSKTPLDLHLIQ 341
>gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 342
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L +AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469]
gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253]
gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227]
Length = 342
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
Length = 373
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 132/348 (37%), Positives = 192/348 (55%), Gaps = 9/348 (2%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L +T + L +A I ++ ++ + HY + ++ LI H P+ +Q +P
Sbjct: 32 LSSTFITRPEQLAHALAIP---LEPLQAVHAHYPLRISAYYLQLIKQHGL--PLWKQAVP 86
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ELN DP+ + N SP+ +VH+YPDR L + C +YCRFC R+ VG +
Sbjct: 87 DLKELNDSSG-LVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKVG-KP 144
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V++ + A L Y+ I +V+ +GGDP +L RL+++LK LR I V +R +
Sbjct: 145 DMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTIRIGT 204
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP P R+ L LK+ P+YI H NHP E + EA A RLA+AGI L Q+V
Sbjct: 205 RVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLGCQTV 263
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+ND PE + LMR + +R+KPYYL DL GTSHFR TIE G I+ L +S
Sbjct: 264 LLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLIGHVS 323
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
G+ P Y LD PGG GK+ + H I +G + T + ++ YP +
Sbjct: 324 GMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYPNE 370
>gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1]
gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606]
gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50]
gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1]
gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1]
gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)]
gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606]
gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)]
gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1]
gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489]
gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A]
gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS]
gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A]
gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22]
gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171]
gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11]
gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989]
gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9]
gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088]
gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1]
gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7]
gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1]
gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1]
gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1]
gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1]
gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7]
gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9]
gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS]
gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A]
gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A]
gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22]
gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171]
gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989]
gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1]
gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368]
gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009]
gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128]
gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088]
gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1]
gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1]
gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7]
gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1]
gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1]
gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1]
gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7]
gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W]
gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1]
gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B]
gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14]
gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68]
gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357]
gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120]
gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3]
gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167]
gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271]
gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591]
gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9]
gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019]
gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019]
Length = 342
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180]
gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272]
Length = 320
Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 1 MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 61 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316
>gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046]
gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 342
Score = 407 bits (1048), Expect = e-111, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DPI RQ + ++E
Sbjct: 23 VTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227]
Length = 342
Score = 407 bits (1048), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGKPSKTPLDLQ 338
>gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G]
Length = 320
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DPI RQ + ++E
Sbjct: 1 MTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 60
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 61 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316
>gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 342
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
43380]
Length = 335
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P NP+DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPDLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FITAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWLLDELESIPHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E+ V + H NH E ++ ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRDSMAQLKRAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E+LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLAREIGGQPSKTPLDL 329
>gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933]
gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 342
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDP + L +L L I H++ R HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQLEAIPHIKRXRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
Length = 349
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 159/342 (46%), Positives = 218/342 (63%), Gaps = 8/342 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI +P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLI--TSPDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
L P Y+LD+PGGYGKV + ++ G + D H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ----GPQQVKDPKGETH 344
>gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + I E++ ++ +++ + + NP+DP+ RQ + +EE
Sbjct: 23 VTDPDELLHLLNIDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + A+ YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+S L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSLRAAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + +++ + A+ + +P DP+ Q I +E
Sbjct: 23 ITDPNELLQLLGLDSHPELTAGSDARRLFALRVPRAFASRMQKGDPQDPLLLQVITASQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FVDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI+E+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 140 NKRNWQQALEYIREQPELDEIIFSGGDPLMAKDSELDWLIGELEQIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L ++ V + H NH E + A+ L +AG+ LL+QSVLL+
Sbjct: 200 VIPSRITRTLCQRLAQSRLQVLMVTHINHAQEIDDALRDALQLLKSAGVTLLNQSVLLRN 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD LA L + + PYYLH D G +HF ++ ++ + I+ L +SG
Sbjct: 260 INDDATTLATLSNALFDAGVLPYYLHVLDKVQGAAHFYVSDDDARAIMRELLANVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
Length = 350
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 159/347 (45%), Positives = 211/347 (60%), Gaps = 5/347 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
LT +DL L+ Q+ ++ +++ + I +TP + I P DP+A QF+P E
Sbjct: 8 ALTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAI--TAPADPVAAQFVPSAAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L PEER DPIGD HSP G+ HRYPDR +L + C VYCRFCFRRE VG + L
Sbjct: 66 LITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVG--ETGPL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
D AL YI + E+I TGGDPL LS +RL+ VL L I H+ LRFHSRVP+
Sbjct: 124 PEPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPV 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI P L+ L+ V++ +H NH E + A AA++RL +AG+ LLSQSVLLKG
Sbjct: 184 VAPERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L +L R + R+KPYYLHH DLA GT HFR TI G+ ++A L+ +SG
Sbjct: 244 VNDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAI 303
Query: 307 PFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYPPKSS 352
P Y+LD+PGG+GKV I ++ G + +TD VHDY +S
Sbjct: 304 PTYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDYADPAS 350
>gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
8739]
Length = 342
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPEDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 342
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5]
gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5]
Length = 342
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NPNDP+ RQ I ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03]
gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07]
gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22]
gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26]
gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32]
gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12]
Length = 349
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 159/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI P+DPI Q +P
Sbjct: 11 RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLI--TAPDDPIGVQVVPS 68
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G
Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
L P Y+LD+PGGYGKV + ++ G + D H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPDYVQ----GPKQVKDPKGTTH 344
>gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 342
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 342
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
WPP163]
Length = 348
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + + +++ + A + +P+DP+ Q + +EE
Sbjct: 23 ITDPDELLQLLALNDHAKLRQGTDARRLFALRVPRAFAARMQKGDPDDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+
Sbjct: 140 NKANWRQALDYIRQHPELNEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L + V + H NHP E + +++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E LA L + I PYYLH D G +HF + E + +V +L +K+SG
Sbjct: 260 VNDSAETLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGEASKTPLDL 337
>gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
Length = 342
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 342
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017]
gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T]
gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671]
gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70]
gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71]
gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71]
gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218]
gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ E++ ++ + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEANEKLRAGQDARHLFALRVPRAFIARMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+P+
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L G+ LL+QSVLL+G
Sbjct: 200 VIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 342
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
vulgare Y25]
Length = 343
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
LI ++ ++ + + +TP + I + D + QF+P + ELN+LP E DP
Sbjct: 4 GLISPADAAALRPVTETFRMRITPQMRTAITRAD--DGVGLQFVPDRRELNVLPSELTDP 61
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
IGD HSP KGI HRYPDR++ + VC VYCRFCFRRE+VG VL + D AAL Y
Sbjct: 62 IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I+ I EVI TGGDPL LS +RL ++ L I HV ++R H+RVP+V P RI PE+I
Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGI 247
L G ++ +H NHP EF EA +AA+ L AG+ LLSQSVLL+G+
Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND +L +L T + L +KPYYLHH DLA GTSH+R TI G+ ++ +L+ +ISG P
Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
Y+LD+PGG+GKV I +G + +TD + H Y
Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339
>gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 351
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 4/341 (1%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+TL + +DL A L+ + ++ +++ Y+ A+ P A LI +P+DPI Q IP
Sbjct: 11 RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALI--EHPDDPIGLQVIPDPA 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ EER DPIGD+ SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G V
Sbjct: 69 ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI +GGDP++LS +R+ +++ L + HV +R H+RVP
Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP+R+ +++ L + +++ IHANH E + +A AI R+ I +++QSVLL+
Sbjct: 188 VADPERVTADMMAAL-DTTCSLWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND P+ L +L+R V R+KPYYLH D A GTS FR+ I EGQ+++A+L+ +++GL
Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
P Y+LD+PGG+GKV I + V + D H
Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPHR 347
>gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 337
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 18 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 77
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 78 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 134
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 135 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 194
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 195 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 254
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 255 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 314
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 315 PRLAREIGGEPSKTPLDLQ 333
>gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
Length = 343
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 158/318 (49%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + E E + + + A + +P+DP+ Q + +EE
Sbjct: 23 ITDPDELLQLLSLNTHAMLKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FETHPGFSTDPL-EEQHSAVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIEQHPELDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L +++ + + H NH E + L AG+ LL+QSVLL+
Sbjct: 200 VIPDRITLSLCNRFEKSQLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRN 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA+L T + I PYY+H D G +HF + EE + I+ L KISG
Sbjct: 260 VNDSADTLADLSNTLFDAGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PCLAREIGGEPSKTPLDL 337
>gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 342
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220]
gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220]
Length = 342
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + E++ ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLHLLNLDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + H NH E E A+ RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRLRTAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 342
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
Length = 359
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 130/342 (38%), Positives = 201/342 (58%), Gaps = 11/342 (3%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T ++L + K +ID I +Y + + P +LI + N PI +Q +P +E
Sbjct: 26 SITKPEELIRILPVDKSKIDRI---IEYYPMRINPYYFSLIK--HKNCPIGKQAVPDMQE 80
Query: 67 LNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ + + DP+ + SP+ ++HRYP R+L + C +YCRFC R+ VG
Sbjct: 81 IEDINILSDPDPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVGY---NS 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++ K L YI+ I EV+ +GGDPL+L +++ ++LK LR I H++ILR HSR+P
Sbjct: 138 ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILRIHSRIP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
PQRI +L+ L++ P++I IH NHP E +EEA A S LA+AGI L Q+VLL
Sbjct: 198 CTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGCQTVLLN 256
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIN++ EI+ LM+ + +R+KPYY+H D+ G HF+ T++EG I+ SL SGLC
Sbjct: 257 GINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLYGY-SGLC 315
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y++DLPGG GKV + K + S ++ + + +Y
Sbjct: 316 VPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357
>gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301]
gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 342
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
SCF1]
Length = 342
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E + +E +++ + + NPNDP+ +Q I ++E P DP+ +
Sbjct: 39 EDLLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQ 97
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS + G++H+Y +R LL + C V CR+CFRR ++ + ++ + ALAYI
Sbjct: 98 HSVVPGLLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALAYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+V P RI L +
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLISELEAIPHIKRLRIHSRLPVVIPARITGALAERFAR 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + + H NH E ++ AA+ L AG+ LL+QSVLL+G+ND+ + LANL
Sbjct: 216 SSLQILLVNHINHAQEIDDDFRAAMKTLRQAGVTLLNQSVLLRGVNDNAQTLANLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYYLH D G +HF ++ +E + IV L ISG P ++ G K +
Sbjct: 276 DAGVMPYYLHVLDKVQGAAHFMVSDDEARTIVRELLTLISGYMVPKLAREIGGEPSKTPL 335
Query: 323 DTH 325
D
Sbjct: 336 DLQ 338
>gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638]
gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1]
gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1]
gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1]
gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736]
gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70]
gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736]
gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638]
gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43]
gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1]
gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1]
gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1]
gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70]
gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520]
gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736]
Length = 342
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
ATCC 33638]
Length = 335
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L L+ + + + + + + + + P NP+DP+ Q + +EE
Sbjct: 15 ITDPDELLRILLLNEHPNLQQGTAARRLFPLRVPRAFVSRMQPGNPSDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+
Sbjct: 132 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIESISHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL Q L + V + H NH E ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRDSMAQLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D E+LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLRRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLTREVGGQPSKTPLDL 329
>gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 342
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLLAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 342
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLHHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 351
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + + +++ + A + NP+DP+ Q + +EE
Sbjct: 23 ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FTATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L + V + H NHP E + A++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA L + I PYYLH D G +HF + E + +V +L +K+SG
Sbjct: 260 VNDSADTLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLKKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGEASKTPLDL 337
>gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes]
Length = 410
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 8/346 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
+R + +T+ + I E + Y ++TP A+L++P +P P+ +Q
Sbjct: 31 WHMRKR-ITNLDKAREWIRPTPLEEKAIAETAGKYRWSVTPYYASLMDPDDPGCPVRQQA 89
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EL DP+GD + +VH+YPDR+++ + CPVYCR C R+
Sbjct: 90 VPALGELMEFSGAEVDPVGDMYYRRTNRVVHKYPDRVIMLITEACPVYCRHCTRKFHTTD 149
Query: 121 QKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
GT +D L YI + +I +V+ TGGDPL +L++++ LR I V+I
Sbjct: 150 VDGTYFERNEGEDFSEDLRYIADHPEIRDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEI 209
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R SR P++ PQR+ PEL + L PV++ H NHP E + E+ AI RL GI +
Sbjct: 210 IRIGSRFPVLLPQRVTPELCEMLARY-HPVWLNTHFNHPKEITPESERAIDRLLRHGIPV 268
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+VLL+GINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L
Sbjct: 269 GNQTVLLRGINDDLGTMRRLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGL 328
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ I+G P Y+L GK+ + ++ +G + ++
Sbjct: 329 QGHITGFGVPQYVLTT--RLGKIPMVRPYYRETPDG-LVLRNYRGE 371
>gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 335
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 4/325 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLK 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
K+SG P ++ G K +D
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322
>gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 335
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 4/325 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + ++ + + +++ + A + NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL YI++ S++ E+IF+GGDPL+ L ++ L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHSELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALLK 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
K+SG P ++ G K +D
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322
>gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401]
gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 AIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338
>gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
Length = 342
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q + +T+ +L ++ Q + + + + + + + +P DP+ Q
Sbjct: 17 QQLAEAITNPDELLQILGLESHQASKDGNDARKLFPLRVPRPFISRMKKGDPQDPLLLQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ K E + P DP+ + N++ + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 77 LTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 135 -EDNKGNKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQLEAIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P+RI L Q L + V + H NH E + AA+ +L NAG+ LL+Q
Sbjct: 194 HSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQKLKNAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+G+N+D + LANL + I PYYLH D G +HF ++ +E + ++ L K
Sbjct: 254 SVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQEARLLIQQLLGK 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+SG P ++ G K +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus
denitrificans PD1222]
gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222]
Length = 366
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 159/345 (46%), Positives = 216/345 (62%), Gaps = 4/345 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L + +T+ L A L + + + +++ + I ++P + + P D IA QF+P
Sbjct: 21 LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAM--GAPGDGIAAQFVP 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL I PEE DPI D SP G+ HRYPDR++L + C VYCRFCFRRE+VG +
Sbjct: 79 DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVGEEG 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L D AAL Y+ I EVI TGGDP++LS +R+ ++ L I HV I+RFH+
Sbjct: 139 --TLPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
RVP+V P RI+ ++ L V++ IH NH E + A AA++RLA+AGI LLSQ+V
Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+N DPE+LA+L R + R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S
Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
G C P Y+LDLPGG+GKV + ++K+ G G Y I D H+Y
Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361
>gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227]
gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94]
gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112]
gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83]
gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74]
Length = 349
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 4/315 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVK 321
P ++ G K
Sbjct: 320 PKLAREIGGEPSKTP 334
>gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627]
gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627]
gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431]
Length = 342
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTDPDELLRLLKIDANEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 YIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 347
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 101/328 (30%), Positives = 168/328 (51%), Gaps = 4/328 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + Q+ ++ + + + A + P + DP+ Q + ++E
Sbjct: 23 ITDPDELLRLLALDTHPQLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIVTPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI+++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQQPQLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL Q L ++ V + H NH E E +++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLAQSSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LA L + I PYYLH D G +HF + +E + ++ L ++SG
Sbjct: 260 VNDNADTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS 334
P ++ G K +D ++ N +
Sbjct: 320 PSLTREIGGEASKTLLDIGMPQRQENQN 347
>gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
ATCC 33641]
Length = 335
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 4/324 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P NP+DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPSLQQGSAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 132 NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLVGELESITHIKRLRIHSRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI P L Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRDSMAQLKRAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
P ++ G K +D ++
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335
>gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 344
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + +++ + A + +PNDP+ Q + E
Sbjct: 23 ITEPAELLEYLALSDSPEWQKGHDARRLFALRVPYAFARRMKKGDPNDPLLLQVMTSASE 82
Query: 67 LNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FITTPGYSTDPLEEQDDAIAVPGLLHKYINRALLLVKGGCAVNCRYCFRRHFPYQDNQG- 141
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + AL YI+++ ++ E+IF+GGDPL+ L +L + I H++ LR HSR+P
Sbjct: 142 -NKANWRQALDYIRQQPELDEIIFSGGDPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLP 200
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI L + ++ + + H NH E E A++RL +AG+ LL+Q VLL+
Sbjct: 201 VVIPARITETLTKRFSQSHLQILLVTHINHANEIDRELCDAMTRLKHAGVTLLNQGVLLR 260
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + LA L + I PYYLH D G +HF ++ +E + I+ L K+SG
Sbjct: 261 GVNDNADTLAALSNALFDAGIMPYYLHVLDRVQGAAHFMVSDDEARVIMRELMTKVSGYM 320
Query: 306 QPFYILDLPGGYGKVKIDT 324
P ++ G K ID
Sbjct: 321 VPKLTREIGGEPSKTPIDL 339
>gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74]
Length = 301
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 3/297 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+ +++ + + + NP+DP+ RQ + ++E I P DP+ + HS + G
Sbjct: 4 RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPG 62
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y +R LL + C V CR+CFRR ++ + ++ + AL Y+ ++ E+I
Sbjct: 63 LLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMI 120
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L++ + +
Sbjct: 121 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQIL 180
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ H NH E E A+++L AG+ LL+QSVLL+G+ND+ + LANL + + P
Sbjct: 181 LVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMP 240
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YYLH D G +HF ++ +E ++I+ L +SG P ++ G K +D
Sbjct: 241 YYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQ 297
>gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299]
gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299]
Length = 342
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L I E++ + +++ + + NP+DP+ RQ + +EE
Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 YIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L++ + + + H NH E E A+++L G+ L+QSVLL+G
Sbjct: 200 VIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTQLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEARQIMRELLTLVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 342
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 3/303 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
E + +E +++ + + NP DP+ +Q + ++E P DP+ +
Sbjct: 39 EALRAGREAKRLFALRVPRAFVARMEKGNPGDPLLKQTLTSQDEFITAPGYSTDPL-EEQ 97
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI
Sbjct: 98 NSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L++
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPIVIPARITDALVTRLEQ 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ V + H NH E + AA++R+ AG+ LL+QSVLL+G+ND +LA+L
Sbjct: 216 SRLQVLLVNHINHANEIDADFRAAMARMRKAGVTLLNQSVLLRGVNDSARVLADLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYYLH D G +HF +T EE +KI+ L +SG P ++ G K +
Sbjct: 276 DAGVMPYYLHVLDRVQGAAHFMVTDEEARKIMRELLTLVSGYMVPKLAREIGGEPSKTPL 335
Query: 323 DTH 325
D
Sbjct: 336 DLQ 338
>gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
Length = 340
Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++A L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338
>gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
Length = 339
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 111/332 (33%), Positives = 176/332 (53%), Gaps = 5/332 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+R++ + S + L ++ + Y ++TP +LI +P+DPI Q
Sbjct: 11 WQVRNR-IRSGRQLAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQC 69
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E++ +DP+ ++ P+ G++HRY DR L+ C +YCR C R+
Sbjct: 70 VPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKRRW-- 127
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
K A + Y+ I EVI +GGDPL L K L + L LR I HV++LR
Sbjct: 128 -KAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLRI 186
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+V P RI L++ L++ P++ N P E + E+ A RL +AGI + +Q
Sbjct: 187 GSRIPVVLPMRITVPLVRILRKHR-PLWFNTQFNSPREITPESAEACERLVDAGIPVSNQ 245
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLLKGINDD E + L+ + ++PYYL D G HFR+ +G +++ + +
Sbjct: 246 SVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISRQ 305
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
SGLC P Y++D+PGG GK+ + T ++ +
Sbjct: 306 TSGLCLPRYVIDVPGGKGKMSLQTFSLLADSD 337
>gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2]
Length = 341
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ TS + L + + + ++ + + + + A+L+ NPNDP+ Q +P K+E
Sbjct: 23 SFTSPEKLLSFLDLPSKDYEQDSKARRLFPMRVPRHFASLMEKGNPNDPLFLQVMPLKQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+I P +DP+ + + + KG++H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FSIEPGYTKDPL-EEHDTAGKGLLHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI I EVIF+GGDPL+ L + K + I H++ LR H+R+P+
Sbjct: 140 NKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHLAALAKEIAAIPHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R++ + + +HANH E S + + +L G+ LL+QSVLLK
Sbjct: 200 VLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPALKSRLEKLRTHGVTLLNQSVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + + L + + PYYLH D G SHF ++ ++ ++I+ +++ G
Sbjct: 260 VNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASHFYVSDDKARQIMQEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + ++ GK ID H
Sbjct: 320 PKLVREIGAQPGKTPIDLH 338
>gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043]
gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 347
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ + + +++ + A + NP+DP+ Q + + E
Sbjct: 23 ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTARAE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIVTPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+
Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L + V + H NHP E + +++RL +G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E LA L + I PYYLH D G +HF + E + +V +L +K+SG
Sbjct: 260 VNDSAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGEASKTPLDL 337
>gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC
17025]
gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025]
Length = 340
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L S DL L+ + + + E++ + I +T + + + +ARQF+P +
Sbjct: 3 RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I PEE DPIGD SP+ G+ HRY DR++L + C VYCRFCFRRE+VGS+ +
Sbjct: 58 ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS D AAL YI+ + EVI TGGDPL LS +RL+ +++ L I H+ +R HSRVP
Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQR++ ++I+ L PV+I +H NH E +A AA+ RLA+ G+ LLSQSVLL+
Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND + L L R + LR+KPYYLHH DLA G HFR +I +G+ I+A L+ +I+G+
Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG+GKV + ++ G G + + D VH Y
Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336
>gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1]
gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1]
Length = 342
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ E + +++ + + + +DP+ Q + +++E
Sbjct: 23 VTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQVLTRRQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNPG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +AAL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 140 NKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALEKIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI +L Q L E V + H NH E +E A+S L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSLKRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + LA L + I PYYLH D G +HF ++ EE +++V +L ++SG
Sbjct: 260 INDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARQLVRALLSQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 345
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + K Q+ +E + + + + A + P + DP+ Q + K+E
Sbjct: 23 ITDPDELLRLLALDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FITAPGFSQDPLDEQQ-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL Q L ++ V + H NH E + E +++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L L + I PYYLH D G +HF + +E + +V L ++SG
Sbjct: 260 INDRVDTLVALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PNLTREIGGEASKTLLD 336
>gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5]
gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 382
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 149/344 (43%), Positives = 203/344 (59%), Gaps = 8/344 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ L A L+ + ++E++ Y+ A+ P A LI P+DPI Q +P
Sbjct: 26 RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLITR--PDDPIGLQVVPDAS 83
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL I P ER DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G V
Sbjct: 84 ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L E AL +++ I EVI TGGDPL+LS +RL +++ L + HV +R HSRVP
Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP RI L + E + +++ +HANH EF+ A AA+ R+ I +L QSVLL+
Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND L L R VE R+KPYYLH D A GT+ F + I EG++++A L+ +++GL
Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN----GSYCITDHHNIVH 345
P Y LD+PGGYGKV + ++ G + D H
Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEGPAPDGTGLSVRDPAGGRH 365
>gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
Length = 356
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 146/336 (43%), Positives = 212/336 (63%), Gaps = 4/336 (1%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ TL + DL +A L + ++ + +++A+ P +LI +P+DPIARQ IP
Sbjct: 18 KRHTLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLI--THPDDPIARQVIPD 75
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EL LP E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G
Sbjct: 76 ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GG 134
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+LS+ E AL ++++ I E+I TGGDPL+L+ +RL+ ++++L I H++ +R HSR
Sbjct: 135 GLLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+ DP R+ EL+ + E + +++ IHANH E + A AI + + I +LSQSVL
Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND E L L+R ++ R+KPYYLHH D AAGT HF + + +GQ ++ L+ +++G
Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
L P Y+LD+P G GKV I + G+ D
Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349
>gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329]
Length = 340
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L L + I PYYLH D G +HF + E ++++A L E +
Sbjct: 255 VLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338
>gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 340
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + P DP+ + + + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHPGYSNDPL-EEQDNEVPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + +I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAHIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L+ + + + H NH E ++E + +L AG+ LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKLKRAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E L + I PYYLH D G +H+ ++ EE + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEAKAIMRGLITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
43969]
Length = 335
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P +P+DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGDPSDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L ++ V + H NH E + ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRDSMAQLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD ++LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
P ++ G K +D ++
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335
>gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
Length = 345
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 8 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 62 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 119
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 239 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 298
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341
>gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 316
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 136/311 (43%), Positives = 190/311 (61%), Gaps = 3/311 (0%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
+ + I+ +P+DPI RQ +P EL LP ER DPIGD HSP+ + HRYP R L
Sbjct: 1 MPQSYLDKIDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRAL 60
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L +VC +YCR CFR+E + + S E ALAY+ E +++ EVI TGGDPL LS
Sbjct: 61 LYPTYVCSMYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLS 119
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPY 217
+L+ + L I+H+ +LR H+RVP+ P R+ P L+ L+ + + V + H NHP
Sbjct: 120 DVQLEALRSRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPR 179
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDL 276
E ++A+ A RL AG +LL+QSVLL+G+ND+ E+LA L V KPYYLHH DL
Sbjct: 180 ELDDDALTACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDL 239
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
G SHFR +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I + +C
Sbjct: 240 TRGVSHFRTSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWC 299
Query: 337 ITDHHNIVHDY 347
+ +H Y
Sbjct: 300 FSTWAGGLHHY 310
>gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 342
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 3/297 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E +++ + + NP+DP+ +Q + ++E P DP+ + +S + G
Sbjct: 45 REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTSQDEFVTAPGYSTDPL-EEQNSVVPG 103
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y +R LL + C V CR+CFRR + + ++ + AL YI ++ E+I
Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYADNQG--NKRNWQVALDYIAAHPELDEII 161
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L ++ V
Sbjct: 162 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVL 221
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ H NH E +E AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L + + P
Sbjct: 222 LVNHINHANEIDDEFRAAMIRLRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YYLH D G +HF +T EE ++IV L +SG P ++ G K +D
Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60]
Length = 342
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 3/315 (0%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
A L L Q E + + + + I +PNDP+ RQ + E
Sbjct: 27 ADLLAQLGLSDHPQWLAGCEARRLFPLRVPRAFISRIRRGDPNDPLLRQVMSDAAEFIET 86
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + +
Sbjct: 87 PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P
Sbjct: 144 WQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
R+ L Q + ++ + + H NH E E A+ RL AG+ LL+QSVLL+G+ND
Sbjct: 204 RVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGRLKQAGVTLLNQSVLLRGVNDS 263
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ LA L + I PYYLH D G +HF + +E ++++ L ++SG P
Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDEARRLMHGLLAQVSGYLVPRLT 323
Query: 311 LDLPGGYGKVKIDTH 325
++ G K ++D H
Sbjct: 324 REIGGEPSKTQLDLH 338
>gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
Length = 327
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 101/326 (30%), Positives = 168/326 (51%), Gaps = 4/326 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + + ++ E + +++ + + + +DP+ Q
Sbjct: 1 MQQLADVVTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++E P DP+ + + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 61 VLTRRQEFIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + +AAL YI E ++ E+IF+GGDPL+ L ++ L I H++ LR
Sbjct: 120 QDNPG--NKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALEQIPHLKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI +L Q L + V + H NH E E ++ RL AG+ LL+
Sbjct: 178 IHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRLKRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ +E +++V SL
Sbjct: 238 QSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEARQLVRSLLS 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
++SG P ++ G K +D
Sbjct: 298 QVSGYLVPKLAREIGGEPSKTPLDLQ 323
>gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
Length = 341
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 122/320 (38%), Positives = 187/320 (58%), Gaps = 8/320 (2%)
Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
+K +++ Y ++ A LI P+DPI +Q +P EL + DP+ + SP+
Sbjct: 22 LKPVADLYPYRISSYYAGLI--TAPHDPIWQQCVPSLLELVDTEQHP-DPLDEERLSPVP 78
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G++HRYPDR +L + + C YCRFC R+ VG G AAL YI Q+ ++
Sbjct: 79 GLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPA----LSAALEYIAATPQLRDI 134
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
I +GGDPL+LS L ++L LR I HV+++R SR+P+ P RI P + L E P+
Sbjct: 135 ILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAPARITPAFCRMLAEH-HPL 193
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
Y+ H NHP E + EA A LA+ G+ L +Q+VLLKG+NDD + L+ + L+++
Sbjct: 194 YLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVNDDSPTMQALLTGLLRLQVR 253
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
PYYLH DL GT+HFR +E G++++ +L+ KISG+ P +++DLPGG GKV + ++
Sbjct: 254 PYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHFVIDLPGGKGKVPVLPDSL 313
Query: 328 KKVGNGSYCITDHHNIVHDY 347
+VG + + +Y
Sbjct: 314 TRVGEAVWQVQTSSGETINY 333
>gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
Length = 340
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336
>gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355]
Length = 342
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + +++ + + + DP+ Q + ++E
Sbjct: 23 VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + N S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E V + H NH E E A+ RL A + LL+QSVLL+G
Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL ++SG
Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 392
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 124/356 (34%), Positives = 197/356 (55%), Gaps = 12/356 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR+ + +++DL + + I+ + Y TP A+L++ ++ N PI Q I
Sbjct: 19 QLRN-LIKTSEDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQTI 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ I DP+GD ++ ++H+YP+RI+L + CPVYCR C R+
Sbjct: 78 PHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTDV 137
Query: 122 KGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+GT S E AYI+ +I +V+ TGGDPLI K L+ ++K LR IKH+ I+
Sbjct: 138 EGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINII 197
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR P+ PQRI + Q L++ P+++ H NHP E +EEA A RL GI +
Sbjct: 198 RIGSRYPVFAPQRITEKFCQMLEKY-HPIWVNTHFNHPKEVTEEAATACDRLLRHGIPVQ 256
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLLKGINDD E + +L++ + +R++PYYL+H D +G SHF T+E+G++I+ ++
Sbjct: 257 NQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAMV 316
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI---VHDY--PP 349
+G P Y++ GK+ ++ + +G ++ V +Y PP
Sbjct: 317 GFETGFSVPQYVVTT--TLGKLAVNREYVITQEDGRIIGRNYKKESLDVTEYIKPP 370
>gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 345
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P NP+DP+ Q + +EE
Sbjct: 23 ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIENISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRDSMAQLKRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E+LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 260 VNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGQPSKTPLDL 337
>gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 374
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 193/346 (55%), Gaps = 8/346 (2%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ L + +D+ + D K++S Y TP L + N DPI +Q
Sbjct: 28 WQIKNR-LKTLEDIKKI--LPNVNEDVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQI 84
Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+P ++E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M
Sbjct: 85 LPDEKEIDEKYQEGAFLDPFLEDEKSPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++ + YI+ I EV+ +GGDPL L +++++ ++K L I HV I+
Sbjct: 145 -LEDERARTKQEYDVMFEYIKSNKAIKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDII 203
Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
R SR + +P R + EL++ ++ K V+I H NHP E + E A+ + + G +
Sbjct: 204 RIGSRELVSNPFRFYDEELLEIFEKYDK-VWIVTHFNHPNEITSETKKAVKNILSTGTPV 262
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
L+Q+VLLKGINDD + NLMR+ ++++IKPYYL H D G HF+ IE+G +I+ L
Sbjct: 263 LNQTVLLKGINDDKYTMENLMRSLLKVKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHL 322
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ ++SGL P + +DL G GKV + + NG Y ++
Sbjct: 323 RGRVSGLGNPTFAVDLVNGLGKVPLLPEYLISKKNGFYEFKNYQGK 368
>gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
Length = 345
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + Q+ +E + + + A + P + DP+ Q + ++E
Sbjct: 23 ITDPDELLRLLALDNHPQLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIATPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + L ++ V + H NH E E ++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCRRLAQSPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ LA L + I PYYLH D G +HF + ++ + +V L ++SG
Sbjct: 260 VNDNANTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P ++ G K +D
Sbjct: 320 PSLAREIGGEASKTLLD 336
>gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
43970]
Length = 335
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P +P DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPNLQQGSAARRLFPLRVPRAFVARMQPGDPFDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L ++ V + H NH E + ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRDSMAQLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D E+L L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
P ++ G K +D ++
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335
>gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
Length = 340
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR +
Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++ L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMVGLLENV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338
>gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
MS-1]
Length = 312
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 163/309 (52%), Positives = 213/309 (68%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
L S L A LI + ++ ++ Y++++T +A LI P P+DPIARQF+P+ EE
Sbjct: 4 ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG + L
Sbjct: 64 LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + A YI + +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V+P RI+ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + L LMR FVE RIKPYYLH DLA GT H R T+ EGQ ++ L+ ++SGL Q
Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303
Query: 307 PFYILDLPG 315
P Y+LD+P
Sbjct: 304 PLYVLDIPA 312
>gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
Length = 340
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146]
gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 342
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 3/315 (0%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
A L L Q E + + + + I +PNDP+ RQ + E
Sbjct: 27 ADLLAQLGLSDHPQWLAGCEARRLFPLRVPHAFISRIRRGDPNDPLLRQVMSDAAEFIET 86
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + +
Sbjct: 87 PGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCRYCFRRHFPYQENQG--TRAN 143
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P
Sbjct: 144 WQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
R+ L Q + ++ + + H NH E E A+ RL AG+ LL+QSVLL+GIND+
Sbjct: 204 RVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMERLKQAGVTLLNQSVLLRGINDN 263
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ LA L E I PYYLH D G +HF + +E ++++ L ++SG P
Sbjct: 264 ADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDEARRLMNGLLSRVSGYLVPRLT 323
Query: 311 LDLPGGYGKVKIDTH 325
++ G K +D H
Sbjct: 324 REIGGEPSKTPLDLH 338
>gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
49242]
Length = 363
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 170/326 (52%), Positives = 223/326 (68%), Gaps = 2/326 (0%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
+ ++ + + YS+A+TP +A LI+ +P DPIARQF+P EL LP+E DPIGD+
Sbjct: 36 PGRAQALRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDD 95
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
HSP G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG KG VLS + T+AAL YI
Sbjct: 96 AHSPAPGLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGH 155
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
QI+EVI TGGDPL+LS +RL V + L I HV +LR H+R P P + E + L+
Sbjct: 156 RQIFEVILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALR 215
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E+GK +Y+A+H NH E + A AAI+RL AG LLSQ+VLLKG+NDD + L LMR
Sbjct: 216 ESGKALYVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDL 275
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V LR+KPYYLHHPDLA GTSHFRL+++ G ++ + L +++G+ P Y+LD+PGG+GK
Sbjct: 276 VALRVKPYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAP 335
Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY 347
+ + + G G + I D VH Y
Sbjct: 336 VS--DAETDGEGGWRIADRSGRVHLY 359
>gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685]
gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685]
Length = 342
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 3/315 (0%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
A L +L + E + + + + P +P DP+ RQ + E
Sbjct: 27 ADLLAQLSLADHPEWRAGCEARRLFPLRVPRAFIRRMRPGDPQDPLLRQVMSDAAEFIET 86
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + +
Sbjct: 87 PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ AL Y++E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P
Sbjct: 144 WQRALEYLREHPELDEIIFSGGDPLMAKDHELDWLFSQLESLPHLKRLRIHSRLPVVIPA 203
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
R+ L Q + E+ + + H NH E E AA+ RL AG+ LL+QSVLL+G+ND+
Sbjct: 204 RVTETLCQRMAESRLQMLLVTHINHANEIDEALSAAMQRLKQAGVTLLNQSVLLRGVNDN 263
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ LA L + I PYYLH D G +HF + +E + ++ L ++SG P
Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMVPDDEARVLMHGLLARVSGYLVPRLT 323
Query: 311 LDLPGGYGKVKIDTH 325
++ G K ++D H
Sbjct: 324 REIGGEPSKTQLDLH 338
>gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 340
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103]
gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103]
Length = 342
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + +++ + + + DP+ Q + ++E
Sbjct: 23 VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + N S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+
Sbjct: 140 NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E V + H NH E E A+ RL A + LL+QSVLL+G
Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL ++SG
Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
Length = 342
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ ++ + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 81 AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+
Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI L Q L+++ + +H NH E + A +L NA + LL+Q VLL
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLKLKNAHVTLLNQGVLL 257
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND+ + LA+L R + I PYYLH D G +HF + E ++I+ SL +SG
Sbjct: 258 RGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGY 317
Query: 305 CQPFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 318 MVPKLTREIGGEPSKTLLDL 337
>gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
Length = 342
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + E + + + A + +P DP+ Q + +EE
Sbjct: 23 ITDPDELLHLLSLNTHSILKEGHGAKRLFPLRVPRSFAARMKKGDPRDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P+ DP+ + S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FAVTPDFSTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI + +I E+IF+GGDPL+ L ++ + I HV+ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRIESIPHVKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI L L ++ V + H NH E E +++RL AG+ LL+QSV L+
Sbjct: 200 VIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTRLKQAGVTLLNQSVFLRD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ E LA+L + I PYY+H D G +HF + EE + I+ L K+SG
Sbjct: 260 INDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEEAKIIMRELLSKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLTREIGGEPSKTPLDL 337
>gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica
W22703]
Length = 328
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 4/331 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
MQ +T +L + + + + + + + + P NP+DP+ Q
Sbjct: 1 MQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 60
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 61 VLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY 119
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLR 177
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI EL Q L ++ V + H NH E ++++L AG+ LL+
Sbjct: 178 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLN 237
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + +E ++++ L
Sbjct: 238 QSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 297
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
++SG P ++ G K +D ++
Sbjct: 298 RVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 328
>gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 340
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 340
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
Length = 342
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ + + + + A + +PNDP+ Q I EE
Sbjct: 23 ITDPDELLQLLSLHEHPELTKGSSARRLFPLRVPRAFAARMRASDPNDPLLLQVITAPEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
NI+P DP+ + S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FNIVPGFSADPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEQISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L ++ V + H NH E + ++ L +AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMMLLKHAGITLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+ P+ILANL + I PYY+H D G +HF ++ EE + I+ L K+SG
Sbjct: 260 VNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEEARGIIRELLTKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PRLAREIGGESSKTPLDLE 338
>gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029]
Length = 345
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 155/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ + S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 8 RAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VG++
Sbjct: 62 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNEG-- 119
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 239 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRITGI 298
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341
>gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
Length = 342
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + ++ +E + + + + P +P DP+ Q + +EE
Sbjct: 23 ITDPDELLTLLALNDNAELQSGREARRLFPLRVPRAFVARMQPGDPQDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FIAAPGFTTDPLDEQR-SVVPGLLHKYSNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI+ + ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWLIGELEGIAHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI Q L+++ V + H NH E + A++++L G+ LL+QSVLL+G
Sbjct: 200 VIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRASMAKLKRHGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND ++LA L + I PYY+H D G +HF + +E + I+ L K+SG
Sbjct: 260 VNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARVIMKGLMSKVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PKLTREIGGEPSKTILDL 337
>gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 340
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str.
91001]
gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP
32953]
gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua]
gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516]
gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F]
gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92]
gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10]
gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001]
gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua]
gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F]
gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia
pseudotuberculosis IP 31758]
gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 342
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P N +DP+ Q + +EE
Sbjct: 23 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+
Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 260 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLTREVGGEPSKTPLDL 337
>gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
Length = 342
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ E E +++ + + + DP+ Q + ++E
Sbjct: 23 VTDPAELLQLLALDRHAELAEGTEARRLFALRVPRAFIQRMKIGDAQDPLLLQVLTSRQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
N P DP+ + + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 83 FNDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ +AA+ YI + ++ E+IF+GGDPL+ L +++ L + H++ LR HSR+P+
Sbjct: 140 NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEALEKLPHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L V + H NH E +E + L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQMLKRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA+L + I PYYLH D G +HF + +E + +V L +SG
Sbjct: 260 VNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDEARALVRELLTMVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338
>gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 340
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLY 338
>gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
Length = 340
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ +L I + + + + + + NP DP+ RQ +
Sbjct: 19 QLSN-AISDPYELLKQLEIDATPWENGLTARRLFPMRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + EDP+ + + + G++H+Y +R LL + C V CR+CFRR
Sbjct: 78 PLSQEFEVHNGYSEDPL-EEQDAAVPGLLHKYHNRALLIVKGGCAVNCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + AL YI +I E+I +GGDPL+ L +++ I H++ LR H
Sbjct: 135 EDNKGGKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKAESIHHLKTLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI EL Q LK+ + H NH E + E A+++R+ N G LL+Q
Sbjct: 195 SRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMARIKNTGTTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L + I PYYLH D G +HF ++ ++ + I+ L +++
Sbjct: 255 VLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDDAKAIIQGLIKRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P + G K +D H
Sbjct: 315 SGYLVPKLTREEGGRASKTPLDLH 338
>gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4]
Length = 340
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis
Angola]
gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Angola]
gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. IP275]
gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis YPIII]
gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia
pseudotuberculosis PB1/+]
gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D106004]
gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
Z176003]
Length = 334
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P N +DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+
Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLTREVGGEPSKTPLDL 329
>gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont]
Length = 342
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 3/303 (0%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
++ E +++ + + N DP+ Q + ++E P DP+ + +
Sbjct: 39 AELAAGSEARRLFALRVPRAFIQRMQRGNAQDPLLLQVLTSRQEFTDAPGYSTDPLDEQS 98
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
S + G++H+Y +R +L + C V CR+CFRR + ++ +AA+ YI
Sbjct: 99 -SVVPGLLHKYKNRAMLLVKGGCAVNCRYCFRRHFPYQDNQG--NKRNWQAAIDYIAAHP 155
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ E+IF+GGDPL+ + L ++ L I H++ LR HSR+P+V P RI L Q L +
Sbjct: 156 ELDEIIFSGGDPLMAKDQELAWLIGALENIPHLKRLRIHSRLPVVIPARITEGLCQLLAD 215
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
V + H NH E E + RL AG+ LL+QSVLL+G+NDD + LA L
Sbjct: 216 TRLQVLLVSHINHAQEIDEALRERMQRLKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALF 275
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ I PYYLH D G +HF + E+ + +V L +SG P ++ G K +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFFVPDEQARALVRQLLTMVSGYMVPKLAREIGGEPSKTPL 335
Query: 323 DTH 325
D
Sbjct: 336 DLQ 338
>gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395]
gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2]
gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 340
Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGGKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
D182038]
Length = 334
Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P N +DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+
Sbjct: 132 NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLTREVGGEPSKTPLDL 329
>gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 345
Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 131/350 (37%), Positives = 188/350 (53%), Gaps = 12/350 (3%)
Query: 1 MQLRHKTLTSAQDL--YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q R + DL L + ++ Y + +TP LI + DP+
Sbjct: 4 WQERSRNSILCSDLVAQRFGLDS----HALAQVVERYPMRITPHQFELIRQAD--DPLGC 57
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q IP EL DP+ + SP+ +VHRYP R+LL + C YCRFC R+ V
Sbjct: 58 QVIPDPRELLD-DSLLVDPLNEEQLSPVPHLVHRYPYRVLLLVAGSCFSYCRFCTRKRKV 116
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G +S D + YI E ++ EVI +GGDPL +S + L VL L I H+Q++
Sbjct: 117 GCS-SMSVSLGDILKGIDYIAEHPEVNEVILSGGDPLTMSDRLLDDVLARLSRIPHLQVV 175
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R SR P+V P+RI L L+ +PVY H NHP E +E + A RL +G+I+
Sbjct: 176 RIGSRAPVVMPERITDALCALLRRY-QPVYFLTHFNHPREITEATVEACQRLVRSGVIVA 234
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL+G+ND+ E L L T L+I+PYYLH DL GTSHFR +E+G I+ L+
Sbjct: 235 NQTVLLRGVNDNSETLFKLFHTLYRLQIRPYYLHQMDLTCGTSHFRTRLEDGIAIMDDLR 294
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+SGL P YI+DLPGG+GKV + ++++G+ + + + DYP
Sbjct: 295 GPLSGLAVPSYIVDLPGGHGKVPVTPDYVQRLGDHA-RLRAADGTLVDYP 343
>gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 343
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P NP+DP+ Q + +EE
Sbjct: 23 ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C + CR+CFRR
Sbjct: 83 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD E+LA L T + I PYY+H D G +HF + +E ++++ L ++SG
Sbjct: 260 VNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
P ++ G K +D ++
Sbjct: 320 PRLAREIGGQPSKTPLDLRLMQSE 343
>gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 340
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++I+A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQIMAGLIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLIPKLTREIGGKPSKTPLDLH 338
>gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
Length = 340
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ E L T + I PYYLH D G +HF ++ E ++++A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAEARQLMAGLIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338
>gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
Length = 340
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
+ L + +DL +A L + + ++E++ + I LTP + +DP +ARQF+P
Sbjct: 3 RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+
Sbjct: 57 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LDLPGG+GKV + ++ G G + + D +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336
>gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
Length = 340
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMAGLIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338
>gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
Length = 340
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + G++H+Y +R+LL + C V CR+CFRR +
Sbjct: 83 FEVHEGYSNDPL-EEQDNDQPGLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + ++ YI +I EVIF+GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEHIEAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q K+ + + H NH E ++ I+++ +L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMKKLKLAHVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + L L + I PYYLH D G +HF ++ E+ ++++ L E +SG
Sbjct: 260 VNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMGELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338
>gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
Length = 377
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 129/348 (37%), Positives = 209/348 (60%), Gaps = 10/348 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+++ +DL + + ++I++I Y + +TP + I D I +Q +P +
Sbjct: 10 QSVVKPKDLADRLGVDPKEIEDI---VGDYPMRITPTVLATIKEKG--DAIWKQVVPDRA 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ E +DP+ ++ SP+ +VHRYPDR+LL + + CP+YCRFC R+ +VG K
Sbjct: 65 EMADADAE-DDPLEEDLMSPVPHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGF 121
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L + + A+AY++E ++ +VI +GGDPL+L L+++LK+LR I H++++R +RVP
Sbjct: 122 LKKGELDRAIAYLREHQEVRDVILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVP 181
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
P+RI P+L +K+ P Y+ +H NHP E + E A LA+AG+ L +Q+VLLK
Sbjct: 182 GSLPERITPKLCDIIKKY-HPFYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLK 240
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+NDDPEI+ LM + R+KPYYL+ DL GT+HFR ++E G KI+ SL+ SG+
Sbjct: 241 GVNDDPEIMKRLMHQLLLARVKPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMG 300
Query: 306 QPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352
P +++D PGG GK+ + + + S + ++ N YP S
Sbjct: 301 VPHFVIDAPGGGGKIPLLPADYLVNLDEDSAVLRNYENRTFHYPQPGS 348
>gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
Length = 340
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 4/323 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324
SG P ++ G K +D
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDL 337
>gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114]
gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114]
Length = 340
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + ++ L G++H+Y +R+LL + C V CR+CFRR +
Sbjct: 83 FEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + ++ YI +I EVIF+GGDPL+ LQ ++ + I H++ LR HSR+P+
Sbjct: 140 SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHIEAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q + + + H NH E ++E I+++ +L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHKLKLAHVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ + L L + I PYYLH D G +HF ++ E+ +++++ L E +SG
Sbjct: 260 VNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMSELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338
>gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
oleovorans Hxd3]
Length = 358
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 132/351 (37%), Positives = 198/351 (56%), Gaps = 10/351 (2%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + +DL + + Y +++ P +LI P DP+ RQ
Sbjct: 17 WQTIAGRAIADPKDLPDRLKAPP----GAAAVCRAYPMSVNPYYLSLI--QAPGDPLWRQ 70
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL+ + +DP+ + SP+ G++HRYPDR+++ + CPV CRFCFR+ + G
Sbjct: 71 VVPDARELSGTLTD-DDPLTETAQSPVPGLIHRYPDRVVVLVSGRCPVVCRFCFRKRLAG 129
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
L+ +AA AY++ + EVIF+GGDPL+L +L L+ I HV+ LR
Sbjct: 130 R-AAASLTDDQVDAAAAYVRAAPAVREVIFSGGDPLMLEDDKLCAALEKFAAIGHVETLR 188
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R P+ PQRI +L+ LK+ P+Y+ +H NHP E + A AA +RLA+AGI L S
Sbjct: 189 IHTRTPVALPQRITGDLVVLLKKF-LPLYVNVHVNHPREITAPAEAACARLADAGIPLGS 247
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL GINDD + LMR + +R++PYYLHHPD+ GT HFR I G ++ SL
Sbjct: 248 QTVLLAGINDDAITMEALMRALLRIRVRPYYLHHPDVVKGTGHFRPPINRGLSVMRSLVG 307
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
++ G+ P Y++DLPGG GKV + + G + ++ V YP K
Sbjct: 308 RVPGMAVPRYVIDLPGGGGKVPLLPDYVVSSETGHLVVKNYQGKVFVYPEK 358
>gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech703]
Length = 348
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + E + + + A + P +P+DP+ +Q I K E
Sbjct: 23 ITDPGELLQLLALSDHPLLSQGHEARKLFPLRVPRAFAARMQPGDPDDPLLKQVITSKAE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + S + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 83 FLLTPGFTNDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+P+
Sbjct: 140 SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDGLLTGLEEITHLKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L ++ + + H NH E E + RL AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEALSLRLAQSRLQILLVTHINHANEIDAELAQGLHRLRRAGVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LANL + + PYYLH D G +HF + ++ ++ +L ++SG
Sbjct: 260 VNDSADELANLSHALFDAGVMPYYLHVLDKVQGAAHFLVPDDKATALIKTLMTQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P + ++ G K +D
Sbjct: 320 PRLVREIGGEASKTPLDL 337
>gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
opportunistum WSM2075]
Length = 366
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 139/349 (39%), Positives = 200/349 (57%), Gaps = 5/349 (1%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +DL A + + ++ + + + + +LI+ ++P DPI Q
Sbjct: 15 WQDDVRQGVRHVRDL-AALPLSPAERQAAQQAATLHKVRVPKTYLDLIDWNDPADPIRAQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP +EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E +
Sbjct: 74 VIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQCAVYCRFCFRKESLT 133
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S G + + E ALAYI + S+I EVI TGGDPL LS K L ++ + I HV++LR
Sbjct: 134 S-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAEIFMRIEAIPHVRLLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+RVP+ P RI P L++ L + V + H NH E ++ A AA + AG +LL+
Sbjct: 193 IHTRVPVALPSRITPGLVEAL-QGRLMVTVVTHFNHAREITDAAEAACRTMRQAGFVLLN 251
Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
QSVLLKG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+
Sbjct: 252 QSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 311
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
++SG+C P Y+LDLP G GKV + +I+ S+ I V Y
Sbjct: 312 ARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDGAVRGY 360
>gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
Length = 324
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 170/318 (53%), Positives = 219/318 (68%), Gaps = 2/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L S DL A LI E++ E+ + Y++A+ +A I P+ +ARQF+P E
Sbjct: 6 SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L LPEE DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG G L
Sbjct: 66 LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVGP-GGESL 124
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + LAYI + +IWEV+ +GGDP+ILS +RL +L L I H+ LR HSRVP+
Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+DP RI P +I L+ + KPV++ IHANHP EF+ A A ++ LA+AG+ LLSQSVLLKG
Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD L LMRTFV RIKPYYLH D+A GT+HFR +++EG+ +VA+L+ SGLCQ
Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303
Query: 307 PFYILDLPGGYGKVKIDT 324
P Y+LD P G GK ID
Sbjct: 304 PTYVLDAPDGPGKRPIDV 321
>gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 342
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 3/297 (1%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
+E +++ + + NP+DP+ +Q + +EE P DP+ + +S + G
Sbjct: 45 REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTAQEEFITAPGYSTDPL-EEQNSVVPG 103
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI S++ E+I
Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHSELDEII 161
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L+++ V
Sbjct: 162 FSGGDPLMAKDYELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVL 221
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ H NH E + AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L + + P
Sbjct: 222 LVNHINHANEIDDAFRAAMVRLRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YYLH D G +HF +T EE ++IV L +SG P ++ G K +D
Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
DSM 17374]
Length = 358
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 115/335 (34%), Positives = 185/335 (55%), Gaps = 3/335 (0%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
++ E+ ++ ++ A+LI P + +DPI RQ +P E+ P E
Sbjct: 20 RKQGIVLTEKEQAWEKDGTSPPFGVSTYYASLITPSDSDDPIRRQILPTSCEMMYSPGES 79
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
EDP+ + HS ++HRY +R+ + C VYCR CFRR G+Q+G +++D AA
Sbjct: 80 EDPLAEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRG-PATTEDIIAA 138
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
Y+ ++ E++FTGGD LS++++ ++ R ++ I+R SRVP+V P RI
Sbjct: 139 ARYVGAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITD 198
Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L+ +K+ P ++ + NHP E + ++ A +R +AGI + +QSVLL+G+NDD I
Sbjct: 199 GLMAVMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGI 258
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
L L + RIKPYYL DL GT+H R+ +E+G +V L+ ++SGL P Y +DL
Sbjct: 259 LEELCNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDL 318
Query: 314 PGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDY 347
P G GKV +D+ +K +G++ Y
Sbjct: 319 PEGGGKVPVDSMYLKGRDSDGAWVFETPDGGERRY 353
>gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 342
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 159/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + K + + + + + + +PNDP+ Q I EE
Sbjct: 23 ITDPDELLQLLSLDKHPTLTKGSGARRLFPLRVPRAFVTRMQVSDPNDPLLLQVITTPEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + S + G++H+Y +R LL + C + CR+CFRR +
Sbjct: 83 FTLTPGFSTDPLDEQR-SAVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY--EDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 140 NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEKISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L L ++ V + H NH E + ++ L AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMILLKQAGITLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IN+ + LA+L + I PYY+H D G +HF + EE + ++ L KISG
Sbjct: 260 INNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEEAKGLIRELLTKISGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGEPSKTPLDL 337
>gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
Length = 340
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEKLEIDPAKWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E + DP+ + + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSQEFEVHEGYSNDPLQEQGNE-TPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +L YI+++S++ EVI +GGDPL+ + LQ ++ + I H++ +R H
Sbjct: 137 NKG--NKLVWQQSLDYIRQQSELNEVILSGGDPLMAKDEELQWLINHIADIPHIKRIRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI PEL+ L + V + H NH E + E A+ L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMYDLKQAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND E L T + I PYY+H D G +HF ++ ++ + I+A L E++
Sbjct: 255 VMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQQAKAIMAGLLERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRKSKTPLDLH 338
>gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541]
gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541]
Length = 342
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q + +T+ +L ++ E E + + + + + +P+DP+ Q
Sbjct: 17 QQLAEAVTNPDELLQILNLEDHLPSREGNEARKLFPLRVPRPFISRMKKGDPSDPLLLQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 77 LTAKTEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEDIPHITRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P+RI L + L+++ V + H NH E + A+ +L AG+ LL+Q
Sbjct: 194 HSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQKLKRAGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+ +ND+ LANL E I PYYLH D G +HF ++ E ++++ L K
Sbjct: 254 SVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNEARELIRELLSK 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+SG P ++ G K +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32]
gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32]
Length = 340
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y R L+ + C + CR+CFRR
Sbjct: 78 PLSEEFEVHQGYSADPL-EEQDNAIPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338
>gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
Length = 340
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
Length = 340
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLRLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae]
Length = 340
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q + +T +L ++ ++ + + + + + NDP+ RQ
Sbjct: 17 QQLAEAVTDPDELLRLLSLQNNPELRAGSAARALFPLRVPHPFIAKMRIGDANDPLLRQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
I K E N+ P DP+ ++ HSP+ G++H+Y DR+LL + C V CR+CFRR
Sbjct: 77 ITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCRYCFRRHFPYE 135
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + ++ + AL YIQ +++ EVIF+GGDPL+ L ++ L I H++ LR
Sbjct: 136 ENKG--NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRLETIPHIKRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P RI L Q + V + H NH E E A+ +L + LL+Q
Sbjct: 194 HSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQLKQVNVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+GIND+ + LA L E I PYYLH D G +HF +T EE + I+ L +
Sbjct: 254 SVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEEARIIMKELLTR 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
ISG P ++ G K ID
Sbjct: 314 ISGYLVPRLTREIGGKLSKTPIDLQ 338
>gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
Length = 340
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I N +++ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQAGFAARNLFALRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + + G++H+Y +R L+ + C V CR+CFRR
Sbjct: 78 PLSEEFEVHEGYSADPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L Y+ + S+I EVI +GGDPL+ ++ ++ + I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAIEQIPHVETVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L + V + H NH E + E A+ +L +G LL+Q
Sbjct: 195 SRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLKLKFSGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338
>gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
Length = 340
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + + PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338
>gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 340
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL L+ + + + H NH E + E A +++L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYYLH D G +H+ ++ EE ++I+ + ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKEIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
Length = 340
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338
>gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131]
gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131]
Length = 342
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q + +T+ +L ++ + E E + + + + + +P DP+ Q
Sbjct: 17 QQLAEAITNPDELLQILNLENHLLSKEGSEARKLFPLRVPMPFISRMKKGDPLDPLLLQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ K E +I P DP+ + + + ++H+Y +R LL + C V CR+CFRR
Sbjct: 77 LTAKAEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY- 134
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H+Q LR
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQLEAIPHIQRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V P+RI L + L + V + H NH E E A+ +L +G+ LL+Q
Sbjct: 194 HTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQKLKLSGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+ +ND+ L NL + I PYYLH D G +HF ++ E ++++ L K
Sbjct: 254 SVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTEARQLIQQLLSK 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+SG P ++ G K +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
Length = 363
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 128/349 (36%), Positives = 199/349 (57%), Gaps = 3/349 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + +TS + L + +++ +++N + + NLI+P++P+DPI RQ +
Sbjct: 4 QQQSTIITSKETLGQYLALAEDEWLFDADLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVV 63
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+ +E IL EE+ DP+ + N+S + ++HRY R+ VCP+YCR CFRR G+
Sbjct: 64 PRWQEQRILDEEQLDPLCEVNYSVTERLIHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTF 123
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+G S + E A Y+ + E++FTGGD LS K L+ +++T R + ++R
Sbjct: 124 QG-PASKEQIEKAAEYVAVHPAVKEILFTGGDVFTLSTKALEAMIQTFRDKRPDLVIRLC 182
Query: 182 SRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P P RI+ +LI LK+ P Y+ NH E +E+AI A+ +AGI ++Q
Sbjct: 183 SRMPASYPMRIDADLIAMLKQFNTAPFYLMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQ 242
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+VLLKG+NDD +L L T V RIKPYYL DL +GT+HFR+ ++EG I A L+++
Sbjct: 243 TVLLKGVNDDVCVLEELCNTLVFNRIKPYYLFQGDLVSGTAHFRVPLKEGLAIEAELRKR 302
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDYP 348
+SGL P Y +DLP G GKV + + + G G + + YP
Sbjct: 303 LSGLAMPLYAIDLPQGGGKVPLMQGYLSEQSGCGLWSFRTVEGEIRTYP 351
>gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
Length = 340
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ DP+ + ++ + G++H+Y R L+ + C + CR+CFRR
Sbjct: 78 PLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLN 338
>gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
29473]
Length = 334
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + ++ + + + + + + DP+ Q + +EE
Sbjct: 15 ITDPDELLCLLALNEHAELRQGTAARRLFPLRVPRAFVARMRSGDAKDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+P +DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAVPGFTDDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+
Sbjct: 132 NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQLENIAHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L ++ V + H NHP E + +++RL AG+ LL+QSVLL+
Sbjct: 192 VIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMARLKQAGVTLLNQSVLLRD 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+DP++LA L I PYY+H D G +HF + +E + ++ L ++SG
Sbjct: 252 VNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDEARLLIKGLLSRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLAREIGGEPSKTPLDL 329
>gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99]
gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 342
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 154/296 (52%), Gaps = 3/296 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L +I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E +E + L AG+ LL+QSVLL+ INDD LA L + I PY
Sbjct: 223 VTHINHAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238]
gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 340
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L + I ++ E +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + ++ G++H+Y +R+LL L C V CR+CFRR +
Sbjct: 83 FEVHDGYSTDPLDEQDNEQ-PGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPY--EDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ YI ++ EVI +GGDPL+ L+ +++ L + H++ LR HSR+P+
Sbjct: 140 GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + E V + H NH E S +++L A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMTQLKQANVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L NL + I PYYLH D G +HF ++ E+ ++++A L E +SG
Sbjct: 260 INDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338
>gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 340
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I + ++ + + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPETLLKQLQIDPQPWSAGFRARKLFAQRVPQSFIDRMEKGNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E NI PE DP+ + + + G++H+Y +R+L+ + C + CR+CFRR S+
Sbjct: 78 PLIDEFNIHPEYSSDPL-EEQSNEIPGLLHKYHNRVLMIVKGGCAINCRYCFRRHFPYSE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + +L YI +I EVI +GGDPL+ L+ + + I HV+ LR H
Sbjct: 137 NKG--TKSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEIAKISHVKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI ELI+ ++ + H NH E + E A+ +L A + LL+Q
Sbjct: 195 SRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQKLKAANVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND+ + L +T + + PYY+H D G +HF ++ + ++I+A L E++
Sbjct: 255 VMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQRAREIMAELIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREVGGRKSKTPLDLH 338
>gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
Length = 340
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 155/324 (47%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L A I +++ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPSKLLEALEIDPTPWQAGFAARELFALRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q
Sbjct: 195 SRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+N+ L L + + PYY+H D G +HF ++ EE ++ L ++
Sbjct: 255 VMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEEAKRHFKGLISEV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338
>gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 340
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H
Sbjct: 135 EDNKGSKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERIATIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAINVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ E L T + I PYYLH D G +HF + +E ++I+A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDEARQIMAGLIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338
>gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + +L + + + + + + I P +P+DP+ RQ
Sbjct: 35 WQAQLRDAVRDPHELCRRLDLDTAWLGGAETGHALFPVRVPHAYLARIRPGDPDDPLLRQ 94
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E + DP+ + H P G++H+Y +R+LL C + CR+CFRR
Sbjct: 95 VLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACAINCRYCFRRHFPY 154
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ S E L Y+++ + I E IF+GGDPL +RL + + L I H++ LR
Sbjct: 155 AEN--SPSRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLAERLADIPHLKRLR 212
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P R++ L+ L + +H NHP E A+ RL AG+ LL+
Sbjct: 213 LHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADAMQRLRGAGVTLLN 272
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD E LA L E+ I PYYLH D G +HF + E +V +L+
Sbjct: 273 QSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVPDAEAVSLVETLRT 332
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+++G P + ++PG K +
Sbjct: 333 QLAGFLMPRLVREVPGEASKTPL 355
>gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
str. 'Deep ecotype']
Length = 341
Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 107/319 (33%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ T L + +E+ + + + + + A+L+ NPNDP+ Q +P +E
Sbjct: 23 SFTDPAKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P EDP+ + + + KGI+H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FLTSPGYSEDPL-EEHDTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S E L YIQ I EVIF+GGDPL+ L + + I HV+ LR H+R+P+
Sbjct: 140 SKHQWEEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RIN + + +HANH E SE + + L G+ LL+QSVLLKG
Sbjct: 200 VLPERINNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E +++L E + PYYLH D G SHF ++ +EG+ I+ +++ G
Sbjct: 260 VNDSGEAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + ++ G GK ID H
Sbjct: 320 PKLVREIGGQPGKTPIDLH 338
>gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
Length = 340
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + Q+ EVIF+GGDPLI L +++ + I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q
Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++ L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMGGLIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338
>gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
30120]
Length = 342
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q + +T+ +L ++ Q E E + + + + + +P DP+ Q
Sbjct: 17 QQLAEAVTNPDELLQLLNLEDHQPSREGHEARKLFPLRVPHPFISRMKKGDPLDPLLLQV 76
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR
Sbjct: 77 LTAKAEFDIHPGFSTDPL-EEQDNAIPSLLHKYRNRALMLVKGGCAVNCRYCFRRHFPY- 134
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ + + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEEIPHITRLRI 193
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V P+RI L Q L ++ V + H NH E +E A+ +L +G+ LL+Q
Sbjct: 194 HSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLKLKRSGVTLLNQ 253
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL+ +ND+ LANL ++ I PYYLH D G +HF ++ E ++++ L +
Sbjct: 254 SVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLEARQLIRELLSQ 313
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
+SG P ++ G K +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338
>gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2]
gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 363
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 105/323 (32%), Positives = 166/323 (51%), Gaps = 4/323 (1%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + +T +L + E + + + + + + L+ NP+DP+ RQ
Sbjct: 42 WQRQQADLITDPAELLAMLDLPVESLPDALSAATDFPLRVPRSYVALMERGNPHDPLLRQ 101
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +E+ P DP+ + H+ + G++H+Y R LL + C V+CR+CFRR
Sbjct: 102 VLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 161
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
T LS K + AL ++ + I EVI +GGDPL LS++RL+++L L I H++ LR
Sbjct: 162 Q---THLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQLLDALESIPHLRRLR 218
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR P+V P+R+ L L + +H NHP E S + L +AGI LL+
Sbjct: 219 IHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVERCRDLRSAGITLLN 278
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL G+ND + LA L + + PYYLH D G +HF ++ E ++I A+L+
Sbjct: 279 QSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAVSDEAAREIHAALRA 338
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P + PG K +
Sbjct: 339 RLPGFLVPRLTREEPGEPAKTVL 361
>gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
Length = 340
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWLDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q+
Sbjct: 195 SRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQA 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYYLH D G +H+ ++ EE + I+ + ++
Sbjct: 255 VLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKAIMRGVITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1]
Length = 340
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L + E E +++ + + NP DP+ Q +
Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q
Sbjct: 81 AQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + A+ YI +I EVIF+GGDP++ +L+ L I H+Q LR HS
Sbjct: 141 PG--NKTSWQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIPHLQRLRIHS 198
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V P+RI E L ++ H NHP E EE A+ +L A + LL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKLVGAKVTLLNQSV 258
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +ND+P L L + I PYYLH D G SHF ++ E+ +I L+ S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKALQIYKELQALTS 318
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 319 GYLVPKLAREIGGEPNKT 336
>gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 402
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 115/331 (34%), Positives = 182/331 (54%), Gaps = 7/331 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ +DL ++ + I+ ++ TP +L +P +PN PI R +
Sbjct: 29 QLQNRV--KGEDLARYFVLSDSERVGIQNTIRLL-VSTTPYYLSLSDPSDPNCPIRRMIV 85
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P KEE EE DP+ + SP++G+ H YP+R+LL H C VYCR C R V S
Sbjct: 86 PTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNRVLLFSNHSCSVYCRHCMRGRKVSSN 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + D E+A YI+ +I +V+ +GGDPL L+ R++ +LK L I HV+I R
Sbjct: 146 EE-RMEKSDLESAFDYIRNHPEIEDVVVSGGDPLNLADLRIEWILKELNQIPHVKICRLG 204
Query: 182 SRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P RI + Q +++ ++ NHP E ++E AI +L G+ +
Sbjct: 205 TRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQFNHPKECTKETKEAILKLLKVGVSVG 264
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGINDD E + L + +E+R++ YYL+ P+L G+ FR + G +IV ++
Sbjct: 265 NQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYDPELIPGSRGFRTPLARGIEIVEYMR 324
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
KI G+ P ++ DLPGG GK+ I +
Sbjct: 325 GKIGGMGIPQFVNDLPGGGGKITIGANWYLG 355
>gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
Length = 683
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 152/347 (43%), Positives = 208/347 (59%), Gaps = 1/347 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+ +TL A L A L ++ + Y+IALTP + LI+ +P DPIARQ++
Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL LP ER DP D +P+KG+VHRYPDR LLK L CPVYCRFCFRRE+VG
Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGPD 456
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G +LS + EAAL + Q+ E I TGGDPL+LS +RL +L L I H+ I+R H
Sbjct: 457 GG-LLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+RVP+ P+R+ L L K +++ +HANH EFS A A++RL AG+ LL QS
Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L R + ++KPYYLH D A GT+ F + IE+G+ I+ +L+ +
Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635
Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
+GL P Y+LDLPGG GK + + G + +P
Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEGADWLVEGPLDGVAQRHP 682
>gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
Length = 360
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 122/336 (36%), Positives = 183/336 (54%), Gaps = 6/336 (1%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
L + + E+ Y LI DP+ RQ +P EL+
Sbjct: 13 TLQALSRDPGADGAALSEVVRRYPFRTNEYYQGLIRQTG--DPLWRQVMPDAMELSDDAG 70
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+DP+ + SP+ +VHRYP+R+L + H C ++CRFC R+ S ++ +
Sbjct: 71 -LQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFCTRKRRWSS--PLPMTGELLR 127
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L YI+E Q+ +V+ +GGDPL+L RL+ +L LR+I HV +LR +RVP P+R+
Sbjct: 128 DGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHIPHVAVLRIGTRVPCALPERV 187
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL L P+++ IH NHP E +EE+ A + LA+AGI L SQ+VLL+ +NDD
Sbjct: 188 TGELATMLARH-HPLFLNIHFNHPREITEESRRACALLADAGIPLGSQTVLLRDVNDDAH 246
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+L L +T + LR++PYYL DL GT+HFR + G +IVA L+ +ISG+ P ++D
Sbjct: 247 VLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLEIVARLRNRISGMAVPQLVVD 306
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
LPGG GKV + + I+ +G + YP
Sbjct: 307 LPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342
>gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
Length = 359
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 148/342 (43%), Positives = 217/342 (63%), Gaps = 4/342 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TL S DL A L+ Q+ +++++ HY+ A+ P A+LI P+DPI RQ IP
Sbjct: 16 SRTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIET--PDDPIGRQVIPDG 73
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E++ E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G+
Sbjct: 74 AEIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGS 132
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
VL E AL +++ + I EV+ TGGDPL+LS +R++ +++ L + H+ +R HSRV
Sbjct: 133 VLDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRV 192
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
P+ DP R++ E+ L E + +++ +H NH E + +A AAI R+ I +L QSVLL
Sbjct: 193 PVADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLL 251
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+G+ND P+ L L+R V RI+PYYLH D A GT+ F + I EGQ+++ASL+ +++G+
Sbjct: 252 RGVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGI 311
Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
P Y+LD+PGG+GKV I + + +G+ T +H
Sbjct: 312 AWPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIHR 353
>gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
Length = 340
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI + ++ E+I +GGDPL+ + L +++ + I HV+ LR H
Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHVKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q
Sbjct: 195 SRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E++
Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338
>gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
Length = 362
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 10/340 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
++L S DL A LI E ++ ++ Y+IA+ P + LI + +DPI Q IP
Sbjct: 25 RSLRSLADLRRAGLIDDE--APLQAVAAQYAIAIPPAMQALI--TDRHDPIGLQVIPDPA 80
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ P E DPIGD+ SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG G V
Sbjct: 81 EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
LS + AL ++ QI EVI TGGDPL+LS +RL ++ L I H+ I+R HSRVP
Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ DP + ++ L E K +++ +H N+ E ++ A +I GI +LSQ+VLL+
Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND E L L R + LR+KPYYLH D A GT+ FR+ +EEG+ I+ +L+ +ISGL
Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P Y++D+PGGYGKV +D ++ G + D + H
Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDG----SVRDINGHRH 354
>gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116]
gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116]
Length = 340
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H
Sbjct: 137 NKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +N+ E L + I PYY+H D G +H+ ++ EE + I+ + ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEAKTIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 341
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 4/326 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + T L + + + + + + A + NP+DP+ RQ
Sbjct: 16 WQKVLSSAFTDPLALLKYLALDPAKFTDDIAARRLFPMRVPAPFAKRMEKGNPDDPLFRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P K+E N P DP+ + ++S G++H+Y R+LL + C V CR+CFRR
Sbjct: 76 VFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S L+ ++ + L YI++ S+I EVI++GGDPL+ L + + + I H++ +R
Sbjct: 135 S--DNHLNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIAQIDHIKRIR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI PELI+ + + +H NHP E + + +L AG+ LL+
Sbjct: 193 IHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKLTQAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLK IND + L + + + PYYLH D G HF + + I+A + +
Sbjct: 253 QGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIAKDIMAQMIK 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
++ G P + ++ G GK ID +
Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338
>gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 340
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP DP+ RQ +P +E
Sbjct: 23 AISDPFTLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPYDPLLRQILPLAQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND L +L T + I+PYYLH D G +HF + E ++++A L K+SG
Sbjct: 260 VNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEIARQLMAGLITKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLDL 337
>gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
Length = 340
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 161/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + NPNDP+ RQ +
Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR
Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI L Q L++ V + H NH E + E + + RL G+ LL+Q
Sbjct: 195 SRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338
>gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
ATCC 27126]
Length = 341
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ T L + +E+ + + + + + +L+ NPNDP+ Q +P +E
Sbjct: 23 SFTDPAKLLQHLGLDQEKYAQHIKARRLFPMRVPRHFVDLMEKENPNDPLFLQVMPLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P EDP+ ++ + KGI+H+Y R+LL + C V CR+CFRR + +
Sbjct: 83 FLTSPGYSEDPLDEH-DTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S L Y++ ++I EVIF+GGDPL+ + L + + I H++ LR HSR+P+
Sbjct: 140 SKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHLSWLANEITTIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI+ + ++ + +HANH E SE + + L G+ LL+QSVLLKG
Sbjct: 200 VLPERISHDFVEWFTALPLQKVLVLHANHANEMSETLKSRLKTLRERGVTLLNQSVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + +++L T E + PYYLH D G SHF ++ +EG++I+ +++ G
Sbjct: 260 VNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASHFYVSDDEGREIMEEAIKRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + ++ G GK ID H
Sbjct: 320 PKLVREIGGQPGKTPIDLH 338
>gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
Length = 338
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 14/325 (4%)
Query: 11 AQDLYNANLIKKE-----------QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q L N E ++ + K + + + L+ + NDP+ RQ
Sbjct: 16 LQQLANVITDPDELLQLLQLDTHPELPQGKSARRLFPLRVPRAFVALMRKGDANDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E + DP+ + + G++H+Y +R LL + C + CR+CFRR
Sbjct: 76 VLTSSAEFISPEDFITDPLAEQR-TAAPGLLHKYGNRALLLVKGSCAINCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ K+ + AL YI++ ++ E+IF+GGDPL+ + L ++ L I H++ LR
Sbjct: 135 QDNQG--NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELSWLIDALEKIAHIKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI L Q + + + H NH E ++++L G+ LL+
Sbjct: 193 IHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVLCDSMAKLKTKGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E+LA L I PYYLH D G +HF + +E ++++ L
Sbjct: 253 QSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHFMVNDDEARRLINGLLG 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
ISG P + ++ G K +
Sbjct: 313 CISGYLVPRLVREIAGEKSKTPLTL 337
>gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
Length = 340
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I + ++ + + NP+DP+ RQ +
Sbjct: 19 QLAN-GISDPEQLLTQLAIDPSPWQSGFKARALFAQRVPQSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P +E I P DP+ + N+S G++H+Y +R LL + C + CR+CFRR
Sbjct: 78 PLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCRYCFRRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H
Sbjct: 135 QDNKGNKLVWQQSLDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQIAAIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL+ E V + H NH E + E ++RL + LL+QS
Sbjct: 195 SRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLARLRAEKVTLLNQS 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND L + I PYYLH D G +HF ++ E+ + I+A L E++
Sbjct: 255 VLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQARTIIAGLIEQV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338
>gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans']
gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 342
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T L ++ + E E + + A + +P+DP+ RQ I +EE
Sbjct: 23 ITDPMQLLQLLRLEGHSGLREGAEARRLFPFRVPRAFAARMVTGDPDDPLLRQVITAREE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R L+ + C V CR+CFRR +
Sbjct: 83 FDPTPGYSTDPLDEQ-HSVVPGLLHKYQNRALMLVKGGCAVNCRYCFRRHFPYQENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A AYI++ ++ E+I +GGDPL+ L +++ L I H++ LR HSR+P+
Sbjct: 140 NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLEEIPHLKTLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L V + H NH E +++RL NA + LL+QSVLL+G
Sbjct: 200 VIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRLRNARVTLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + LA L I PYYLH D G +HF + ++ ++I+ L EK+SG
Sbjct: 260 VNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQAREIMQQLLEKVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PRLAREIGGERSKTPLDL 337
>gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
Length = 340
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ Q L I+ N + + N + NP+DP+ RQ +P EE
Sbjct: 23 AVSDPQILLQQLDIEPSSWTSGFSARNLFVQRVPQSFINRMEKGNPDDPLLRQVLPVIEE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ +P DP+ + + + G++H+Y +R+L+ + C + CR+CFRR +
Sbjct: 83 FDEVPGFSTDPL-EEQGNDVPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
A+AY+Q+ ++ EVI +GGDPL+ LQ +++ + + H++ LR H+R+P+
Sbjct: 140 GKSTWREAIAYLQQHPEVDEVILSGGDPLMAKDHELQWLIEAIESVPHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L L + + + H NH E +E A ++ L +AG+ LL+Q VLL+G
Sbjct: 200 VIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDELRAVMATLKHAGVTLLNQGVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND E L NL + I PYYLH D G +HF + E + +++ L +++SG
Sbjct: 260 VNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHFLVDDETARNLMSGLIKEVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D H
Sbjct: 320 PRLTREIGGRDSKTPLDLH 338
>gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
Length = 340
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFIDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YI + ++ E+I +GGDPL+ + L +++ + I H++ LR H
Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q
Sbjct: 195 SRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E++
Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338
>gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae
PittHH]
Length = 338
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
Length = 342
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 3/296 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L+ ++ L I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
Length = 340
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 93/324 (28%), Positives = 158/324 (48%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEQLEIDPTPWKNGFEARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFEVHQGYSNDPL-EEQNNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYDE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L YIQ+ +I E+I +GGDPL+ L ++ + I+H++ LR H
Sbjct: 137 NKG--SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARIADIQHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI +L L + V + H NH E + A+ +L G+ LL+Q
Sbjct: 195 SRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDKLKQVGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND L E + PYY+H D G +HF ++ ++ ++I+A + E+
Sbjct: 255 VMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQAKEIMAGVLEQT 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338
>gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96]
gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM
12163]
Length = 342
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 3/296 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L ++ +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
29909]
Length = 335
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + E + + + + +P+DP+ Q + +EE
Sbjct: 15 ITDPAELLRILSLNEHPNLQQGIEARRLFPLRVPRAFVARMRLGDPSDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FIAAPGFTTDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDELENIAHIKRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L + V + H NH E + ++++L AG+ LL+QSVLL+G
Sbjct: 192 VIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQLKRAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD E+LA L + I PYY+H D G +HF + +E + ++ L ++SG
Sbjct: 252 INDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARLLMKGLLCRVSGYLV 311
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 312 PRLAREIGGELSKTPLDL 329
>gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
Length = 428
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QLRH +L + D + ++ +++ TP A+L + I +
Sbjct: 53 WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLA-KGDAGQSIRQIL 110
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + E+ ++ DP+G+ + ++HRY DR+L + +C VYCRFC R+ G
Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTGQ 170
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ + + ++ E AL+YI+ + I EVI +GGDPL +S K+L +VL LR I+HV+I+R
Sbjct: 171 EQAFIRN-EEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
SR+P+V P R+ +L+Q LK+ KPV++ H NHP E + EA+ A+ RL + G+ +++Q
Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
VLL GIN+ P ++ L R + LR+KPYY+ D + GT H R ++E+ +I L
Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+SGL P LD+P G GK + + + + +Y
Sbjct: 349 LSGLAMPNLSLDIPNGGGKTYLVPNFEVGQEGRTRHYVGWDGVKAEY 395
>gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901]
gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901]
Length = 335
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 168/321 (52%), Gaps = 3/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL ++ +T DL + + + + + + + + ++ + + P +PNDP+ Q +
Sbjct: 17 QLTNQ-ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVL 75
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + P EDP+ + +P G++H+Y R+LL C + CR+CFRR
Sbjct: 76 PLGEEFAVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHF--DY 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +AALAYI+ + +I EVI +GGDPL+L K+L+ +L + I H+ +R H
Sbjct: 134 RQNTPSRTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIH 193
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R L++ L + + H NH E + A L AGI LL+Q+
Sbjct: 194 SRLPVVLPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQT 253
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK IND IL L + + + PYYLH D +GT+H+ + + +++ L ++
Sbjct: 254 VLLKNINDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQL 313
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + + PG K I
Sbjct: 314 PGYLVPTLVKEEPGAPSKTPI 334
>gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 340
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L N I ++ +++ + + NP DP+ RQ +P ++E
Sbjct: 23 AISDPLKLLNLLKIDPTPWEKGLAARKLFALRVPMSFVERMEVGNPYDPLLRQVLPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+L+ + C + CR+CFRR +
Sbjct: 83 FEVHAGYSTDPL-EEQDNDIPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +L YI ++ EVI +GGDPL+ L ++ + I H++ LR HSR+P+
Sbjct: 140 SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGIEQIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ P+L Q + V + H NH E + E A+ L +A + LL+Q VLLKG
Sbjct: 200 VLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQNLKHANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L NL + I PYYLH D G +HF + + + ++A L E +SG
Sbjct: 260 VNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQAKTLMAGLMENVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D H
Sbjct: 320 PQLTREIGGRSSKTPLDLH 338
>gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
Length = 340
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 3/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP+DP+ RQ +P ++E
Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPHDPLLRQILPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +LAYI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L +L + I+PYYLH D G +H+ + E ++++A L ++SG
Sbjct: 260 INDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDETARQLMAGLITQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLDL 337
>gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4]
gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4]
Length = 340
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 88/324 (27%), Positives = 162/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I + +S+ + + NP+DP+ RQ +
Sbjct: 19 QLSN-AISDPRKLLEVLEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CF R
Sbjct: 78 PLSEEFEVHQGYSADPLDEQGNA-IPGLLHKYKNRALMIVKGGCAINCRYCFSRHFPY-- 134
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L Y+ + +I EVI +GGDPL+ ++ +++ + +I H++ LR H
Sbjct: 135 QDNKGSKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAIEHIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI +L L+ + + + H NH E + E A +++L G+ LL+Q+
Sbjct: 195 SRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAKLKQVGVTLLNQA 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLK +ND E L + I PYYLH D G +H+ ++ + ++I+ + ++
Sbjct: 255 VLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQAKEIMRGVITRV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D +
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLN 338
>gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 338
Score = 387 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
Length = 340
Score = 387 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEQLEIDPTPWQQGFEARQLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ DP+ + + + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFDVKQGYSNDPLLEQ-DNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYQE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S + +L Y+Q++ +I EVI +GGDPL+ L+ +++ + IKH++ +R H
Sbjct: 137 NKG--SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERIADIKHIKRIRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI EL++ V + H NH E + E A +RL AGI LL+Q
Sbjct: 195 SRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATARLKLAGITLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND E L + I PYY+H D G +HF ++ E ++I+A L E++
Sbjct: 255 VMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHEAKRIMAGLLERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPTLTREIGGRSSKTPLDLH 338
>gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon]
Length = 515
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 121/317 (38%), Positives = 180/317 (56%), Gaps = 7/317 (2%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
S ++ +L + D K ++ Y + + P +LI D I +Q +P EL
Sbjct: 14 ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
E DP+ ++ SP+ G+VHRYPDR+LL + + C +YCRFC R+ VG +
Sbjct: 71 D-EEGVPDPLHEDKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KK 128
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ + YI+E I +V+ +GGDPL+L+ + L L+ L+ IKHV +LR +RVP
Sbjct: 129 EQVLQGIEYIREHEAIRDVLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCAL 188
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
PQRI L+ L+ P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+N
Sbjct: 189 PQRITDGLLSLLRRY-HPLYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVN 247
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D +++ L+R +R+ PYY++ DL GT HFR ++EG +I LK S L P
Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306
Query: 309 YILDLPGGYGKVKIDTH 325
+++D PGG GK+ I
Sbjct: 307 FVIDAPGGGGKIPITPE 323
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%)
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ LK+ P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP+++ L
Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKEL 438
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ ++LR+KPYYLH D + EEG I+ SL+ SG+ P I+
Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482
Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
K+ I + I + + + ++ + +YP
Sbjct: 483 DKI-ICPNYIVEKTSEKIMLKNYQGMTFEYP 512
>gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
35236]
Length = 284
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 3/286 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKSGCA 59
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V CR+CFRR + + AL YI++ ++ E+IF+GGDPL+ + L +L
Sbjct: 60 VNCRYCFRRHFPYQDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWLL 117
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ I H++ LR H+R+P+V P RI L Q L + V + H NH E + +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRNS 177
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF +
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVD 237
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
+E ++++ L ++SG P ++ G K +D I+
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQSESQ 283
>gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon]
Length = 515
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 121/317 (38%), Positives = 181/317 (57%), Gaps = 7/317 (2%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
S ++ +L + D K ++ Y + + P +LI D I +Q +P EL
Sbjct: 14 ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
E DP+ + SP+ G+VHRYPDR+LL + + C +YCRFC R+ VG +
Sbjct: 71 D-EEGVPDPLHEEKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KK 128
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ + YI+E+ +I +V+ +GGDPL+L+ L L+ L+ IKHV++LR +RVP
Sbjct: 129 EQVLQGIEYIREREEIRDVLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCAL 188
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
PQRI L+ L+ P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+N
Sbjct: 189 PQRITDALLSLLRRY-HPLYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVN 247
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D +++ L+R +R+ PYY++ DL GT HFR ++EG +I LK S L P
Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306
Query: 309 YILDLPGGYGKVKIDTH 325
+++D PGG GK+ I
Sbjct: 307 FVIDAPGGGGKIPITPE 323
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%)
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ LK+ P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP ++ L
Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKEL 438
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ ++LR+KPYYLH D + EEG I+ SL+ SG+ P I+
Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482
Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
K+ I ++I + + + ++ + +YP
Sbjct: 483 DKI-ICPNHIVEKTSEKIMLKNYQGMTFEYP 512
>gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 370
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 133/349 (38%), Positives = 192/349 (55%), Gaps = 5/349 (1%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +DL + + + + ++ + +LI+ ++P DPI Q
Sbjct: 19 WQADVRAGVRHVRDLDRL-PLSSAERAAAQAAAANHKVRAPKAYLDLIDWNDPADPIRAQ 77
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP +EL E +DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E +
Sbjct: 78 VIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQCAVYCRFCFRKESLT 137
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S G + + E ALAYI + +I EVI TGGDPL L K L ++ + I HV++LR
Sbjct: 138 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAEIRARIEAIAHVRLLR 196
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+RVP+ P RI P L+ L + V I H NH E ++ A L AG +LL+
Sbjct: 197 IHTRVPVALPSRITPGLVAAL-QGRLMVTIVTHFNHAREITQATETACRTLRQAGFVLLN 255
Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
QSVLLKG+ND E L L R L +KPYYLHH DLA G +H R TI +GQ + +L+
Sbjct: 256 QSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALAEALR 315
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
++SG+C P Y+LDLP G GKV I +++ ++ + V Y
Sbjct: 316 ARLSGICNPVYVLDLPEGGGKVPIGPCHVEGRDGENWRLRGLDGEVRAY 364
>gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
Length = 572
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 100/323 (30%), Positives = 163/323 (50%), Gaps = 3/323 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + ++L ++K + + + + I P +P+DP+ RQ
Sbjct: 252 WQTQLSGAIRDPRELCRRLGLEKRWWPGAETGHALFEVRVPEAYLARIRPGDPHDPLLRQ 311
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EE + P DP+ + H+P +G++H+Y R+LL C + CR+CFRR
Sbjct: 312 VLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACAINCRYCFRRHFPY 371
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ S L Y++ + I E I +GGDPL + ++L +++ L I H++ LR
Sbjct: 372 DEN--APSRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLVEQLEAIPHLKRLR 429
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI+ L+ L + +H NHP E E I A RL +AG+ LL+
Sbjct: 430 IHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDACRRLRDAGVTLLN 489
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD + L L E + PYYLH D G +HF + + + +V +++
Sbjct: 490 QSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEIDDDTARTLVDAMRR 549
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P + ++PG K I
Sbjct: 550 ELPGFLMPTLVREIPGEASKTPI 572
>gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
Length = 338
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031]
gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031]
Length = 338
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ L A + ++ ++ + + + + + NP DP+ Q +
Sbjct: 20 LKN-AISDPTLLLKALNLPEDDFEQSIAARKLFPLRVPQPFIDKMEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNTVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
Length = 333
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 4/321 (1%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
QL + L + ++ ++ +++ + A + + NDP+ Q
Sbjct: 13 WQLDLAQAFNDPVALLEYLELNPQEFEQAILARKLFAMRVPRPFAERMQKGDKNDPLFLQ 72
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 73 AMTSSAEFTQVEGFTKDPLDEQ-HSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR
Sbjct: 132 --EDVKSGKSAWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKITHVKTLR 189
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI +L ++ V + H NH E I++L A +ILL+
Sbjct: 190 IHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANEIDAVLANKIAKLKQADVILLN 249
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKG+ND L L + I PYYLH D G SHF + E I L++
Sbjct: 250 QSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVEGASHFFVEDEIAFSIYKELQK 309
Query: 300 KISGLCQPFYILDLPGGYGKV 320
SG P ++ K
Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330
>gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20]
gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047]
gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329
gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047]
Length = 338
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810]
Length = 338
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII]
gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 338
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + K+ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
Length = 338
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430]
gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946]
gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora
CFBP1430]
gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC
BAA-2158]
Length = 342
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 3/296 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ +++ + A + +P DP+ Q I ++E P DP+ + + S + G+
Sbjct: 46 DARRLFALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+I
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIL 162
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L + +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLM 222
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E E+ + L AG+ LL+QSVLL+ IND +LA L + I PY
Sbjct: 223 VTHINHAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPY 282
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
YLH D G +HF ++ E + IV L +SG P ++ G K +D
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338
>gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
Length = 340
Score = 385 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ L I + ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPAKLLEELEIDPTPWQSGFDARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE I DP+ + N+S + G++H+Y +R L+ + C + CR+CFRR +
Sbjct: 78 PLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYDE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ S + +L YIQ+ +I EVI +GGDPL+ + L ++ + I H++ LR H
Sbjct: 137 NKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIADIPHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI P L L+ + H NH E +E +++ L AG+ LL+Q
Sbjct: 195 SRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTLKRAGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND + L + + + PYY+H D G +HF ++ ++ + I+A + EK+
Sbjct: 255 VMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQAKIIMAGVMEKV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338
>gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 333
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPAALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
Length = 333
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 4/321 (1%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
QL + L + + ++ +++ + A + + NDP+ Q
Sbjct: 13 WQLDLAQAFNDPVALLEYLELNPREFEQAILARKLFAMRVPRPFAEKMQKGDKNDPLFLQ 72
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 73 AMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR
Sbjct: 132 --EDVKSGKTVWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKINHVKTLR 189
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI +L ++ V + H NH E ++ L +G++LL+
Sbjct: 190 IHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANKMAELKQSGVVLLN 249
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKG+ND L L + I PYYLH D G SHF + E I L++
Sbjct: 250 QSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVEDEVAFSIYKELQK 309
Query: 300 KISGLCQPFYILDLPGGYGKV 320
SG P ++ K
Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330
>gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
Length = 340
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L + E E +++ + + NP DP+ Q +
Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q
Sbjct: 81 VQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + A+ YI +I EVIF+GGDP++ +L+ L IKH+Q LR HS
Sbjct: 141 PG--NKVSWKQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIKHLQRLRIHS 198
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V P+RI E L + H NHP E E A+ +L A +ILL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQKLTEAKVILLNQSV 258
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +ND+P L L + I PYYLH D G SHF ++ E +I L+ S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDERALQIYRELQALTS 318
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 319 GYLVPKLAREIGGEPNKT 336
>gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
Length = 340
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I + +++ + + + NP+DP+ RQ +P ++E
Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFIDKMEIGNPHDPLLRQILPLEQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R+LL + C V CR+CFRR S
Sbjct: 83 FEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGKLKQANVTLLNQGVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L +L + I+PYYLH D G +HF + E ++++A L ++SG
Sbjct: 260 VNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDETARQLIAGLITQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K +D
Sbjct: 320 PKLTREIGGRASKTPLDL 337
>gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881]
gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881]
Length = 335
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 102/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + +T +L++ + + + + + + + +L+ NP+DP+ RQ
Sbjct: 14 WQRQQADLITDPAELFSQLALTPQDLPASLAAAGDFPLRVPRRYVDLMERGNPDDPLLRQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ EE + DP+ + +H+ + G++H+Y R LL + C V+CR+CFRR
Sbjct: 74 VLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 133
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
T LS K E AL ++ + I EVI +GGDPL L+++RL+++L L I H++ LR
Sbjct: 134 Q---THLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQLLDALAAIPHLRRLR 190
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR P+V P+R++ L L + +HANHP E S +A +AG+ LL+
Sbjct: 191 IHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALVARCRDWRSAGMTLLN 250
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL G+ND + LA+L + + PYYLH D G +HF + +++ A L+
Sbjct: 251 QSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFAVPDVIARELHADLRA 310
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P + PG K +
Sbjct: 311 RLPGFLVPRLTREEPGEPAKTVL 333
>gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
Length = 340
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I ++ +++ + + + NP DP+ RQ +P + E
Sbjct: 23 AISDPFLLLKTLKIDPTPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQILPLEPE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R L+ + C V CR+CFRR
Sbjct: 83 FEVHDGYSLDPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY--NDNKG 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+
Sbjct: 140 GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESISHIKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E ++E A+++L LL+Q VLL+G
Sbjct: 200 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNATLLNQGVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L +L I+PYYLH D G +HF + E ++++A L + +SG
Sbjct: 260 INDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTEARQLMAGLMQNVSGYMV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D H
Sbjct: 320 PKLTREIGGRASKTPLDLH 338
>gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21]
Length = 338
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
Length = 340
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 91/324 (28%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + ++ + L I E ++ + + + NP DP+ RQ +
Sbjct: 19 QLAN-GISDPEKLLLQLEIDPSPWQSGFEARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE ++ DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR ++
Sbjct: 78 PLSEEFDVHSGYSTDPLDEQDNQ-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYNE 136
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ +L Y+++ ++ E+I +GGDPL+ + LQ ++ + I+H++ LR H
Sbjct: 137 NKG--NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQIADIQHIKRLRIH 194
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P RI + L V + H NH E ++E A+S L G+ LL+Q
Sbjct: 195 SRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSSLRREGVTLLNQG 254
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
V+LKG+ND E L + + + PYY+H D G +HF ++ ++ ++I+A + E++
Sbjct: 255 VMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQAKQIMAGVIERV 314
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
SG P ++ G K +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338
>gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9]
gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 357
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 3/319 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ L I ++ +++ + + + NP DP+ RQ +P + E
Sbjct: 40 AISDPFLLLKTLKIDPIPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQVLPLEPE 99
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + G++H+Y +R L+ + C V CR+CFRR S
Sbjct: 100 FEVHDGYSLDPLKEQ-DNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYSDNKG-- 156
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+
Sbjct: 157 GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESIPHIKRLRIHTRLPV 216
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI EL + + + H NH E ++E A+++L + LL+Q VLL+G
Sbjct: 217 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNVTLLNQGVLLRG 276
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E L L + I+PYYLH D G +HF + E + ++A L + +SG
Sbjct: 277 INDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTEARHLMAGLMQNVSGYMV 336
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K +D H
Sbjct: 337 PKLTREIGGRTSKTPLDLH 355
>gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
Length = 348
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q L+ +T + L + + + + + + + + P +PNDP+ RQ
Sbjct: 26 WQRLQAAAITDPEVLIRRLGLDPALLPAARRAAELFRLRVPDGYLARMRPGDPNDPLLRQ 85
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E +P EDP+GD G++H+Y R+LL C V+CR+CFRR
Sbjct: 86 VLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACAVHCRYCFRRHFPY 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + +AAL YI I EVI +GGDPL LS +RL + L I HV+ LR
Sbjct: 146 GE--ANPARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLAGALGEIPHVRRLR 203
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR P++ P+R++ +L+ L+ + IHANH E A++RLA AG+ LL+
Sbjct: 204 VHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREALARLARAGVSLLN 263
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+NDD + LA+L T + PYYLH D G SHF++ + ++ L+
Sbjct: 264 QSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVDDDRALRLHHGLRA 323
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
++ G P + ++PG K +
Sbjct: 324 RLPGYLVPRLVREIPGQDAKSPLS 347
>gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
Length = 338
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LLK +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
Length = 309
Score = 382 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
A + K+ ++ +S+ + + I NP DP+ Q + E
Sbjct: 2 LKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFS 61
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
DP+ + N + + I+H+Y +R+L C V CR+CFRR + + K + A
Sbjct: 62 TDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLA 119
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
L YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+V PQRI
Sbjct: 120 LDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITD 179
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
E L E + H NHP E + A+ +L + LL+QSVLLKG+NDD +IL
Sbjct: 180 EFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSVLLKGVNDDAQIL 239
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
L + I PYYLH D G SHF ++ E +I +L+ SG P ++
Sbjct: 240 KILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIA 299
Query: 315 GGYGKV 320
G K
Sbjct: 300 GEPNKT 305
>gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 353
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 123/340 (36%), Positives = 187/340 (55%), Gaps = 10/340 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S L I + + + Y + +T +LI N DPIARQ IP EEL
Sbjct: 21 IISPDGLSRILPID---FQAMGKAAETYPMRITKYFLSLIREQN--DPIARQVIPSAEEL 75
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ DP+ + + SP+ G++HRYP +L ++ + C VYCR C R+ VG K ++
Sbjct: 76 SD-ASLSPDPLCEEDQSPVPGLIHRYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VT 132
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + YI+ +I EV+ +GGDPL++ +L +L+ LR I HV+ LR HSR+P V
Sbjct: 133 AEALAQGVDYIRSNQEIREVVLSGGDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGV 192
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI PEL + L + P+Y+ I NHP E + E+ A LA+ G+ L Q+VLLKG+
Sbjct: 193 LPQRITPELAKGLADF-HPLYMNIQFNHPREITPESEEACRILADQGVPLGCQTVLLKGV 251
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD +L LM + +R++PYYLH D G +HF + I G K++ +L+ I G P
Sbjct: 252 NDDEAVLRELMEELLRIRVRPYYLHQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIP 311
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
Y++DLPGG GK + +I + + + + Y
Sbjct: 312 HYVVDLPGGGGKAPL-PESIVGREENAILVRNFEGKIFRY 350
>gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20]
gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 333
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG
Sbjct: 256 GVNDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 333
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPTALLEYLELNPKEFETAITARKLFALRVPRPFVEKMRKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 79 EFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIEDRQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAKEPNKT 330
>gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 330
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 10/326 (3%)
Query: 2 QLRHKTLTSAQ-------DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
Q++ + LT DL + + +++ + + A + NPND
Sbjct: 5 QIKPRWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPND 64
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ Q + + E DP+ + SP I+H+Y +R+L L + C + CR+CFR
Sbjct: 65 PLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFR 123
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
R + + + L YI E ++ EVI +GGDPL+ + L +L L I H
Sbjct: 124 RHFPYEEVKS--GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISH 181
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
++ LR HSR+P+V P RI EL + L ++ V + H NH E +++L AG
Sbjct: 182 IKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAG 241
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
++LL+QSV+LKG+ND+ + L L E I PYYLH D AG SHF + E+ +I
Sbjct: 242 VVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIY 301
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKV 320
L+ SG P ++ K+
Sbjct: 302 RELQRITSGYLVPKLAREIAKEPNKI 327
>gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
Length = 350
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 4/327 (1%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q L + + L L ++ + +SI + + NPNDP+ R
Sbjct: 26 WQQILANSIDRPVELLERLGLCPEQWMAGADAGHLLFSIRVPEPFLARMEYGNPNDPLLR 85
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P +E L DP+ + + G++ +Y R LL + C + CR+CFRR
Sbjct: 86 QVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCRYCFRRHFP 145
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
++ L +D + L + +I EVIF+GGDPL + K L + K L I H++ L
Sbjct: 146 YDEQ--RLKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALEQIPHLRRL 203
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R H+R+P+V PQR+ L+Q ++ V + +H NHP E + + A+ RL AG+ LL
Sbjct: 204 RIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRLTEAGVTLL 263
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSV+L+G+ND ++L L + + PYYLH D AG HF + E + + L
Sbjct: 264 NQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEAKALTRELL 323
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH 325
E++ G P + +LPG K +D
Sbjct: 324 ERLPGFLVPRLVRELPGAGSKTPLDLE 350
>gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 367
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 132/349 (37%), Positives = 191/349 (54%), Gaps = 5/349 (1%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +DL + + + + H+ + +LI+ ++P DPI Q
Sbjct: 16 WQDDVRQGVRHVRDLDRL-PLSPVERAAAQAAAAHHKVRAPKAYLDLIDWNDPADPIRAQ 74
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP +EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E +
Sbjct: 75 VIPSPDELEEAEGELGDPIADHDFSPVPRLTHRHTDRVLLFPTYQCAVYCRFCFRKESLT 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S G + + E ALAYI + +I EVI TGGDPL L K L +++ + I HV++LR
Sbjct: 135 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPDKALAEIVARIEAIPHVRLLR 193
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+RVP+ P RI L+ L + V + H NH E + A + AG +LL+
Sbjct: 194 IHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHFNHAREITPATEVACRTMRQAGFVLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
QSVLLKG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+
Sbjct: 253 QSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 312
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
++SG+C P Y+LDLP G GKV + I+ ++ I + Y
Sbjct: 313 ARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREGDTWRIRGQDGAMRTY 361
>gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 333
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + + + +++ + A + + NDP+ Q +
Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG
Sbjct: 256 GVNDNVQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 333
Score = 380 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR
Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
Length = 338
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 155/318 (48%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+ +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S
Sbjct: 257 LLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++ G K
Sbjct: 317 GYLVPKLAREIAGEPNKT 334
>gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
Length = 339
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + NP DP+ Q + +E
Sbjct: 24 ISDPKILLQHLELPFEPFKQDIEARKLFAMRVPMPFVEKMEKGNPKDPLFLQVMSSADEF 83
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + N + + I+H+Y +R+L + C V CR+CFRR +
Sbjct: 84 LQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYEENKG-- 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI + +I EVIF+GGDPL+ L ++K L I H++ LR HSR+P+
Sbjct: 142 TKQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKHLENIPHLKRLRIHSRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI L L E + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 202 VIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + I L+ SG
Sbjct: 262 VNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALSIYKQLQRITSGYLV 321
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 322 PKLAREIGGEPNKT 335
>gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 429
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + + L + + + I+ +++ TP +L +P +PN PI + +
Sbjct: 47 QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 103
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 104 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 163
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R
Sbjct: 164 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 222
Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 223 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 282
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++
Sbjct: 283 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 342
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
KI G+ P ++ DLPGG GK+ + +
Sbjct: 343 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 373
>gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 420
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 114/331 (34%), Positives = 187/331 (56%), Gaps = 7/331 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + + L + + + I++ +++ TP +L +P +P+DPI + I
Sbjct: 36 QLQNR-VRGFE-LGRYFDLTESEKVGIEDTI-RLNVSATPYYISLTDPEDPDDPIRKMII 92
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P++ E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 93 PREAETVFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 152
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +++ +D EA YI+ +I +V+ +GGDPL LS ++ ++L+ L I+HV+I R
Sbjct: 153 KERMIT-EDLEACFEYIEACPEITDVVLSGGDPLNLSDSKIDRILERLEKIEHVKICRLG 211
Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P RI +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 212 TRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQFNHAKECTSEAKEAILKLLKAGVNVG 271
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLKGIND EI+ L + +ELR++ YY++ P+L G+ FR + +G +I++ ++
Sbjct: 272 NQCVLLKGINDSGEIMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIISYMR 331
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
KI G+ P ++ DLPGG GKV +
Sbjct: 332 GKIGGMGIPQFVNDLPGGGGKVTLTPDWYLG 362
>gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
56601]
Length = 416
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+++ + + L + + + I+ +++ TP +L +P +PN PI + +
Sbjct: 34 QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 90
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V
Sbjct: 91 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 150
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R
Sbjct: 151 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 209
Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ +
Sbjct: 210 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 269
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++
Sbjct: 270 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 329
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
KI G+ P ++ DLPGG GK+ + +
Sbjct: 330 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 360
>gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
Length = 343
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 2/316 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ ++L+N + K ++ + + + + + + + + +DP+ +Q +P +EL
Sbjct: 29 IRDPEELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQEL 88
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ P DP+ + + +P+ G++H+Y R+LL + C + CR+CFRR + S
Sbjct: 89 DLHPGFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQEN--NPS 146
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
++ + AL YI++ + I EVI +GGDPL + L+ + + I HV+ILR HSR+P+V
Sbjct: 147 QREWQQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVV 206
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
PQRI + L + IH+NHP E I A+ L G+ LL+Q+VLL GI
Sbjct: 207 IPQRITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGI 266
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+PE L L + + PYYLH D +G +HF +T ++++ L+ ++ G P
Sbjct: 267 NDNPEALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIP 326
Query: 308 FYILDLPGGYGKVKID 323
+ + G K+ I+
Sbjct: 327 KLVREQSGELSKMPIN 342
>gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 281
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 94/284 (33%), Positives = 153/284 (53%), Gaps = 3/284 (1%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+ P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C
Sbjct: 1 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCA 59
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ CR+CFRR + + AL Y+ + ++ E+IF+GGDPL+ L +L
Sbjct: 60 INCRYCFRRHFPYQDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLL 117
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDS 177
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF +
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVD 237
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
+E ++++ L ++SG P ++ G K +D ++
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 281
>gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
Length = 330
Score = 379 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + DL + + +++ + + A + NPNDP+ Q + +
Sbjct: 16 QAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPNDPLFLQAMSLQA 75
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E DP+ + SP I+H+Y +R+L L + C + CR+CFRR + +
Sbjct: 76 EFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFRRHFPYEEVKS- 133
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI E ++ EVI +GGDPL+ + L +L L I H++ LR HSR+P
Sbjct: 134 -GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLP 192
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI EL + L ++ V + H NH E +++L AG++LL+QSV+LK
Sbjct: 193 VVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAGVVLLNQSVMLK 252
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ + L L E I PYYLH D AG SHF + E+ +I L+ SG
Sbjct: 253 GVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYL 312
Query: 306 QPFYILDLPGGYGKV 320
P ++ K+
Sbjct: 313 VPKLAREIAKEPNKI 327
>gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
Length = 325
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGGYGKVKIDTHNI 327
P YILD P GK ++ +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319
>gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum
JF-5]
gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5]
Length = 325
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E
Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL
Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300
Query: 307 PFYILDLPGGYGKVKIDTHNI 327
P YILD P GK ++ +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319
>gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
HTCC2207]
Length = 341
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 166/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+++ + +TS L + + EQ+ ++ + +++ + + P NP DP+ Q
Sbjct: 20 WKVQLSQAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQ 79
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ P+ +DP+ ++ H+P+ GIVH+Y +R+LL + C + CR+CFRR
Sbjct: 80 VLPVAAEMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPY 139
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ S + + AL YI+ I EVI++GGDPL + L + + I H++ LR
Sbjct: 140 DENRQ--SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLR 197
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI+ + + +H NH E ++ AI +L AG+ +L+
Sbjct: 198 IHTRLPVVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLN 257
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND LA+L + + PYYLH D AG HF L +++ L+
Sbjct: 258 QSVLLRGINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQT 317
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ G P + ++P K I
Sbjct: 318 LLPGFLVPKLVREIPDRESKTLIS 341
>gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
FV-1]
Length = 315
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 4/304 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T +L + + + + + + + + P N +DP+ Q + +EE
Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P DP+ + S + G++H+Y +R LL + C V CR+CFRR
Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+
Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N+D ++LA L + I PYY+H D G +HF + +E +++ L ++SG
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEAGQLMKGLLSRVSGYLV 311
Query: 307 PFYI 310
P
Sbjct: 312 PRLT 315
>gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
phaeobacteroides BS1]
Length = 358
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 14/354 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+++ + S Q L + E+ I+ + +TP A+L++ +PN PI RQ I
Sbjct: 8 QMQN-LVDSVQKLEQYINVTDEERRTIESLDTK--WGVTPYFASLMDKDDPNCPIRRQVI 64
Query: 62 PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P +E + N S I +Y DRI ++ C +YCR CFR+E+
Sbjct: 65 PSMQEKVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKEL 124
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V Q + D + LA+I E +I +V+ TGGDPL+LS +L +++ LR I HV++
Sbjct: 125 VVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVEM 182
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+R SR+PIV PQRI L + + K PV+I NHP E +EE A+ L + GI
Sbjct: 183 IRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGIN 242
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
+ +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 243 VGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRD 302
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
+L+ +GL QP Y+ L GKV + + + + Y + +H P
Sbjct: 303 ALRGHTTGLAQPMYV--LATNIGKVPLMPDYYMIDKNDKEYELRNHTGKTTKIP 354
>gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 333
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ L + ++ + +++ + + + NDP+ Q + E
Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI +L L ++ V + H NHP E E +++L + ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQSKVVLLNQSVLLK 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 316 VPKLAREIAREPNKT 330
>gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
Length = 337
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
+DL N + ++ +++ + A + + DP+ Q I +EE +
Sbjct: 25 PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKGDRADPLFLQAITLQEEFTNV 84
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
+DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 85 DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ +L YI+ S++ EVI +GGDPL+ + + L I H+ +R HSR+P+V P
Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
RI EL + L ++ V + H NH E + + +L + ++LL+QSVLLKGIND+
Sbjct: 202 RITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ L L I PYYLH D AG SHF + +I L+ SG P
Sbjct: 262 AQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321
Query: 311 LDLPGGYGKV 320
++ K
Sbjct: 322 REMAKEPNKT 331
>gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 337
Score = 377 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L + E +++ E + + + + NP DP+ Q + ++E
Sbjct: 23 AISDPKILLETLNLPTENVEQDLEARRLFPLRVPLPFVEKMQKGNPQDPLFLQVMSFRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ +DP+ + + + ++H+Y +R+LL + C V CR+CFRR +
Sbjct: 83 FLQVEGFSKDPL-EEQDAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+
Sbjct: 140 NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNLENIPHLQRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + Q L E+ + H NHP E AI++L G++LL+Q+VLLKG
Sbjct: 200 VIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINKLREVGVLLLNQAVLLKG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ IL L I PYYLH D G SHF L I L+ SG
Sbjct: 260 INDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSRALNIYKELQSLTSGYLV 319
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 320 PKLAREIAKEPNKT 333
>gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
SH0165]
Length = 337
Score = 377 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
+DL N + ++ +++ + A + + DP+ Q I +EE +
Sbjct: 25 PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKEDRADPLFLQAITLQEEFTNV 84
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
+DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + +
Sbjct: 85 DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ +L YI+ S++ EVI +GGDPL+ + + L I H+ +R HSR+P+V P
Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
RI EL + L ++ V + H NH E + + +L + ++LL+QSVLLKGIND+
Sbjct: 202 RITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ L L I PYYLH D AG SHF + +I L+ SG P
Sbjct: 262 AQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321
Query: 311 LDLPGGYGKV 320
++ K
Sbjct: 322 REMAKEPNKT 331
>gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
Length = 339
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + NP DP+ Q + +E
Sbjct: 24 ISDPKILLQHLELPLESFKQDIEARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMSSADEF 83
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR +
Sbjct: 84 LQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPY--QDNKG 141
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI E+ +I EVIF+GGDPL+ L+ ++K L I H++ LR HSR+P+
Sbjct: 142 TKQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKHLENIPHLKRLRIHSRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E + A+++L + G++LL+QSVLLK
Sbjct: 202 VIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMAKLKDCGVVLLNQSVLLKN 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L KI L+ SG
Sbjct: 262 VNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDARALKIYKELQRISSGYLV 321
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 322 PKLAREIGGEPNKT 335
>gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
Length = 336
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+++ + L + ++ ++ +++ + + N DP+ Q + +E
Sbjct: 22 SISDPEVLLKTLSLPIDKFEKDIHARKLFAMRVPLPFVRKMELGNAQDPLFLQAMSSADE 81
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + I+H+Y +R+LL + C + CR+CFRR +
Sbjct: 82 FLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCRYCFRRHFPYADNQG-- 138
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI QI EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+
Sbjct: 139 NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKLEKIPHLQRLRIHTRLPV 198
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L E+ + H NH E E+ A+++L NAG++LL+QSVLLK
Sbjct: 199 VIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNKLKNAGVVLLNQSVLLKN 258
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L NL I PYYLH D G SHF + + +I L+ SG
Sbjct: 259 INDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQRAVEIYRELQSLTSGYLV 318
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 319 PKLAREIAHEPNKT 332
>gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
Length = 346
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + L Q L + + + +++ + + +P DP+ RQ +
Sbjct: 28 QLWRQALRDPQALLARLQLDPAALGVSEAAMAQFALRVPEGFVARMRKGDPADPLLRQVL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ P D +GD G++ +Y R LL C + CR+CFRR
Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRAIPHIRRLRIH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+
Sbjct: 206 TRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGIGAQLLNQA 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L +L + PYYLH D G +HF + + ++A L ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTRAKALIAGLTARL 325
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + +LPG K +
Sbjct: 326 SGYLVPKLVRELPGDPSKRPV 346
>gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
Length = 337
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L N + E ++ + + + + NP DP+ Q + +E
Sbjct: 23 AISDPKLLLNTLNLPAEAFEKDIVARRLFPLRVPLPFVQRMEKGNPKDPLFLQVMSSADE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ + + + ++H+Y +R+LL + C V CR+CFRR +
Sbjct: 83 FIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + AL YI + +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+
Sbjct: 140 NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNLENIPHLQRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI PEL + L E+ + H NHP E AAI +L AG++LL+QSVLLK
Sbjct: 200 VIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFKLKQAGVVLLNQSVLLKN 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +IL L + I PYYLH D G SHF + E+ I L+ SG
Sbjct: 260 INDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEKALNIYKILQSITSGYLV 319
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 320 PKLAREIAKEPNKT 333
>gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976]
gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976]
Length = 333
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 3/307 (0%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
L + ++ + +++ + + + NDP+ Q + EE +
Sbjct: 27 LLEHLELNPKEFETAITARKLFALRVPRPFVGKMRKGDKNDPLFLQAMSAAEEFLQMQGF 86
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + +
Sbjct: 87 VKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS--GKAVWQQ 143
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI
Sbjct: 144 GLDYIAAHTELEEVIFSGGDPLMAKDSELNWLISALEQIPHIKTLRIHTRLPVVIPSRIT 203
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+L L ++ V I H NHP E E + +++L A ++LL+QSVLLKGIND+ +
Sbjct: 204 EQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDRLNQLRQANVVLLNQSVLLKGINDNAQT 263
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
L L + + PYYLH D G SHF + ++ +I L+ SG P ++
Sbjct: 264 LKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVPKLAREI 323
Query: 314 PGGYGKV 320
K
Sbjct: 324 AREPNKT 330
>gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
atlantica T6c]
gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c]
Length = 341
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 4/326 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + L + + + + + + A I +PND + +Q
Sbjct: 16 WQKELSSAFSDPVALLKYLDLDPTEFIDDIAARRLFPMRVPLPFAARIKKGDPNDALFKQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P ++E DP+ + + G++H+Y R+LL + C V CR+CFRR
Sbjct: 76 VFPSEKEFLTDLNYVLDPLQEQQNEK-PGVLHKYKSRVLLLVRGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S L+ + + L YI++ I EVI++GGDPL+ L + + I H++ +R
Sbjct: 135 S--DNHLNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDFLAWLTDEIAEITHIKRIR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI P+LI+ + + +H NHP E + L AG+ LL+
Sbjct: 193 IHTRLPVVIPARITPQLIEWFTKTRLKPVMVLHINHPQEIDFALQEVLQELTKAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q VLLK IND ++ L + + PYYLH D G HF + + I+A + +
Sbjct: 253 QGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGAQHFDQDDKIAKDIMAKMIK 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
++ G P + ++ G GK ID +
Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338
>gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
Length = 337
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 3/323 (0%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q L + + L + + +D ++ S+ +S+ + + I P NP DP+ RQ
Sbjct: 16 WQHLLSNAIDDPKALLEHLNLPQNLLDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +EL + DP+ + + + G++H+Y R+LL L C + CR+CFRR
Sbjct: 76 VLPLNDELADVSGFVADPLAEMDANHSDGLIHKYKGRVLLILSGACAINCRYCFRRHFPY 135
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L S+ + L Y++ I EVIF+GGDPL S RL+++++ L I H+ LR
Sbjct: 136 QEN--RLGSEQWQQVLNYLKSDPTISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLR 193
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV PQR+ L+Q L+++ + +HANHP E + R+ ++ I +L+
Sbjct: 194 IHSRLPIVIPQRVTDRLLQILRDSRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLN 253
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND ++L L E I PYYL D G +HF + EE K+ ++
Sbjct: 254 QAVLLKGINDQVDVLQQLSEKLFEQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQA 313
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P ++PG K +
Sbjct: 314 VLPGYLVPKLAREIPGKTEKTLL 336
>gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
Length = 339
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 3/325 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +L + ++ + + + + + + N DP+ RQ
Sbjct: 17 WQQELARAVRDPAELLRLLELPATLLEPARRAARLFPLRVPRSYLARMERGNLEDPLLRQ 76
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL+ P DP+GD S G++H+Y R+LL C + CR+CFRR
Sbjct: 77 VLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCRYCFRRHFPY 136
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+Q +AL YI +++++ EVI +GGDPL L+ +RL +++ L I H++ LR
Sbjct: 137 AQANAAAG--QWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLVDIPHIRRLR 194
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P R+ EL++ + + +H NH E +A+ RL AG+ +L+
Sbjct: 195 IHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRLREAGVTMLN 254
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND+ L L + + I PYYLH D AG HF +T + +++ +
Sbjct: 255 QTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRARELHRQMAR 314
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
++ G P + ++ G GK +
Sbjct: 315 RLPGYLVPRLVQEIEGAPGKHWLPP 339
>gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
Length = 342
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q
Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR
Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ G P ++ ++PG K +
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327
>gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
Length = 345
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 114/331 (34%), Positives = 170/331 (51%), Gaps = 4/331 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + SAQDL + E ++ + + + I + + I P NP DP+ Q
Sbjct: 17 WQKQLSQAQISAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQ 76
Query: 60 FIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
P E P DP+ +N +P+ GIVH+Y R+LL + C ++CR+CFRR
Sbjct: 77 IWPFSAEGETPPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHFP 136
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LS + E AL YI+ I EVI +GGDPL + KRL K++ + I HV L
Sbjct: 137 YEDNNLSLS--EWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRL 194
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSR+PI P RI P+L Q L + + + +HANH E S++ +A++RL + I LL
Sbjct: 195 RIHSRLPITLPNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLL 254
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGIND + L +L + PYYLH D G H+ + + ++ L+
Sbjct: 255 NQTVLLKGINDTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQ 314
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
++ G P + ++PG K I T K
Sbjct: 315 AQLPGFLVPKLVREVPGEASKTLIYTQKPPK 345
>gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493]
gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331]
gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493]
gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331]
Length = 342
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q
Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR
Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIK 303
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ G P ++ ++PG K +
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327
>gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
Length = 342
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q
Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR
Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + +
Sbjct: 244 QSVLLKNVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ G P ++ ++PG K +
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327
>gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47]
Length = 381
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 177/319 (55%), Gaps = 4/319 (1%)
Query: 6 KTLTSAQDLYNANLIKKE--QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ + SA +L + D + + + + A + P +PNDP+ RQ +P
Sbjct: 65 RAIRSAGELRRYLNLDPPVGDPDGSDAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+PIV P R+ I+ ++ + ++ +H NHP E E AA+ RL +AGI +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGIPVLNQAVL 302
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362
Query: 304 LCQPFYILDLPGGYGKVKI 322
P ++ + G K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381
>gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334]
gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334]
Length = 342
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q
Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR
Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303
Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
+ G P +I ++PG K +
Sbjct: 304 HLPGYLVPKFIREIPGALSKTPLS 327
>gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
Y4.1MC1]
Length = 378
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 188/343 (54%), Gaps = 18/343 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP
Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + S
Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + YI + +I V+ TGGD LIL+ K+++++++ LR I HV+I+RF S+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSK 175
Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA A L +AG+I++
Sbjct: 176 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+E+ +IV K
Sbjct: 236 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAK 295
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ SGL + ++ + GK++I + NG + H
Sbjct: 296 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 332
>gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
2336]
Length = 337
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K ++ +L N + E + + + + NPNDP+ Q + +
Sbjct: 22 KAISDPIELLNCLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++
Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
IND+ IL L + I PYYLH D G SHF L E I L+ SG
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 319 VPKLAREIAHEPNKT 333
>gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 343
Score = 372 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + N DP+ Q + +E
Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR Q
Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + +I L+ SG
Sbjct: 266 VNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 326 PKLAREIGGEPNKT 339
>gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily
[Gallibacterium anatis UMN179]
Length = 332
Score = 372 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 99/294 (33%), Positives = 142/294 (48%), Gaps = 3/294 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++ + N + N NDP+ Q + E P +DP+ + + + +
Sbjct: 42 AARRLFAMRVPMPFINKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQ-DNAIPNL 100
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y +R+LL + C V CR+CFRR + L YI + S+I EVIF
Sbjct: 101 LHKYHNRVLLMVKGGCAVNCRYCFRRHFPYEANPG--NKASWRKTLDYIAQHSEIEEVIF 158
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ + L +L+ L I H++ +R HSR+P+V PQRI PEL + L ++ +
Sbjct: 159 SGGDPLMAKDRELAWLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVL 218
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H NH E E + L AG+ LL+QSVLLKGINDD IL L I PY
Sbjct: 219 VLHINHANEIDELLSRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPY 278
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YLH D G SHF + E I L SG P ++ G K
Sbjct: 279 YLHLLDKVEGASHFWIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKTWYS 332
>gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
Length = 358
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 101/354 (28%), Positives = 191/354 (53%), Gaps = 14/354 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ ++ + S + L + + + + IK + H TP A+L++ +P PI +Q +
Sbjct: 8 QITNQ-INSLEKLEEIINLTESEREAIKTLDTH--WGTTPYFASLMDKDDPECPIRKQVV 64
Query: 62 PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
P +E + ++ + N + I +Y DR+ + C +YCR CFR+E+
Sbjct: 65 PSLQESHNKYGMKDYLVWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKEL 124
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
V S + + + + +I++ ++ +V+ TGGDPL+LS ++++ ++++LR I HV++
Sbjct: 125 VVSHDLKL--DFNVDDGIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEM 182
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+R SR+PIV P RI L + L P+++ NHP E +++ A+ L +AG+
Sbjct: 183 IRIGSRLPIVLPHRITDNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVN 242
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
+ +Q+VLLKGINDD + + +L + + RI+PYYL + + A G HFR +E+G +++
Sbjct: 243 VGNQAVLLKGINDDVQTIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRD 302
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
L+ +GL QP Y+ + GK+ + + + Y + +H + + P
Sbjct: 303 GLRGHTTGLAQPMYV--IATNVGKIPLMPDYYMVDKDEEKYVLRNHRGELTEIP 354
>gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
Length = 379
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 18/343 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++KEI+N + + NLIN +PNDPI + IP
Sbjct: 4 QPKYITNIEKITQ---IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPN 60
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + +
Sbjct: 61 EGELNE--YGSWDASDEAANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVK 118
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + YI + +I V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S+
Sbjct: 119 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSK 176
Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA A L +AG+I++
Sbjct: 177 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 236
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+EE KIV K
Sbjct: 237 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAK 296
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ SGL + ++ + GK++I + NG + H
Sbjct: 297 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 333
>gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei
VT8]
gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 355
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 3/324 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
Q+ +++T+ + L + E + + I + I NP+DP+ RQ
Sbjct: 32 QILSQSVTTPEQLLERLGLAPEDWFRGAACGHRLFPIRVPEPYLARIEQGNPDDPLLRQV 91
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E I P+ DP+ + + G++ +Y R LL + C + CR+CFRR
Sbjct: 92 LPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCAINCRYCFRRHFPYG 151
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
L +D + + +I EVIF+GGDPL ++ + L + + L I H++ LR
Sbjct: 152 DH--RLGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQWAELLGDIPHLRRLRI 209
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
HSR+P+V PQR+ LI L + +H NHP E + A RL+ AG+ LL+Q
Sbjct: 210 HSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQAFRRLSEAGVTLLNQ 269
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+LKG+ND L+ L T E + PYYLH D +G HF ++ + +IV + E
Sbjct: 270 SVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSVSDTDAIRIVNEMLEN 329
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
+ G P + +LPG K +D
Sbjct: 330 LPGFLVPKLVRELPGRASKTPLDL 353
>gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
Length = 337
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K ++ +L N + E + + + + NPNDP+ Q + +
Sbjct: 22 KAISDPIELLNYLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++
Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
IND+ IL L + I PYYLH D G SHF L E I L+ SG
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318
Query: 306 QPFYILDLPGGYGKV 320
P ++ K
Sbjct: 319 VPKLAREIAHELNKT 333
>gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
alkaliphilus AHT 1]
Length = 371
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 109/355 (30%), Positives = 185/355 (52%), Gaps = 14/355 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q++++ + + + L + +E+ D I+ TP +L++ NP PI RQ
Sbjct: 6 WQMQNQ-VNTLEKLEEYIKVTEEEADAIRNCET--RWGTTPYFVSLMDKENPECPIRRQV 62
Query: 61 IPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
IP K E I DN+ I +Y DRI + + + C +YCR CFR+E
Sbjct: 63 IPSKHENVNEFGIENYLVYKENRDNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKE 122
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+V + + D + L ++++ ++ EV+ TGGDP +L +++ +++ LR + H++
Sbjct: 123 LVVDKSMQL--RFDVDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIE 180
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
++RF SR+PIV PQRI P L + L + K P+++ NH E +E AI L G+
Sbjct: 181 MIRFGSRLPIVLPQRITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGV 240
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ +Q+VL+KGINDD L + + +RI+PYY+ + + A G HFR +E+G +++
Sbjct: 241 NVGNQAVLMKGINDDEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIR 300
Query: 296 S-LKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
L+ SGL QP Y+ + GKV + + IK+ Y + +H P
Sbjct: 301 DTLRGHTSGLAQPMYV--IATNIGKVPLMPDYYIKEKNEKEYILQNHRGETTTLP 353
>gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris str. B100]
gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. campestris]
Length = 342
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + + ++L + + ++ + +++ + + P + DP+ RQ +
Sbjct: 24 QLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR ++
Sbjct: 84 PLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H
Sbjct: 144 E--TAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+R++ L+ L+ PV IHANH EF E AA+ L AG LL+Q+
Sbjct: 202 SRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDAEVDAALHALRGAGAQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATRL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + ++PG GK +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342
>gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 343
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
++ + L + E + E +++ + + N DP+ Q + +E
Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87
Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + + + I+H+Y +R+L + C V CR+CFRR Q
Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD IL L + I PYYLH D G +HF L + +I L+ SG
Sbjct: 266 VNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325
Query: 307 PFYILDLPGGYGKV 320
P ++ G K
Sbjct: 326 PKLAREIGGEPNKT 339
>gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 365
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 105/357 (29%), Positives = 179/357 (50%), Gaps = 16/357 (4%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + ++ +++ TP A+L++ +P PI +Q
Sbjct: 12 WQQQLANFVNTIERLEQYVNLTDDERQILEQNKTT--WGTTPYFASLMDADDPQCPIRKQ 69
Query: 60 FIPQKEELNILPEEREDPIG-----DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
IP E +D + D I +Y DR+ + C +YCR CFR
Sbjct: 70 VIPSSLEQQNT-YGMDDYLMWKENRDTEEQRPDSIARQYKDRVAFTVTQTCGIYCRHCFR 128
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+E+V T + + L +I + ++ +V+ TGGDPL+L +++ +++ LR I H
Sbjct: 129 KELVVDGDLTF--DFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERLRAIPH 186
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
+Q++RF SRVPIV PQRI PEL L P+++ NHP E +E A+ L
Sbjct: 187 IQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVYDLMTC 246
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G+ + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G ++
Sbjct: 247 GVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVEKGAEL 306
Query: 294 VA-SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
+ +L+ +GL QP Y++ GK+ + + I + Y + +H + P
Sbjct: 307 IRDALRGHTTGLAQPMYVV--ATNIGKIPLMPDYYIVDKDDEQYTLRNHKGQITHLP 361
>gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
tundripaludum SV96]
Length = 336
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 112/323 (34%), Positives = 172/323 (53%), Gaps = 3/323 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + +DL + + + + ++ + + A + NP+DP+ RQ
Sbjct: 15 WQQQLAEAFNNIEDLCRYLHLSPDDLPVSDIAAENFPLRVPLSFAACMEKGNPHDPLLRQ 74
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P KEEL P DP+GD + G++H+Y R+L C + CR+CFRR
Sbjct: 75 VLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCRYCFRRNFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ LS + +AA+ IQ+ I EVI +GGDPL+LS RL ++++ L IKH++ +R
Sbjct: 135 A--DLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLDGIKHLKRIR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P RI E I L ++ K + I +H NH E S+ IAA + L N+GI L +
Sbjct: 193 IHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASLKNSGITLFN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+G+ND+ E+L L I PYYLH D A GT HF ++ E ++ ++
Sbjct: 253 QSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEALALMHQVQA 312
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + + G K I
Sbjct: 313 ALPGYLVPKLVKEQAGATSKQTI 335
>gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999]
Length = 351
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 6/319 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S L N E + + +++ + +L+ ++ +DP+ +Q +P +E +
Sbjct: 30 SPDSLLNYLGFNASDFAEDHKARSLFALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIV 89
Query: 70 LPEEREDPI----GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
PE DP+ + ++ KG++H+Y +R+LL L C V CR+CFRR Q
Sbjct: 90 DPEFSLDPLKEQVNETTNTSTKGMLHKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN- 148
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ +D +I+ +I EVI +GGDPL+ + + + L I ++ +R H+R+P
Sbjct: 149 -NKQDWLDVFEHIKTDPKIDEVILSGGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLP 207
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P R+ PEL+ L ++ K + +H NHP E S E I ++ L AG+ +L+Q+VLLK
Sbjct: 208 VVLPYRVTPELLIALAQSSKQTIMVLHINHPKEISSELIQKVALLHEAGVTVLNQAVLLK 267
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND L RI+PYYLH D G +HF ++ + I+ + K SG
Sbjct: 268 GINDSAHTQIALNEALFSARIQPYYLHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYM 327
Query: 306 QPFYILDLPGGYGKVKIDT 324
P + ++ G K +D
Sbjct: 328 VPKLVREIGGESSKTPVDL 346
>gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
Length = 381
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 4/319 (1%)
Query: 6 KTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ + SA +L + + + + + + + A + P +PNDP+ RQ +P
Sbjct: 65 RAIRSAGELRRHLNLDLSAGESNGTNAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+PIV P R+ I ++ + ++ +H NHP E E AA+ RL +AG+ +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGVPVLNQAVL 302
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362
Query: 304 LCQPFYILDLPGGYGKVKI 322
P ++ + G K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381
>gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
MMB-1]
Length = 336
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 2/320 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +T +L + + + + + + + I N NDP+ Q +PQ +
Sbjct: 19 RAITQLPELLKELDLPADLAATHIGATKTFRLLVPRPYLSRIEKGNLNDPLLLQVLPQHQ 78
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL + +DP+ + NH+P K +VH+Y R+L+ +C V CR+CFRR
Sbjct: 79 ELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICAVNCRYCFRRHFPYGDNQ-- 136
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L+ + ++ + Y+ I EVI +GGDPL+L K L + +++L I H++ LR H+R+P
Sbjct: 137 LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAERVRSLESIAHLKRLRIHTRLP 196
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI+ ELI + ++ + + H NH E + +A+ RL G+ LL+Q VLLK
Sbjct: 197 VVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVESAMLRLKQIGVTLLNQGVLLK 256
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
+ND E +L ++ + PYY+ D AG +HF + IE+ Q+++ + +K+ G
Sbjct: 257 NVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDIPIEDAQRLMGEVTKKLPGYL 316
Query: 306 QPFYILDLPGGYGKVKIDTH 325
P ++PG K
Sbjct: 317 VPKLAKEIPGRASKTVFAPQ 336
>gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
Length = 346
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 169/323 (52%), Gaps = 3/323 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + +L + + + + SN + + + N + P P+DP+ RQ
Sbjct: 26 WQQQLSRAIRDPAELLERLQLPADLLPAARSASNDFPLLVPESFLNRMQPGEPDDPLLRQ 85
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P ++EL D +GD+ G++ +Y R L+ L C V+CR+CFRR
Sbjct: 86 ILPVEQELQPKQGFTTDAVGDDAARIAPGLLQKYHGRALMITLGTCAVHCRYCFRRHYPY 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S + + L I ++ + E++ +GGDPL+L+ +RL +++ L I H+Q LR
Sbjct: 146 --HDEPRSREQWQETLNVIADRPDLEEILLSGGDPLVLNDRRLGELIDDLAKIPHLQRLR 203
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P R+ + + L++ + +HANHP E + A++ RL+ AG +L+
Sbjct: 204 IHTRLPIVLPDRVTEQFLSLLQDTRLQPVVVVHANHPAEVVADCAASLKRLSRAGFPVLN 263
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + A L R + + PYYLH D G +HF G+ IV +LKE
Sbjct: 264 QAVLLRGVNDTVDTQAELCRRLINAGVLPYYLHQLDRIQGAAHFETDAALGKAIVQALKE 323
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P ++ ++ G K ++
Sbjct: 324 RLPGYAVPRFVREIAGEPSKTEM 346
>gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
Length = 346
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 16/332 (4%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQID----------EIKEISNHYSIALTPVIANLINPH 50
Q +++ ++L + E ++ ++ + + + +T A+ I P
Sbjct: 9 WQ----SISWQEELSSLITDPAELLERLELPESLLESAQKANKLFPLRVTQSYASRIKPG 64
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ +DP+ RQ +P EL DP+ + + +P G++H+Y R+LL C + CR
Sbjct: 65 DVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYHGRVLLISASQCAINCR 124
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFRR + S + + AL YI + I EVI +GGDPL +S +++Q ++ +
Sbjct: 125 YCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDPLAVSDRQMQWLVNQIA 182
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I HV LR H+R+P+V P RI EL+ L + I +H NH E E + L
Sbjct: 183 VIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHINHAAEIDEHVHNRLKIL 242
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
A I LL+QSVLLKG+ND L +L + I PYYLH D G +HF +
Sbjct: 243 KKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLLDKVTGAAHFDVDEASA 302
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ L + G P + ++P K +
Sbjct: 303 IALHNHLLATLPGYLVPKLVREVPNAASKTAV 334
>gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 351
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 113/340 (33%), Positives = 180/340 (52%), Gaps = 7/340 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + + + E+ + K++++ Y TP +L I R P E+
Sbjct: 12 VRNIESIEKFFPLTDEEKESFKKVTSIYPFLSTPYYLSLAVKS---CAIKRMIFPNIMEI 68
Query: 68 N--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ I + EDP+ + + HRYPDR+L+ + CP CRFC R+ +K
Sbjct: 69 SEAIQSKGEEDPLSEERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRNW-KKKTFF 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+S + E AL YI++ I +V+ +GGDPL L +RL+K+L L+ I HV+++R +R P
Sbjct: 128 ISDTEIENALNYIRKNENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAP 187
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ P R+ + + + E + V++ H NHP E +E + A+ L AGI + +Q+VLLK
Sbjct: 188 VTLPHRLLDDDLLEVLEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLK 247
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND +IL L R +++++PYYL H D G HF +I +G KI+ L ++IS
Sbjct: 248 GINDSADILEKLFRNLQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFA 307
Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
P+Y +D PGG GKV+I KK GN Y +
Sbjct: 308 IPYYAVDGPGGKGKVQILPDRYKKEGN-FYIFRSFNGETF 346
>gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
halophilus Nc4]
Length = 336
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 3/323 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + Q+L + + + + + + +PNDP+ RQ
Sbjct: 14 WQTELARAVRNPQELLALIGLNHHPQLAGEATRRQFPLRVPRGYIARMKKGDPNDPLFRQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR
Sbjct: 74 VFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCRYCFRRHFPY 133
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AL YI + EVI +GGDPL L+ RL ++++ L I HV+ LR
Sbjct: 134 ADH--NPAPSQWQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALAAISHVKRLR 191
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+R++ L+Q L+ + IHANH E + A+ L+ AG L +
Sbjct: 192 IHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGLSRAGCRLFN 251
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+GIND L +L + + + PYYLH D G +HF + Q + +L+
Sbjct: 252 QTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTAQCLHRTLRA 311
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P + +L G K+ +
Sbjct: 312 RLPGYLVPLLVQELAGAPSKLPL 334
>gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
succinogenes 130Z]
Length = 340
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 3/314 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ +L + + + + + + NP DP+ Q + +E
Sbjct: 26 AVSDPVELLKMLNLSAQFSKRDFAARKLFPLRVPIPFITKMEKGNPQDPLLLQVMLSHQE 85
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + P I+H+Y +R+L + + C V CR+CFRR +Q
Sbjct: 86 FLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCRYCFRRHFPYNQSQG-- 142
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + A+ YI E QI EVIF+GGDPL+ L ++K L I H+Q LR HSR+P+
Sbjct: 143 NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLETIPHLQRLRIHSRLPV 202
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ PQRI L + L+ + + H NHP E + A+ RL A + LL+QSVLLK
Sbjct: 203 MIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRLKQARVELLNQSVLLKN 262
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ +L L E+ I PYYLH D G +HF ++ E KI L+ SG
Sbjct: 263 VNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESAVKIYRDLQATTSGYLV 322
Query: 307 PFYILDLPGGYGKV 320
P ++ K
Sbjct: 323 PKLAREIANEPNKT 336
>gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
Length = 333
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 6/327 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q T+TS +L A + ID + + + + + NDP+ +Q
Sbjct: 11 WQNAFSDTITSFAELGQALDLP---IDSFDSQVGQFPLKVPRRFVQKMGKGDINDPLLKQ 67
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +E + DP+ + + +P+KGI+H+Y R+L+ + C V CR+CFR+
Sbjct: 68 VLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYCFRQHF-- 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + D +A AYI + EVI +GGDPL LS++RL ++ TL + V +R
Sbjct: 126 DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEALPQVHTIR 185
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+RVP++ P+R++ L+ + + + IHANHP E +E + + AG+ LL+
Sbjct: 186 IHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKKAGVTLLN 245
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLK INDD LA+L + + PYYLH D AG SHF ++ E+ + L
Sbjct: 246 QTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVALYWELLA 305
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
K +G P + +LP K +D +N
Sbjct: 306 KCAGYLVPKLVRELPNKPFKTPVDLYN 332
>gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
maltophilia R551-3]
Length = 346
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + L L + + + +++ + + + DP+ RQ +
Sbjct: 28 QLWRQALRDPHALLARLQLDPAALGVSDQAMAQFALRVPEGFVARMRKGDAADPLLRQVL 87
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE+ P D +GD G++ +Y R LL C + CR+CFRR
Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRQIPHIRRLRIH 205
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+
Sbjct: 206 TRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQA 265
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND + L +L + PYYLH D G +HF + + + ++A L ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQAKALIAGLTARL 325
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P + +LPG K +
Sbjct: 326 SGYLIPKLVRELPGDPSKRPL 346
>gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 340
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 164/325 (50%), Gaps = 4/325 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + S +L + + + E + + + A + P + DP+ RQ
Sbjct: 16 WQRELAEAYRSPVELLTDLQLDPAEFGQGLEARRLFPMLVPKAFAAAMRPGDAQDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +E + DPIG+ P+ G++H+Y R+LL L C V CR+CFRR
Sbjct: 76 VLPVGDEFLVADGFGPDPIGEQ-DGPMPGLLHKYQSRVLLMLRTGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + + A YI ++I E++ +GGDPL+ L +++ + H++ LR
Sbjct: 135 ADH--KVGAAELAQAHEYIASDTRINELLLSGGDPLMARDDHLAELVARFSDLPHLKRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P RI +L+ L +A V + +H NHP E E +A ++RL AG+ LL+
Sbjct: 193 IHTRLPVVLPSRITDQLVSLLADAPWRVVMVLHINHPNELQPELVAGLARLKAAGVTLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+ND + L L + + PYYLH D AG +HF + + + ++A +
Sbjct: 253 QAVLLKGVNDHADTLVALAEGLFDAGVLPYYLHLLDRVAGAAHFEVDEDRARALMAEQLQ 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
++ G P + ++ G K ID
Sbjct: 313 RLPGFLVPRLVREIAGEASKTPIDL 337
>gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
DSM 11293]
Length = 374
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 193/361 (53%), Gaps = 16/361 (4%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIA 57
Q L+ + +T+ +L ++ E+ E ALT +L+ +P P+
Sbjct: 14 WQRELKER-VTNLDELERHLCLEDEERAWFDSEEERRLPFALTRHYLSLM-GDDPASPLR 71
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP+KEE + L E DP+ + +SPL ++HRY DR L C +YCR CFRR
Sbjct: 72 RQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCRHCFRRHF 131
Query: 118 VGS---QKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
G V + KD + A Y++++ +I E++ +GGDPL+L L +++
Sbjct: 132 TGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDGTLFRLID 191
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
R + ILR +R+P V P RI P L + L P+++ NHP E S A+ A+
Sbjct: 192 LFRKHRPDLILRIGTRMPAVLPSRITPVLARELGR-RAPLFVVCQFNHPDEVSPPAVEAL 250
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
+RLA++GI +L+QSVLL+G+NDD E L L + R+ PYYL DLAAGTSH R I
Sbjct: 251 ARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAAGTSHLRAPI 310
Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+G I+ SL++ +SGL P Y +DLPGG GKV I + +V + N + Y
Sbjct: 311 LKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLPGPDNRLWPY 370
Query: 348 P 348
P
Sbjct: 371 P 371
>gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
Length = 340
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 164/318 (51%), Gaps = 2/318 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q + LTS +L + K + E ++ + + + I N +DP+ Q +
Sbjct: 14 QHLSQALTSLPELIEHLGLPKNLAQQGIEAHQNFKLLVPRPYLSRIEYGNVHDPLLLQVL 73
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ + +DP+ + +H+P K IVH+Y R+L+ C V CR+CFRR +
Sbjct: 74 PSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCRYCFRRHFPYAD 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
L+ + ++ + Y+++ +I EVI +GGDPL++ L ++ L + ++ LR H
Sbjct: 134 NQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLEALPQIKRLRIH 191
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P R+ ++++ +K + + + H NH E EE A +L +AG+ LL+Q
Sbjct: 192 SRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKLKSAGVTLLNQG 251
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND E NL I PYY+ D G +HF + IE+ Q+++ + ++
Sbjct: 252 VLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDAQELMGKVAAEL 311
Query: 302 SGLCQPFYILDLPGGYGK 319
G P ++PG K
Sbjct: 312 PGYLVPRLAKEIPGKPAK 329
>gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila
RKU-1]
gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1]
Length = 365
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 109/329 (33%), Positives = 183/329 (55%), Gaps = 19/329 (5%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ + +K I Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +PEL++ +++ K +Y+ NHP E +EEAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GIND PE L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AVLCNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
ISG+ + Y+ + GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317
>gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
Length = 337
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 164/317 (51%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++ + L + + + + + + + NP DP+ Q +P+++E
Sbjct: 23 AISDPRKLLFILELPEVSFQSDFAARQLFPMRVPQSFVDRMEKGNPKDPLFLQVMPKQQE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ ++ + + G++H+Y +R+L + C + CR+CFRR
Sbjct: 83 FIQQAGFIKDPLDEHE-AVVPGLLHKYTNRVLFIVRGGCAINCRYCFRRHFPYQDNSN-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + A+ YI+ K +I EVIF+GGDPL+ + ++L ++ L I H++ LR H+R+P+
Sbjct: 140 NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLEQIPHLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ EL+ LK++ + +H NHP E + E AA+++ AGI L +Q+VLL
Sbjct: 200 VMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKFTTAGISLYNQAVLLAD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L L + RI+PYYLH D G SHF + E+ I+ L ++ G
Sbjct: 260 INDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKAVAIMNELLLRLPGFLV 319
Query: 307 PFYILDLPGGYGKVKID 323
P + ++ G K I
Sbjct: 320 PKLVREIGGEKSKTPIS 336
>gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125]
gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125]
Length = 393
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 113/349 (32%), Positives = 187/349 (53%), Gaps = 18/349 (5%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K + + + I KE+ +++K+I++ + + +LI+ ++PNDPI + IP
Sbjct: 3 QPKYIMNVDKIEQ---IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ EL+ R D ++ + + G H+Y LL VC YCR+CFR+ + +
Sbjct: 60 EGELSE--YGRWDASDEDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S D + L YI + QI V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R S+
Sbjct: 118 EAMS--DVDPGLDYIAQTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSK 175
Query: 184 VPIVDPQRINPE--LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+P+ +P RI + L++ ++E +YI H NHP E + EA A L +AG I++
Sbjct: 176 LPVFNPMRITEDEQLLELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVV 235
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+ +LKGINDDP++LA L+ + PYY AG + F LT+EE IV K
Sbjct: 236 NQTPVLKGINDDPDVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAK 295
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
K SGL + L + GK+++ + +G + H + +Y
Sbjct: 296 AKTSGLGKRVR-LSMSHTSGKIEV-----LAIEDGKAYLKYHQSRDGNY 338
>gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 345
Score = 367 bits (944), Expect = e-99, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%)
Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T L + + K ++ + + + + A + P +P DP+ Q + +E
Sbjct: 23 ITDPLALLSFLKLDKNIKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
DP+ + + L G++H+Y +R+L+ + C V+CR+CFRR
Sbjct: 83 FVHTSGFSADPLCEQA-AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + E YI++ +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+PI
Sbjct: 140 SQVNREQVFNYIRKHTELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + + + + H NHP E + ++ RL AG+ LL+Q+VLLK
Sbjct: 200 VIPSRITTRLCESFSNSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKD 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+N++ EILA L I PYYLH D G +HF + E ++I+ +L ++SG
Sbjct: 260 VNNNAEILAQLSNRLFNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLV 319
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++ G K+ ID
Sbjct: 320 PRLTREVAGQPSKIPIDLQ 338
>gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H]
gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea
34H]
Length = 342
Score = 367 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%)
Query: 1 MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + T + L I + + + + + + + + +DP+ +Q
Sbjct: 20 WQKDLRDVVTEPEKLLTLLNIAPDDYLQHFKARKLFPVRVPLSFIKRMKKGDFDDPLLKQ 79
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E + DP+ ++ + +G++H+Y R+L+ + C + CR+CFRR
Sbjct: 80 VMPLSSEFLLSDGYTADPLNEH-DTVAEGLLHKYKSRVLMIVKTACAINCRYCFRRHFPY 138
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + K ++AL YI ++I EVIF+GGDPL+ + L +++ + I HV LR
Sbjct: 139 --QDNSPNKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQIPHVSRLR 196
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P RI +L+ LK + + +H NHP E ++E I A+ L A I L +
Sbjct: 197 IHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLREARIPLFN 256
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GINDD ++L NL + I+PYYLH D G +HF + + IV ++
Sbjct: 257 QSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVAIVKTMLA 316
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
+ G P + ++ G K I+
Sbjct: 317 SLPGFLMPKLVREIAGQANKTPINL 341
>gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707]
gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27]
gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707]
gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27]
Length = 335
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + Q+L + + + + + + +PNDP+ RQ
Sbjct: 14 WQAALSQAVRNPQELLELTGLDNHPQIASEATRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR
Sbjct: 74 VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR
Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+R++ L+Q L+ + IHANH E + AA++ L+ AG L +
Sbjct: 192 IHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDLSRAGCRLFN 251
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+GIND L++L + + PYYLH D G +HF + I Q++ +L+
Sbjct: 252 QTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITAQRLHRTLRA 311
Query: 300 KISGLCQPFYILDLPGGYGKVK 321
++ G P + + G K+
Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333
>gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5]
gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5]
Length = 335
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 5/327 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +TS +L ++ + + + H+ + + + + +DP+ RQ
Sbjct: 11 WQTQLSEAITSIDELLEILELQSLRSEVY--VPKHFELRVPRAFVAKMTVGDRDDPLLRQ 68
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +E + DP+ +N H+P+KG++H+Y R+LL + C ++CR+CFR+
Sbjct: 69 VLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYCFRQHFDY 128
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S S+K + + YI +I EVI +GGDPL ++++RL L TL I + +R
Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAIGQLTTIR 186
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P R++ L++ L ++ + + IH NH E + R AGI LL+
Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARAAGITLLN 246
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND L + + PYYLH D AG +HF E ++ SL
Sbjct: 247 QAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIELYWSLLA 306
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
K+ G P + +LP KV I+ +N
Sbjct: 307 KLPGYLVPKLVRELPNEPFKVPINVYN 333
>gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73]
gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans]
Length = 315
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 2/317 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ +L + + + E + +++ + + +P+DP+ RQ +P EL
Sbjct: 1 MRDPHELLALLGLDPQGLGISTEAATQFALRVPRGFVARMRHGDPHDPLLRQVLPLDAEL 60
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +P D +GD G++H+Y R LL C V+CR+CFRR +++ +
Sbjct: 61 HRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCRYCFRRHFPYAEE--SAA 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
A+A I I EVI +GGDPL L+ +L ++ + L + ++ LR HSR+P+V
Sbjct: 119 RDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALTALPQIKRLRLHSRLPVV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+RI+ L+ L+ P+ + IHANH EF AA++RL +AG LL+Q+VLL+G+
Sbjct: 179 LPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARLRDAGAQLLNQAVLLRGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND E LA L + PYYLH D G +HF + + +L ++SG P
Sbjct: 239 NDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATALDLHRALASRLSGYLVP 298
Query: 308 FYILDLPGGYGKVKIDT 324
+ ++PG K +
Sbjct: 299 KLVREIPGDSSKRPLMP 315
>gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
ATCC BAA-548]
Length = 341
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 4/306 (1%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
E E++ + Y + L LI+P + NDPIARQ +P +EL L DP+ +
Sbjct: 17 EITPEMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADLSS-SYDPLAEE 75
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQE 140
P ++HR+ DR++L C + CRFCFR+ + LS + A+ Y+
Sbjct: 76 EQMPTPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTA 135
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ EV+ +GGDPL+L RL+ ++ + + +Q++R SR+P+V P+R+ E+ +
Sbjct: 136 HPAVKEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYF 195
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
++ A H NHP E + EA AA RL AG+ +++QSVLLKG+NDD E+L L R
Sbjct: 196 GSIP-GLWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRK 254
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
V +R+KP+YL H D G HF +E+G +I+ + + ++S L P + +DLP G GKV
Sbjct: 255 LVAIRVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKV 314
Query: 321 KIDTHN 326
+
Sbjct: 315 ALQPEY 320
>gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
Length = 341
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66
+ + + L LI + D + ++ + I+L+P VI N+ P I +Q++P KEE
Sbjct: 4 IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L I EE DPIGD +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q +L
Sbjct: 59 LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E AL YI+E+ ++WEVI TGGDPL LS +L +L L I HV+++R H+R+P+
Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P++I+ EL++ L + K +Y+ +H N E S+ I +L+ AGI LLSQSVLLK
Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND E L L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q
Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296
Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
P Y+LD+PGG GKV I+ + ++ I H+ DY
Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337
>gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15]
Length = 346
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
QL +TS ++L + +E + ++ + I + N + NP DP+ RQ
Sbjct: 23 QLLSGAVTSPKELLRRLELPEEPWLAGAEQGHRLFQIRVPEPFLNRMEKGNPADPLLRQV 82
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E P DP+ ++ G++ +Y R LL + C + CR+CFRR
Sbjct: 83 LPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQCAINCRYCFRRHFPYD 142
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
++ LS D + + + +I EVIF+GGDPL ++ + L + + I H++ LR
Sbjct: 143 EQ--RLSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQWASAISGIPHIRRLRL 200
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V PQR+ EL++ L V I +H NHP E A+ L AG LL+Q
Sbjct: 201 HTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTRRALGYLRAAGATLLNQ 260
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SV+L+G+ND +L L T + + PYYLH D G HF ++ +E + +V L +
Sbjct: 261 SVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFDVSDDEARNLVRELLAR 320
Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
+ G P + + PG K I+
Sbjct: 321 LPGFLVPKLVREEPGKESKTPINL 344
>gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
Length = 340
Score = 364 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q + +T ++L + EQ+ S + + + + NP DP+
Sbjct: 11 WQSQLSDLITDPRELLEVLQLAPEQLLSGAILASEQFKLRVPRAFVGKMQVGNPLDPLLL 70
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL P DP+G+ + G++H+Y R LL L C V+CR+CFRR
Sbjct: 71 QVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFP 130
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++D Y++ + I EVI +GGDPL LS+++L+ ++ L + H++ L
Sbjct: 131 YQEN--LPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLESVPHLKFL 188
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSRVPIV P R++ EL+ LK + + + +H+NH E + +++L I +L
Sbjct: 189 RIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQLVQQQITVL 248
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL G+ND ++L +L + + PYYLH D G HF L + +I +
Sbjct: 249 NQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHINEIYTEVL 308
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ G P + ++ G K +
Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332
>gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
Length = 335
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 3/323 (0%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + +L A + + +D I + +++ + NP DP+ Q
Sbjct: 14 WQSILQTAIRDSAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARMEYGNPKDPLLLQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +EE+ DP+ + +P+ GI+H+Y R+LL C V CR+CFRR
Sbjct: 74 VLALQEEIAPNAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRH--N 131
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+L+ AL Y++ + I EVI +GGDPL+ S ++L +++ L I H+Q LR
Sbjct: 132 DYAQNILTPARLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLR 191
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV PQRI EL Q L ++ V + +H NHP E E A+++L GI LL+
Sbjct: 192 IHTRLPIVIPQRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLN 251
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLK IN+ L L ++ + PYYLH D G +HF + + +++ +L+
Sbjct: 252 QTVLLKNINNCAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQA 311
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P + ++PGG K I
Sbjct: 312 RLPGYLVPKLVSEIPGGASKTLI 334
>gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
C-113]
Length = 335
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + Q+L + + + + + + +PNDP+ RQ
Sbjct: 14 WQTALSQAVRNPQELLVLTGLDTHPQIASETTRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR
Sbjct: 74 VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR
Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+R++ L+Q L+E + IHANH E + AA++ L++ G L +
Sbjct: 192 IHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDLSHVGCRLFN 251
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+GIND L++L + + PYYLH D G +HF + + Q++ +L+
Sbjct: 252 QTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSAQRLHRTLRA 311
Query: 300 KISGLCQPFYILDLPGGYGKVK 321
++ G P + + G K+
Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333
>gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 339
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 5/319 (1%)
Query: 8 LTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ +L + +++ + IK + + + +P DP+ RQ + E
Sbjct: 23 ITNPMELLQQLKLDQDKKLREAIK-ARQLFPFRVPKTFVKRMKYEDPTDPLLRQVLTLPE 81
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E + +DPI + ++ ++H+Y +R +L + C + CR+CFRR +
Sbjct: 82 EFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCRYCFRRYFPYQDNQS- 140
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + + A+ YI++ S++ E+I +GGDPL+ L K+L L I H+ LR HSR+
Sbjct: 141 -NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLEDIPHLTKLRIHSRLL 199
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P RI + Q L + V + H NH E +I++L N + LL+QSVLL+
Sbjct: 200 IVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKLRNKQVTLLNQSVLLR 259
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+ +ILA L T + I PYYLH D G +HF + + +KI+ L K++G
Sbjct: 260 GINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRARKIMHDLLSKVAGYL 319
Query: 306 QPFYILDLPGGYGKVKIDT 324
P + D+ G K +
Sbjct: 320 VPRLVRDISGMPSKTILSL 338
>gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
Length = 348
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 4/336 (1%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q K T ++L A + E + +++ + + + NDP+ RQ
Sbjct: 16 WQFELKQAYTQPEELLRALKLDPALFSEDIKARKLFAMRVPKPFVAQMQVGDSNDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E P DP+ + P+ G++H+Y R+LL L C V CR+CFRR
Sbjct: 76 VLPLHNEFESEPGYSTDPLQEQQG-PVNGLLHKYKSRVLLILQGGCAVNCRYCFRRHFPY 134
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ S + L YI++ +I EVI +GGDPL+ +RL+ ++ + + LR
Sbjct: 135 DE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFELLPQLTRLR 192
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P R+ +L + L + + +HANH E S E A+ +AGI LL+
Sbjct: 193 IHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDWHHAGIHLLN 252
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL G+ND+ L L R+ PYYLH D G SHF ++ E+ Q + +
Sbjct: 253 QSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKAQALWQKMTH 312
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
++ G P + + G K I +
Sbjct: 313 ELPGFLVPRLVREEAGELSKTAIMPDGTNTLTEEKL 348
>gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 357
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 111/340 (32%), Positives = 182/340 (53%), Gaps = 13/340 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + L + I ++ I + TP A+L++P +P PI RQ +P +E
Sbjct: 12 VNTREKLADYVDITPDEDAAI--TTMRTRWGTTPYFASLMDPQDPACPIRRQVVPSLKEK 69
Query: 68 NILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
++ I N + I +Y DRI + VC YCR CFR+E+V Q
Sbjct: 70 ENKYGIQDYLIHKENRAVGEKRPDCIARQYQDRIAFTVTDVCANYCRHCFRKELVVDQGL 129
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++ D + L +I+E ++ +V+ TGGDP ILS ++L +++ LR I HVQ++RF +R
Sbjct: 130 SL--RFDVDEGLGWIREHPEVRDVLITGGDPFILSDEKLGRIITELRRIPHVQMIRFGTR 187
Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
PIV P RIN EL + L + PV+I NH E +EE + L G+ + +Q+V
Sbjct: 188 TPIVLPSRINKELCEILGDFHRVPVWINTQCNHAREITEETARGVYDLMRCGVNVGNQAV 247
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL-KEKI 301
LLKGINDDP+ L + + +RI+PYY+ + + A G HFR +E+G +++ +
Sbjct: 248 LLKGINDDPQSFRELHQKLLTVRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHT 307
Query: 302 SGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDH 340
+GLCQP Y+ + GKV + + +K+ + Y + ++
Sbjct: 308 TGLCQPMYV--IATNIGKVPLMPDYYLKEKTDEEYVLRNY 345
>gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)]
Length = 371
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 5/327 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + +T L + I I + + + + +P DP+ Q
Sbjct: 47 WQTQVADVITDIDQLLAILELSD--IKSELYIPKGFGLRVPKAFVAKMKKGDPKDPLLLQ 104
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P K E + DP+ +N +P+KG++H+Y R+L+ + C ++CR+CFR+
Sbjct: 105 VLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCRYCFRQHF-- 162
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+G + S+ E YI + +I EV+ +GGDPL LS++RL L L + + +R
Sbjct: 163 DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALEALPQISTIR 222
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+R++ EL+ L+ + + + +H NH E E + + GI LL+
Sbjct: 223 IHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQARQKGITLLN 282
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL GIND + +L + PYYLH D G +HF +T ++ + +
Sbjct: 283 QTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRAVELYWEMLQ 342
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
++ G P + +LP K +D +N
Sbjct: 343 QLPGYLVPKLVQELPNRPFKTPVDLYN 369
>gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380]
gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 376
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 103/342 (30%), Positives = 178/342 (52%), Gaps = 17/342 (4%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K +T+ + N +++ ++K + Y+ +LI+ ++P DPI R IP +
Sbjct: 5 KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL P D G++ +S G+ H+YPD +L + VC CRFCFR+ + V
Sbjct: 65 ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+D A LAYI++ ++I V+ TGGDPL+LS ++L ++++ LR I+HV+I+R S++P
Sbjct: 123 A--RDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180
Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+P RI +PEL++ K +P +Y+ NHP E + EA A+ + +G+ ++ Q
Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ +++G+ND E+L L + + PYY+ G + + + IEEG I A +
Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300
Query: 301 ISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
SGL + Y L GK+++ + + H
Sbjct: 301 CSGLARRCRYT--LSHATGKIEV-----AGLTDDQVFFRYHR 335
>gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8]
gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 368
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 107/327 (32%), Positives = 182/327 (55%), Gaps = 15/327 (4%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+ K TS + + E+ + +K + Y +LI+ +P+DPI + +
Sbjct: 3 RLKVKYYTS---ITQVEQLSPEERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIV 59
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + +
Sbjct: 60 PEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINV 117
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 118 GAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIG 175
Query: 182 SRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
S++P +P RI +P+L++ +++ K +Y+ NHP E + EAI A++ L +AG +
Sbjct: 176 SKIPAFNPYRIIDDPDLLKMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAV 235
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 236 LCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTK 295
Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322
ISG+ + Y+ + GK++I
Sbjct: 296 AISNISGVAKRVRYV--MSHRTGKIEI 320
>gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath]
gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus
str. Bath]
Length = 323
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 2/295 (0%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
E + + + A + P +P DP+ RQ +P +EL DP+GD + G
Sbjct: 31 AEAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPG 90
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++H+Y R LL C V+CR+CFRRE + + + + +AAL YI ++ E+I
Sbjct: 91 LLHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEII 148
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+GGDPL+LS RL ++ K L I H++ LR HSRVP+V P RI+ L++ L
Sbjct: 149 LSGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTV 208
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ IHANHP E E ++ ++ + AG+ LL+QSVLL+ +ND L L E + P
Sbjct: 209 VVIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLP 268
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
YYLH D GT+HF + E + + +L+ ++ G P + ++ G K+ +
Sbjct: 269 YYLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEGKPYKLPVS 323
>gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
Length = 337
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 3/317 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L + + + + + + + + + + NDP+ Q +P+ +E
Sbjct: 21 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPVPFIKKMRKGDANDPLLLQVMPRHQEF 80
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+DP+ + ++ GI+H+Y R+L+ C V CR+CFRR + L+
Sbjct: 81 LKKSGFNKDPLLEQDNDQ-PGILHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 137
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K AL YI+ + I EVI +GGDPL+ + L L + ++ +R HSR+P+V
Sbjct: 138 KKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDELEKLPQIKRMRIHSRLPVV 197
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P RI EL L+++ + H NH E E AA+ +L +AG++LL+Q+V+LK +
Sbjct: 198 IPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQKLKHAGVMLLNQAVILKDV 257
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P
Sbjct: 258 NDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQAIKIMAELLKALPGFLVP 317
Query: 308 FYILDLPGGYGKVKIDT 324
+ ++ G K ID
Sbjct: 318 KLVREIGGQKSKTPIDL 334
>gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
Length = 407
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 103/328 (31%), Positives = 174/328 (53%), Gaps = 11/328 (3%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + ++ + Q L + + ++ I +Y + + P +L+NP++P+DP+ R
Sbjct: 12 WQGILAESCSDIQQLRDFLQLSDADSTMLESIQENYPLLVNPYYLSLVNPNDPDDPVRRM 71
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP EEL+ D G++ + L G+ H+Y + L+ + C +YCR CFRR +VG
Sbjct: 72 CIPAAEELDFSG--LADTSGESKSTVLPGLQHKYAETALVLSTNQCAMYCRHCFRRRLVG 129
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ ++ +A YI++ +I V+ +GGD L+ S++ L + L+ L I H++ +R
Sbjct: 130 RDADETV--RNIDAVADYIRDHEEITNVLISGGDALMNSNETLFRYLEALAPIPHLKTIR 187
Query: 180 FHSRVPIVDPQRINPE--LIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+R+P+V PQRI + LI L +++ NHP E + E+ AI L GI
Sbjct: 188 LGTRIPVVLPQRITDDPGLIDLLSGFNHIVQLHVVTQFNHPNEITPESRDAIRILLELGI 247
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIV 294
+ +Q+VLLKG+ND PE LA LM V + I PYY+ G F++ I G IV
Sbjct: 248 PVRNQTVLLKGVNDTPETLARLMDDLVGIGIVPYYVFQCRPTVGVKNRFQVPILTGCNIV 307
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
A + ++SGL + F + + GK+++
Sbjct: 308 AQARAQLSGLAKSFRYI-MSHDAGKIEL 334
>gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
Length = 365
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 108/329 (32%), Positives = 183/329 (55%), Gaps = 19/329 (5%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ + +K I Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
ISG+ + Y+ + GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317
>gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
SKA14]
Length = 313
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ L + + + +++ + + + DP+ RQ +P EE+
Sbjct: 1 MRDPHALLARLQLDAAALGVSEAAMAQFALRVPEGFVARMRRGDAADPLLRQVLPIDEEM 60
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
P D +GD G++ +Y R LL C + CR+CFRR +
Sbjct: 61 RPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DYGAENAA 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR HSR+PIV
Sbjct: 119 KGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDALRAIPHIRRLRIHSRLPIV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+VLL+G+
Sbjct: 179 LPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQAVLLRGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + L +L + + PYYLH D G +HF + + ++A L ++SG P
Sbjct: 239 NDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDARAKALIAGLTARLSGYLIP 298
Query: 308 FYILDLPGGYGKVKI 322
+ +LPG K +
Sbjct: 299 KLVRELPGDPSKRPV 313
>gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
Length = 365
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 107/372 (28%), Positives = 189/372 (50%), Gaps = 36/372 (9%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ + TS + + E+ +++K + + LIN +P+DPI + IP
Sbjct: 1 MKVRYYTSVTQVEQ---LSPEEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIP 57
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + +
Sbjct: 58 EEDELEE--WGSLDASSERSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVG 115
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HV I+R S
Sbjct: 116 AEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGS 173
Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++P +P RI +PEL++ +++ K +Y+ NH E +EEAI A++ L +AG +L
Sbjct: 174 KIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVL 233
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+ LL+GIND PE L L+ + + PYY+ +G F + IE+G +I
Sbjct: 234 CNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKA 293
Query: 298 KEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSY 335
+SG+ + Y+ + GK++I D N + + +
Sbjct: 294 ISNLSGVAKRVRYV--MSHRTGKIEIAALTKNFIVFKYHRAHDEENRRKVMVYRRNPNAL 351
Query: 336 CITDHHNIVHDY 347
D+ ++ +Y
Sbjct: 352 WFDDYTELIEEY 363
>gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta
thermophila PT]
gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT]
Length = 392
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 175/321 (54%), Gaps = 12/321 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ D+ + +K+++ ++ ++ +++ + +LI+ ++P DP+ + IP E+
Sbjct: 1 MRYVTDIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEM 60
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+DP + +++ L G+ H+Y L+ + + C CRFCFR+ +
Sbjct: 61 --YNWGTKDPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETA- 117
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D AL YI+E +I V+ +GGDPL+LS +RL+++++ LR I HVQI+R +++P+
Sbjct: 118 -IDLPRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVY 176
Query: 188 DPQRINPE--LIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+P RI + L++ +K +Y I NHP E S E + A+S+L AG I +SQ+
Sbjct: 177 NPFRITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTP 236
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
LL+G+ND+PE LA L + + + PYY+ + G HF++ +E IV K S
Sbjct: 237 LLRGVNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCS 296
Query: 303 GLCQP-FYILDLPGGYGKVKI 322
GL + ++ + GK+++
Sbjct: 297 GLAKRAKFV--MSHATGKIEV 315
>gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118]
gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118]
Length = 393
Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 10/328 (3%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHS-PL 86
+ + ++IA+TP +A L++ +PN PI Q++P EE D +G+ + P
Sbjct: 55 ETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEGDTVPG 114
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+VHRYP R+L + + C CRFC R+ MV G+V + + EA++ YI I +
Sbjct: 115 TSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGNQDIED 173
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
V+ +GGDP + +RL +L LR HV+ LR SR+ + P R+ PEL L++
Sbjct: 174 VLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVLEKHRV 233
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + IH NHP E + + + AGI++ Q+V LKG+NDD ++ L +E+
Sbjct: 234 QM-VNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQTIEMG 292
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
++PYY++ D+ G HF + ++ L+ ISG P +++D GG GK+ I
Sbjct: 293 VRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKLPITPS 352
Query: 326 NIKKV-----GNGSYCITDHHNIVHDYP 348
+++ + ++ + + P
Sbjct: 353 YVREEELPDGSGTTVKCRNYKGMTIEMP 380
>gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1]
gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter
sp. ADP1]
Length = 338
Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL + + L ++ ++ + S+ + + + N + +P DP+ Q +
Sbjct: 14 QLSDLIIDPFELLDQLDISSEQLLSGAILASDTFKLRVPRAFVNKMQKADPFDPLLLQVL 73
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EL PE DP+G+ + L G++H+Y R LL L C V+CR+CFRR +
Sbjct: 74 PHHLELEDHPEFVTDPLGEEEANQLPGVLHKYQSRFLLTLTGACAVHCRYCFRRHFPYQE 133
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + D YIQ+ I EVI +GGDPL L++ +L+ ++ L + V+ILR H
Sbjct: 134 N--LPKNNDWPQIQNYIQQHPLINEVILSGGDPLTLTNHKLKIWIERLESLPQVKILRIH 191
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SRVPIV P RI+ EL+ L+ + + + +H+NH E + + +L+ + + +Q+
Sbjct: 192 SRVPIVIPNRIDEELLSLLENSRLRIIMVVHSNHAAELDDFTCNQLHKLSLRNVTVFNQA 251
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLLKG+ND + L L + + R+ PYYLH D G HF L + + + +
Sbjct: 252 VLLKGVNDSAQTLIELSQRLFDARVMPYYLHVLDKVKGAQHFDLESSKVDSLYKEVLAGL 311
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G P + ++ G K +
Sbjct: 312 PGYLVPKLVREIAGEKNKTPL 332
>gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
melanesiensis BI429]
Length = 370
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 114/360 (31%), Positives = 188/360 (52%), Gaps = 31/360 (8%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
+ + + +++ E+K+++ Y +LIN +PNDPI + IPQ EEL
Sbjct: 9 IEKVDQLTEKEKQELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEELEE--WG 66
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ D + +++ KG+ H+Y D LL + VC +CRFCFR+ + + V +D
Sbjct: 67 KLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEVA--RDVTE 124
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
L YI++ +I V+ TGGDPL+LS K+L+K++ +R I+HVQI+R S++ +P RI
Sbjct: 125 DLEYIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRII 184
Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+PELI+ +K+ K +YI NHP E +E+AI A++ L AG IL +Q+ L+KG+N
Sbjct: 185 EDPELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVN 244
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DD + L L + + + PYY+ AG F + +EEG +I +SGL +
Sbjct: 245 DDWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRA 304
Query: 309 YILDLPGGYGKVKID-------------THN--------IKKVGNGSYCITDHHNIVHDY 347
+ GK+++ HN + K +Y D++ +V +Y
Sbjct: 305 RFA-MSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363
>gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 389
Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 15/340 (4%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + + +++ E+K I++ + + NLI+ ++P DPI + IP EL
Sbjct: 9 DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELKE--Y 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
R D + + + G H+Y LL + VC YCR+CFR+ + + + D
Sbjct: 67 GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLF--RNDVKEAMADVT 124
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ YI + +I ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R S++P+ +P RI
Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184
Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+PEL+ ++E + +Y+ H NHP E + EA L +AG I+++Q+ +LKGI
Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDD +L L+ + PYY AG + F + ++ ++V K + SGL +
Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304
Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L + GK++I + NG + H + +Y
Sbjct: 305 VR-LSMSHSSGKIEI-----LAIENGQAYLKYHQSRDGEY 338
>gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ]
Length = 447
Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 96/371 (25%), Positives = 188/371 (50%), Gaps = 25/371 (6%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
QL++ ++ + + I KE +D+IK + +TP I LI+ +P + P
Sbjct: 42 WQLKN-SIRKVEQVEKVLGSKISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCP 100
Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ +QF+P + L P + D +G++ SP+ + HRYPD++L +CPVYC +C R
Sbjct: 101 LRKQFLPMGSQFLEDHPYYQSDSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTR 160
Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
++G ++ + K + Y+ ++ +V+ +GGD +L+ K+++ + +
Sbjct: 161 SRIIGGSTESIEKETYGANQKKWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGEN 220
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
L I H++ +R ++ + PQ++ + + + + + GK V I H + E
Sbjct: 221 LLRIPHIRRIRLATKGVAIFPQKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEI 280
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
++ + A+ RL AGI++ +Q+VL +G+N+ + + L R L I+PYY++ D+ G
Sbjct: 281 TKWSQMAMDRLFQAGIVVRNQAVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPG 340
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
HFR T++E +++ +++ +G P ++ DLPGG GK + ++ NG
Sbjct: 341 CEHFRTTLKEAEELEKAVRGTTAGFNTPTFVCDLPGGGGKRHVASYEYYDEENGISVWKA 400
Query: 340 HH---NIVHDY 347
H + Y
Sbjct: 401 PHVKPGELFTY 411
>gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
Length = 335
Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 106/326 (32%), Positives = 174/326 (53%), Gaps = 6/326 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + Q+L + + ++ ++ + ++ + + + N I P + +DP+ +Q
Sbjct: 10 WQKSLAQAIRDPQELISRLNLPQDLLEPARRSAHLFPLMVPVSYLNRIEPGSLDDPLLKQ 69
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P + E +P D +GD N GI+ +Y R LL + C ++CR+CFRR
Sbjct: 70 ILPVELENADIPGFETDAVGDLNVRATPGILQKYHGRALLMVSGACAIHCRYCFRRHYPY 129
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L+ D E +Q S + E+I +GGDPL+L+ RL + + + I HV+ LR
Sbjct: 130 GDEPRTLA--DWEPVWQSLQADSTVQEIILSGGDPLLLTDLRLNDLCERIAAIPHVKRLR 187
Query: 180 FHSRVPIVDPQRINPELIQCL---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
HSR+P+V P RI+ L++ L E G ++ IH NHP E + + AI ++ AGI
Sbjct: 188 IHSRLPVVLPDRIHAGLLEMLHGLTEQGTMPWMVIHINHPNEIAPDVELAIKQMLQAGIP 247
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+L+QSVLLKGIND E L L V L + PYYLH D G +HF + +G+K++
Sbjct: 248 VLNQSVLLKGINDTAETLIELSEKLVNLGVIPYYLHQLDRVTGAAHFEVPQAQGRKLIEE 307
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
L+ ++ G P Y+ ++PG K +
Sbjct: 308 LRTRLPGYAVPQYVREIPGEPHKTSL 333
>gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
RKU-10]
Length = 365
Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 107/329 (32%), Positives = 182/329 (55%), Gaps = 19/329 (5%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
M++++ T +T + L E+ +K + Y +LI+ +P+DPI +
Sbjct: 1 MKVKYYTSITQVEQL------SPEERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKI 54
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ +
Sbjct: 55 IVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
ISG+ + Y+ + GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317
>gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
Length = 335
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 5/327 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +TS +L ++ + + + H+ + + + + +DP+ RQ
Sbjct: 11 WQTQLSEAITSIDELLEILQLQSLRSEVY--VPEHFELRVPRAFVAKMTVGDRDDPLLRQ 68
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P ++E + DP+ +N H+P+KG++H+Y R+LL L C ++CR+CFR+
Sbjct: 69 VLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYCFRQHFDY 128
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S S+K + + YI +I E+I +GGDPL ++++RL L TL I+ + +R
Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAIEQLTTIR 186
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P R++ L++ L ++ + + IH NH E + R AGI LL+
Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARAAGITLLN 246
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKGIND L + + PYYLH D AG +HF ++ SL
Sbjct: 247 QAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIELYWSLLA 306
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
K+ G P + +LP KV I+ +N
Sbjct: 307 KLPGYLVPKLVRELPNKPFKVPINVYN 333
>gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
HTCC5015]
Length = 343
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 4/318 (1%)
Query: 7 TLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+TS +L + ++ + +S+ + + + +DP+ Q +PQ
Sbjct: 28 AVTSPAELLRLVGLDQHPRWKEQAERAQPPFSLKVPRSYIHRMQFGCADDPLLLQALPQA 87
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + DP+GD N G++H+Y R+LL C ++CR+CFRRE Q
Sbjct: 88 VEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYCFRREYPYEQASA 147
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
S + +L YI S I EVI +GGDPL LS KRL K++ + I HVQ LR HSR+
Sbjct: 148 TQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETISHVQRLRIHSRL 205
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
PIV P R+ L Q L ++ + +HANH E A+ L AG+ L+Q+VLL
Sbjct: 206 PIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRRAGVDCLNQAVLL 265
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
GIND E LA L E PYYLH D G +HF + + +VA L+E++SG
Sbjct: 266 AGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKHLVAQLRERLSGY 325
Query: 305 CQPFYILDLPGGYGKVKI 322
P + ++ G K +
Sbjct: 326 LVPTLVREIEGESSKTPL 343
>gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
Length = 351
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 161/318 (50%), Gaps = 3/318 (0%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++H + L + + K + + + I N NDP+ RQ +P
Sbjct: 27 IKH-AIKDLDTLAKKLNLNLTSVLTGKHAHKAFQLMVPMPYLERIEKGNLNDPLLRQILP 85
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EE+ + DP+ + +H+P K +VH+Y RIL+ C + CR+CFRR +
Sbjct: 86 IDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCRYCFRRHFPYANN 145
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
L+ + ++ L+YIQ QI EVI +GGDPL++ K+L +++ L + ++ LR H+
Sbjct: 146 --HLAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLEALPQLKRLRIHT 203
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+PIV P RIN EL+ + V + +H NH E + I A S+LA G+ LL+Q V
Sbjct: 204 RLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKLAKIGVRLLNQGV 263
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
+LK +ND E L + I PYY+ D G SHF +TI++ Q+++ + +
Sbjct: 264 ILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQAQQLMGQVAANLP 323
Query: 303 GLCQPFYILDLPGGYGKV 320
G P ++PG K
Sbjct: 324 GYLVPKLAKEIPGKTAKT 341
>gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
Length = 338
Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 4/324 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q + +T +L N I EQ+ S + + + + NP DP+
Sbjct: 11 WQAQLSDLITDPLELLNILEISPEQLLSGALLASTQFKLRVPRAFVTRMQKGNPLDPLLL 70
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL P+ DP+G+ + G++H+Y R LL L C V+CR+CFRR
Sbjct: 71 QVLPHHLELEEHPDFVTDPLGEEQANQQPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + S+D YIQ + I EVI +GGDPL LS+++++ ++ L I ++ L
Sbjct: 131 YQEN--LPKSEDWINIQHYIQSQPDINEVILSGGDPLTLSNRKIKLWIERLESIPQLKFL 188
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSRVPIV P R++ ELI LK + + + +H+NH E + + + I +
Sbjct: 189 RIHSRVPIVMPNRVDDELISILKNSRLRIILVVHSNHASELDDFTCRQLQQFVAEKITVF 248
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+ND +IL +L + + PYYLH D G HF L ++ + L
Sbjct: 249 NQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYLHVLDKVKGAHHFDLNPQDIDFLYQGLL 308
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ G P + ++ G K +
Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332
>gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
Length = 378
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 103/345 (29%), Positives = 182/345 (52%), Gaps = 16/345 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
+ ++ +T+A+ L ++E +++++ IS + ++ P +LI+P +P+DPI + +P
Sbjct: 1 MLNENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+EL+ P R D G+ +++ L G+ H+Y L+ + C +YCR CFR+ +VG +
Sbjct: 61 ALDELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEG 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+D LAYI++ +I V+ +GGD L+ L + L+ L ++H+ ++R S
Sbjct: 119 RETRPRRD--KVLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICS 176
Query: 183 RVPIVDPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R P+V P RI + L+ KE G K + + NHP E S +A A+ L G+++
Sbjct: 177 RTPVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVR 236
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASL 297
+Q+VLL G+ND L L++ V + PYY+ G +F++ I + IV
Sbjct: 237 NQTVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEA 296
Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
K+ +GL + Y+ L GK++I + VGNG + H
Sbjct: 297 KQMQNGLGKAFRYV--LSHETGKIEI----LGPVGNGRWLFKYHQ 335
>gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
19.5.1]
Length = 366
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 13/322 (4%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K LT + + K + +++K+++ + NLI +PNDPI R IP +
Sbjct: 5 KYLTRIDQISQ---LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMD 61
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL D ++ ++ G+ H+Y D L+ + VC CRFCFR+ + + +
Sbjct: 62 ELIE--WGELDASNEHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREI 119
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ D E L YI++ +I V+ +GGDPL+LS +L+ ++ LR I HVQI+R +++
Sbjct: 120 M--IDVEPGLEYIKKHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMV 177
Query: 186 IVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+P RI +P+LI+ LK+ K +YI NHP E ++ AI AI+ L AG L +Q
Sbjct: 178 AFNPYRIIDDPKLIELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQ 237
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ L++GIND PE LA L R + + PYY+ G + + IEEG +I
Sbjct: 238 TPLIRGINDSPETLAELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAM 297
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
+SGL + + GK+++
Sbjct: 298 VSGLAKRARFA-MSHMTGKIEV 318
>gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
Length = 498
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 115/343 (33%), Positives = 174/343 (50%), Gaps = 26/343 (7%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88
+ ++ +TP I + IN HNP +DPIARQF+P K + P+ D + + SP+KG
Sbjct: 143 TAATMAVRMTPYILSRINWHNPRHDPIARQFLPLKSRMIPDHPKLTLDSLHEEADSPVKG 202
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
+VHRYPD+ L VCP YC FC R VG+ TV + + ALAYI +
Sbjct: 203 LVHRYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQP 262
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NP 194
Q+ +++ +GGD L ++L+++ + L I H++ RF S+ V P R+
Sbjct: 263 QLQDIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTD 322
Query: 195 ELIQ---CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ + AGK V H NHP E S AA RL G+++ +QSVLL+G+NDD
Sbjct: 323 ALVRVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDV 382
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
E + L+R I PYY++ D+ H R + + A L+ I+G P +++
Sbjct: 383 ETMGALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVV 442
Query: 312 DLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
DLPGG GK ++ + G Y D N V++Y
Sbjct: 443 DLPGGGGKRLACSYESYDRATGISRYTAPAVTGRDKENKVYEY 485
>gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 329
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 3/317 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T + L + + + + + + + + I +PNDP+ Q +P+ +E
Sbjct: 13 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPIPFIKKIRKGDPNDPLLLQVMPRHQEF 72
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+DP+ + ++ G++H+Y R+L+ C V CR+CFRR + L+
Sbjct: 73 LTKSGFNKDPLLEQDNDQ-PGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 129
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
K L+YI+ S I EVI +GGDPL+ + L L + ++ +R HSR+P+V
Sbjct: 130 KKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWFLDELEQLPQIKRMRIHSRLPVV 189
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P R+ EL + L ++ + H NH E + AA+ +L A + LL+Q+V+LK +
Sbjct: 190 IPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKAAMQKLKQANVTLLNQAVILKDV 249
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P
Sbjct: 250 NDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDINEEDAIKIMAELLKALPGFLVP 309
Query: 308 FYILDLPGGYGKVKIDT 324
+ ++ G K ID
Sbjct: 310 KLVREIGGQKSKTPIDL 326
>gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297]
gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297]
Length = 346
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 168/325 (51%), Gaps = 3/325 (0%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q K + +L + +K ++ + ++ + + +T +A+L+ NP DP+ Q
Sbjct: 24 WQKSIAKGFRTPSELLDYLNLKTSELPYQIDPNSPFRMRITRHLASLMEKGNPFDPLLLQ 83
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
IP+ +E P + DP+ + ++ + G++H+Y +R+L+ C ++CR+CFRR
Sbjct: 84 LIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQNRVLIIAHQACAIHCRYCFRRHFPY 143
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
S+ LS +A YIQ S I EVIF+GGDPL L+ + L +++ + +Q +R
Sbjct: 144 SE--ARLSESSLDAIEQYIQSHSDIDEVIFSGGDPLSLADEALSNLIQRFDRLPQIQTVR 201
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R P+ P+RI L+ L V + +H NHP E + +A RL + + LL+
Sbjct: 202 LHTRTPVAAPERITETLLNTLNNLSCQVVMVVHINHPNELHPDLLAKFLRLRDINVTLLN 261
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL+GIND + L + + PYYLH D GTSHF + + +I ++
Sbjct: 262 QSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSLDPVQGTSHFDVNQQTAGQIWLEMQA 321
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
+SG P + ++P + K I
Sbjct: 322 GLSGYLLPRLVREIPQRHSKTWIHP 346
>gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 342
Score = 358 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR
Sbjct: 142 AEE--TATRDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFVAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 372
Score = 358 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 102/323 (31%), Positives = 170/323 (52%), Gaps = 13/323 (4%)
Query: 8 LTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
S +++ A I + ++++E+ + + + A LI+ +PNDPI P +
Sbjct: 6 FKSLEEVEQAFGVKIPDSEREKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL++ D G+ ++ L G+ H+Y + LL + + C YCR CFR+ +VG
Sbjct: 66 ELDVSGSY--DTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
L K + A+ YI+E +I V+ +GGDPL+L ++ L L I H++ +RF SRVP
Sbjct: 124 L--KLFDRAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181
Query: 186 IVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ P RI + L++ + P VY+ H NHP E ++EA A+ L AG+ + +Q
Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKE 299
+VLLKG+ND PE+LA LM+ + PYY+ +HF++ ++EG IV K
Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G + + + GK++I
Sbjct: 302 MLDGHAK-RFKYIMSHKTGKIEI 323
>gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12]
gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 357
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 39 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 99 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSIAHLKRLRIH 216
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 336
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357
>gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
DSM 15981]
Length = 364
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 18/341 (5%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T A++L + E+ ++ I H+ + +T +LIN +P DPI R IP EE
Sbjct: 11 ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ + D G+ +++ L G+ H+Y + +L+ H C +YCR CFR+ +VG
Sbjct: 71 DMTGKF--DTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDDETA- 127
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ YI++ ++I + +GGD + S+ +++ L+ I+H+ ++RF +R P+V
Sbjct: 128 -DNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPVV 186
Query: 188 DPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
P RI +PEL++ L+ K +Y+ NHP E + EA A+ L NAG++L +Q+VL
Sbjct: 187 LPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK--EK 300
LKG+NDD + L++ I PYY+ +G HF++ + EG +IV K +
Sbjct: 247 LKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQN 306
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
G C Y+ + GK++I + ++ +G H
Sbjct: 307 GPGKCV-RYV--MSHVTGKIEI----LGQLPDGQMLFKYHQ 340
>gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 342
Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+ I I EV+ +GGDPL L+ +L ++ L + H++ LR
Sbjct: 142 AEE--TAARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus
selenitireducens MLS10]
Length = 386
Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 106/352 (30%), Positives = 178/352 (50%), Gaps = 23/352 (6%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
+ + E+ ++K+I+ + + LI+ +P DPI + IP + EL
Sbjct: 10 IEKVPHLSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGELEE--YG 67
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
R D ++ + + G H+Y + LL + VC YCR+CFR+ + + +S D +
Sbjct: 68 RWDASDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQP 125
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
+ YI+E +I V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI
Sbjct: 126 GIDYIKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185
Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ EL+ + E + +Y+ H NHP E + EA L NAG I+++Q+ +L+GIN
Sbjct: 186 EDQELLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGIN 245
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DDP +L L+ + PYY AG + F L+++E IV K + SGL +
Sbjct: 246 DDPVVLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGLGKRV 305
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI--------VHDYPPKSS 352
L + GK++I + +G + H + V D P +S
Sbjct: 306 R-LSMSHTSGKIEI-----LAIDDGKAYLKYHQSRDGHYGKFMVLDCPEDAS 351
>gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
radioresistens SK82]
gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
Length = 338
Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q + +T +L +A + EQ+ S + + + + +P DP+
Sbjct: 11 WQSQLSDLITDPLELLHALQLSPEQLLSGAVLASEKFKLRVPRAFVAKMCIGDPLDPLLL 70
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL P DP+G+ + L G++H+Y R LL L C V+CR+CFRR
Sbjct: 71 QVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + ++D A YI + ++ E+I +GGDPL LS+++L L+ L I + L
Sbjct: 131 YQEN--LPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLESIPQIDTL 188
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSRVPIV P RI+ ELI L+ + + + +H+NH E + + + LA + +L
Sbjct: 189 RIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHELARRQVTVL 248
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKGIND E+L NL E R+ PYYLH D G HF L + ++ +
Sbjct: 249 NQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKIDEVYKEVL 308
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ G P + ++ G K +
Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332
>gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
Length = 397
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 104/343 (30%), Positives = 186/343 (54%), Gaps = 12/343 (3%)
Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + ++L I + D + + +TP IA L++ + PI Q++P++
Sbjct: 51 SFKTDKELSKVFGNINPVEED----VYKVIATRITPYIAQLMDKDDQACPIRIQYVPEQN 106
Query: 66 ELNILPEEREDPIGDNNHSP-LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+++ P+E D + +++ P IVHRYP+R+L + ++C YCR C R+ MV S
Sbjct: 107 EMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLN 165
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSR 183
V+S + ++ Y++E ++ +V+ +GGDPL+L+ +L +VL +R ++ILR SR
Sbjct: 166 VISMERIRKSVEYLREHPEVQDVLLSGGDPLLLTDDKLDQVLSMIREARPDLKILRIGSR 225
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P P RI PEL Q L + + + NHP E + + ++ L +GI+L +QSVL
Sbjct: 226 LPTQLPTRITPELCQILVKNRVTL-LNTQVNHPKEITPLFVKHMAMLRTSGIMLGNQSVL 284
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+KG+ND E++ +L+ V I+PYY++ D A G S F+++ + +I ++ +SG
Sbjct: 285 IKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDPAPGNSKFQVSYDRMLEIYHGIRGWVSG 344
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKV---GNGSYCITDHHNI 343
P +I+D GG GK+ + ++K G T+
Sbjct: 345 PAIPTFIVDGIGGLGKMPVQPEYVRKQVIDGETKLLATNFEGR 387
>gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125]
gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis
TAC125]
Length = 308
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ + + + + + + NDP+ Q +P+ +E +DP+ + ++ G+
Sbjct: 14 KARSLFPVRVPIPFIKKMRKGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQ-PGL 72
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y R+L+ C V CR+CFRR + L+ + AL+YI+ + I EVI
Sbjct: 73 LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVIL 130
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ + L L + ++ +R H+R+P+V P RI EL + L + +
Sbjct: 131 SGGDPLMAKDDAISWFLDELEQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVF 190
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E ++ AA+ +L G++L +Q+V+LK +ND NL + + PY
Sbjct: 191 VNHINHANEIDDDFKAAMQKLKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPY 250
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
YLH D G SHF ++ E+ KI+A L E + G P + ++ G K ID
Sbjct: 251 YLHLLDKVEGASHFDISEEQAIKIMAELLEALPGFLVPKLVREIGGEKSKTPIDL 305
>gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 342
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLELLGLNAQAAAISDTAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--SAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L+ L+ PV +HANH EF A+ L + G LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRDTGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL G+ND + LA L + PYYLH D AG +HF + + + L
Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
Length = 340
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 96/329 (29%), Positives = 159/329 (48%), Gaps = 7/329 (2%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
QL K+ + L + +E E +S + L+ NP DP+ RQ
Sbjct: 12 WQLELAKSYKDPRQLLTTLGLDPNAFNEHLEAKKLFSFRVPRPFVELMEAGNPQDPLLRQ 71
Query: 60 FIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+P +E + P DP+ + H+ +G++H+Y R+LL + C + CR+CFRR
Sbjct: 72 VLPLADEFTVTPGYSTDPLNEVTDKREHAVPQGLLHKYASRVLLLVQGACAINCRYCFRR 131
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+ VL K + + Y+++ ++ EVI +GGDPL + L ++ L +K +
Sbjct: 132 HYPYADD--VLPRKQFDECVEYVRQNQEVNEVILSGGDPLFANDGYLIELADKLAELKQI 189
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+ LR HSR+P+V PQR+ L L + + V + IHANH E ++ G+
Sbjct: 190 KRLRIHSRLPVVLPQRLTERLATHLTQRFEQVILVIHANHANEIGSSLKQHLATWRQRGV 249
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
LL+QSVLLK INDD + L+ L + + PYYLH D G +HF ++ +++
Sbjct: 250 TLLNQSVLLKAINDDADSLSQLSERLFDASVLPYYLHQLDPVQGAAHFAISDARARELWQ 309
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT 324
+ ++ G P + ++P K I
Sbjct: 310 QINARLPGFLVPKLVREIPNRDSKTPIMP 338
>gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632
gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
Length = 374
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 34/346 (9%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+++ ++ +LIN NPNDPI R IP EEL + + D ++ + + G+
Sbjct: 27 KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEV--WGKLDASNESKYMKVHGL 84
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
H+YPD LL + VC +YCRFCFR+ + + V +D L YI+ +I V+
Sbjct: 85 EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEVA--RDVSEGLEYIRNHPEINNVLL 142
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-----ELIQCL-KEA 203
TGGDPLIL+ +L+K+LK L I HV+I+R S++ V+P R+ EL + E
Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGINDD E L L+
Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322
+ + PYY+ AG + IEE +V +++ ++SGL Y+ + GK++I
Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLAARVRYV--MSHETGKIEI 320
Query: 323 ----------------DTHN-----IKKVGNGSYCITDHHNIVHDY 347
D N + K ++ D+ +V +Y
Sbjct: 321 LGKTDEHIFFRYHRAADPENRGKFMVFKRNPEAHWFDDYTELVAEY 366
>gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
Length = 342
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAASISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 342
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str.
306]
gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 342
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ P D +GD G++ +Y R LL C +CR+CFRR
Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR
Sbjct: 142 AEE--TAARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L L+ PV +HANH EF AA L G LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRETGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
K90mix]
Length = 348
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 3/322 (0%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + L + + + + + + + +P DP+ Q
Sbjct: 24 WQQALARAIRDPVTLARELELDPAHLPGLHAGHTLFRVRVPRSYLARMRKADPQDPLLLQ 83
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ++E P DP+GD++ G+VH+Y R+LL C V+CR+CFRRE
Sbjct: 84 VLPQQQESEEHPGFVADPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPY 143
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ S D A+AYI + I EVI +GGDPL LS +RL +++ L I H++ LR
Sbjct: 144 AEH--NASQDDWAPAIAYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLR 201
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+R++ +L+ L + + +HANHP EF++ A A++RL GI LL+
Sbjct: 202 IHTRLPVVLPERVDEQLLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLN 261
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL GINDDP+ L L + PYYLH D GT+HF +T ++ +L
Sbjct: 262 QAVLLAGINDDPDTLCELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHA 321
Query: 300 KISGLCQPFYILDLPGGYGKVK 321
++ G P + ++PG GK
Sbjct: 322 RLPGYLVPRLVREIPGEPGKTP 343
>gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 338
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ +LI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L + I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
DSM 180]
Length = 335
Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
R T +L + + +I ++ + + + + +P+DP+ RQ +P
Sbjct: 18 RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E + DP+GD G++ +Y R LL + C ++CR+CFRR +
Sbjct: 78 TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPY--QD 135
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
S E AL I + EV+ +GGDPL+L RL +++ L I H+Q LR HSR
Sbjct: 136 LGPSQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
VP+V P R+ L L + IHANHP E E +A+ AG+ LL+QSVL
Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+ND EILA L + PYYLH D AG++HF + E ++++ ++ ++ G
Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315
Query: 304 LCQPFYILDLPGGYGKVKI 322
P + ++PG + K +
Sbjct: 316 YLVPRLVREIPGDHSKRPL 334
>gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
Length = 338
Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + + D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + L++ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLMPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE]
gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056]
gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058]
gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059]
gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978]
gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
AB307-0294]
gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2]
gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715]
gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
Length = 338
Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF]
gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 338
Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 103/292 (35%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E RI PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
TCF52B]
Length = 370
Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 34/371 (9%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ +T + + + +E+ +++K+++ Y LIN +PNDPI IP
Sbjct: 1 MQVNYITKIEKVPQ---LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIP 57
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
Q EL R D + +++ KG+ H+Y D LL + VC +CRFCFR+ + +
Sbjct: 58 QIGELEE--WGRLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVG 115
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+ +D L YI++ +I V+ TGGDPL+L+ K+L+K++ +R I HVQI+R S
Sbjct: 116 EEVV--RDVSEDLEYIKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGS 173
Query: 183 RVPIVDPQRIN--PELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++ +P RI PELI+ +K+ K +YI NHP E ++EAI A++ L AG IL
Sbjct: 174 KMVAFNPYRITEDPELIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAIL 233
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+Q+ L+KG+N D + L L + + + PYY+ AG F + +EE +I
Sbjct: 234 ANQTPLIKGVNADWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKA 293
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSYC 336
+SGL + + GK+++ D N + K +Y
Sbjct: 294 IMNVSGLAKRARFA-MSHETGKIEVSALTKEHVIFRYQRAHDPKNAGKIMVYKRNPNAYW 352
Query: 337 ITDHHNIVHDY 347
D+ +V +Y
Sbjct: 353 FDDYTELVEEY 363
>gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
Length = 338
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ + Q L + E + ++ + + + + NDP+ RQ +P +E
Sbjct: 23 AIKNPQQLLELLDLNPEMFALSEPARKNFPMLVPLPFIKKMKKGDINDPLLRQVLPITDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ DP+ ++++S ++G++H+Y RILL L C V CR+CFRR + L
Sbjct: 83 DKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYCFRRHFPY--QDNNL 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ K + Y++ + EVI +GGDPL+ L V+ L+ +K ++ LR H+R+P+
Sbjct: 140 NKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQLKQLKRLRIHTRLPV 199
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V PQR+ L + LK V +H NH +E + A+ +L +AGI LL+QSVLL+G
Sbjct: 200 VIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHHAGIQLLNQSVLLRG 259
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+ND+ E L L + I PYYL D G HF L ++ + ++ + + G
Sbjct: 260 VNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKALLLEISAALPGYLV 319
Query: 307 PFYILDLPGGYGKVKIDT 324
P ++ G K I
Sbjct: 320 PRLSREIAGEKSKTLITP 337
>gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
Length = 338
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900]
Length = 338
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
Length = 370
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 31/364 (8%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
L I +E++ E++ + Y +LIN + NDPI + IP EEL
Sbjct: 6 VTKLEKVKGISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEELEE- 64
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
ED +++++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +++
Sbjct: 65 -WGLEDASREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTRE 123
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ L YI++ +I V+ TGGDPL+LS +L+ +++++ I H++I+R ++ P +P
Sbjct: 124 IDKDLDYIRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPF 183
Query: 191 RI--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
RI + L +K+ +GK +Y +H NHP E + +I I+ L N+G I+ +Q+ LL
Sbjct: 184 RIISDDALSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLH 243
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+P+ L+ L + I PYY+ G F + +E+ I E ISGL
Sbjct: 244 GINDNPKTLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLA 303
Query: 306 -QPFYILDLPGGYGKVKIDT---------------------HNIKKVGNGSYCITDHHNI 343
+P ++ + GK+++ + K +Y D+ +
Sbjct: 304 KRPRFV--MSHESGKIEVAALTSKNIIFRYHRSHNLDNYGKFFVFKRNPQAYWFDDYKEL 361
Query: 344 VHDY 347
V Y
Sbjct: 362 VEIY 365
>gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c]
gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 357
Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 39 QVWREAIRDPRELLALLRLDPTSVGISEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 99 PMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSIPHLKRLRIH 216
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARALHAELVARL 336
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357
>gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
marisnigri JR1]
gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
Length = 386
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 29/359 (8%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
L + I E+ + E+++ ++ +LI+ +P DPI R +P EEL
Sbjct: 20 VSSLDSVPGIDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE-- 77
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P DP ++ ++ G+ H+Y + LL + +C CR+CFR+ + + V +KD
Sbjct: 78 PWGHLDPSSEHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKD 135
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
A LAYI++ +I V+ TGGDPL L R+ +++ +R I+HV I+R +++P +P
Sbjct: 136 ISAGLAYIRDHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPF 195
Query: 191 RI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
RI +P L+ +++ K +YI NHP E ++ A A++ L AG ++++Q+ L++
Sbjct: 196 RIINDPALLDMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIR 255
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GINDDPE+LA L + PYY+ A G F + +EE +I + SGL
Sbjct: 256 GINDDPEVLAALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLA 315
Query: 306 QP-FYILDLPGGY----GKV---------------KIDTHNIKKVGNGSYCITDHHNIV 344
+ +++ G GK + + K +Y D+ +V
Sbjct: 316 KRARFVISHATGKIEVLGKTDRYTYFKYNQATNPEDLGRFMVYKSNPEAYWFDDYTELV 374
>gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli]
gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli]
Length = 328
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +L + + + + + S + + + + + NP DP+ +Q
Sbjct: 5 WQTFLKEAVADPAELLDRLALNPQLLSAAQHASRLFPLRVPSGFIDRMQKGNPADPLLQQ 64
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E I + +DP+ +N +PL G++H+Y RILL + C + CR+CFRR
Sbjct: 65 VLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + K A +AYIQ + I EVI +GGDPL+ L+ + L I HV+I+R
Sbjct: 125 GKN--KVGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDLAAIPHVKIVR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R+ L+ L + H NH E ++ AI + I +L+
Sbjct: 183 IHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEKCRQRKIHVLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLLKG+ND E L +L E I PYYLH D G +HF + E+ + ++ +L+E
Sbjct: 243 QAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEKMKPLLKALRE 302
Query: 300 KISGLCQPFYILDLPGGYGKVK 321
++ G P + + G K+
Sbjct: 303 RLPGYLVPKCVYEQAGALSKMP 324
>gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 342
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 153/323 (47%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+PIV P+R++ L+ L+ P +HANH EF A+ L + G LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL G+ND + LA L + PYYLH D AG +HF + + + L
Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
FTG]
Length = 328
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + + GII L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDNVSKVLKEIHKHGIITLNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549]
Length = 328
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR51-B]
Length = 356
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 12/335 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQID---------EIKEISNHYSIALTPVIANLINPHNP 52
QLR+ + S L ++ + ++ + + + + + + + P +P
Sbjct: 23 QLRN-AVRSVSALLDSLNLTPADVEHGEPKTRGEDAERAAQDFPVRAPQSFIDRMRPGDP 81
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDP+ RQ + E +P EDP+ + + +P GIVH+Y R+LL C V+CR+C
Sbjct: 82 NDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACAVHCRYC 141
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
FRR + L + A+ Y+ + ++ EVI +GGDPLIL L +++ L +
Sbjct: 142 FRRHFPYA--DNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLIDRLESL 199
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
H+ LR HSR+P+V P R+ L + L + + +H NHP E + R
Sbjct: 200 GHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTERLQRWRP 259
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
A + LL+QSVLL G+NDDP +L L E + PYYLH D AG HF + E+
Sbjct: 260 ASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVADEQALA 319
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
I + K+ G P +LP K +
Sbjct: 320 IYRQMAAKLPGYLLPKLARELPDLPSKTTYGLDTL 354
>gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1]
gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 342
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 84 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A A+++ I EVI +GGDPL LS +L ++ LR H++ LR H
Sbjct: 144 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342
>gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
DSM 9799]
Length = 400
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 178/320 (55%), Gaps = 7/320 (2%)
Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-K 87
++ + +TP +A L++ ++PN PI Q++P+++E++I P E D + +++ P
Sbjct: 75 DDVYKVIAARITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGT 134
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+VHRYP+R+L + ++C YCR C R+ MV S V+ ++ Y+++ ++ +V
Sbjct: 135 SLVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDV 193
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ +GGDPL+L+ +L ++L +R ++ILR SR+ P R+ PEL+ L +
Sbjct: 194 LLSGGDPLLLTDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVKNRVT 253
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ I NHP E + I + L AG++L +QSV++KG+NDD E++ +L+ V I
Sbjct: 254 L-INTQVNHPREITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGI 312
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
+PYY++ D A G S F ++ + +I ++ +SG P +I+D GG GK+ +
Sbjct: 313 RPYYVYSMDPAPGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEY 372
Query: 327 IKKV---GNGSYCITDHHNI 343
+KK G T+
Sbjct: 373 VKKTVQDGETKLIATNFEGR 392
>gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
salexigens DSM 2638]
Length = 353
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 20/355 (5%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+++ + + + L + ++ + I ++ TP +A+L++ +PN PI Q I
Sbjct: 7 QMKN-MVDNLERLKQYINVTPDEEEAINTLNTK--WGTTPHMASLMDKDDPNCPIRMQAI 63
Query: 62 PQKEELNILPEEREDPI------GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
P +E E D D I +Y DRI + +C YCR CFR+
Sbjct: 64 PSLKETKN--EFGLDNYLVWKENRDTEEKRPDCIARQYVDRIAFTVTDICANYCRHCFRK 121
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
E+V + + D E + +I+E +I +V+ TGGDPL+LS R+ +LK+LR I HV
Sbjct: 122 ELVVDKNLEL--RFDLEEGIDWIREHEEIRDVLVTGGDPLLLSDDRIDHLLKSLRSIDHV 179
Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+++RF SRVPI PQRI PEL++ L + PV++ NHP E + A+ L AG
Sbjct: 180 EMIRFGSRVPIAMPQRITPELLEVLGGDHEVPVWLNTQCNHPKELTPRTRKAVYDLLTAG 239
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+ + +Q VLLKGINDD E +L + ++ RI+PYY+ + + A G HFR + I
Sbjct: 240 VNVGNQMVLLKGINDDVETFRHLHQKLLQYRIRPYYVFYCEPAPGIDHFRT---RAELIR 296
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYP 348
L+ +GL QP Y+ GK+ + + Y +H P
Sbjct: 297 DGLRGHTTGLAQPMYVC--ATNIGKIPLMPDYYCVDKNDKEYTFRNHRWQTTTMP 349
>gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp.
tularensis FSC198]
gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis WY96-3418]
gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
tularensis subsp. tularensis NE061598]
Length = 328
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
Length = 338
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q + +T +L N + EQ+ S + + + ++ +P DP+
Sbjct: 11 WQSQLSDLITDPLELLNLLELSTEQLLSGAIFASEQFKLRVPRAFVGKMSIGDPFDPLLL 70
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR+CFRR
Sbjct: 71 QVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCRYCFRRHFP 130
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + + D YI++ QI EVI +GGDPL LS+++L L+ L + ++IL
Sbjct: 131 YQEN--LPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLASLPQIKIL 188
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSRVP+V P RI+ ELI LK + + + IH+NH E + + + +L+ I +L
Sbjct: 189 RIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQLSEHHITVL 248
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLLKG+ND EIL NL + R+ PYYLH D G HF L E I +
Sbjct: 249 NQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYTDVL 308
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ G P + ++ G K +
Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332
>gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus
cellulosilyticus DSM 2522]
Length = 388
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 15/339 (4%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
+ I +E+ ++K+I+ + + NLI+ +NPNDPI + IP + EL
Sbjct: 10 IDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEGELEE--YG 67
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
R D ++ + G H+Y LL + VC YCR+CFR+ + + + D +
Sbjct: 68 RWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLF--RNDIKEAMADVQP 125
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
+ YI+ QI V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI
Sbjct: 126 GIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185
Query: 193 -NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ EL+ +KE P +Y+ H NHP E +EEA L NAG I+++Q+ +LKGIN
Sbjct: 186 EDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVVNQTPVLKGIN 245
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
DDPE+LA L+ + PYY AG + F LT+EE V + K K SGL +
Sbjct: 246 DDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAKAKTSGLGKRV 305
Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L + GK+++ + NG + H + DY
Sbjct: 306 R-LSMSHTSGKIEV-----LAIDNGKAYLKYHQSRDGDY 338
>gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
Length = 342
Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + ++L + E + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRELLALLGLDAAAAGISAEAAAQFPLRVPRAFVARMRRGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAIGHIKRLR 199
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P+R++ L+ L+ PV IHANH EF AA+ + + G LL+
Sbjct: 200 IHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRDTGAQLLN 259
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + L
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARALHTELAT 319
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++PG GK +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342
>gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
Length = 338
Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + + D YI+ I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPHINEIILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 328
Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + +H NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVVHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
Length = 308
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 3/295 (1%)
Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
+ + + + + I + NDP+ Q +P+ +E +DP+ + +++ G+
Sbjct: 14 KARSLFPVRVPLPFIKKIRHGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQ-PGL 72
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+H+Y R+L+ C V CR+CFRR + L+ + AL+YIQ I EVI
Sbjct: 73 LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVIL 130
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDPL+ + L L I ++ +R HSR+P+V P RI +L + L ++ V
Sbjct: 131 SGGDPLMAKDDAISWFLDELEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIF 190
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NH E + A++ L A ++LL+Q+V+LK +ND + NL + + PY
Sbjct: 191 VNHINHANEIDSDFKNAMNMLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPY 250
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
YLH D G SHF + + KI+A L E + G P + ++ G K ID
Sbjct: 251 YLHLLDKVEGASHFDIDEAQAIKIMAELLEALPGFLVPKLVREIGGQKSKTPIDL 305
>gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
Length = 326
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 5/314 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
+ ++L + + + Y A++ ++ ++ P+DPIA QFIP EL I
Sbjct: 2 TPEELARRANLTPATLHRL---LAEYQYAMSDEMSAAMH-DAPDDPIAAQFIPDARELTI 57
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
E DPIGD HSPL +VHRYP+R+L K+ +C VYCRFCFR+E +G +G L
Sbjct: 58 AASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRFCFRKEHIGR-RGQALRQS 116
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ A AY+ QI E+I +GGDPL LS+K+L++ L +R + H++ LR HSR+P+V P
Sbjct: 117 EIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRDLPHIRRLRIHSRIPVVQP 176
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
RI+ L+ L E + ++ +H NH E + A AA+ RL +G++L SQ+VLLKG+N
Sbjct: 177 ARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLRTSGVMLYSQTVLLKGVNA 236
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D LANLM ++ +KPYYLHH DLA GT H+R+++ EG+ IVA+L+ ++SG+ P Y
Sbjct: 237 DAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGRAIVAALRRRLSGIAMPTY 296
Query: 310 ILDLPGGYGKVKID 323
I+++PGG GK+ +
Sbjct: 297 IVEIPGGDGKIPVG 310
>gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
Length = 327
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 6/322 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q++ + T+ + L + + + EI + + + + L +A I N NDPI RQF+
Sbjct: 12 QIQRQNFTNWEKLADFLELDEFHRQEIMK-NPRFVLNLPIRLAKKIEKGNLNDPILRQFL 70
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E+ DP+GD+ ++H+Y R+LL C ++CR+CFR+
Sbjct: 71 PMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNFDYEV 130
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ + L I + I EVI +GGDPL LS++ L +L+ + I H+ LRFH
Sbjct: 131 EDKTF-----DEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRFH 185
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR PI P+RI+ E ++ + V+ IH NHP E ++ ++ L G+ +L+Q+
Sbjct: 186 SRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQA 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+NDD + LA L T + I PYYLH D G SHF ++ EEG +++ L ++
Sbjct: 246 VLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRRL 305
Query: 302 SGLCQPFYILDLPGGYGKVKID 323
G P Y+ ++ G K ++
Sbjct: 306 PGYAVPKYVQEIAGEPSKTPLN 327
>gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2]
gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2]
Length = 359
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 13/348 (3%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + + L E++ I + TP A L++P +P P+ RQ IP +EL
Sbjct: 12 INTPEKLRRIINPTPEELKAINTLDT--RWGTTPYFAALMDPDDPCCPVRRQIIPSLKEL 69
Query: 68 NILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ + N + I +Y DR+ + C YCR CFRRE+V Q+
Sbjct: 70 ENTYGIKNYLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRL 129
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ D + + +I++ +I +V+ TGGDP +LS + L ++ LR I HV+++RF +R
Sbjct: 130 KL--RFDLDQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTR 187
Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
I PQRI +L++ L + P++I NHP E +++ A+ L G+ + +Q+V
Sbjct: 188 TIINLPQRITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAV 247
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKI 301
LLKGINDD + L + V RI+PYYL + + A G HFR +E+G +++ L+
Sbjct: 248 LLKGINDDVDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHT 307
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYP 348
+GL +P Y+ + GK+ + + + + Y + ++ P
Sbjct: 308 TGLARPTYV--IATNIGKIPLMGNDYMIEKTEKEYRLRNYLGEETILP 353
>gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
Length = 328
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDNEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct]
Length = 363
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 4/322 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 39 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 98
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 99 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 156
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 157 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 216
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 217 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 276
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 277 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 334
Query: 307 PFYILDLPGGYGKVKIDTHNIK 328
P ++PG K + H+
Sbjct: 335 PVLTKEIPGYPSKKWLSFHSYP 356
>gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
DSM 5631]
Length = 368
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 106/321 (33%), Positives = 184/321 (57%), Gaps = 8/321 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + + +L I ++ ++++++ + + +T +LI+ ++ NDPI R IP +
Sbjct: 9 RNVRTVDELKEYVNIPQDVEEKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPD 68
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL+ L + D G++ ++ ++G+ H+Y + L+ + C VYCR+CFR+ MVG + V
Sbjct: 69 ELSCLEGD-YDTSGEHENTKMRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEV 127
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ + + A+ YI+E ++ V+ +GGDP +L +K +++ L L I H+ +RF SRVP
Sbjct: 128 I--RRLDRAVKYIEEHEEVTNVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVP 185
Query: 186 IVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+ P R+ + +L + L E K +Y+ H NHP EF+EE+ AI RL + GI++ +Q+V
Sbjct: 186 VTFPMRLNDDDLPEILGEFAELKRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAV 245
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI 301
LLKG+NDDP LA L R V I PYY+ F++ ++EG KIV K +
Sbjct: 246 LLKGVNDDPYTLAELHRLLVRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAML 305
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
G + F + + GK++I
Sbjct: 306 DGHSKRFRYI-MSHRTGKIEI 325
>gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp.
novicida U112]
gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112]
gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
subsp. novicida FTE]
Length = 328
Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ + + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR H+R+PI
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHTRIPI 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIITLNQSTLLKY 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
684]
Length = 393
Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 13/331 (3%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q L + +TS +L + ++ +++ ++ + + + +LI+P++ +DPI +
Sbjct: 21 WQKELSN-NITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRK 79
Query: 59 QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+P EEL + + E +DP GD+ H GI+H+Y L+ C +YCR CFR+
Sbjct: 80 LAVPAAEELVVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRK 139
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
MVG + ++ A YI +I V+ +GGDPL+L ++K+L L I H+
Sbjct: 140 RMVGLPNHQTV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHL 197
Query: 176 QILRFHSRVPIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLAN 232
+R SR P+V P R + ELI L++ G K + + H NHP E + EA AI R+
Sbjct: 198 NFVRIGSRAPVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVRE 257
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQ 291
AG+ + +Q+V L G+NDD E L LM + + + PYYL+ HF++ ++ G
Sbjct: 258 AGVTVNNQAVFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGV 317
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
IV + ++ G + + + GK++I
Sbjct: 318 DIVDEARRRMDGYAK-RFKFIIGHDIGKLEI 347
>gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp.
holarctica LVS]
gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp.
holarctica FSC200]
gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp.
holarctica URFT1]
gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp.
holarctica URFT1]
gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 328
Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL +C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 368
Score = 351 bits (902), Expect = 9e-95, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 9/315 (2%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + +E+ ++ E+ ++ +LI+ ++P DPI + IP EL
Sbjct: 9 DITKVPGLSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEE--W 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
R D G+ + G+ H+Y L+ + +C +CR+CFR+ + + ++ D +
Sbjct: 67 GRLDASGEARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIFMNGGAREVAR-DID 125
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L YI +I V+ +GGDPL LS RL+K++ +R I HVQI+R ++VP +P RI
Sbjct: 126 VDLEYISSHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRI 185
Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
+ +L + ++ K +YI NHP E +E+AI A++ L +G + +Q+ LL GI
Sbjct: 186 LNDTKLPEIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGI 245
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND+PE +A L R + I PYY+ G F + +E+G I+ K SGL +
Sbjct: 246 NDNPETMAELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAK- 304
Query: 308 FYILDLPGGYGKVKI 322
+ + GK+ +
Sbjct: 305 RFTFAMSHVCGKIAV 319
>gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP]
gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 330
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+L + + + + + + A + + DP+ Q + ++E
Sbjct: 17 AFKDPVELLHFLELDPGLFQADIQARRLFPLRVPRPFAVKMRKGDRYDPLFLQAMSLQDE 76
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+DP+ + +SP I+H+Y +R+L + + C + CR+CFRR ++ +
Sbjct: 77 FVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCFRRHFPYAEVKS-- 133
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ LAYI + ++ EVIF+GGDP++ L +L + I H++ LR H+R+P+
Sbjct: 134 GPLAWQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQIPHIKTLRIHTRLPV 193
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RIN +L L ++ + + H NH E + + IS L A + +L+Q+VLLKG
Sbjct: 194 VIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQANVTVLNQAVLLKG 253
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND+ + L L I PYYLH D G SHF + ++ I L+ SG
Sbjct: 254 INDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALVIYKELQRISSGYLV 313
Query: 307 PFYILDLPGGYGKVKID 323
P ++ K I
Sbjct: 314 PKLAREIAQQPNKTLIS 330
>gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp.
PRwf-1]
gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1]
Length = 372
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 5/327 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + +T L + I + + + + + + + NDP+ Q
Sbjct: 43 WQTQVADVITDIDQLLAILELS--HIKDELYVPQGFGLRVPKAFVAKMKKGDANDPLLLQ 100
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P K+E + DP+ +N H+P+KG++H+Y R+L+ + C ++CR+CFR+
Sbjct: 101 VLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCRYCFRQHF-- 158
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + S YI++ +I EVI +GGDPL ++++RL L+ L + + +R
Sbjct: 159 DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALEDLPQINTIR 218
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+ IV P R++ EL+ L+ + + + +H NH E + GI LL+
Sbjct: 219 LHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHARQKGITLLN 278
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL G+ND + L E + PYYLH D AG +HF + ++ + +
Sbjct: 279 QTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQAIDLYWQMLA 338
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
+ G P + +LP K +D ++
Sbjct: 339 HLPGYLVPKLVQELPHKPFKTPVDLYH 365
>gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
16069]
Length = 349
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 97/330 (29%), Positives = 154/330 (46%), Gaps = 9/330 (2%)
Query: 1 MQLR------HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
Q R + ++S +L + + + + + + + + NPND
Sbjct: 15 WQEREWKKLLSQAISSPFELLSRLNLTTDDLPYTVLAEHQFMQKVPAPFVECMEKGNPND 74
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ RQ + +E + DP+ + N S + G++H+Y R+L+ L C + CR+CFR
Sbjct: 75 PLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCRYCFR 133
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
RE + + Y+ +I EVI +GGDPL ++ L+ ++ L I
Sbjct: 134 REFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLERIPS 191
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+ LR H+R+P+V PQR+ LI L + + +H NHP E E A+ RL G
Sbjct: 192 IIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRLHQNG 251
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
I LL+QSVLL G+N++ LA L I PYYLH D G HF + + KI+
Sbjct: 252 IHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQAIKIM 311
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
L +++G P + + G K ID
Sbjct: 312 QELNTRLAGFLVPKLVREEAGKTSKTPIDL 341
>gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 313
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 2/315 (0%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + L + + + + + + + + +DP+ RQ +P E+
Sbjct: 1 MRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+P D +GD G++ +Y R LL C V+CR+CFRR +++ +
Sbjct: 61 QPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEE--TAA 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV
Sbjct: 119 RDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIV 178
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
P+R++ L+ L+ P +HANH EF A+ L + G LL+Q+VLL G+
Sbjct: 179 LPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGV 238
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
ND + LA L + PYYLH D AG +HF + + + L ++SG P
Sbjct: 239 NDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVP 298
Query: 308 FYILDLPGGYGKVKI 322
+ ++PG GK +
Sbjct: 299 RLVREIPGDTGKRPL 313
>gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
Length = 342
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 2/321 (0%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
Q+ + + ++L + + + + + + + + + +DP+ RQ +
Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 83
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++
Sbjct: 84 PIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
S A+++ I EVI +GGDPL LS +L ++ LR H++ LR H
Sbjct: 144 D--TASHDRWRETAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321
Query: 302 SGLCQPFYILDLPGGYGKVKI 322
SG P ++ ++PG K +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342
>gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 328
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407]
Length = 487
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 25/351 (7%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIG 79
+ + D + ++ + A P + + IN +P NDPI RQF+P K + P+ D +
Sbjct: 120 QTREDLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRMIPDHPKLTLDSLH 179
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA 133
++ SP+ G+V+RYP++ L VCP YC FC R VG +V + + E
Sbjct: 180 ESADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEE 239
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
AYI+ + + +++ +GGD L+ +L V + L + +++ RF S+ V P RI
Sbjct: 240 VFAYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARIL 299
Query: 194 PE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
L ++AGK + + H NHP E S A +L+ AGI++ +Q+VL
Sbjct: 300 DAEDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVL 359
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
L+G+NDD ++ L+R + I PYY++ D+ H R ++ I A ++ I+G
Sbjct: 360 LRGVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAG 419
Query: 304 LCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
P +++DLPGG GK +H + G + D N V++Y
Sbjct: 420 FMMPQFVVDLPGGGGKRLACSHLDYDRNTGVSRFMAPAVTGRDKDNKVYEY 470
>gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1]
gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 336
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 89/329 (27%), Positives = 168/329 (51%), Gaps = 6/329 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + ++S +L+ + + ++ + + + + + I +DP+ RQ
Sbjct: 7 WQQQLSQLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQ 66
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+PQ EL P+ DP+ + + +P +G++H+Y R+L+ C + CR+CFRR
Sbjct: 67 ILPQGLELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHFPY 126
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ LS + + +++ ++ EVIF+GGDPLI S+ RLQ+ + L + ++ +R
Sbjct: 127 --EDNQLSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIR 184
Query: 180 FHSRVPIVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
FH+R P+V P RI+ L+ + ++G+ + +H+NHP E A+ +L +A +
Sbjct: 185 FHTRTPVVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVT 244
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L +Q+VLL+G+ND + A L + + PYYLH D AG F + E ++
Sbjct: 245 LFNQAVLLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQ 304
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ ++ G P ++PG K + +
Sbjct: 305 MAARLPGFLLPRLAREVPGAPAKQILAPN 333
>gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020
gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 337
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 2/287 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + A+ + ++P DP+ Q I + +E + EDP+ + L G++H+
Sbjct: 49 KVFPFRVPYSFASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y DR+L L C + CR+CFR+ + + K+ L YI + ++ EVI +GG
Sbjct: 109 YKDRVLWILKTNCAINCRYCFRKHFPYEKNKG--NKKNWIQILHYISQNIELNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL+ L ++ +L IKH++ LR H+R+PIV P RI +L Q + + I H
Sbjct: 167 DPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E +E+ ++ +L + +ILL+QSVLLK IND+ ILA L E I PYYLH
Sbjct: 227 INHPQEINEQLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
D GTSHF ++ ++ + I++ L + ISG P + D K
Sbjct: 287 ILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLVPRLVFDNGSKDNK 333
>gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
Length = 338
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++
Sbjct: 43 ASEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C V+CR+CFRR + + + D YI+ I E+I +
Sbjct: 103 HKYQSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWPNIKNYIEANPHINEIILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL LS++++ L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + +
Sbjct: 161 GGDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332
>gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
BAA-613]
Length = 419
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 172/327 (52%), Gaps = 14/327 (4%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61
LR+ +T AQ+L + ++ + + I + + +T +LI+ +NP DP+ R I
Sbjct: 61 LRN-NVTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSI 119
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + D G+ +++ L G+ H+Y L+ H C +YCR CFR+ +VG
Sbjct: 120 PSIRETDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGIS 177
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
G + + AYI +I V+ +GGD + S++ +++ L+ IKH+ ++RF
Sbjct: 178 GGETAG--NVDQMAAYIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFG 235
Query: 182 SRVPIVDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+R P+V P RI +PEL+ L K +Y+ NH E + +A+ AI L +AGII+
Sbjct: 236 TRTPVVLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIV 295
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVAS 296
+Q+VLLKGINDD L L++ + PYY+ +G S F++ + EG +IV
Sbjct: 296 KNQTVLLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEE 355
Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322
K +G + Y + GK++I
Sbjct: 356 AKNMQNGQGKCIRYA--MSHVTGKIEI 380
>gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
Length = 368
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 163/325 (50%), Gaps = 10/325 (3%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
++ K +TS L N + ++ + ++ +++ + +LI+ + DPI +P
Sbjct: 1 MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL DP + +++ G+ H+Y LL L VC CRFCFR+ + S +
Sbjct: 61 DPRELES--GGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ +D +AYI+E ++I V+ TGGDPL L + L+ VL+ LR I HV I+R S
Sbjct: 119 RETV--RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIGS 176
Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
++ +P RI + EL+ L K +Y+ H NHP E ++ +I A L A +I+
Sbjct: 177 KMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVIV 236
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++Q+ +L GIN + E L L R I PYY+ A G F++ +EE IV
Sbjct: 237 VNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQGA 296
Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
+ SGL + + + GKV++
Sbjct: 297 WKNCSGLAKRARFI-MSHSTGKVEV 320
>gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 338
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q L + + ++L + + + +++ + + + +DP+ RQ
Sbjct: 18 WQRLWREAVRDPRELLALLGLDEAAARISGAAAGQFAMRVPRGFIARMRHGDLHDPLLRQ 77
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P +E I+P D +GD G++ +Y R LL C + CR+CFRR
Sbjct: 78 VLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYCFRRHFPY 137
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A+A I I EVI +GGDPL L+ +L ++ L I H++ LR
Sbjct: 138 AEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATIPHIRRLR 195
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
HSR+P+V P+RI+ ++ + PV IHANH EF A+ RL AG LL+
Sbjct: 196 IHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQAGAQLLN 255
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL+G+ND + LA+L + PYYLH D G +HF + E +++ L
Sbjct: 256 QAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARELHRQLAA 315
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++SG P + ++ G GK +
Sbjct: 316 RLSGYLVPKLVREVQGDPGKRPL 338
>gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148]
gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148]
Length = 346
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%)
Query: 1 MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + S + L + + + + + + + + + + +P+DP+ RQ
Sbjct: 13 WQAELQAVVRSGRQLLSQLGLDAQAVGYSELAGEDFPLKVPQSFISRMTHGDPDDPLLRQ 72
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ EL +P +DP+G+ S G++ +Y R LL L C + CR+CFRR
Sbjct: 73 VLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINCRYCFRRHFP 132
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
++ S ++ A+ +I + I EVI +GGDPL++S ++L+ ++ L I H+Q L
Sbjct: 133 YNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQLAAIPHLQRL 190
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSR+PIV P R+ L+ L + +H+NH E + E A+ +L++ I LL
Sbjct: 191 RVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQKLSSGKITLL 250
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND + LA+L + PYYLH D G +HF +T G +++ L+
Sbjct: 251 NQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARRGLELITQLE 310
Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323
++ G P + + G KV++
Sbjct: 311 NRLPGYLVPRLVREDAGELAKVRVT 335
>gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022
gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 340
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 169/320 (52%), Gaps = 3/320 (0%)
Query: 7 TLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+T+ +L + + + ++ +S+ + + + ++P DP+ Q +P +
Sbjct: 21 AITNPDELLRTLNLKSNTKYFKNIQVQKLFSLRVPKTFVSRMKKNDPFDPLLLQILPHTK 80
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
EL +DP+ + + + G++ +Y +RILL L C + CR+CFRR SQ
Sbjct: 81 ELKNNHNFVQDPLEETKNVIIPGLIRKYNNRILLLLKTNCAINCRYCFRRYFPYSQHPG- 139
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ ++ A+ YI+ ++ + EVI +GGDPL+ +Q ++ TL I H++ LR H+R+P
Sbjct: 140 -NKENLNLAIQYIKNQTDLNEVILSGGDPLMAKDHEIQWIVNTLSNIYHIKRLRIHTRLP 198
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
IV P RI L + L + I H NH E + E I++L GI LL+QSVLL+
Sbjct: 199 IVIPSRITNNLCKILSTTRLKILIVTHINHAQEINHELQYNINKLHKLGITLLNQSVLLR 258
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
GIND+ +IL+ L ++ I PYYLH D T+HF ++ ++ IV L ISG
Sbjct: 259 GINDNAKILSQLSNKLFDINILPYYLHILDKVKSTTHFYVSEKQASIIVVELLSMISGFL 318
Query: 306 QPFYILDLPGGYGKVKIDTH 325
P + + PG K+ I+ +
Sbjct: 319 VPKLVCEHPGKNSKIYINLN 338
>gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
Length = 324
Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 173/314 (55%), Gaps = 5/314 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+TP L + + +ARQ P E LP E DP+ D HSPL +VHRYP
Sbjct: 3 LPFLVTPYYRRL---ADAHPALARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR L+ + C YCRFCFRR S ++ ++ +A LAY++E ++ EV+ +GGDP
Sbjct: 60 DRALILVTDRCAAYCRFCFRRHFTASGASSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPARITARLARI-LAAARPLWVVTHFN 177
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ +
Sbjct: 238 DLAAGTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297
Query: 335 YCITDHHNIVHDYP 348
Y + ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311
>gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 328
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 4/316 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+R+ +L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERMTNKLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311
Query: 310 ILDLPGGYGKVKIDTH 325
++PG K + H
Sbjct: 312 TKEIPGYPSKKWLSFH 327
>gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)]
Length = 337
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 2/313 (0%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++T ++L ++ + + + + + + ++P DP+ Q I E
Sbjct: 23 SITEPKELLKILNLENHPQYYTSKFNTLFPFRVPHSFVSRMKKNDPQDPLLLQVIINNRE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
P+ +DPI + H L G++H+Y DR+LL + C ++CR+CFR+ +
Sbjct: 83 FLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHCRYCFRKYFPYEKNQG-- 140
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
S + +L YIQ+ + EVIF+GGDPLI L ++ +L I H++ LR H+R+PI
Sbjct: 141 SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSLSKINHIKRLRIHTRLPI 200
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P RI L + ++ + I H NHP E ++ ++ +L +G+I+L+QSVLLK
Sbjct: 201 VIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLKLKESGVIMLNQSVLLKN 260
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDDP ILA L + I PYYLH D GT HF ++ ++ + I+ SL + ISG
Sbjct: 261 INDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKKAKSIMKSLIKMISGYLI 320
Query: 307 PFYILDLPGGYGK 319
P + D K
Sbjct: 321 PRLVQDTGSQNSK 333
>gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1]
Length = 328
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E
Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K +
Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIP 130
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWSKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPV 190
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308
Query: 307 PFYILDLPGGYGKVKIDTH 325
P ++PG K + H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327
>gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169]
gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1]
gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1]
gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1]
gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7]
gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1]
Length = 356
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
D G +HF + I + + L E + G P + + P K ID +
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341
>gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72]
gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E]
Length = 356
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
D G +HF + I + + L E + G P + + P K +D +
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341
>gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
Length = 356
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
D G +HF + I + + L E + G P + + P K +D +
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341
>gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
Length = 304
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 132/293 (45%), Positives = 197/293 (67%), Gaps = 5/293 (1%)
Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
+ Y + ++ + +LIN IARQF+P ++EL + PEE DPIGD HSP+ +VH
Sbjct: 2 TRDYPVRISKTMNDLINHSAA---IARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLVH 58
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY +R+L K+ VC V+CRFCFRRE++G QKG+ + A Y+++ +I EVI +G
Sbjct: 59 RYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILSG 117
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDP+ LS +RL+ + L I+H++ +R H+R+PIV P++I E + L++ GK + +
Sbjct: 118 GDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYVL 177
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NH EF+ + + ++RLA + LLSQ+VLL+G+NDD +LA LM F+ RIKPYYL
Sbjct: 178 HVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYYL 236
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
HH DLA GT HFR+TI+EG+ I L++ +SG+ P YI+++PGG GK+ + T
Sbjct: 237 HHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289
>gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira
halophila SL1]
gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1]
Length = 342
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 6/319 (1%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+ ++L + + + ++ + + + + I P +PNDP+ RQ +P E
Sbjct: 28 AIRQPEELLRRLDLPESLLAPAEQAARTFPMRVPVPYLARIRPGDPNDPLLRQVLPIGAE 87
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
L P DP+ + G++ +Y R LL C ++CR+CFRR +++
Sbjct: 88 LETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCAIHCRYCFRRCFPYNREAG-- 145
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
AL +++ EVI +GGDPL+L + L L+ L I V+ +R H+R+P+
Sbjct: 146 ----WRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACLERLGRIAAVRRVRIHTRLPV 201
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
V P R+ L + L + I +HANHP E E +A++RL N +L+Q+VLL+G
Sbjct: 202 VIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSALARLRNVCSTVLNQTVLLRG 261
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDD LA+L + PYYLH D AG +HF + + GQ++ A L + G
Sbjct: 262 VNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVDAKTGQRLWAELARSLPGYLV 321
Query: 307 PFYILDLPGGYGKVKIDTH 325
P + PG K I
Sbjct: 322 PRLAREEPGAAAKTVITPD 340
>gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 181/322 (56%), Gaps = 11/322 (3%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++++ L + + E +++EI + + +T +LI+ ++PNDPI R +P +EE
Sbjct: 10 SISTISQLGDYIELTPEMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN+L D G+ ++ + G+ H+Y L+ + C YCR+CFR+ +VG +L
Sbjct: 70 LNLLGSY--DTSGERENTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEIL 127
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ A+ YI+ +I V+ +GGDP +LS +++ L+ L I H+ +RF +RVP+
Sbjct: 128 QRFN--DAVKYIENHEEINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPV 185
Query: 187 VDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P RI + EL+ L++ + +Y+ NHP E +++A A+SRL +G+IL +Q+
Sbjct: 186 TFPDRIIEDDELLTLLEKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQT 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKEK 300
VLLKG+NDDPE LA L V + + PYY+ +F++ + +G +IV K+K
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKK 305
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
++G + + + GK++I
Sbjct: 306 LNGHSK-RFKYIMSHQTGKIEI 326
>gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
Length = 338
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + ++ +P DP+ Q +P EL PE DP+G+ + + G++
Sbjct: 43 ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C ++CR+CFRR + + + D E YI++ I EVI +
Sbjct: 103 HKYQSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI LK + + +
Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L + R+ PYY
Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244]
gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244]
Length = 338
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
S + + + ++ +P DP+ Q +P EL PE DP+G+ + + G++
Sbjct: 43 ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H+Y R LL L C ++CR+CFRR + + + D E YI++ I EVI +
Sbjct: 103 HKYRSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI LK + + +
Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L + R+ PYY
Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
LH D G HF L E I + + + G P + ++ G K +
Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332
>gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1]
gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8]
Length = 345
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+
Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
D G +HF + I + + L E + G P + + P K ID +
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341
>gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
Length = 471
Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 22/346 (6%)
Query: 1 MQLRHKTLTSAQDLYN--ANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
Q++ +++T L A+L + + +++E + ++P + LI+ P DP
Sbjct: 65 WQMK-RSVTKVDKLLAGLADLASEAFVADLREGFRRAPMAVRVSPYMIALIDWSKPYADP 123
Query: 56 IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
I RQFIP EL P+ D + + +P+ G+ HRYPD+ L L CPVYCRFC R
Sbjct: 124 IRRQFIPTGSELLPDHPKLDLDSLHEQADAPVPGLTHRYPDKALFLALDTCPVYCRFCTR 183
Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
VG V ++ EAA YI + ++ +++ +GGD L ++ + +
Sbjct: 184 SYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELEDIVISGGDSYNLRADHIKTIGER 243
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
L + +++ +RF ++ P V PQ+I + + L ++ K V I H NHP E
Sbjct: 244 LLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSIHEQGRKLHKEVCIHTHFNHPNEI 303
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
++ + A++ L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G
Sbjct: 304 TQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQLVKRLAHVNVHPYYVYVHDLVRG 363
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ R T++ I ++ +G P +++D PGG GK ++
Sbjct: 364 VENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGGGGKRDAHSY 409
>gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila
DSM 6578]
Length = 324
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 119/314 (37%), Positives = 175/314 (55%), Gaps = 5/314 (1%)
Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
+TP L + H P +ARQ P E LP E DP+ D HSPL +VHRYP
Sbjct: 3 LPFLVTPYYRRLADTH-PA--LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
DR L+ + C YCRFCFRR S + ++ ++ +A LAY++E ++ EV+ +GGDP
Sbjct: 60 DRALILVTDRCAAYCRFCFRRHFTASGESSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRITARLARI-LAAARPLWVVTHFN 177
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ +
Sbjct: 238 DLAAGTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297
Query: 335 YCITDHHNIVHDYP 348
Y + ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311
>gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
15053]
Length = 393
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 19/349 (5%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q LRH +T+ +L + I Y +++ +LIN + D I +
Sbjct: 32 WQDELRH-NITTLDELAAYIPGIDTGDCNARNILEKYPMSVPRYYLSLINTDDEGDCIRK 90
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP E++I D G+++++ L+G+ H+YP +LL + C +YCR+CFR+ MV
Sbjct: 91 MSIPSFSEMDITGTF--DTSGESSNTKLRGLQHKYPQTVLLLSTNRCAMYCRYCFRKRMV 148
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GS ++ +D + A++YI E ++I V+ +GGD +L + ++ L L I H+ +
Sbjct: 149 GSHTEEIV--EDIDKAVSYIAEHTEISNVLISGGDSFLLDNAAIEHYLSALCSIGHIDYI 206
Query: 179 RFHSRVPIVDPQRINP--ELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
RF ++VP+V PQRI EL LK+ K +Y+ NHP E +E A+ A++ L + G
Sbjct: 207 RFGTKVPVVFPQRITDDRELQDILKKYCTKKQLYVMTQFNHPSELTEHAVNAVNCLKSLG 266
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293
+I+ +Q+VLLKGINDDP +LA LM+ F ++ I PYY+ G + F++ + G I
Sbjct: 267 LIVKNQTVLLKGINDDPAVLAGLMKQFTKIGILPYYVFQCRPVTGVKNQFQVPLRTGYDI 326
Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
V K +G + Y L P GKV+I I K+ + H
Sbjct: 327 VEQAKRLQNGNGKCFRYALSNP--DGKVEI----IGKMDDSHMIFKYHQ 369
>gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora]
Length = 517
Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 107/342 (31%), Positives = 177/342 (51%), Gaps = 25/342 (7%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88
+ +I +TP I + +N +P +DPI RQF+P K L P+ D + + SP+KG
Sbjct: 171 TAATMAIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 230
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
+VHRY D+ L VCP YC FC R VG+ TV + + E A AYI+ +
Sbjct: 231 LVHRYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRP 290
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199
++ +++ +GGD L ++L + + L + +++ RF S+ V P RI E +
Sbjct: 291 ELQDIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNA 350
Query: 200 L-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L K+AGK + + H N+P E S + A +L G+++ +Q+VLL+G+NDD E
Sbjct: 351 LIDISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYE 410
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
++ L+R + I PYY++ D+ H R ++ + A ++ I+G P +++D
Sbjct: 411 TMSTLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVD 470
Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
LPGG GK +H +K G ++ D N V++Y
Sbjct: 471 LPGGGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512
>gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 328
Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 4/316 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ R HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+R+ L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERMTNRLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311
Query: 310 ILDLPGGYGKVKIDTH 325
++PG K + H
Sbjct: 312 TKEIPGYPSKKWLSFH 327
>gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47_FAA]
gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
bacterium 1_7_47FAA]
Length = 387
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 18/349 (5%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIAR 58
+ +T +T A +L + Q++ + I + + + +T +LIN NP DP+ R
Sbjct: 23 WKEEVRTNITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFR 82
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP EE ++ + D G+ +++ + G+ H+Y L+ H C +YCR CFR+ +V
Sbjct: 83 MCIPSIEETDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLV 140
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G + E AY+ + S+I ++ +GGD + S++ +++ L+ I H+ ++
Sbjct: 141 GISDDETA--DNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLI 198
Query: 179 RFHSRVPIVDPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
RF +R P+V P RI +PEL+ LK K +Y+ NHP E + EA AI L ++G
Sbjct: 199 RFGTRTPVVLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSG 258
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293
I++ +Q+VLLKG+ND+ + L L++ + PYY+ +G + F+L +++G +I
Sbjct: 259 IVVKNQTVLLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEI 318
Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
V + K +G + Y + GK++I + + +G H
Sbjct: 319 VEAAKHLQNGQGKCIRYA--MSHVTGKIEI----LGPMPDGQMLFKYHQ 361
>gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021]
gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021]
Length = 297
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 3/281 (1%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q +
Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E DP+ + N + + I+H+Y +R+L C V CR+CFRR +
Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIATHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
LLK +NDD +IL L + I PYYLH D G SHF
Sbjct: 257 LLKSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHF 297
>gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
Length = 363
Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats.
Identities = 109/340 (32%), Positives = 187/340 (55%), Gaps = 16/340 (4%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+T+ +L + E D ++ N Y +++ +L+NP + NDPI + IP E+
Sbjct: 11 VTTLDELSASIPQINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEM 70
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
++ D G+++++ L+G+ H+YP +L+ + C +YCR+CFR+ MVGS V++
Sbjct: 71 DLAGTF--DTSGESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGSGTQEVVA 128
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
D + A++YI + +I V+ +GGD +L +++ L +L I H+ +RF ++ P+V
Sbjct: 129 --DIKEAISYILKHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVV 186
Query: 188 DPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
PQRI + L L+E G K +YI NHP E +E++I+A+ L G+I+ +Q+VL
Sbjct: 187 FPQRILEDSRLQDILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVL 246
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKIS 302
LKG+ND PE LA L R F EL I PYY+ G + F++ ++ G I+ K +
Sbjct: 247 LKGVNDCPETLARLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQN 306
Query: 303 GLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
G + ++L P GK++I + + +G H
Sbjct: 307 GNGKCFRFVLSNP--DGKIEI----LGRTADGQMVFKYHQ 340
>gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2]
gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2]
Length = 323
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 7/317 (2%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ S + L + + + + + + + + AN I +PNDP+ +Q +P E
Sbjct: 2 IQSVEQLCDFVDLSADDLPI--DFDSAFPFKVPKHFANQIEKGSPNDPLLKQILPGLAEQ 59
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ P DP+GD +P ++H+Y R LL C ++CR+CFRR Q
Sbjct: 60 ELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIASPRCDIHCRYCFRRHFPYEQ----AK 115
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ +AAL I + I EVI +GGDP+ LS L +++ + I HV LR HSR PIV
Sbjct: 116 KQHWQAALENIAQDHSITEVILSGGDPMTLSENTLIELVHEIEAIPHVSTLRMHSRTPIV 175
Query: 188 DPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
PQ+ + P L++ L ++ + +H NH E + E+ + + + + LL+Q+VLLKG
Sbjct: 176 APQKAHRPTLLKALSKSRLQTVLVVHCNHANELTPESADLMQQFRQSNVFLLNQTVLLKG 235
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
IND + L+ L + I PYY H D +G+ HF + + I L++ + G
Sbjct: 236 INDSADTLSALSKKLFSQGILPYYCHLLDKVSGSGHFDVQKHQAWAIFDQLRQALPGYLV 295
Query: 307 PFYILDLPGGYGKVKID 323
P ++ ++ G K +
Sbjct: 296 PRFVEEIAGEPYKTLLT 312
>gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
petrolearius DSM 11571]
Length = 358
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 15/324 (4%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ LTS ++ + ++ + N++ +LIN +P DPI + IP
Sbjct: 4 NACLTSIAEVNRQF---DAGLSGLEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNS 60
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+ DP + ++ G+ H+Y L+ + C +CRFCFR+ + +
Sbjct: 61 AEMVK--WGSLDPSMEARNTKSPGLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDE 118
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ +D + YI+ +I V+ +GGD L++ RL K++ L IKHV+ +R +++
Sbjct: 119 KI--RDLSTDIDYIRSHPEISNVLLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKM 176
Query: 185 PIVDPQRINPE--LIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
P +P RI + L ++E +GK +Y NHP E ++EA A+ L +G L +
Sbjct: 177 PAYNPFRITGDESLQAMIQENSRSGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLAN 236
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+ +L G+N+DPE L+ L E PYYL AAG HF + +E +I K
Sbjct: 237 QTPILNGVNNDPETLSGLCSNLAEAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKR 296
Query: 300 KISGLCQP-FYILDLPGGYGKVKI 322
+SGL + Y+ + GK+++
Sbjct: 297 SLSGLAKRARYV--MSHATGKIEV 318
>gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium]
Length = 314
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 98/284 (34%), Positives = 161/284 (56%), Gaps = 6/284 (2%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
H+ I + ANLI+ +NP DP+ +Q I + P+ D +++P++G++H+
Sbjct: 31 QHFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGSSEFFLS-PLDDESNAPVEGLIHK 89
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP+R+LL VC ++C++CFR+ ++ + + A YI+ +QI EVI +GG
Sbjct: 90 YPNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGG 146
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL LS ++LQ +++ + I H++ LR HSR +V P RI +L Q L + V + +H
Sbjct: 147 DPLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLH 206
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+NH E S E + I +L+ I LL+QSVLLKG+ND + L++L + + PYYLH
Sbjct: 207 SNHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLH 264
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
D +G HF + + +++ LK+ +SG P + D G
Sbjct: 265 LLDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGE 308
>gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523]
Length = 328
Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 4/316 (1%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
S +L I Q +++ + + + AN I N NDP+ +Q +P +E I
Sbjct: 16 SPLELLEFLQIDINQARVSIDVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVI 75
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + K
Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRK 133
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLQAFEYIANDQSIEEVILSGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLP 193
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+RI +L++ L E + IH NHP E + + + GII+L+QS LLK IND
Sbjct: 194 ERITTKLLRVLSEHRLDTILVIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDIND 253
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMVPVL 311
Query: 310 ILDLPGGYGKVKIDTH 325
++PG K + H
Sbjct: 312 TKEIPGYPSKKWLSFH 327
>gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 364
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 103/326 (31%), Positives = 177/326 (54%), Gaps = 14/326 (4%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQ + LTS + + N EQI E+K++++ Y LIN ++P+DPI R
Sbjct: 1 MQ-KPTYLTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRII 56
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P EEL+ + D ++ ++ G+ H+Y D LL + VC +CRFCFR+ + +
Sbjct: 57 LPDFEELDEWGD--LDASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFST 114
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ V++ D + YI++ +I V+ TGGD LILS ++L +++ LR I HV I+RF
Sbjct: 115 ENKEVVN--DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRF 172
Query: 181 HSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
S++ +P RI +P+L +K+ K +YI H NHP E ++EAI ++ L +AG
Sbjct: 173 GSKMVAFNPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGA 232
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++ +Q+ +++G+ND E++ L R + I PYY+ G + + E G +I
Sbjct: 233 VICNQTPMIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFK 292
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVK 321
+ +SGL + + + GK++
Sbjct: 293 KSIDSVSGLAKRARFV-MSHATGKIE 317
>gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
6068]
Length = 370
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 20/334 (5%)
Query: 7 TLTSAQDLYNANLIK--KEQIDE----------------IKEISNHYSIALTPVIANLIN 48
+L + +L A + E + + + + + + + I
Sbjct: 39 SLRTLPELLEAVGLTKSPEHLAATSIAGPSGAIDPAFVPLDAAAEQFRVLVPGPYLSRIE 98
Query: 49 PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
NP DP+ Q +P E++ + DP+GD L G++ +Y R L+ L C V+
Sbjct: 99 RGNPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVH 158
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
CR+CFRR + L+ + A+ I + EVI +GGDPL + L ++
Sbjct: 159 CRYCFRRHYPYDETPRGLA--GWQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHR 216
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
I H++ LR HSRVP+V P+R+N ELI ++ Y+ +H NHP E AA++
Sbjct: 217 FAEIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALA 276
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
RL +AGI++++Q+VLL+G+ND+ E L L T V +R+ PYYL D AG +HF +
Sbjct: 277 RLVDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEES 336
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G++++ L+ + G P Y+ ++PG K +
Sbjct: 337 RGRELIEQLRASLPGYAIPRYVAEIPGRSSKSPL 370
>gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon]
Length = 366
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 177/322 (54%), Gaps = 11/322 (3%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
++++ L + +++ ++EI + + + +T +L++ ++P+DPI + +P +EE
Sbjct: 10 SISTIAQLGEYMELDPKKVAILQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEE 69
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN++ D G+ ++ + G+ H+Y L+ + C +YCR+CFR+ +VG ++
Sbjct: 70 LNLVGSY--DTSGERENTIMPGLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIM 127
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ A YI+E +I V+ +GGDP ILS L + L+ L I H+ +RF +RVP+
Sbjct: 128 HRFN--GAAKYIEEHEEINNVLISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPV 185
Query: 187 VDPQRINPELIQCL-----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P RI + + +Y+ NHP E + +A A+SRL AG+I+ +Q+
Sbjct: 186 TFPDRILKDDKLLTLLGNNSHENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQT 245
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEK 300
VLLKG+NDDPE LA L V + + PYYL S+F++ + +G +IV + KE+
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKER 305
Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
++G + + + GK++I
Sbjct: 306 LNGHSK-RFKYTMSHRTGKIEI 326
>gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans]
Length = 595
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 34/369 (9%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61
L+H + + +D + I +K +I LTP I + ++ +NP +DPI RQF+
Sbjct: 115 LKH--IRTKEDFIR------DAISALK--LAPMAIRLTPHILSRVDWNNPLDDPIRRQFL 164
Query: 62 PQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P K + + D + + SP+ G+VHRYP R L +CPVYCRFC R VG
Sbjct: 165 PLKSGMIPDHEHMKLDSLNEEADSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVGG 224
Query: 121 QKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
TV + E YI++ + +++ +GGD L L+++++ L I H
Sbjct: 225 NTDTVAKRAQKPNRARWEVIFKYIEDNDSLQDIVLSGGDIFYLEPHLLREIVERLLSIPH 284
Query: 175 VQILRFHSRVPIVDPQRI---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAI 224
+ +R ++ V P R N + L ++ GK V + H NH E +
Sbjct: 285 IFRIRLATKGLSVAPGRFLDTNDGWMDTLMDISNQGRKLGKQVCLHTHINHASEITWVTR 344
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A RL G+I+ +Q+VLL G+N++P+ + L+ T + I+PYY++ D+ G R
Sbjct: 345 MAARRLFAHGVIVRNQTVLLNGVNNNPDAIKELITTLANINIQPYYVYQCDMVQGIEDLR 404
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHN 342
+ E ++ ++ +SG P +++DLPGG GK + T+ ++ G Y
Sbjct: 405 TPLSEILRLDKLMRGTLSGFMMPAFVIDLPGGGGKRLVSTYESYNEETGLAEYRAPGLPG 464
Query: 343 ----IVHDY 347
+++ Y
Sbjct: 465 QKGEMIYRY 473
>gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 348
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 155/319 (48%), Gaps = 3/319 (0%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ + ++L + + + + + + + I P +P+DP+ RQ +P
Sbjct: 20 RAVRDPRELLQRLDLPMTLLPAAESAARLFPLRVPEPWLARIRPGDPDDPLLRQVLPLAA 79
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E DP+GD G++H+Y R+LL C ++CR+CFRR +
Sbjct: 80 EHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACAIHCRYCFRRHFPY--TESQ 137
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
D A LA++ ++ EVI +GGDPL LS +RL + + L V+ LR H+R+P
Sbjct: 138 AGRDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLATLTEALAQRPQVRRLRLHTRLP 197
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+V P RI P L+ LK V IH+NH E A++RL AG LL+Q+VLL+
Sbjct: 198 VVLPDRITPGLMALLK-GPWEVVWVIHSNHAQELDSTVAGALARLREAGHWLLNQTVLLR 256
Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
INDD + LA L R +L + PYYLH D G +HF +T + + A L ++ G
Sbjct: 257 RINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFEVTELRARALAAELAARLPGYL 316
Query: 306 QPFYILDLPGGYGKVKIDT 324
P + + G K +
Sbjct: 317 VPRLVREEAGEPAKTPVTP 335
>gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
Length = 593
Score = 342 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 111/360 (30%), Positives = 175/360 (48%), Gaps = 21/360 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIA 57
Q+R +S QD + E I ++ +A+ TP I +LIN +DPI
Sbjct: 186 WQIRS---SSTQDYV----TRAEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIR 238
Query: 58 RQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQFIP P+ + D + + + SP+KG+VHRYPD++L VCPVYCRFC R
Sbjct: 239 RQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSY 298
Query: 117 MVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
VG Q TV K E YI ++ +V+ +GGD L +L+++ TL
Sbjct: 299 SVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLL 358
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I H++ +RF S+ V P RI + ++ GK + + H NHP E S A +L
Sbjct: 359 GIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNIALHTHFNHPQEISWITEHAAQKL 417
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
+ + + +Q+VLL +N++ + L+R + I+PYY++ D+ G R + +
Sbjct: 418 FHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDI 477
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCITDHHNI-VHDY 347
I + ++ I+G P +++DLPGG GK T + + G + VH Y
Sbjct: 478 LHIESHIRGTIAGFMTPSFVVDLPGGGGKRLASTFENYDTRTGVSRFLAPGVKGNTVHQY 537
>gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010]
gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010]
Length = 335
Score = 342 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 5/324 (1%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q L + + +A DL + K+ + + + + + + NDP+ R
Sbjct: 14 WQHALSN-AINNADDLLEKLGLSGHLQAIDKDKIRQFPLRVPQSYVDKMRYGDANDPLLR 72
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q P +E DP+GD+ GI+ +Y R LL C ++CR+CFRR
Sbjct: 73 QVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCRYCFRRHFP 132
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S + S + ++ + I EVI +GGDPL L +L K++ L I H++ L
Sbjct: 133 YSDSNPLSS--QWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLAEIPHLKRL 190
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R H+R+PIV P+RIN L+ ++ V + IHANH E A A+ L AG LL
Sbjct: 191 RIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISLKQAGCQLL 250
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL+GIND E L+ L ++ + PYYLH D AG HF + K+V L+
Sbjct: 251 NQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRAVKLVDDLR 310
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ + G P + + G K I
Sbjct: 311 KVLPGYLVPRLVREQQGEASKTVI 334
>gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 345
Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 4/329 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + +L A + E++ + + + + + N DP+ RQ
Sbjct: 16 WQEQLQQAIRTPSELSAALGLTLEELPYSAAADDAFPLLVPAAFVARMEKGNAWDPLLRQ 75
Query: 60 FIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ +E +DP+G+ + ++ G++ +Y R LL C V CR+CFRR
Sbjct: 76 VLAVPQENLPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQCAVNCRYCFRRSYP 135
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
SSK+ AA+ + I EVI +GGDPL+L L + + LR L
Sbjct: 136 YGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAIARRLRGNTRGITL 193
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R H+R+PIV P R+ LI L + V + +H+NHP E + A+ RL + G+ +L
Sbjct: 194 RIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTARALERLRDGGVTVL 253
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLLKGINDD ++LA L PYYLH D AG++HF ++ ++I+ L
Sbjct: 254 NQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEVSELRARQILGQLA 313
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNI 327
K G P +++PG K +I +
Sbjct: 314 SKRPGYLVPKLAVEVPGADSKREIAPDYV 342
>gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978]
Length = 280
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
+N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C
Sbjct: 1 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L
Sbjct: 61 VHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + +
Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178
Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
+ +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L
Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238
Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I + + G P + ++ G K +
Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274
>gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 520
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 13/354 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLRH + + L + + I+++ ++ Y + LTP A+LI P NDP+ Q +
Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ E P +HSP + I YP + +K ++C +YC C R +G+
Sbjct: 217 PTGEMVDNAGVEI--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + AL YI+ +I +V+ TGGD L+L + L+ +L L I+HV++ R
Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQRI+ EL+ L+ + KP+ + N E + + AA ++ +++
Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297
Q+VLLKGIND + L T E ++PYY+ + H R+ + GQ I+ S+
Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-KHLRVPVAVGQSIIESM 452
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350
ISG P Y + GK+ + N+ + G G + YP
Sbjct: 453 YGNISGDAIPRY---IATAGGKIPLHRTNVLEHGQGYVKMQKPWSGEQVSYPDP 503
>gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 334
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 8/317 (2%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q LR + + + L I + Q+ + H+ + + + +PNDP+ R
Sbjct: 16 WQDELR-QAIHNPLHLLELLEIAESQLAHRLMVQPHFKLQVPKGYVARMQKGDPNDPLLR 74
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P +E + DP+GD+ + G++ +Y RIL C ++CR+CFR+
Sbjct: 75 QVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCRYCFRQHYP 134
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+ + L I+ + I EVI +GGDPL+L L ++ K+L I VQ L
Sbjct: 135 TSKTKLY-----YQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLADIPQVQRL 189
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R H+R+PIV P R+N EL+ L E + + +HANH E E +A+ +L AGI +L
Sbjct: 190 RLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKLVTAGITVL 249
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLL+GIND+ L L + R+ PYYLH D G +HF + + +++ ++
Sbjct: 250 NQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTALELLEKMR 309
Query: 299 EKISGLCQPFYILDLPG 315
+ G P + ++ G
Sbjct: 310 VALPGYLVPKLVREVTG 326
>gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
Length = 375
Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 37/375 (9%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
MQ + K + + +K + +E+K++++ ++ +LIN +P DPI R
Sbjct: 1 MQKKVKYIIKLDLIPQ---LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIV 57
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
IP EEL++ + ++ + + G+ H+YPD LL + VC +YCRFCFR+ + +
Sbjct: 58 IPTTEELDV--WGKLHASNESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMN 115
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V +D L YI+ +I V+ TGGDPL+L+ +L+K LK L I HV+I+R
Sbjct: 116 DNDEVA--RDVSEGLEYIRNHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRI 173
Query: 181 HSRVPIVDPQRI--NPELIQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
S++ V+P R+ +P L++ + E GK +Y+ H NHP E ++EA A+ + G
Sbjct: 174 GSKMLAVNPFRVIDDPSLLELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTG 233
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
L +Q+ +LKGIND+ E L L+ + + PYY+ AG + IEE +V
Sbjct: 234 TTLTNQTPILKGINDNEETLRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLV 293
Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGN 332
S++ K+SGL Y+ + GK++I D N I K
Sbjct: 294 ESVRSKVSGLAARVRYV--MSHETGKIEILGKGSDLIFFRYHRAADPENAGKFMIYKRNP 351
Query: 333 GSYCITDHHNIVHDY 347
++ D+ +V +Y
Sbjct: 352 DAHWFDDYKELVEEY 366
>gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
Length = 328
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 111/324 (34%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + +S L N + + + E +S + A + NP DP+ Q
Sbjct: 8 WQKKLAQGFSSVAALLNYLELPCDAGSLLAE--KQFSSRIPLGFAQRMQKGNPQDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ EL I DP+ + + +PLKG++H+Y R+LL L VC V CRFCFRR
Sbjct: 66 VLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLTGVCAVNCRFCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + AYI + S I EVI +GGDPL+ S ++L+ L I HV +R
Sbjct: 126 --QDNNPGRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVFSELLQQLEQIPHVHTVR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILL 238
FH+R+PIV P+RI+ L+ L I +H NHP E +E A+ L AG LL
Sbjct: 184 FHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDDEVRHALRALRQAGCHLL 243
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Q+VLL GIND+ ILA L + + PYYLH D G +HF L + Q I L+
Sbjct: 244 NQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAAHFDLPLATVQTIYQQLQ 303
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ + G P + PG K +
Sbjct: 304 QLVPGYLLPRLACEEPGKLSKTLL 327
>gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 370
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 32/362 (8%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + ++++ + + + +L+N +P+DPI R IP +EL+
Sbjct: 9 DINKVPGLTGRDLEQLAPVMDTFEFRSNEYYLSLVNWDDPDDPIRRIIIPSVQELDQ--W 66
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT 131
R D + ++S L G+ H+Y + C +CR+CFR+ + ++ VL+ D
Sbjct: 67 GRLDASNEQSYSVLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DL 124
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+AA Y++ +I V+ TGGD L+LS RL+K++ LR I HV+I+R +++ P R
Sbjct: 125 DAACDYVRNHPEINNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYR 184
Query: 192 I--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + EL++ +K+ P +Y H HP E ++ ++ A RL AG IL +Q+ +L+G
Sbjct: 185 VLNDQELLEMVKKYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRG 244
Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
+NDDP++L L + + PYY+ G + + +EE + + + SGL +
Sbjct: 245 VNDDPQVLGELFNRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGLGK 304
Query: 307 PFYILDLPGGYGKVK----------------IDTH-----NIKKVGNGSYCITDHHNIVH 345
L + GK++ D +I +Y D+ IV
Sbjct: 305 RAK-LAMSHASGKIEALAMTDENIIFRYHRAADPDESGKVHICTRNPRAYWFDDYKEIVE 363
Query: 346 DY 347
Y
Sbjct: 364 TY 365
>gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
Length = 427
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 112/374 (29%), Positives = 176/374 (47%), Gaps = 25/374 (6%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSI--ALTPVIANLINPHN-PNDP 55
Q H +T L + I +++ + +TP + NLI+ N DP
Sbjct: 18 WQ-DHHAVTRVDQLREWMGADADGNLIRDVERGLARAPMALRITPYLLNLIDWSNFLEDP 76
Query: 56 IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
I +QFIP EL P + D + + SP+ G+VHRY D++LL CPVYCRFC R
Sbjct: 77 IRKQFIPVGSELLPSHPLLKMDSLHERKSSPVDGLVHRYKDKVLLLATDRCPVYCRFCTR 136
Query: 115 REMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
VG +VL K + LAY++ I +V+ +GGD L RL +
Sbjct: 137 SYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIADVVVSGGDCFRLKPSRLLAIGMG 196
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPE--LIQCL-------KEAGKPVYIAIHANHPYEF 219
L I ++ +RF ++ V P +I + L ++ G + H NHP E
Sbjct: 197 LLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNISDAGRDQGVEISFHTHFNHPREI 256
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
++ IAA L GI + +QSVL+ G+NDDPE++ L++ +L I+PYY++ DL G
Sbjct: 257 TDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQLVKKLSDLHIQPYYVYTCDLVDG 316
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCI 337
H R ++ +I +++ +G P +++D PGG GK + + H + G Y
Sbjct: 317 IEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGGGGKRDVHSFEHYNTQTGLAVYRA 376
Query: 338 TDHH-NIVHDYPPK 350
+ + YP
Sbjct: 377 LSVRPDQLFTYPDP 390
>gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
DSM 14365]
Length = 473
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 22/354 (6%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
Q ++ ++T L A ++ + D++ + ++P + +LI+ +P DP
Sbjct: 57 WQAKN-SITKPAKLLAALQEIVPQSFYDDVAAGFRKSPMSVRVSPYLLSLIDWDHPYEDP 115
Query: 56 IARQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ QFIP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R
Sbjct: 116 LRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRYVDKALFLTLDTCPVYCRFCTR 175
Query: 115 REMVGSQKG------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
VG + A Y+ + ++ +++ +GGD L ++++ + +T
Sbjct: 176 SYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDIVISGGDSYQLKARQIRHIGET 235
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
L + +++ +RF ++ P V PQ++ + E + L ++ K V + H NHP E
Sbjct: 236 LLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVELGRKLHKEVALHTHFNHPNEI 295
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ A+ L GI + +QSVL +G+ND E + L++ L ++PYY++ D+ G
Sbjct: 296 TAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLVKRLSYLNVQPYYVYMHDMVKG 355
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
R TI+ G I ++ +G P +++D PGG GK I ++ G
Sbjct: 356 VEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGGKRAIHSYEYYDRDAG 409
>gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
TB-2]
Length = 414
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 94/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQ 59
M+ + ++ S + L + KE I+ IK +S + + IA+L++ N +DPI R
Sbjct: 1 MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60
Query: 60 FIPQKEEL------------------------NILPEEREDPIGDNNHSPLKGIVHRYPD 95
P K+ L N P + + I + N L+G H+Y +
Sbjct: 61 IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120
Query: 96 RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
IL C YC FCFR +SK+ E + YI+ I +V+FTGGD
Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180
Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELIQCLK---EA 203
PL++S K L+ +K L I H++ +R ++ P R EL+ K ++
Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ + G I+ +QS LL+ IND ++ + + V
Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
L + PYY+ +F L + + +I +SGL + + GK+ +
Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLARTVRGPSMSAKPGKIAV 360
Query: 323 DTHNIKKVGNGSYCITD 339
+ ++ N + +
Sbjct: 361 V--GVSEINNEKVFVLN 375
>gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
Length = 346
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 3/323 (0%)
Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q K L +L + + + ++ + + + A + +P+DP+ Q
Sbjct: 25 WQNAMKAALRDPAELCRLLQLPEACSEAAIAAASDFPLFVPREFAAKMTLGDPHDPLLVQ 84
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P EL+ DP+GD+ G++ +Y R LL C V+CR+CFRR
Sbjct: 85 VLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCRYCFRRHFPY 144
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
++ + ++ A+A + I EV+ +GGDPL L+ L ++ + L I H++ +R
Sbjct: 145 AEVPSGVA--AWSDAIAALAADPSIQEVLLSGGDPLTLADATLAQLAQQLAAIPHLRRIR 202
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PI+ PQRIN +L+ L + IHANHP E +AAI RL AG+++L+
Sbjct: 203 VHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDRLNQAGVMVLN 262
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL G+NDD ++LA L ++ R+ PYYLH D G +HF + E G ++ L+
Sbjct: 263 QAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRERGVDLIRQLRA 322
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
++ G P Y+ ++ G K I
Sbjct: 323 RLPGYAVPRYVEEIAGQPNKTII 345
>gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C R+ VG T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTRKRRVGD-NDTIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
Length = 461
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 25/371 (6%)
Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
Q + K++T L + ++ + I + E + ++P + +LI+ ++P DP
Sbjct: 59 WQAK-KSITRPDKLLDTLRGMVSDDFIRDATEGFARAPMSVRVSPYMLSLIDWNDPYGDP 117
Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ QFIP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R
Sbjct: 118 LRTQFIPLASRFLPDHPKLGLDSLHERADAPVPGLTHRYADKALFLPLDTCPVYCRFCTR 177
Query: 115 REMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
VG V + + A AYI + ++ +++ +GGD L ++L + +T
Sbjct: 178 SYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELEDIVVSGGDAYNLRPEQLGAIGET 237
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
L + ++Q +R ++ P V PQ+I + E I + ++ K V I H NHP E
Sbjct: 238 LLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRTVELGRKLHKEVVIHTHFNHPNEI 297
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ A+++L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G
Sbjct: 298 TGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKLLVKRLGHVHVHPYYVYIHDLVRG 357
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
R T+ G I ++ +G P +++D PGG GK + G
Sbjct: 358 VEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGGGGKRDAHSFEHYDRTTGISVFEA 417
Query: 340 HH---NIVHDY 347
+ Y
Sbjct: 418 PSVKPGQRYTY 428
>gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980]
gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 531
Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 28/358 (7%)
Query: 18 NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72
+I +E I+++KE +++ P I ++I+ NP +DPI RQFIP K +L P+
Sbjct: 159 GIITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPK 218
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------L 126
D + +++ SP++G VHRY D+ L CP+YCRFC R +G V
Sbjct: 219 VELDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKP 278
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K E YI++ Q+ +++ +GGD IL+ + ++ + + L I H++ RF ++
Sbjct: 279 QRKRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLA 338
Query: 187 VDPQRINPE----------LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
V P RI + L K+AGK + I H NHP E + + A+ RL +
Sbjct: 339 VSPARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVT 398
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +Q+VLLKG+NDD ++NL++T + I PYY++ D+ R + ++
Sbjct: 399 VRNQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERH 458
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
++ I G P +++DLPGG GK ++ G ++ + N V++Y
Sbjct: 459 IRGSIGGFVTPNFVVDLPGGGGKRLAASYDSYDPITGRSTFTAPAVTGKNKENRVYEY 516
>gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 443
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 102/335 (30%), Positives = 170/335 (50%), Gaps = 22/335 (6%)
Query: 35 YSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHR 92
+I LTP + +L++ P +DPI +QF+P + + D + + + SP+ G+VHR
Sbjct: 30 MAIRLTPHVLSLVDWTKPLDDPIRKQFLPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHR 89
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146
YP R L +CPVYCRFC R VG+ TV S K E +I++ + +
Sbjct: 90 YPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQD 149
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL--- 200
++ +GGD L +++++ L I H++ +R S+ V P RI + L
Sbjct: 150 IVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIEV 209
Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L +
Sbjct: 210 SNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLD 269
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPGG
Sbjct: 270 LIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPGG 329
Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNI----VHDY 347
GK + T + G +Y + V+ Y
Sbjct: 330 GGKRLVSTMESYQNGEATYRAPGLPGVKGEMVYRY 364
>gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40]
Length = 453
Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 109/349 (31%), Positives = 169/349 (48%), Gaps = 23/349 (6%)
Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDP 77
E I ++ +A+ TP I +LIN +DPI RQFIP P+ + D
Sbjct: 91 AEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDS 150
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDT 131
+ + + SP+KG+VHRYPD++L VCPVYCRFC R VG Q TV K
Sbjct: 151 LHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYW 210
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
E YI ++ +V+ +GGD L +L+++ TL I H++ +RF S+ V P R
Sbjct: 211 EPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSR 270
Query: 192 I---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
I + E + L +E GK + + H NHP E S A +L + + + +Q+
Sbjct: 271 ILDPSDEWTRVLIEISNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQT 330
Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
VLL +N++ + L+R + I+PYY++ D+ G R + + I + ++ I
Sbjct: 331 VLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTI 390
Query: 302 SGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHNI-VHDY 347
+G P +++DLPGG GK T + G + VH Y
Sbjct: 391 AGFMTPSFVVDLPGGGGKRLASTFESYDTRTGVSRFLAPGVKGNTVHQY 439
>gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
Length = 526
Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 28/353 (7%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQF 60
QLR + + D +E + IK +I LTP + +L++ P +DPI +QF
Sbjct: 90 QLRR--IRTKDDFI------EEAVAAIK--LAPMAIRLTPHVLSLVDWTKPLDDPIRKQF 139
Query: 61 IPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P + + D + + + SP+ G+VHRYP R L +CPVYCRFC R VG
Sbjct: 140 LPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVG 199
Query: 120 SQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ TV S K E +I++ + +++ +GGD L +++++ L I
Sbjct: 200 ANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQDIVVSGGDAYFLQPDHVKEIVYRLLNIP 259
Query: 174 HVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEA 223
H++ +R S+ V P RI + L +E GK V + H NH E +
Sbjct: 260 HIRRIRLASKGLAVAPGRILDDADPWTDALIEVSNKGREMGKQVCLHTHINHANEITWIT 319
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A ++L G+I+ +QSVLLKG+N+ + L +L++T ++ I+PYY++ D+ G
Sbjct: 320 RLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLDLIKTLADINIQPYYVYQCDMVQGIEDL 379
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
R ++E + L+ K+SG P +++DLPGG GK + T K G +Y
Sbjct: 380 RTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPGGGGKRLVSTVESYKNGEATYR 432
>gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+]
gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+]
Length = 491
Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 25/342 (7%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88
+ +I +TP I + +N NP +DPI RQF+P K L P+ D + + SP+KG
Sbjct: 141 AAATMAIRMTPYILSRVNWENPRHDPIIRQFLPLKSVLIPDHPKLALDSLHEEADSPVKG 200
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
+VHRY D+ L VCP YC FC R VG+ TV + + E A AYI+
Sbjct: 201 LVHRYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTP 260
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199
+ +++ +GGD L +L+ + L + +++ RF S+ V P RI E +
Sbjct: 261 ALQDIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNA 320
Query: 200 LKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + H NHP E S + A +L G+++ +Q+VLL+G+NDD +
Sbjct: 321 LIDISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVD 380
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
++ L+R + ++ PYY++ D+ H R ++ + A ++ I+G P +++D
Sbjct: 381 TMSKLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVD 440
Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
LP G GK ++ K G +Y D N V++Y
Sbjct: 441 LPAGGGKRLACSYESYDPKTGLSTYMAPAVTGRDKENKVYEY 482
>gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
Length = 223
Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HRYPDR+LL + + CP+YCR C + VG K T+ + + YI+ Q+ +V+
Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTSKRCVGD-KDTIPNKSAILQGIDYIRNTPQVRDVLL 59
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++
Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178
Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223
>gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
Length = 519
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 14/355 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL+ + + L + ++ I ++ ++ HY + LTP A+LI P N NDP+ Q +
Sbjct: 155 QLK-FAIEDVETLSKIIDLPEKAITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSV 213
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ + E P +HSP + I YP + +K ++C +YC C R +G +
Sbjct: 214 PTGEMVDNVGVEI--PPVAADHSPARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-K 270
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + K AL YI+ I +V+ TGGD +L + ++ +L+ L I HV++ R
Sbjct: 271 KDRIYNKKAYLEALEYIKNNKNIRDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLG 330
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQR++ EL+ L+E+ KP+ + N E + + +++ +L+
Sbjct: 331 TRIPVTTPQRVDQELLDILEESNDKKPLRVVTQINTAQEITPISKEVFKQISKRVSAVLN 390
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297
Q+VLL+GIND + L T E ++PYY+ + +H R+ ++ GQ I+ +
Sbjct: 391 QAVLLRGINDSKVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-AHMRVPVQVGQDIIEGM 449
Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-VGNGSYCITD-HHNIVHDYPPK 350
ISG P Y + GK+ + N+ + +G+ + + YP
Sbjct: 450 YGNISGDAIPRY---IATAGGKIPLHRTNVVEFAEDGNIILRKPWSGEIVKYPDA 501
>gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
NOR5-3]
Length = 345
Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 4/326 (1%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QL++ + + DL A I E + + + + A I N DP+ RQ +
Sbjct: 19 QLQN-AIRTPTDLAAAVGIALEDLPYSLAADRGFPLLVPRAFAARIERGNVADPLLRQIL 77
Query: 62 PQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
++E I+ +DP+ + + ++ G++ +Y R LL + C + CR+CFRR+ +
Sbjct: 78 AAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLVVTGQCAINCRYCFRRDYPYA 137
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
SS + A + + + I E+I +GGDPL+L +++ + + + + LR
Sbjct: 138 DNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDEQIAAMARRIARHQRSVTLRI 195
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+R+P+V P+R+ LIQ L E G P + +H+NHP E AI L AG +L+Q
Sbjct: 196 HTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEIDAPTAHAIKSLREAGTTVLNQ 255
Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
SVLL G+ND PE+LA+L PYY+H D AG +HF ++ + ++I+ L
Sbjct: 256 SVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGAAHFEVSEDSARRIMGELSGM 315
Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHN 326
G P +++ PG K +++
Sbjct: 316 RPGYLVPRLVIERPGAGSKQQLEPIY 341
>gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
Length = 305
Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats.
Identities = 100/291 (34%), Positives = 155/291 (53%), Gaps = 3/291 (1%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + LTP +A+ + DPI RQF P EEL P DP+ + SP+ G+VH+
Sbjct: 16 RGFPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHK 75
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R LL L CPV+CR+CFRR + + + + + ++ + + E+I +GG
Sbjct: 76 YQGRALLHLTDACPVHCRYCFRRH---GAITSPMDPQAEQQLVDHLAQDHTLQEIILSGG 132
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL+L+ + + L + H+Q +R HSRVP+ DP R+ +++ L+ K V + IH
Sbjct: 133 DPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVIH 192
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
NH E + + A+ AG ++L+QSVLL G+ND EILA L V L + PYYLH
Sbjct: 193 CNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYLH 252
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
D G +HF ++ + +I+ L + + G P + + P GK I
Sbjct: 253 LLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPIH 303
>gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii
37]
gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37]
Length = 337
Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q L + T+ + Q L I E + + +S+ + + + NDP+ +
Sbjct: 16 WQKELAN-TVKNPQQLLQLLDISPENVPLSLKARKSFSMLVPMPFVKKMKKGDINDPLLQ 74
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q +P ++E + DP+ ++N S L G++H+Y R+LL L C + CR+CFRR
Sbjct: 75 QVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYCFRRHFP 133
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ ++ K + + YI+ ++ EVI +GGDPL+ LQ V+ L + ++ L
Sbjct: 134 Y--QDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELLPQLRRL 191
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
R HSR+P+V P RI +L ++ V +H NH E + A+++L AG+ LL
Sbjct: 192 RLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQAGVQLL 251
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+QSVLLKGIND+ + L +L E I PYYL D G HF L + ++ +
Sbjct: 252 NQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQLTQEMS 311
Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
+ G P ++ G K I
Sbjct: 312 AALPGYLVPRLSREIAGEKNKTLI 335
>gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
Length = 326
Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS DL + + + + + E + + A + NP DP+ Q
Sbjct: 8 WQKILAQGFTSTADLLDFLELPRSEGNLFAE--KQFPSRIPLGFAERMQKGNPKDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++EL + + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 66 VLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AYI I EVI +GGDPL+ ++ L+++L++L I HV LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHVHTLR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKATCYLLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL G+NDD IL+ L + I PYYLH D G++HF + + Q I L+
Sbjct: 243 QSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + PG K +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325
>gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 315
Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats.
Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)
Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
+I+ K+ + I + A LI+ N NDP+ RQ I K L+ P+ + +
Sbjct: 25 KIEAFKD--QDFPIKIPLEFAQLIDKSNKNDPLLRQVISSKV-LSKSENFSLLPLEEEKY 81
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ G++H+YP+R+LL VC ++C++CFR+ S+ + + + + YI +
Sbjct: 82 SPVAGLIHKYPNRVLLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQ---NYIVNDVK 138
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EVI +GGD L LS +L ++ + I H++ LR H+R +V P RI +L L ++
Sbjct: 139 INEVILSGGDLLSLSDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQS 198
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
V I +H NH E S + I++L +G+ LL+QSVLLKG+ND +IL L +
Sbjct: 199 RLNVVIVLHTNHAQELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFD 256
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
L I PYYLH D G F + ++ ++ LK +SG P + D G + K +
Sbjct: 257 LGILPYYLHMLDKVQGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRDN-GNHSKDWL 314
>gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 384
Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats.
Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 18/346 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
M +H T TS N+ + ++ ++ + +Y+ +LIN +P DPI R
Sbjct: 1 MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P +E DP + ++ + G+ H+Y D +L C CRFCFR+ +
Sbjct: 58 VPHPDETKD--WGELDPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+G DT ALAYI+ +I V+ +GGDPL+L L+ +LK L ++H+Q +R
Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173
Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
SR+P+ DP I N L++ L +P +Y+ H NHP E S A+ A+ L AGI
Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
I+ +Q+ LL+G+ND PE L+ L + PYYL G HF + IEEG I+
Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
++ +SG + + GK+++ V + H
Sbjct: 294 KAQKTLSGPAKRVR-YAMSHATGKIEV-----VSVTHDQVVFRRHR 333
>gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b]
Length = 326
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS DL + + + + + E + + A + NP DP+ Q
Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++EL + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 66 VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLQACSDLKKAACYLLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + PG K +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325
>gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15]
Length = 454
Score = 330 bits (848), Expect = 2e-88, Method: Composition-based stats.
Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LIN PNDPI +
Sbjct: 20 RFKVYTDRQLDKIEVIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79
Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
PQK +ELN P + E + + + L
Sbjct: 80 VFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELNPHPAGQMEMNMPELDGEVL 139
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R +
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L L +AGK V I H NH E + E A AI R+ G + +Q L+K +NDD +
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L + V+L I PYY+ ++F + + E I +K+SGL + +
Sbjct: 320 WAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIYREAMKKVSGLARTARGPSM 379
Query: 314 PGGYGKVKID 323
G GKV+I
Sbjct: 380 SAGPGKVEIQ 389
>gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
Length = 326
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS DL + + + + + E + + A + NP DP+ Q
Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++EL + DP+ + N++ +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 66 VLAKEDELTEADDYVIDPLSE-NNTLIKGLLHKYRGRVLLTLTGVCAVNCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLRACSDLKKAACYLLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL+ L + I PYYLH D G++HF + + + I L+
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRARSIYHQLQS 302
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + PG K +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325
>gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
Length = 326
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS DL + + + + + E + + A + NP DP+ Q
Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++EL + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 66 VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL+ L T + I PYYLH D G++HF + + Q I L+
Sbjct: 243 QSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + PG K +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325
>gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 455
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 95/364 (26%), Positives = 153/364 (42%), Gaps = 49/364 (13%)
Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEE 66
S + + + + Q E+K +++ + + N LI+ N P DPI + PQK
Sbjct: 27 RSLEKIPQLAKLSEAQRFEMKVVASVLPFRVNEYVINELIDWSNIPADPIFQLTFPQKGM 86
Query: 67 LNILPEEREDPIG----DNNH-----------------------------SPLKGIVHRY 93
L ER + D H ++G+ H+Y
Sbjct: 87 LAPESYERMAELHRRGADKAHISALAKELRDGLNPHPAGQLEMNLPRVNGEVVEGLQHKY 146
Query: 94 PDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ +L C YC FCFR K ++S + L Y++E Q+ +++ TG
Sbjct: 147 RETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLREHPQVTDLLVTG 206
Query: 152 GDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE--------LIQCL 200
GDP+++ K L + L+ L + HVQ +R ++ P R + L+ L
Sbjct: 207 GDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDNDADELLDLLTRL 266
Query: 201 KEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
++G+ V I H NH E + A AI RL G+ + SQ LL INDDP + A L +
Sbjct: 267 VKSGRQVAIMAHYNHWRELETPIAREAIRRLRETGVEIRSQGPLLAHINDDPAVWARLWK 326
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
T V+L I PYY+ +F + + I +++SGL + + G GK
Sbjct: 327 TQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGRTARGPSMSAGPGK 386
Query: 320 VKID 323
V+I
Sbjct: 387 VEIQ 390
>gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 326
Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats.
Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 6/323 (1%)
Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS DL + + + + + E + + A + NP DP+ Q
Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ +++EL+ + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR
Sbjct: 66 VLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + + AYI S I EVI +GGDPL+ ++ L+++L++L I H+ LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLLRAQSIYHQLQS 302
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + PG K +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325
>gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968]
gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150]
gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968]
gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150]
Length = 327
Score = 328 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 5/323 (1%)
Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + TS +L + + + + + A + NP+DP+ Q
Sbjct: 8 WQKKLAQGFTSVTELLTYLELPLSTGN--LDAEKQFPSRIPLGFAKRMQKGNPHDPLLLQ 65
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+ EL E DP+ +++++ ++G++H+Y R+LL + VC V CR+CFRR
Sbjct: 66 VLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCRYCFRRHFPY 125
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + YI + + I EVI +GGDPL+ S L ++++ L I H+ LR
Sbjct: 126 --QANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLEQIPHLHTLR 183
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+P+V P+RI+ L+ LK+ I +H NH E + + L LL+
Sbjct: 184 IHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHELRRIDCHLLN 243
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q+VLL GIND+ +LA+L +T + PYYLH D G +HF L + I L+
Sbjct: 244 QTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTVKGIYQQLQN 303
Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
+ G P + + PG K +
Sbjct: 304 LLPGYMLPRLVREEPGKSSKTLL 326
>gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 326
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 6/318 (1%)
Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ T + L + + EI + + + L +A I + +DPI +QF+P
Sbjct: 14 RQNFTQWKKLADFLELDPSIQQEIFK-RPSFPLNLPKRLAEKIKKNTLDDPILKQFLPTL 72
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E L DP+GD + ++H+Y R L+ C + CRFCFR+ +
Sbjct: 73 AEQKQLAGFTLDPVGDTQFTKAPKLLHKYNGRALIVCTSACVMNCRFCFRQNFDYEVQEK 132
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ L I + E+I +GGDPL LS L +L L +IKHV+ +RFH+R
Sbjct: 133 GFQKE-----LELIAADETLQEIILSGGDPLSLSDTVLVHLLDALSHIKHVKRVRFHTRF 187
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
PI P+RI+ + + + +H NHP E + + L G+ILL+QSVLL
Sbjct: 188 PIGIPERIDDAFLNLFENRPFITWFVLHTNHPNELDDHIFHHLHLLQRKGVILLTQSVLL 247
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KG+ND P++L L V I PYYLH D G +HF ++ E G++++ + + + G
Sbjct: 248 KGVNDCPKVLCELFNQLVNRGIIPYYLHQLDRVQGGAHFEVSEERGKELIQEIAKSLPGY 307
Query: 305 CQPFYILDLPGGYGKVKI 322
P Y+ ++ G K +
Sbjct: 308 AVPKYVREIAGEPNKTPL 325
>gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
Length = 361
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 101/336 (30%), Positives = 171/336 (50%), Gaps = 10/336 (2%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ + E+ ++ ++ Y + +LI+ +P+DPI R IP + EL
Sbjct: 7 DIREIEQLAAEERQRLRPVTETYVFRVNDYYLSLIDWDDPDDPIRRIVIPSEVEL--AEY 64
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
DP + ++ G H+Y LL + VC YCRFCFR+ + S D E
Sbjct: 65 GSLDPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVE 124
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
L YI +I V+ TGGDPL+LS +RL ++L LR I HV+++R +++P +P R+
Sbjct: 125 PGLRYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRV 184
Query: 193 NP--ELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
EL++ L+ + ++ ++H NHP E +EEA+ I L G+ L++Q+ LL+ +
Sbjct: 185 TDNPELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRV 244
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
NDDP +LA L+ I PYY+ AG + F + + EG +IV K ++SG +
Sbjct: 245 NDDPAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAKR 304
Query: 308 -FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
Y+ + GK++I +++ + + +
Sbjct: 305 VRYV--MSHATGKIEILAVEGERIYLKYHQARNPED 338
>gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
Length = 304
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 112/292 (38%), Positives = 170/292 (58%), Gaps = 8/292 (2%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
I QF K EL + +DP+G+ HS KG++HRY DR++L + + C YCRFCFR+
Sbjct: 18 IKSQFCFSKGELFLNG--NKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
S +G L E ++ Y+++ + EV+ +GGDP LS+K+L ++L +R IKH+
Sbjct: 76 NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
+R SRV P RI+ + + LK KP++IA H NHP E ++E + L ++GI
Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
++SQ+VLLK IND+ L L + V++ IKPYYL D A G FR++I++ ++
Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249
Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ KISGLC P + DLP GYGKV ++ + I K + + +Y
Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGNIFTFKNFEGKEINY 301
>gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
Length = 454
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LIN PNDPI +
Sbjct: 20 RFKVFTDRQLDKIEAIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79
Query: 60 FIPQKEEL--------------------------------NILP-EEREDPIGDNNHSPL 86
PQK L N P + E + + + L
Sbjct: 80 VFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALNPHPAGQMEMNMPELDGEVL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S D E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLKMASTDAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINP-------- 194
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
EL L + GK V I H NH E + + A AI R+ G + +Q L+K +NDD +
Sbjct: 260 ELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L + V+L I PYY+ ++F + + E I +++SGL + +
Sbjct: 320 WAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIYREAMKQVSGLARTARGPSM 379
Query: 314 PGGYGKVKID 323
G GKV+I
Sbjct: 380 SAGPGKVEIQ 389
>gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae]
Length = 464
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 113/387 (29%), Positives = 179/387 (46%), Gaps = 41/387 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN----------------LIKKEQIDEIKEISNHYSIAL--TPV 42
Q+++ +L S + L N + + E I ++ +A+ TP
Sbjct: 65 WQMKN-SLQSPKALLNFLAAVLPSEIRSSSTQGYVTRAEFIADVATGMKKAPMAVRLTPH 123
Query: 43 IANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRI-LL 99
I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRYPD+
Sbjct: 124 ILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKNDSY 183
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGD 153
VCPVYCRFC R VG Q TV K E YI ++ +V+ +GGD
Sbjct: 184 LATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGD 243
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-------KEA 203
L +L+++ TL I H++ +RF S+ V P RI + E + L +E
Sbjct: 244 TFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEISNRGREK 303
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
GK + + H NHP E S A +L + + + +Q+VLL +N++ + L+R +
Sbjct: 304 GKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLAD 363
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG GK
Sbjct: 364 NNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGKRLAS 423
Query: 324 TH--NIKKVGNGSYCITDHHNI-VHDY 347
T + G + VH Y
Sbjct: 424 TFESYDTRTGVSRFLAPGVKGNTVHQY 450
>gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
Ellin428]
Length = 456
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 100/370 (27%), Positives = 169/370 (45%), Gaps = 25/370 (6%)
Query: 2 QLRHKTLTSAQDLYN-ANLIKKEQI-DEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56
Q RH T+T+ + L + E ++++ +H + ++P + LI+ +P +DPI
Sbjct: 56 QNRH-TVTNPRQLKETLGALAPEGFYEDLQAALDHAPMALRISPYLLGLIDWRDPLHDPI 114
Query: 57 ARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
QF+P + + P + D + + SP+ G+ HRYPD+ L CPVYCRFC R
Sbjct: 115 RTQFLPLRSQQQPDHPLLQLDSLHEQEDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRS 174
Query: 116 EMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
VG+ V S E A AYI + + +++ +GGD L LQ + + L
Sbjct: 175 YAVGNDTPEVEKLALTTSLARWEQAFAYIASQPDLEDIVISGGDSYNLKADHLQLIGERL 234
Query: 170 RYIKHVQILRFHSRVPIVDPQRI------NPELIQCL---KEAGKPVYIAIHANHPYEFS 220
+ +++ +R+ ++ V PQ+I L + + K V + H NHP E +
Sbjct: 235 LKMPNIRRIRYATKGLCVMPQKILSDHAWTDALTRVAELGRSLHKDVVVHTHFNHPAEIT 294
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
A++ L GI + Q+VL + +NDDP + L+R + + PYY++ D+ G
Sbjct: 295 SITQDAMNVLVERGIHVRCQTVLQRTVNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGV 354
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
R + QK+ ++ +G P ++LD PGG GK + + G T
Sbjct: 355 EDLRTPLATAQKLEKYVRGATAGFNTPAFVLDAPGGGGKRDVHSPERYDRATGISVFTSP 414
Query: 341 H---NIVHDY 347
Y
Sbjct: 415 SVKPGKQFLY 424
>gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
Length = 441
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 87/368 (23%), Positives = 155/368 (42%), Gaps = 48/368 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
R TL++ +++ +EQ ++I + + + + + LIN N PNDP+ R
Sbjct: 14 FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73
Query: 61 IPQKEEL--------------------------------NILPEERED-PIGDNNHSPLK 87
P K+ L N P + D + + N L+
Sbjct: 74 FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C +C FCFR K +S++ E ++Y+QE ++
Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193
Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP+ +S L++ ++ + I+ ++ +R ++ PQR +
Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + K + I H NHP E + + AI + G + +QS L+ INDDP I
Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ R V L PYY+ +F I + +I + +SGL + +
Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373
Query: 315 GGYGKVKI 322
GK+ +
Sbjct: 374 TDPGKINV 381
>gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
ATCC 35110]
Length = 465
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 48/366 (13%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQ 63
TL + +++ + ++ + I + + + + + LI+ N PNDPI PQ
Sbjct: 27 YTLKNFRNIQQLKHLPEDVVSAIAVVGHVFPFKVNSYVTEKLIDWGNAPNDPIFTLTFPQ 86
Query: 64 K--------------------------------EELNILP-EEREDPIGDNNHSPLKGIV 90
K EELN P + E + N + G+
Sbjct: 87 KGMLLPHHYEIVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQ 146
Query: 91 HRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
H+Y + L C YC +CFR G +++ E +AY++ ++I +V+
Sbjct: 147 HKYNETALFFPSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVL 206
Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE--------LIQ 198
TGGDPL +S K L K + L + H++ +R ++ P R E +
Sbjct: 207 ITGGDPLTMSAKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFR 266
Query: 199 CLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ +GK + + H NHP E + E AI R+ G ++ +QS +++GINDD +I + L
Sbjct: 267 MIVRSGKHLALMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSAL 326
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ V L + PYY+ P FR+++ +I + +SG+C+ +
Sbjct: 327 WKRQVSLGLVPYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNP 386
Query: 318 GKVKID 323
GKV++
Sbjct: 387 GKVQVM 392
>gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
Length = 345
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 9/322 (2%)
Query: 34 HYSIALTPVIANLINPHNP--NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
++P LI P + + RQ + E + EER DP+G+ + +VH
Sbjct: 25 RLPEHVSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVH 84
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP+R+LL C YCR+CFRRE G LS +Y++ ++ E++ +G
Sbjct: 85 QYPNRVLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSG 143
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDP+ ++ +L+ LR + ++R +R P+ P+ I L + +P+++
Sbjct: 144 GDPMSGGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFI-MLLRSVRPLWVIA 202
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
H NHP E + A++R ++GI + +Q+VLL+G+ND+P +LA L V + +KP YL
Sbjct: 203 HINHPAELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYL 262
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HN 326
DLA GT+HFR+ +E+ I L+ ++SGL P + +DLP G GK +
Sbjct: 263 FQTDLARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDI 322
Query: 327 IKKVGNGSYCITDHHNIVHDYP 348
I + +G + ++ YP
Sbjct: 323 ISPLQDGRFSARGIDGKIYTYP 344
>gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
Length = 456
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 49/390 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQ 59
+ + T + + + + +++ ++ ++N + + N LI+ P+DPI +
Sbjct: 20 RFQVFTARNMDKIPGLDRMPEDERFAMRVVANVLPFRVNEYVINELIDWEKAPDDPIYQL 79
Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
IPQ+ ELN P + + + ++ L
Sbjct: 80 TIPQRGMLAPALFDRMADVLRRDASREEINRVAWEIRNELNPHPAGQMKLNVPQHDGEKL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L VC YC FCFR K +S + E AY+++ ++
Sbjct: 140 EGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHREV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ ++L++ L L ++HVQ +R ++ P R +
Sbjct: 200 SDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDLL 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + L +G+ V + H NHP E + A AI R+ + G+ + +Q LL IND E
Sbjct: 260 RLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSEA 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L R V L I PYY+ +F + + +I +++SGL + +
Sbjct: 320 WAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G GKV++ + G + +
Sbjct: 380 SAGPGKVEVQG-ITEVQGEKVFVLRFIQGR 408
>gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893]
gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893]
Length = 454
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + +E + E+K +++ + + N LI+ + PNDP+ +
Sbjct: 20 RFKVYTDRQLDKIDVIQNLPEETLFEMKVVASVLPFRVNEYVINELIDWNKVPNDPLYQL 79
Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
PQK +ELN P + E + + N L
Sbjct: 80 VFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELNPHPAGQMEMNMPELNGEVL 139
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+++ TGGDP+++ K L + L+ L H+Q +R ++ P R +
Sbjct: 200 SDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L L +AGK V I H NH E + + A AI RL G + +Q L+K +ND+ +
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATGAEIRAQGPLIKHVNDNADD 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L V+L I PYY+ ++F + + E I +++SGL + +
Sbjct: 320 WAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIYREAIKQVSGLARTARGPSM 379
Query: 314 PGGYGKVKID 323
G GKV++
Sbjct: 380 SAGPGKVEVQ 389
>gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 454
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 47/369 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + ++ ++ ++ + + + LI+ P+DPI R
Sbjct: 16 RFRAYTTKHLDELTTRAGLAADERLAVQAVATVLPFRVNSYVVDELIDWDAAPDDPIYRL 75
Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGD-NNHSP 85
PQ + L N P + D + N P
Sbjct: 76 VFPQADMLPQDDVSRIADLLRSGAQRKELNEAANQIRARLNPHPAGQMDLNVPKLANEEP 135
Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ H+Y + +L C YC +CFR +S + + + Y++ +
Sbjct: 136 IPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVRSHPE 195
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPE 195
+ V+FTGGDP+I+ + K ++ L I+H++ +R ++ PQR
Sbjct: 196 VTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDADDTLR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + +GK + H +HP E E A A+ R+ G ++ +Q+ L++ INDD +
Sbjct: 256 LFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDDSAVW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
++ RT + + PYY+ +F + + E +I + +SGL + +
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRGPSMS 375
Query: 315 GGYGKVKID 323
GKV +D
Sbjct: 376 ATPGKVCVD 384
>gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4]
gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4]
Length = 446
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 49/390 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E+ E++ ++ + + N LI+ N P+DPI +
Sbjct: 22 RFKVFTARQLDQIPQLQKLSAERRFEMEVVARVLPFRVNEYVINELIDWGNVPDDPIFQL 81
Query: 60 FIPQKE--------------------------------ELNILP-EEREDPIGDNNHSPL 86
IPQ++ ELN P + ED I N +
Sbjct: 82 TIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELNPHPAGQMEDNIPTLNGERV 141
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L VC YC FCFR K +++K+T AY++ ++
Sbjct: 142 EGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELKIAAKETHQLQAYLRAHPEV 201
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-------- 194
+V+ TGGDPL++ + L+ L+ L HV+ +R ++ PQR
Sbjct: 202 TDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTKSLTFWPQRFVTDDDADDLL 261
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + ++ AGK + + H NH E A AI R+ G + SQ LL INDD I
Sbjct: 262 ALFEEIQGAGKHLALMAHYNHWQELEPAIAREAIRRVRATGAQIRSQGPLLAHINDDANI 321
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L RT V L I PYY+ ++F + + + +I +K+SG+ + +
Sbjct: 322 WARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQIYRDAIQKVSGIGRTARGPSM 381
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV+I + G + +
Sbjct: 382 SAHPGKVEIQGV-TEIQGEKAIVLRMIQGR 410
>gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
Length = 433
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 48/381 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQF 60
+ T + Q L + I EQ+ IK ++ Y + +A NLI+ N P+DP+ R
Sbjct: 4 FQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFRLS 63
Query: 61 IPQKEEL--------------------------NILPEEREDPIGDN-------NHSPLK 87
PQ L I + +P G + PL
Sbjct: 64 FPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEPLH 123
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L L VC YC +CFR + +++ + + Y++ ++
Sbjct: 124 GMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPEVK 183
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200
+VIFTGGDP+++S + ++K ++ L + ++ +R ++ P R +LI+
Sbjct: 184 DVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIRFF 243
Query: 201 KE---AGKPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+E +GK + I H +HP E EA+ A+ R+ + G ++ SQS +++ +NDD E+
Sbjct: 244 EEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVWEE 303
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ + V+L + PYY+ +F + + E I ++SGL + +
Sbjct: 304 MWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGLGRTVRGPSMSCS 363
Query: 317 YGKVKIDTHNIKKVGNGSYCI 337
GKV + ++ ++ + +
Sbjct: 364 PGKVIV--EDVTEINDEKLFV 382
>gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 521
Score = 322 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 11/353 (3%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
QLR + S + L + + ++E+ ++ Y + LTP A LI P + +DP+ Q +
Sbjct: 158 QLR-YAIESPRTLESILNLPAGALEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSV 216
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P E ++ E P +HSP + I YP + +K ++C +YC C R +G +
Sbjct: 217 PTGEMVDNAGVEM--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-K 273
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K + + AL YI+ +I +V+ TGGD +L K L+ +L L ++HV+I R
Sbjct: 274 KDRIYPEQAYSEALDYIRRDRRIRDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLG 333
Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R+P+ PQR++ EL+ L+E+ KPV + N E + + A R++ A +L+
Sbjct: 334 TRIPVTTPQRVDQELLDILEESNDKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLN 393
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK 298
Q+VLLKGIND +A+L T E ++PYY+ + SH R+ +E+G+ IV +
Sbjct: 394 QAVLLKGINDSFVKMAHLCETIQEAYVRPYYIFNCSYRNPQFSHLRVPVEKGRDIVEGMY 453
Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350
ISG P Y + GK+ + N+ G + YP
Sbjct: 454 GNISGDAIPRY---IATAGGKIPLHRSNVLDREQGDIILQKPWSGEQVRYPDA 503
>gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length = 434
Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats.
Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 46/368 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+ R T + L I +EQI +K ++ Y + + NLI+ N P DPI R
Sbjct: 3 KYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFRL 62
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDN-------NHSPL 86
PQ+E LN +R +P G ++ L
Sbjct: 63 SFPQEEMLNPEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDNEVL 122
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
GI H+Y + +L VC YC +CFR + ++ D L Y++E ++
Sbjct: 123 HGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEHPEV 182
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
++IFTGGDP+++S ++K ++ L I V+ +R ++ P R E
Sbjct: 183 KDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEILSF 242
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +GK + I H +HP E + +A+ AI+R+ + G ++ SQS +++ +NDD +I
Sbjct: 243 FEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDADIWE 302
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ + ++L I PYY+ +F + + E +I + +++SGL + +
Sbjct: 303 AMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGLGRTVRGPSMSC 362
Query: 316 GYGKVKID 323
GK+ +
Sbjct: 363 APGKIIVQ 370
>gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
Length = 453
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 78/368 (21%), Positives = 152/368 (41%), Gaps = 46/368 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L +E+ I+ ++ + + + LI+ P+DPI R
Sbjct: 16 RFRAYTSKHLDELTARAGFGEEERLAIRAVATVLPFRVNSYVIDELIDWDAAPDDPIYRL 75
Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
PQ + L N P + + + P+
Sbjct: 76 TFPQADMLPEADVARIADLLRKDAPRQEINRVASEVRARLNPHPAGQLQLNLPKMDDEPM 135
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+YP+ +L C YC +CFR + ++S + + +AY+++ ++
Sbjct: 136 PGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLRQHPEV 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPEL 196
V+ TGGDP+I+ L++ ++ L ++ ++ +R ++ PQR L
Sbjct: 196 TGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDADDTLRL 255
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +GK + H +HP E + A+ R+ + G ++ +Q+ L++ IND E A
Sbjct: 256 FEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDSSETWA 315
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ RT V L + PYY+ +F + + + +I +SGL + +
Sbjct: 316 TMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRGPSMSA 375
Query: 316 GYGKVKID 323
GKV +D
Sbjct: 376 TPGKVCVD 383
>gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
Length = 348
Score = 321 bits (824), Expect = 1e-85, Method: Composition-based stats.
Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 2/290 (0%)
Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
+ + T + +P+DP+ Q +P E + DP+ + +++ KGI+ +
Sbjct: 59 AQFPVRATRDYVRRMKKGDPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQK 118
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R LL C ++CR+CFRR S+ S + ALA + + E+I +GG
Sbjct: 119 YHGRALLITTSACAIHCRYCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGG 176
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL+L++ L ++L + + + +R H+R+PI+ P RI+ L+ L + IH
Sbjct: 177 DPLMLNNPVLDELLTLIAELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIH 236
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
ANH E A++RL ++L+Q+VLLKG+NDD LA L E + PYYLH
Sbjct: 237 ANHGAELDASVEKALARLRPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLH 296
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
D G +HF E ++ +L+ K+ G P + ++PG K I
Sbjct: 297 QLDKVQGAAHFDCGDERLSSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346
>gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
Length = 438
Score = 320 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 83/388 (21%), Positives = 158/388 (40%), Gaps = 50/388 (12%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
M+ R T+ + + + + ++Q +I+ + + + + + LIN +P NDPI
Sbjct: 1 MRYRSYTVKNFRTIPQVEKYLTEKQKFDIEVVGQVFPFKVNNYVIDQLINWEDPLNDPIF 60
Query: 58 RQFIPQKE--------------------------------ELNILPEEREDPIGDNNHSP 85
R PQK+ ELN P ++ + + +
Sbjct: 61 RLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELNPHPAGQKYNVPEVDGIK 120
Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G H+Y + IL C YC FCFR + K+ + + YI+ +
Sbjct: 121 LHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKFAMKEVDVLIEYIKRNPE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP------- 194
I +++FTGGDPLI+ L+ ++ + I H++ +R ++ P R
Sbjct: 181 ITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKSLGFWPYRFTEDEDAQEL 240
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+L + + + G + H NH E ++ A+ ++ G ++ +QS +L+ IND E
Sbjct: 241 LDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGAVIRTQSPVLRHINDSSE 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ A + + V + + PYY+ +F + + I +K SGL +
Sbjct: 301 VWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFRDAYKKTSGLARTVKGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDH 340
+ GKV+I + ++ + D
Sbjct: 361 MSATPGKVRIL--GVSEIFGEKVMVLDF 386
>gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
245]
Length = 323
Score = 320 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 7/310 (2%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
+L+H +T+ + L + + + I + +T A L++ NP+DP+ + I
Sbjct: 5 RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64
Query: 62 PQKEELNILPEEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
P EEL P++ I + + P++GI+HRYP ++LL C +CRFCFR E V
Sbjct: 65 PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKV- 123
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L + + A+ Y+++ I +VIFTGGDP+ + +RL+ L +R I HV+I+R
Sbjct: 124 ---ASTLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+R PI P+ ELI+ L KP+ + HP E S+E + + RL++AGI+LL
Sbjct: 181 ITTRAPIFAPEIFTDELIRMLSWF-KPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Q +LKGINDD + L L V+ R PYY ++ G HF L E +K++ L+
Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299
Query: 300 KISGLCQPFY 309
SG C P
Sbjct: 300 TTSGFCIPHL 309
>gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
Length = 463
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 48/391 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E + ++N + + N LIN N PNDPI +
Sbjct: 34 RFKVYTARQLDKIEPLKRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93
Query: 60 FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87
PQK LN P + E + + + +
Sbjct: 94 TFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNPHPAGQMEHNMPEVDGEKID 153
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L VC YC FCFR +++K+ YIQ +I
Sbjct: 154 GVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELI 197
+V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ +L
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAQDLLDLF 273
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +GK + + H NH E ++ A A+ R+ G ++ +Q LL IND+ + A
Sbjct: 274 EEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L +T VEL I PYY+ +F + + + +I +++SG+ + +
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDAMKQVSGIARTARGPSMSSH 393
Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346
GKV+I + ++ G + + HD
Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422
>gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
DSM 12168]
Length = 357
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 116/337 (34%), Positives = 181/337 (53%), Gaps = 29/337 (8%)
Query: 28 IKEISNHYSIA------LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
+K++ ++ L+P A + RQ++P EE N+LP E DP+G +
Sbjct: 29 LKKVLERLYVSGQRDGDLSPFYA-----------LRRQYVPSIEEKNVLPCELSDPLGAH 77
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ +VH+Y +R+LL C YCR CFR S+K ++ + A AY+
Sbjct: 78 RYQITPRLVHQYKNRVLLLTTARCFAYCRHCFR-RTYTSRKQGFITDAECGEACAYLSSH 136
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
++ E++F+GGDPL S+ L+++++ +R + ++R +R PI +P+R + ELI K
Sbjct: 137 PEVQEILFSGGDPLTASNDALRQLIRRVRRARPGILIRICTRAPIAEPERFDSELIALFK 196
Query: 202 EAGKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
E P+++ H NHP E S E+ A+S L +AGI + SQ+VLL+G+ND +LA L
Sbjct: 197 E-NAPLWVIPHVNHPAEISNRFSPESYRALSGLVSAGIPVQSQTVLLRGVNDSVPVLAQL 255
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ IKP YL DLA GTSH R+ I EG K+ L+ ++SGL P Y +DLPGG
Sbjct: 256 FHELTCMGIKPGYLFQGDLAPGTSHLRVPIREGVKLYERLRGELSGLSTPVYAVDLPGGG 315
Query: 318 GKV---KIDTHNIK---KVGNGSYCITDHHNIVHDYP 348
GK+ ++D ++ Y TD + YP
Sbjct: 316 GKINLLQLDPELLRTGVSQNGNDYLFTDANGNGWTYP 352
>gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421]
gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421]
Length = 342
Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats.
Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 9/331 (2%)
Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNN 82
+ I A++P LI D + RQ + E LP E DP+G++
Sbjct: 13 ESAAESIKLRLPEAVSPAFIRLIEEAEEADAKALRRQVFAAETEKISLPYESADPLGESR 72
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ +VH+Y +R+L+ C YCR+CFRR ++G + + + E Y+++
Sbjct: 73 YCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRRGFTARRQGWIPDT-EIEKITDYLKQNP 131
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I E++ +GGDP+ + +L+ +LK LR ++R +R PI P+ EL+Q LK
Sbjct: 132 DIKEILVSGGDPMSGTLGQLEALLKRLRQTSPELLIRLCTRAPIFAPELFTEELLQLLK- 190
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ KP++I H NHP E E AI NAG+ + SQSVLL+G+N+ E L L T V
Sbjct: 191 SMKPLWIIPHINHPAELGFEQKKAIDSCINAGLPMQSQSVLLRGVNNSVETLCALFHTLV 250
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ +KP YL DLA GT+ FR+ + + I L++K+SGL P + +DLPGG GK +
Sbjct: 251 CMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWRELRKKLSGLSLPQFAVDLPGGGGKFPL 310
Query: 323 DT-----HNIKKVGNGSYCITDHHNIVHDYP 348
+KK S+ V+ YP
Sbjct: 311 SILALYDTIVKKDDADSFSALGLDGKVYTYP 341
>gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2]
gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 425
Score = 319 bits (819), Expect = 4e-85, Method: Composition-based stats.
Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 49/386 (12%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
M+ R S + + + E I+ I+ + + + + + LI+ N NDPI
Sbjct: 1 MEYRAYNAKSFKKIPQIQKYLSHEDIENIEIAALVFPFKVNNYLIDKLIDWENYQNDPIF 60
Query: 58 RQFIPQKEE-------------------------------LNILPEEREDPIGDNNHSPL 86
R P K+ +N P +++ + N L
Sbjct: 61 RLVFPHKDMLLEQDFERLKALYHKGDQKALSETVYEIRMRMNPHPADQKSNVPTINDKEL 120
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G H+Y + IL C YC FCFR + K+ + + YI+ I
Sbjct: 121 TGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNELKFAMKEVDLLIEYIKAHPTI 180
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
++IFTGGDPLI+S K L+ ++ + I H+Q +RF ++ P R +
Sbjct: 181 TDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGTKTLGFWPYRFLTDSDADDLL 240
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + E G + H NH E ++E A+ R+ G I+ +Q+ +L+ IND E+
Sbjct: 241 KLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQTGAIIRTQAPILRHINDSSEV 300
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ R V + + PYY+ +F + + E KI +SGL + +
Sbjct: 301 WEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKIFKDAISNVSGLARTVRGPSM 360
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
GK+ + + ++ + +
Sbjct: 361 SAAPGKIAVS--GVSEINKEKVIVLN 384
>gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 340
Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 130/351 (37%), Positives = 190/351 (54%), Gaps = 19/351 (5%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q ++ ++ + L + Q ++ + + + A I + P+A Q
Sbjct: 4 WQSEYRDSIKTHAALEEFF---EAQFPKVD-----FPLLIPRKFATHIKKAGLDSPLANQ 55
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
F+PQ E N L E DPIGD+N SPL IVHRY +RIL VCPV CR+CFR+ +G
Sbjct: 56 FLPQVSE-NDLGGES-DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYCFRKNELG 113
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + E L Y+++ S+I E+IF+GGDPLILS +R++ L + I H++ +R
Sbjct: 114 TNDELF--KANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKIPHIKFIR 171
Query: 180 FHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
FH+R PI+ P RI + K+ + IH NH EF+EE A+S L
Sbjct: 172 FHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSLLHAHCSN 231
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
LLSQSVLLKG+N+ + L L+ ++L I+PYYLHHPD G HF LT+EEG+ + A+
Sbjct: 232 LLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEEGRNLYAT 291
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
L+ + G P YI+D+PGG GKV + + N S + + Y
Sbjct: 292 LRNHLPGWALPQYIIDIPGGEGKV---SAYNPETYNFSGHLINRKGTKVPY 339
>gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
Length = 314
Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
+ I + A LI+ N +DP+ +Q I K L+ P+ D +SP+ G++H+Y
Sbjct: 32 TFPIKIPMEFARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKY 90
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R+LL VC ++C+FCFR+ + + + + + YI +I EVI +GGD
Sbjct: 91 PNRVLLIASQVCAIHCQFCFRQNFNYVEHDAISNWVEIQ---NYIINDVKINEVILSGGD 147
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL LS +L ++ + +I+H++ LR H+R +V+P RI +L++ ++ + I +H
Sbjct: 148 PLSLSDDKLSTLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHI 207
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NH E S + I L + LLSQSVLL+G+ND E+L L + +L I PYYLH
Sbjct: 208 NHAQELSVQFAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHM 265
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
D G F + + ++ LK +SG P + D
Sbjct: 266 LDKVQGAQDFLVKDDYAIQLHQQLKSNLSGYLVPKLVRD 304
>gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402]
Length = 338
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 14/340 (4%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
N + + ++ + ++ LI P D + Q P E +
Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSY 58
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + +
Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTSRSQ-SYIGDGELK 117
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+
Sbjct: 118 EVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL+ LK+ KP+++ H NHP E E A++ AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L L + IKP YL D AAGTSHFR+ ++E + + K+SGL +P + D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAAD 296
Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
LPGG GK + I++ + S+ ++H Y
Sbjct: 297 LPGGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336
>gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 347
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 104/325 (32%), Positives = 166/325 (51%), Gaps = 7/325 (2%)
Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
+L + K T+ + L + + EQ ++ + ++I + +A + + DP+ +Q
Sbjct: 27 WRLIQRKNFTNLKILADFLALNFEQRKQLLD-KPTFAINVPYRLAQKMTKGSLEDPLVKQ 85
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
F+P K E +DP+GD ++H+Y R+LL C ++CR+CFR+
Sbjct: 86 FLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSY 145
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L I++ S I EVI +GGDPL LS+ L K+ + L I H++ +R
Sbjct: 146 QSHDKTFLKE-----LDLIRQDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIR 200
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
FH+R PI P+RI+ + ++ K ++ IH NHP E E+ + L G +LL+
Sbjct: 201 FHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLELDEDIFERLKALHLRGCVLLN 260
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLKG+ND E+L L + I PYYLH D G SHF L +EG ++ L +
Sbjct: 261 QSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK 320
Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
++SG P Y+ ++ G K I
Sbjct: 321 RLSGYAIPRYVREIAGEAHKTPIQL 345
>gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2]
gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2]
Length = 462
Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats.
Identities = 92/391 (23%), Positives = 161/391 (41%), Gaps = 48/391 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + + E + ++N + + N LIN N PNDPI +
Sbjct: 34 RFKVYTARQLDKIEPLQRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93
Query: 60 FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87
PQK LN P + E I + + ++
Sbjct: 94 TFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNPHPAGQMEHNIPEVDGEKIE 153
Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+Y + +L VC YC FCFR +++K+ YIQ +I
Sbjct: 154 GIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
+V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ + L
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAKDLLHLF 273
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +GK + + H NH E + A A+ R+ G ++ +Q LL IND+ + A
Sbjct: 274 EEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L +T VEL I PYY+ +F + + + I +++SG+ + +
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDAMKQVSGIARTARGPSMSSH 393
Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346
GKV+I + ++ G + + HD
Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422
>gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622]
gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 442
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 81/369 (21%), Positives = 149/369 (40%), Gaps = 47/369 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + ++ ++ +++ + + LI+ P DPI R
Sbjct: 16 RYRAYTTRHLDELTTRAGLSADERLAVQAVAHVLPFRTNSYVVDELIDWAAAPADPIYRL 75
Query: 60 FIPQKEEL--------------------------NILPEEREDPIGD--------NNHSP 85
PQ + L I P G N P
Sbjct: 76 VFPQADMLPTEDVARMVDLLSSGASPLELNAAANEIRARLNPHPAGQMQLNVPKLANEEP 135
Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
+ G+ H+Y + +L+ C YC +CFR +S++ E + YI+ +
Sbjct: 136 VPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIRAHPE 195
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
+ V+FTGGDP+I++ L K ++ L I+H++ +R ++ PQR +
Sbjct: 196 VTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDADDILR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + +GK + H +HP E E A+ R+ G ++ +Q+ L++ IND P
Sbjct: 256 LFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDTPGTW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
++ RT + + PYY+ +F + + E I + + +SGL + +
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRGPSMS 375
Query: 315 GGYGKVKID 323
GKV +D
Sbjct: 376 ATPGKVCVD 384
>gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
Length = 452
Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 50/371 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + + N + + E+K +++ + +AN LI+ N P DPI +
Sbjct: 17 RFKVYQQRQLDKIELVNRLPEALKFEMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQL 76
Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
PQK E+N P + + + + L
Sbjct: 77 SFPQKGMLAPEAFERMATLLRQNPSPQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKL 136
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR K +S D + Y+ +I
Sbjct: 137 PGMQHKYKETALFFPAQGQYCHSYCTFCFRWAQFVG-KAMRFNSNDADTLHRYLAAHPEI 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPE------ 195
+++ TGGDP+++ ++ + ++ L HVQ +RF ++ P R +
Sbjct: 196 SDLLITGGDPMVMKTTKIAQYVEPLIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADEL 255
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L +AGK V I H NH E + A+ R+ G + +Q+ LLK IND+ +
Sbjct: 256 LALFRRLVKAGKHVSIMAHLNHWQEMETPIFEEAVRRIRATGANIRAQAPLLKNINDNAD 315
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A + + V+L I PYY+ +F + + + +I K+SGL +
Sbjct: 316 DWARMWQKQVKLGIIPYYMFVERDTGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPS 375
Query: 313 LPGGYGKVKID 323
+ G GKV+I
Sbjct: 376 MSAGPGKVEIQ 386
>gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405]
gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC
35405]
Length = 338
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 14/340 (4%)
Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
N + + ++ + ++ LI P D + Q P E +
Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSY 58
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + +
Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELK 117
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+
Sbjct: 118 AVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL+ LK+ KP+++ H NHP E +E A++ AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
L L + IKP YL D AAGTSHFR+ ++E + ++ K+SGL +P + +D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVD 296
Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
LP G GK + I++ + S+ ++H Y
Sbjct: 297 LPEGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336
>gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718]
gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718]
Length = 452
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 49/390 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T + KEQ E+ ++N + + + LI+ +N P DP+ +
Sbjct: 20 RFQVYTERQLDKIRPLERFTKEQRFEMHVVANVLPFRVNQYVIDELIDWNNIPADPVFQL 79
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
PQ+ L ER P G + PL
Sbjct: 80 TFPQRNMLEPEDFERMAEALRRDAQRSEIQAIAVDIRSKLNPHPAGQQEMNVPVFHGEPL 139
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G H+Y + +L VC YC FCFR K +S + Y+ +
Sbjct: 140 PGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGHKDV 199
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE------ 195
+++ TGGDP+++ L+ L+ + ++HVQ +R ++ PQR + E
Sbjct: 200 TDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAHELL 259
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++ L +AGK V + H NH E + A+ R+ AG+++ +Q+ +++ INDDP +
Sbjct: 260 ALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDDPAV 319
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + RT V + I PYY+ +F + +E +I +++SGL + +
Sbjct: 320 WAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRGPSM 379
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
G GKV+I ++ G + +
Sbjct: 380 SAGPGKVEIQG-IVELNGEKIFILRFIQGR 408
>gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
ammonificans HB-1]
Length = 343
Score = 313 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 7/347 (2%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
+ +TS + L + + + + + Y + T A L + + R +P E
Sbjct: 2 RVITSLEALEGLLPLSPREREAFRAVVPVYPFSTTEYYARL---AAESFAVRRMLLPSLE 58
Query: 66 ELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
ELN + DP+ + + HRYPDR+L+ + CPV CRFC R+ +
Sbjct: 59 ELNPELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRFCMRKRNW-RRPL 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S + +A L+Y++ Q+ +V+ +GG+PL+L + L+++L L+ I+ V+++R +R
Sbjct: 118 FTISEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKKIESVEVVRIGTR 177
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+P+V+P + + L E + V++ H NHP E + EA A+ L G+ + +Q+VL
Sbjct: 178 LPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALLKCGVPVNNQTVL 237
Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
LKG+ND +L L R ++++PYYL H D G HF I G K++ L+ ++S
Sbjct: 238 LKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGLKLLEELQTRLSP 297
Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
L P+Y +D PGGYGKV + +K+G Y P +
Sbjct: 298 LALPYYAVDGPGGYGKVPMLPVRFEKLG-SVYRFRSFSGRYFTMPDR 343
>gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1]
gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 462
Score = 313 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 50/390 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+ T + + + Q E+K +S+ + + + LI+ N P DP+ +
Sbjct: 24 FKVYTQRDFDQIVPLAKLSEAQRFEMKVVSSVLPFRVNQYVIDELIDWDNIPADPMFQLT 83
Query: 61 IPQK--------------------------------EELNILPEERE--DPIGDNNHSPL 86
PQ+ ELN P ++ + D + + L
Sbjct: 84 FPQRGMLAPEHFDRIATLLEHGADKKDVDAAVDAVRHELNPHPADQMEMNMPRDEHGNRL 143
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+GI H+Y + +L C YC FCFR K ++S + E AY++ ++
Sbjct: 144 EGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAYLRHHCEV 203
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+++FTGGDP+++ + L+ L+ L H+Q +R ++ P R
Sbjct: 204 TDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGADDADELI 263
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGINDDPEI 253
L++ L EAGK V + H NH E EA AA+ RL AG+++ Q L+ +NDDP++
Sbjct: 264 ALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAHLNDDPDV 323
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + +T V L I PYY+ ++F + + +I +++SGL + +
Sbjct: 324 WARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGRTARGPSM 383
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV+I + G + +
Sbjct: 384 SASPGKVEIQGV-TEVAGEKVFVLRFIQGR 412
>gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
Length = 418
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 100/382 (26%), Positives = 163/382 (42%), Gaps = 50/382 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+ + TL + + + + +EQ++EIK +S+ Y + NLI+ +N PNDPI R
Sbjct: 3 KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62
Query: 60 FIPQKEELNILPEER-------------------------EDPIGDNNHS-------PLK 87
P KE L E+ P G + L+
Sbjct: 63 NFPHKEMLIPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKKLE 122
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+Y D +L C YC FCFR + + SK+ + L Y+ E QI
Sbjct: 123 GIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQIT 182
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
EV+FTGGDP+I++ + L ++ L + ++ +R ++ P + + ++
Sbjct: 183 EVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLNVL 242
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +AGK + H NHP E AI +L + G ++ +QS LL+ IN+D +
Sbjct: 243 RKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTWTT 302
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ V+L PYY+ P +F T+E K+ SGL +
Sbjct: 303 MWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMSMT 362
Query: 317 YGKVKIDTHNIKKVGNGSYCIT 338
+GKV+I V N SY +
Sbjct: 363 HGKVEI-----LGVKNNSYTLR 379
>gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina
loihiensis L2TR]
Length = 448
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 52/369 (14%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+H+ L + L + + E+K ++N + + N LI+ N PNDP+ +
Sbjct: 20 YQHRQLDKIEALKK---VPDDMRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 76
Query: 61 IPQKEELNILPEER--------------------------EDPIGDNNHS-------PLK 87
PQK+ L +R P G + PL
Sbjct: 77 FPQKDMLEPSAYQRMADLMSGKHTTNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLP 136
Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++
Sbjct: 137 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 195
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
+++ TGGDP+++ ++L L+ L +H++ +R ++ P R +
Sbjct: 196 DLLVTGGDPMVMRTRKLAHYLEGLLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLR 255
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
L++ L + GK V I H NHP E E AI RL G+ + Q+ LLK INDDP++
Sbjct: 256 LLERLVDGGKHVSIMAHLNHPNELRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVW 315
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A++ V+L + PYY+ +F + +E +I +++SG+ + +
Sbjct: 316 ASMWEKQVQLGLIPYYMFVERDTGAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMS 375
Query: 315 GGYGKVKID 323
G GKV++
Sbjct: 376 AGPGKVEVQ 384
>gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
Length = 241
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 2/242 (0%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
P G++ +Y R LL + C + CR+CFRR + LS +D A+ + E ++
Sbjct: 1 MPATGLIRKYDSRALLMVTGQCAINCRYCFRRHFPY--EDHRLSPEDRTQAIKTLSEDTR 58
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ EVIF+GGDPL+ + + L + L I H++ LR H+R+P+V PQR+ LI+ L +
Sbjct: 59 LNEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGS 118
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ IH NHP E + A+ RL AGI LL+QSV+LKG+ND+ +LA L E
Sbjct: 119 RLQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFE 178
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ PYYLH D AG HF ++ + + +V L + G P + ++PG GK +D
Sbjct: 179 CGVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238
Query: 324 TH 325
Sbjct: 239 LF 240
>gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
OS145]
Length = 457
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 52/369 (14%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+H+ L + L + + E+K ++N + + N LI+ N PNDP+ +
Sbjct: 29 YQHRQLDKIEALKR---VPDDIRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 85
Query: 61 IPQKE--------------------------------ELNILP-EEREDPIGDNNHSPLK 87
PQK+ E+N P + + + + PL
Sbjct: 86 FPQKDMLDPSAFQRMADLMSGKHTTNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLP 145
Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++
Sbjct: 146 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 204
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
+++ TGGDP+++ ++L+ L+ L H++ +R ++ P R +
Sbjct: 205 DLLVTGGDPMVMRTRKLKHYLEGLLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMR 264
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
L++ L GK V I H NH E E AI RL G + Q+ LL+ INDDP++
Sbjct: 265 LLEKLVRGGKHVSIMAHLNHHNELRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVW 324
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A++ V+L + PYY+ +F + +E ++ +++SG+ + +
Sbjct: 325 ADMWEREVQLGMIPYYMFVERDTGAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMS 384
Query: 315 GGYGKVKID 323
G GKV++
Sbjct: 385 AGPGKVEVQ 393
>gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
Length = 432
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 45/361 (12%)
Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQK 64
TL + + + E++ + P + + LI+ P DPI + PQ+
Sbjct: 16 TLKNIHRHPAYRRLPESLRRELEVAAQVLPFRTNPYVLDELIDWDRAPEDPIFQLVFPQR 75
Query: 65 EE-------------------------------LNILP-EEREDPIGDNNHSPLKGIVHR 92
+N P + + + + L G+ H+
Sbjct: 76 GMLDSETYARVEAALTSGDREALVEAVWNARRAMNPHPAGQLTHNVPELDGRKLDGLQHK 135
Query: 93 YPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
Y + +L C YC +CFR + S + + Y++ ++ +V+ T
Sbjct: 136 YAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPEVTDVLVT 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
GGDP+++ + L + L+ L ++ ++ +R S+ P R + L + +
Sbjct: 196 GGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLRLFERVAA 255
Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
AGK + H +HP E +E+ AAI L G ++ +Q+ L++ +NDD ++ A R
Sbjct: 256 AGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVWAEKWRRE 315
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L + PYY+ +F + + E Q+I A ++SGL + + GKV+
Sbjct: 316 VRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMSAFPGKVR 375
Query: 322 I 322
+
Sbjct: 376 V 376
>gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 442
Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats.
Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 51/388 (13%)
Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINP-HNPNDPI 56
M+ R +T Q DL + +++ E++ ++N + + + LI+ P+DPI
Sbjct: 1 MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60
Query: 57 ARQFIPQKEE--------------------------------LNILP-EEREDPIGDNNH 83
R P +E LN P +RE + +
Sbjct: 61 FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120
Query: 84 SPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P+ G+ H+Y +L+ C YC +CFR ++ + Y++
Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----P 194
++ +V+ TGGDPLI+S L + + L ++HV +R ++ + P R+
Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240
Query: 195 ELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
EL++ ++ AGK V I +H +HP E EA AA++RL +AG ++ +Q+ +++ +ND
Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
P+ A + R V L I+PYY +S F + + I + +SGL +
Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360
Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
+ GK+ ID + G + +
Sbjct: 361 PVMSATPGKIAIDGETVVN-GERLFVLR 387
>gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM
44728]
gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length = 432
Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats.
Identities = 80/385 (20%), Positives = 158/385 (41%), Gaps = 54/385 (14%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T ++L + EQ + ++ + + LI+ P+DPI R
Sbjct: 12 RFRAYTARHLEELLTRAGLSPEQRLRARAVATVLPFRTNDYVIDELIDWDAAPDDPIYRL 71
Query: 60 FIPQKEEL--------------------------------NILPEEREDP----IGDNNH 83
PQ++ L N P + D +G+ +
Sbjct: 72 VFPQEDMLPAEDVSKLAKLLDADPKGPELKAEVFAIRRRLNPHPAGQLDLNKPKLGEAD- 130
Query: 84 SPLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ G+ H+YP+ +L C YC +CFR + ++S D +A + YI+
Sbjct: 131 --IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAH 188
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------N 193
+I V+ TGGD +I+ L++ ++ L ++ ++ +R ++ PQR
Sbjct: 189 PEITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDT 248
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + + E+GK + H +H E + A+ R+ + G ++ +Q+ L+K INDDP+
Sbjct: 249 LRLFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQ 308
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ +++ R + + PYY+ +F + + I ++SGLC+
Sbjct: 309 VWSDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPS 368
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337
+ GKV +D + ++ +
Sbjct: 369 MSADPGKVAVD--GVVEINGTRVFV 391
>gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
Length = 442
Score = 309 bits (793), Expect = 4e-82, Method: Composition-based stats.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 48/388 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHNPN-DPIARQF 60
+ LT+ +++ + KE++ I+ + + LI+ + DPI
Sbjct: 5 YQAYGLTNYRNIRQITRLNKEELQAIEVVGRVLPFKTNNYVVEELIDWERIDTDPIFTLN 64
Query: 61 IPQKE--------------------------------ELNILPEEREDPIGDNNHSPLKG 88
P++E ELN P ++ + LKG
Sbjct: 65 FPRREMLSKKHFSVVSKLLAQEVGKEEFIAAVNAVRLELNPNPAGQDHNVPMLGDIRLKG 124
Query: 89 IVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+Y + +L C YC FCFR + K+T+ L Y++ Q+ +
Sbjct: 125 IQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFAMKETDLLLKYLRLHPQVTD 184
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
V+FTGGDP+ +S L ++ L ++H++ +R S+ P R + L
Sbjct: 185 VLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKALAYWPYRFISDVDAAEVLRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK + H NHP E + AI R+ N G + +QS LL+ IND PEI
Sbjct: 245 FEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQIRTQSPLLRHINDSPEIWR 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ R V+L PYY+ +F + +E+ I ++SG+C+ +
Sbjct: 305 EMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRKAYSQVSGICRTVRGPSMSD 364
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ K G + +
Sbjct: 365 EPGKIQLLGVAEIK-GEKVFVLRFIQGR 391
>gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
Length = 433
Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats.
Identities = 89/382 (23%), Positives = 165/382 (43%), Gaps = 48/382 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+ R T + +L + EQI IK ++ Y + +A NLI+ P+DP+ R
Sbjct: 3 KYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFRL 62
Query: 60 FIPQK-----EELNILPE---------------------EREDPIGDNNHS-------PL 86
PQ +E N L + +P G + L
Sbjct: 63 SFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIAL 122
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L VC YC +CFR ++ D ++Y++E ++
Sbjct: 123 HGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPEV 182
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
++IFTGGDP+++S + L+K ++ L I ++ +R ++ P R + L
Sbjct: 183 KDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILRL 242
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + AGK + I H +HP E + A+ AI+R+ + G ++ SQS +++ IND+ +
Sbjct: 243 FEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTWE 302
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ + + L I PYY+ +F + + E I + K+SGL + +
Sbjct: 303 AMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGLGRTVRGPSMSC 362
Query: 316 GYGKVKIDTHNIKKVGNGSYCI 337
GK+ + +I ++ +
Sbjct: 363 SPGKIIV--EDITEIDEKKVFV 382
>gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
Length = 465
Score = 308 bits (791), Expect = 6e-82, Method: Composition-based stats.
Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 48/371 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
+ + T + L+ E + + +S + P + N LI+ P+DPI R
Sbjct: 7 WKFKPYTRHTVSQSPRWQLLPSELQEAVDVVSRVLPFRVNPYVLNELIDWDKVPDDPIYR 66
Query: 59 QFIPQKEELNILPE--------ERED------------------PIGDNNHS-------P 85
P ++ L E D P G H+ P
Sbjct: 67 LTFPHRDMLKDHEYAAIRDLVRECADEARIEAVVRQIRLRMNPHPAGQLTHNVPYLDGVP 126
Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC FCFR ++ ++ AY++ +
Sbjct: 127 LSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHPE 186
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPEL 196
+ +++ TGGDPL++S + L + L+ L H+Q +R ++ PQR + +L
Sbjct: 187 VTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDDL 246
Query: 197 IQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
++ ++ +G+ + I H NHP E A A+ R+ G + Q+ L++ IN+DP
Sbjct: 247 LRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDPA 306
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A L T V L PYY+ + +F+L + +I + +SGL +
Sbjct: 307 AWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGPS 366
Query: 313 LPGGYGKVKID 323
+ GKV +D
Sbjct: 367 MSAFPGKVMVD 377
>gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC
BAA-286]
Length = 444
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 97/389 (24%), Positives = 162/389 (41%), Gaps = 48/389 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
QL+ TL + Q + I KE + +I+ + + + LI+ N DPI
Sbjct: 7 QLKTYTLHNYQSIPQMAGIPKEFVRDIEIVGRVLPFKTNNYVIDELIDWDNIETDPIFTL 66
Query: 60 FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87
P++ L+ I +P G ++ P LK
Sbjct: 67 NFPRRGMLDKKHYAIVEKLLDGNAEKSFIDAKIQEIRLSLNPNPAGQEHNVPSLGEIKLK 126
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+YP+ +L C YC FCFR G + K+ + L Y++ ++
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLLKYLRVHKEVT 186
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP++++ L + L H++ +R ++ P R +
Sbjct: 187 DVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDTDSDDIIR 246
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + ++GK + I H NHP E +E AI R+ + G + +QS LLK IND PEI
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQIRTQSPLLKHINDKPEIW 306
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A + R V+L PYY+ +F L +E+ I +++SGLC+ +
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ K G + +
Sbjct: 367 DHAGKIQVLGVQEIK-GEKIFILRFIQGR 394
>gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM
22836]
Length = 444
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 103/407 (25%), Positives = 170/407 (41%), Gaps = 57/407 (14%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQ 59
QL+ TL + Q + I KE + I+ + + + LI+ N + DPI
Sbjct: 7 QLKTYTLHNYQSIPQIANIPKEFVKHIEVVGRVLPFKTNNYVIDELIDWDNIDTDPIFTL 66
Query: 60 FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87
P+K L+ I +P G ++ P LK
Sbjct: 67 NFPRKGMLDKKHYAIVEQLLDDNVEKSIIEDKIHKIRLSLNPNPAGQEHNVPSLGEVKLK 126
Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
GI H+YP+ +L C YC FCFR + K+ + L Y++ ++
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSELKFAMKEVDLLLKYLRVHKEVT 186
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
+V+FTGGDP++++ L +K L H++ +R ++ P R +
Sbjct: 187 DVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDSDSDDIIR 246
Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + ++GK + I H NHP E ++ AI R+ N G + +QS LLK IND PEI
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNTGAQIRTQSPLLKHINDKPEIW 306
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A + R V+L PYY+ +F L +E+ I +++SGLC+ +
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366
Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI----VH-----DYPPKSS 352
GK+++ K G + + VH +Y PK++
Sbjct: 367 DHAGKIQVLGVQEIK-GEKLFVLRFIQGRNPKWVHIPFFAEYDPKAT 412
>gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 332
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%)
Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
KT T + + + E + + ++ + A+LI N +P + R
Sbjct: 16 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 72
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR
Sbjct: 73 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 132
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ S ++ + IWEVI +GGDPL L + +++ + + V L
Sbjct: 133 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 187
Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R H+R+PI+ P + + + L+E A + +H NHP E EE+ A ++L +G
Sbjct: 188 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 246
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A
Sbjct: 247 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 306
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
++ K+ G P + ++ G K I
Sbjct: 307 IRTKLPGYLVPKLVREIAGEKSKTPI 332
>gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
ATCC 23134]
Length = 448
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 49/370 (13%)
Query: 2 QLRHKTLTSAQDLYNAN-LIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
+ ++ TL + +++ + +++ I+ + N + LI+ N NDPI
Sbjct: 3 KYQNYTLKNFRNIPYVESKLSEDEKFAIEVVGNVLPFKANNYVVEELIDWDNYANDPIFI 62
Query: 59 QFIPQKEEL--------------------------------NILP-EEREDPIGDNNHSP 85
PQK+ L N P + +D + + +
Sbjct: 63 LTFPQKDMLKPEHFAHVAHLLKSGVSRADLKTEVNKIRLQLNPHPAGQMKDNVPEVDGVK 122
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC FCFR + ++TE + YI+
Sbjct: 123 LTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRETELLVKYIKVNPH 182
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------ 195
I +++FTGGDPLI+ K L + L + +++ +R ++ PQR +
Sbjct: 183 ITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYWPQRFTSDTDADDL 242
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + + +AGK + H NH E +EE AI R+ N G + +QS ++K IND E
Sbjct: 243 LRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRTQSPIMKNINDSAE 302
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
A + R V+L PYY+ +F + ++ +I +++SG+C+
Sbjct: 303 AWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQQVSGVCRTVRGPS 362
Query: 313 LPGGYGKVKI 322
+ G GKV++
Sbjct: 363 MSAGPGKVQV 372
>gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T]
gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 484
Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats.
Identities = 89/392 (22%), Positives = 159/392 (40%), Gaps = 50/392 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M + T + + EQ E+K ++ + + + LI+ + P DPI +
Sbjct: 46 MSFKVFTARDLDRIPQLARLSPEQRFEMKVVAAVLPFRVNQYVIDELIDWADVPRDPIFQ 105
Query: 59 QFIPQKEELNILPEER----------EDPIG------------------------DNNHS 84
PQ+ L ER +D + D +
Sbjct: 106 LTFPQRGMLASEHYERIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPLDEHGK 165
Query: 85 PLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ G+ H+Y + +L C YC FCFR K ++S + Y++ +
Sbjct: 166 RIDGLQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHT 225
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PE 195
++ +++ TGGDP+++ + L++ L+ L H+Q +R S+ P R +
Sbjct: 226 EVTDLLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADD 285
Query: 196 LIQCLK---EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L++ L+ EAGK V + H NH E ++ A AAI R+ G ++ +Q L+ INDDP
Sbjct: 286 LMRLLRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDP 345
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
A L +T V L + PYY+ +F + + +I +++SGL +
Sbjct: 346 AAWARLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGP 405
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+ GKV+I + G + +
Sbjct: 406 SMSASPGKVEIQGV-TEIAGEKVFVLRFIQGR 436
>gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
14365]
Length = 458
Score = 305 bits (783), Expect = 5e-81, Method: Composition-based stats.
Identities = 79/370 (21%), Positives = 160/370 (43%), Gaps = 50/370 (13%)
Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + +TS L + + + E ++K +++ + + + N LI+ P+DP+ +
Sbjct: 15 KFRVITSKHLGQLDHLSFLSTETRQQLKAVASVFPFRVNEYVVNHLIDWSKVPDDPMFQL 74
Query: 60 FIPQKEELNILP-EERED-------------------------PIGDNNHSP-------L 86
PQ L D P G + +
Sbjct: 75 TFPQPGMLTDDDMAHMLDLIRRDEPEETITRAAQRIQMRLNPHPAGQMALNVPRVNGKVV 134
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+G+ H+Y + +L C YC +CFR S ++++ E LAY++E I
Sbjct: 135 RGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLKEHPGI 194
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELI 197
+V+FTGGDP+++ L++ ++ L + HV +R ++ P+ P R EL+
Sbjct: 195 SDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGNDADELL 254
Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ +E GK + + +H +H E + E A++R+ G ++ Q+ L++ +ND PE+
Sbjct: 255 RLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVNDTPEV 314
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ + V+ PYY+ +F++ + I + ++++SGL + +
Sbjct: 315 WTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSRTVRGPVM 374
Query: 314 PGGYGKVKID 323
GKV ++
Sbjct: 375 SCTPGKVLVN 384
>gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 322
Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%)
Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
KT T + + + E + + ++ + A+LI N +P + R
Sbjct: 6 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 62
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
+ +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR
Sbjct: 63 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 122
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ S ++ + IWEVI +GGDPL L + +++ + + V L
Sbjct: 123 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 177
Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
R H+R+PI+ P + + + L+E A + +H NHP E EE+ A ++L +G
Sbjct: 178 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 236
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A
Sbjct: 237 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 296
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
++ K+ G P + ++ G K I
Sbjct: 297 IRTKLPGYLVPKLVREIAGEKSKTPI 322
>gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
Length = 310
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 157/297 (52%), Gaps = 12/297 (4%)
Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
KKE+I+ + N+ + +PNDPI Q IP+ EEL+ + DP+
Sbjct: 11 FTKKEEIEN-----KEFPFRSPLEFLNIADFDDPNDPILLQIIPKLEELDTVKGFNLDPV 65
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
D+ H + G++H+Y DR+LL CP++CR+CFR+ S + + EA L+YI
Sbjct: 66 NDSQHEKITGLIHKYHDRVLLLFSKHCPIHCRYCFRKGYNYSDN----NKQQIEAWLSYI 121
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ I EVI +GGDPL ++ L + + IKH+ R HSR+P+V P ++ L
Sbjct: 122 ESNHDIEEVILSGGDPLFVNSATLLDFVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLAN 181
Query: 199 CLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
++ A K + + IH+NH E ++E + ++S G I+L+ SVLLKGIND+ L
Sbjct: 182 RIRRAAKKDIDMILVIHSNHEKELTDEVVKSVSSFQAEGFIILNHSVLLKGINDNALTLK 241
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+L R + + + PYYL+ D G++HF + I L++ SG P + D
Sbjct: 242 SLSRKLIRMGVIPYYLNLLDKIEGSAHFFVEKNISLSIYQELQKISSGYLVPKLVQD 298
>gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
Length = 441
Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats.
Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 48/367 (13%)
Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHN-PNDPIARQ 59
R++ +T+ + E + + +S + LI+ P DPI +
Sbjct: 12 RYRAITNQNIHKYSEWERLDPELKEAVMVVSQVLPFRTNEYVMRELIDWSRVPEDPIFQL 71
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
PQ+E L+ ER P G H+ L
Sbjct: 72 TFPQREMLDPEDYERIRTLLNNGASREELLAAANEIRFRLNPHPAGQLTHNVPTLNGRKL 131
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC +CFR + +++T+ +AY+Q ++
Sbjct: 132 PGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQAHPEV 191
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP+I+ K L+K L+ L I ++ +R ++ PQR +
Sbjct: 192 TDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADADDALRF 251
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + AGK + I H++HP E + A AI R+ G ++ +Q+ L+K +NDDP++ A
Sbjct: 252 FEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDDPDVWA 311
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
R V+L + PYY+ +F + + Q+I A+ ++SGL + +
Sbjct: 312 EKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRGPSMSA 371
Query: 316 GYGKVKI 322
GKV+I
Sbjct: 372 FPGKVRI 378
>gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC
BAA-286]
Length = 441
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 89/388 (22%), Positives = 161/388 (41%), Gaps = 48/388 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
L+ TL + + + +E + +I+ + + + LI+ N + DPI
Sbjct: 5 LKSYTLHNFLSIPQIASLSEEMVRDIEVVGRVLPFKTNNYVVDELIDWDNLDTDPIFTLN 64
Query: 61 IPQKEELN--------------------------ILPEEREDPIGDNNHSP------LKG 88
P++ L I +P G ++ P LKG
Sbjct: 65 FPRRGMLEKKHYAAVERLLNEHFDGKELNEKIQQIRLSLNPNPAGQEHNVPYLGEIKLKG 124
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+YP+ +L C YC FCFR G + K+ + Y++ ++ +
Sbjct: 125 IQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLFKYLRLHKEVTD 184
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
++FTGGDP+I++ L+ ++ L H++ +R ++ P R + L
Sbjct: 185 ILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSLAYWPYRYLTDKDSDDIIRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + +GK + + H NHP E +E AI+R+ + G + +QS LL+ IND PE+ A
Sbjct: 245 FELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQIRTQSPLLRNINDKPELWA 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ R V+L PYY+ +F L +E+ +I ++SGLC+ +
Sbjct: 305 RMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRRAYRQVSGLCRTVRGPSMSD 364
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GK+++ K G + +
Sbjct: 365 HAGKIQVLGVQEIK-GEKIFVLRFIQGR 391
>gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 440
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 85/390 (21%), Positives = 162/390 (41%), Gaps = 48/390 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPH-NPNDPIAR 58
MQ + TL + +++ + ++I +I+ + + NLI+ DP+
Sbjct: 1 MQYKPFTLNNFREIPQVEALSLQKIRDIEVVGTVLPFRTNNYVVDNLIDWECAETDPLFI 60
Query: 59 QFIPQKEELNILPEERED--------------------------PIGDNNHSP------- 85
PQK L+ R D P G +
Sbjct: 61 ATFPQKGMLSPEDYHRVDTLLREGAGQEVILRTVTEIRQKMNPHPAGQLELNVPVLNGES 120
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS 142
L GI H+Y + +L C YC FCFR V + ++S++ + + Y++ +
Sbjct: 121 LPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYLKSRP 180
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE------ 195
++ +V+ TGGDPL++ L + ++ L + ++ +R +R P R + +
Sbjct: 181 EVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDAEELL 240
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253
L + ++EAGK + H NHP E E + A+ R+ G ++ +QS LL+ IND +
Sbjct: 241 TLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHINDSEAL 300
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + R V++ PYY+ +F +T+++ ++ + ISG+C+ +
Sbjct: 301 WAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICRTAEGPVM 360
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
GKV++ G+ + +
Sbjct: 361 SALPGKVQVMGTATIG-GDKVFVLRLVQGR 389
>gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
Length = 433
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 81/370 (21%), Positives = 158/370 (42%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + +L + + KE+ ++ + + + I + LI+ N P+DPI R
Sbjct: 9 KFQPYSLRNIHHAPQWQKLSKEEKHSLEVLGAVFPFKVNQYILDELIDWGNIPDDPIFRL 68
Query: 60 FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86
P K+ L + +P G H+ P+
Sbjct: 69 TFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMNPNPAGQMTHNVPRMNGVPI 128
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR ++ +E + Y++E ++
Sbjct: 129 NGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLRFEARSSEPLVQYLKEHKEV 188
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+ TGGDPL+++ + L + ++ L ++H++ +R ++ PQR +
Sbjct: 189 TDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTKSISYWPQRFVTDKDADDLL 248
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + GK + + H NHP E ++ A A+ R+ G+ + QS ++K IND+P+
Sbjct: 249 HLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTGVTVRMQSPIIKHINDNPQA 308
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+L T V+L PYY+ +++F + + +I + +SGL + +
Sbjct: 309 WVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIFQKAYQSVSGLARTVRGPSM 368
Query: 314 PGGYGKVKID 323
GK+ +D
Sbjct: 369 STFPGKIMVD 378
>gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
Length = 454
Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats.
Identities = 81/385 (21%), Positives = 148/385 (38%), Gaps = 48/385 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
+ + S + + I E + + IS + + LI+ P+DP+ R
Sbjct: 5 KFKAYNAKSIANSPYWSRIPNEIKEALGTISRVLPFRINEYVLRELIDWERVPDDPVFRL 64
Query: 60 FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86
P +N P + + + PL
Sbjct: 65 TFPHPGMLPADDYRRLRELLAQGADPAAGARYIDALRHRMNPHPAGQMTHNVPMLDGRPL 124
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR + ++++++ Y++ ++
Sbjct: 125 PGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFNARESDELSRYLRLHPEV 184
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP++++ + L ++ L I H+Q +R ++ PQR + L
Sbjct: 185 TDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAYWPQRFVTDKDADAVLRL 244
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK + + H NHP E E A A+ R+ G + QS +++ IND E
Sbjct: 245 FERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVRMQSPIVRHINDSAETWQ 304
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
L T V L PYY+ +F L + + I + +++SGL + +
Sbjct: 305 ELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAYQRVSGLSRTVRGPSMST 364
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340
YGKV +D + +G
Sbjct: 365 LYGKVLVD--GVVTLGGEKVFALQF 387
>gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
SCM1]
Length = 448
Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 84/369 (22%), Positives = 149/369 (40%), Gaps = 49/369 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
L+ TL++ +DL I +E+ E++ + N + LIN ++ PNDP+
Sbjct: 14 LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73
Query: 61 IPQKEEL--------------------------NILPEEREDPIGD--------NNHSPL 86
PQ+ L I + P G + + L
Sbjct: 74 FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y+ E +I
Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+FTGGDP+I+ K K + L + +++ +R ++ P + +
Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ Q + ++G + H NH E + +AI + G + +QS LL INDD E+
Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
AN+ V+L PYY+ +F + + + +I + +SGL + +
Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373
Query: 314 PGGYGKVKI 322
GKV++
Sbjct: 374 SATPGKVQV 382
>gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
Length = 445
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 82/370 (22%), Positives = 148/370 (40%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
++R + + + ++ IK ++ I LI+ +N PNDP+ R
Sbjct: 9 KIRFYGAKNLDSIPQLSNFSEQDRLGIKAVAQVLPFLTNNYILEQLIDWNNVPNDPMFRL 68
Query: 60 FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86
P E L P G H+ P+
Sbjct: 69 TFPHPEMLESKDYNHIIQLLTENAPKTVLKQAANKIRQQLNPHPSGQKQHNVPTFNSEPV 128
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
GI H+Y + +L+ C YC FCFR +G +++++ Y+Q+ ++
Sbjct: 129 PGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVGLEGLKFATRESGMFQQYLQQHQEV 188
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQR-INPE------ 195
+V+FTGGDP+ + ++L + L H+Q +R ++ P R + E
Sbjct: 189 RDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTIRIGTKSISFWPYRYVTDEDADNTL 248
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + + GK + I H H E + A AI R+ + G + +Q+ +++ IND E
Sbjct: 249 RLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRRIRSTGAQIRTQAPVVRHINDSAET 308
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A +++ V L PYY+ +F + + +I +++SGL + +
Sbjct: 309 WAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVRVLEIYREAVKQVSGLARTIRGPLM 368
Query: 314 PGGYGKVKID 323
GKV ID
Sbjct: 369 SALPGKVAID 378
>gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
Length = 445
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 82/362 (22%), Positives = 146/362 (40%), Gaps = 48/362 (13%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL 67
++L + + +K +S + + I LI+ +N P+DPI R P + L
Sbjct: 16 DIENLPQLQKLPSHERLAMKAVSKVFPFRVNNYIVEQLIDWNNLPDDPIFRMTFPHPDML 75
Query: 68 NI--------------------------------LPEERED-PIGDNNHSPLKGIVHRYP 94
N P + D + + + GI H+YP
Sbjct: 76 NPEDLNRVIKLLKTNGSKETIRRTVDDIRSRLNPHPGGQVDYNVPRLDGELISGIQHKYP 135
Query: 95 DRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
D +L+ C YC+FCFR +++++ Y+++ ++ +V+ TGG
Sbjct: 136 DTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKEVTDVVLTGG 195
Query: 153 DPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
DP+I+S +RL + ++ L +H+Q +R ++ P R + L + +
Sbjct: 196 DPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDVLRLFEKIVY 255
Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+GK + + H H E + A AI R+ + G L +QS LLK +ND + +
Sbjct: 256 SGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSARAWRKMWQMQ 315
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L PYY+ +F + + +I + +SGL Q + GKV
Sbjct: 316 VRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQTVRGPVMSALPGKVL 375
Query: 322 ID 323
I
Sbjct: 376 IS 377
>gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183]
gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
Length = 446
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 74/368 (20%), Positives = 142/368 (38%), Gaps = 46/368 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R T +L + +Q I+ ++ + LI+ P+DPI R
Sbjct: 18 KFRAYTAKHLDELTARAGLSADQRLAIRAVATVLPFRTNSYVVEELIDWSAAPDDPIYRL 77
Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
PQ++ L N P + + + +
Sbjct: 78 VFPQEDMLPADDVAHIAGLLRRQAPRQEIEAAAHRVRMRLNPHPAGQLELNVPSFGDGVV 137
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC +CFR + L+ D Y+ ++
Sbjct: 138 PGMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRV 197
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
V+FTGGD +I+ L++ ++ L ++ ++ +R ++ PQ+ + L
Sbjct: 198 TNVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRL 257
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + AGK + H +HP E A+ R+ G ++ +Q+ L++ INDDP++
Sbjct: 258 FEQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWE 317
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ RT + + PYY+ +F + + +I +SGL + +
Sbjct: 318 TMWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSA 377
Query: 316 GYGKVKID 323
GKV +D
Sbjct: 378 TPGKVCVD 385
>gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
Length = 449
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + TL + E ++ +S+ + I + LI+ N P+DPI R
Sbjct: 6 KFQPYTLRNINQAPQWQNFTSEMRHSVEVLSHVLPFRVNQYILDELIDWDNIPDDPIFRL 65
Query: 60 FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86
P K+ +N P + + ++ PL
Sbjct: 66 TFPHKDMLRSEEFSQLSDAITRQAGDAELQMLVNKIRMRMNPHPAGQLTHNVPILDNEPL 125
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR +++++ + Y++ +++
Sbjct: 126 SGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQMLVEYLKRHTEV 185
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN-----PELI 197
+++ TGGDP+I++ + L ++ L + H++ +R ++ PQR +++
Sbjct: 186 TDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRYLTDKDADDVL 245
Query: 198 QCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEI 253
+ +E +G+ + + H NHP+E E A+ R+ + G + QS L++ IND+P+
Sbjct: 246 RIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPLIRHINDNPKD 305
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L T V L PYY+ +F + + +I + +SGL + +
Sbjct: 306 WATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSGLARTVRGPSM 365
Query: 314 PGGYGKVKID 323
GK+ ID
Sbjct: 366 SAFPGKIMID 375
>gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
Length = 466
Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 49/385 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
+ + DL + ++I ++ + + LI+ N P+DP+ R
Sbjct: 28 FKAYNRSKLDDLPQLARLPPRMREQIGLVARVLPFKVNRYVVEQLIDWTNVPDDPLFRLT 87
Query: 61 IPQKEE--------------------------------LNILPEEREDPIGDNNHSPLKG 88
PQ + +N P ++ + + P G
Sbjct: 88 FPQPDMLAPDDLGELAMLSRDAARGADLDALIGRLRVRMNPHPADQRLNEPELDGEPCPG 147
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I H+Y +L H C YC FCFR +S + AY++ ++ +
Sbjct: 148 IQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLRAHGEVTD 207
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQC 199
++ TGGDP+++S RL++ L L ++HV +R ++ P R PEL+
Sbjct: 208 LLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPDTPELLAL 267
Query: 200 LK---EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILA 255
L+ +AG+ V + H NH E S E A++ L G+++ SQ +L+ INDD E+
Sbjct: 268 LRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHINDDAEVWR 327
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
V L I PYY+ +F L + I + +SGL + +
Sbjct: 328 RNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSARGPSMSA 387
Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340
G GKV++ ++ Y + +
Sbjct: 388 GPGKVEVA--GTLELQGQRYFLLNF 410
>gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
Length = 456
Score = 298 bits (765), Expect = 6e-79, Method: Composition-based stats.
Identities = 85/391 (21%), Positives = 155/391 (39%), Gaps = 52/391 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
L+ T+++ + L + +E E+ +++ + LI+ P+DP+
Sbjct: 18 LKSYTISNYKQLPQVQALSEEVRFEMDVVASVLPFKTNNYVVEQLIDWDRVPDDPMYVLT 77
Query: 61 IPQKEEL-------------NILPEERED-------------PIGD--------NNHSPL 86
PQK L N P+E D P G + + L
Sbjct: 78 FPQKNMLKKRHFDQVAQMIKNETPKEEMDKKINDVRMELNPHPAGQLELNVPSLKDGTKL 137
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E YI E +I
Sbjct: 138 YGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGEQLAQYIGEHPEI 197
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI--------NP 194
+V+FTGGDP+I+ K + + TL + ++ +R +++ P ++
Sbjct: 198 SDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPYKVLSDDDAAETL 257
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + + ++G + I H NHP E ++ +AI ++ G + +QS LL INDD +
Sbjct: 258 DTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQSPLLSHINDDADA 317
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ V L PYY+ +F +++ +I S ++SGL + +
Sbjct: 318 WVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRVSGLARTVKGPSM 377
Query: 314 PGGYGKVKIDTHNIKKVGNGS-YCITDHHNI 343
GKV I + I ++G + +
Sbjct: 378 SATPGKVLI--NGIPEIGGKKLFSLRFLQGR 406
>gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121
gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
SS14]
gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 355
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 9/317 (2%)
Query: 39 LTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
++P A+LI D + RQ +E + E DP+G++ + +VH+Y +R
Sbjct: 40 ISPAYAHLIAQAQGADAQALKRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANR 99
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L+ C +CR+CFRR + + G + + ++ E + Y++ + E++ +GGDPL
Sbjct: 100 VLMLATGRCFSHCRYCFRRGFIAQRAGWIPN-EEREKIITYLRATPSVKEILVSGGDPLT 158
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S ++ + + LR + I+R +R PQ PELI L+E KPV+I H NHP
Sbjct: 159 GSFAQVTSLFRALRSVAPDLIIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHP 217
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E A + AG+ + SQSVLL+G+ND E L L L +KP YL DL
Sbjct: 218 AELGSTQRAVLEACVGAGLPVQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDL 277
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-----VG 331
A GT FR+ + + + +LKE++SGL P +DLPGG GK + +++
Sbjct: 278 APGTGDFRVPLSDTLALWRTLKERLSGLSLPTLAVDLPGGGGKFPLVALALQQDVTWHQE 337
Query: 332 NGSYCITDHHNIVHDYP 348
++ + YP
Sbjct: 338 REAFSARGIDGAWYTYP 354
>gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa]
Length = 519
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 95/384 (24%), Positives = 168/384 (43%), Gaps = 69/384 (17%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQI-------------DEIKEI-----SNHYSIALTPV 42
Q+ + + + + E++ + IK++ + +I +TP
Sbjct: 149 WQVANTVQGTVKLFKFLQTVVPEEVPVDKLGMQMQSRDEFIKDVLDGVAAATMAIRMTPY 208
Query: 43 IANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
I + IN +P +DPIARQF+P K L P+ D + + SP+KG+ P R
Sbjct: 209 ILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKGLASLKPTR---- 264
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ E A AYI+ + ++ +++ +GGD L +
Sbjct: 265 ----------------------------RRWEEAFAYIESRPELQDIVVSGGDSYYLQPE 296
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIA 210
+L + + L + +++ RF S+ V P RI E + L K+AGK + +
Sbjct: 297 QLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALH 356
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R + I PYY
Sbjct: 357 THFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYY 416
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
++ DL H R ++ + A ++ I+G P +++DLPGG GK ++
Sbjct: 417 VYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGKRLACSYQSYDR 476
Query: 331 GNGSYCI-------TDHHNIVHDY 347
G D + V++Y
Sbjct: 477 DTGVSTFVAPAVTGRDKADKVYEY 500
>gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440]
gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 448
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 81/367 (22%), Positives = 149/367 (40%), Gaps = 45/367 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R +L + + + I+ IS + + + LI+ P+DPI R
Sbjct: 13 RFRSFGPHHIDELGARYGLSADNVRAIRTISRVLPFRVNEYVLSHLIDWDRIPDDPIFRL 72
Query: 60 FIPQKEEL-------------------------NILPEEREDPIGDNNHSP-------LK 87
PQ+ L I P G H+ L
Sbjct: 73 VFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNPHPSGQQQHNVPHLDGHELP 132
Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + +L C YC +CFR ++ E + Y+ +
Sbjct: 133 GMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPEQLVTYLHRHPAVT 192
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200
+V+ TGGDP+I+S +RL+ ++ L + V+ +RF ++ P R +L++
Sbjct: 193 DVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVAYWPYRFVSDSDADDLLRLF 252
Query: 201 KE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ AG+ V + H +HP E + E A AI+R+ + G ++ Q+ L++ +NDDP ++
Sbjct: 253 AQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVVYCQAPLIRYVNDDPHAWSD 312
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ R + L PYY+ +F++ + I + + + GL + +
Sbjct: 313 MWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTAYQDLPGLARTVRGPVMSAT 372
Query: 317 YGKVKID 323
GKV +D
Sbjct: 373 PGKVLVD 379
>gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380]
gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
Length = 442
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 86/385 (22%), Positives = 150/385 (38%), Gaps = 50/385 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M+ T + + E +K +S + + + LI+ P+DP+ R
Sbjct: 1 MEYHAYTPDHFDRIAELGCLSAEYRFGMKVVSQVLPFRVNRYVIDELIDWGKVPHDPMFR 60
Query: 59 QFIPQKEELNILPEER--------------------------EDPIGDN-------NHSP 85
P L ++ P G +
Sbjct: 61 LVFPDPGMLLPDDFKQIASLLASGADRQALDRAVHEIRLRLNPHPAGQQTLNVPCLDGHK 120
Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L G+ H+Y + +L C YC FCFR ++ + T Y++ S+
Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
+ +++ TGGDPL++ L + L+ L H+Q +R ++ P R +
Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240
Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
L + L + GK + + H NH E +E A AI R+ G + +QS ++ +NDDP+
Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
+ L +T V L + PYYL +F + +E +I +K+SGL +
Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337
+ G GKV+I + +VG +
Sbjct: 361 MSAGPGKVEI--QGVAEVGQEKVFV 383
>gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 455
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 82/384 (21%), Positives = 157/384 (40%), Gaps = 50/384 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+L+ TL + ++L + ++ E++ + N + LI+ +N PNDP+
Sbjct: 15 RLKSYTLANFRELPQIQKMGAKKQFEMEVVGNVLPFKTNNYVIEQLIDWNNIPNDPMFVL 74
Query: 60 FIPQKEELNILPEER-------------------------EDPIGD--------NNHSPL 86
PQ+ L + P G + + L
Sbjct: 75 TFPQRGMLIPEHYSKMESALKKGDKKEIQNTANEIRLQLNPHPAGQMELNVPTLKDGTKL 134
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E +I
Sbjct: 135 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLREHPEI 194
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELI 197
+V+FTGGDP+I+ K + L + +++ +R ++ P + E++
Sbjct: 195 SDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDDAEEML 254
Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
K G + + H NH E ++ AI ++ G + +QS LL+ INDD ++
Sbjct: 255 DIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHINDDADM 314
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V+L PYY+ +F +++ + Q+I +K++GL + +
Sbjct: 315 WAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTVRGPSM 374
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCI 337
GKV+I I +V + + +
Sbjct: 375 SATPGKVQIL--GITEVNDEKFMV 396
>gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A]
gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 492
Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats.
Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 51/336 (15%)
Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88
+ +I +TP I + IN +P +DPIARQF+P K L P+ D + + SP+KG
Sbjct: 170 AAATMAIRMTPYILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 229
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ P R + E A AYI+ + ++ +++
Sbjct: 230 LASLKPTR--------------------------------RRWEEAFAYIESRPELQDIV 257
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL----- 200
+GGD L ++L + + L + +++ RF S+ V P RI E + L
Sbjct: 258 VSGGDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISN 317
Query: 201 --KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
K+AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+
Sbjct: 318 KAKKAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLI 377
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
R + I PYY++ DL H R ++ + A ++ I+G P +++DLPGG G
Sbjct: 378 RQLADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGG 437
Query: 319 KVKIDTHNIKKVGNGSYCI-------TDHHNIVHDY 347
K ++ G D + V++Y
Sbjct: 438 KRLACSYQSYDRDTGVSTFVAPAVTGRDKADKVYEY 473
>gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
Length = 461
Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 52/370 (14%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
R T DL + E+ I+ ++ + + LI+ P+DPI R
Sbjct: 11 FRAYTAKHLDDLLLRAGLGDEERLRIRAVATVLPFRTNAYVVDQLIDWSAIPDDPIYRLV 70
Query: 61 IPQKEEL--------------------------------NILPEEREDP----IGDNNHS 84
PQ + L N P + D +G++
Sbjct: 71 FPQADMLPEPDVTRLAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGED--- 127
Query: 85 PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
P+ G+ H+YP+ +L C YC +CFR + +S D + + Y+++
Sbjct: 128 PMPGMQHKYPETVLFFPKQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHP 187
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
++ V+FTGGDP+I+S L++ L+ L ++ ++ +R ++ PQR +P+ L
Sbjct: 188 RVTSVLFTGGDPMIMSESVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTL 247
Query: 201 K------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ +AGK + H +HP E S A AA++ + G ++ +Q+ L++ INDDP
Sbjct: 248 RLFASVVDAGKNLAFMAHFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPAT 307
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+++ R + + + PYY+ +F + + +I +SGLC+ +
Sbjct: 308 WSSMWRRQLTMGMVPYYMFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSM 367
Query: 314 PGGYGKVKID 323
GKV +D
Sbjct: 368 SATPGKVCVD 377
>gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 316
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 85/276 (30%), Positives = 157/276 (56%), Gaps = 11/276 (3%)
Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
Q L+ + + S L + + +++ + ++E+ + + + +L+N ++ NDPI +
Sbjct: 17 WQSELK-QNINSIDSLKHYIDLSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRK 75
Query: 59 QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+P ++EL + + E +DP GD+ H+ G++H+YP L+ C +YCR CFR+
Sbjct: 76 LALPSEDELIVAGSMGETTKDPYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRK 135
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+VG + ++ + A YI+E +I VI +GGDPL+++ +R++K+L++L I HV
Sbjct: 136 AIVGLPNDKTV--ENFQRAATYIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHV 193
Query: 176 QILRFHSRVPIVDPQR-INPELIQCLKEAGKP--VYIAIHANHPYEFSEEAIAAISRLAN 232
+R +R P+V P R + +L++C +E K +Y+ H NH E + A A+ R+
Sbjct: 194 NYVRLGTRTPVVYPMRFFDDDLLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQ 253
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
G+ + +Q+VLL+G+ND + NLM V + KP
Sbjct: 254 TGVTVNNQAVLLEGVNDSASDIENLMNGLVTIWRKP 289
>gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL
15998]
gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL
11379]
gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
Length = 448
Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 76/370 (20%), Positives = 149/370 (40%), Gaps = 48/370 (12%)
Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL-- 67
++ + ++ ++ +S + + + LI+ H P DPI + PQ L
Sbjct: 23 DEVAARYGMSHSALETVRAVSRVLPFRVNDYVLSELIDWHRVPEDPIFQLVFPQHGMLRA 82
Query: 68 ------------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDR 96
N P + E + L+GI H+Y +
Sbjct: 83 EDEKLLVDLARARAPKREIAAEVRRIRAGLNPHPSGQMELNVPSLADDALEGIQHKYRET 142
Query: 97 ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+L C YC +CFR ++ E + Y++ + +V+FTGGDP
Sbjct: 143 VLYFPQQGQTCHSYCTYCFRWAQFIGDADLRFAAPGPERLVEYLRCHPAVSDVLFTGGDP 202
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
+++S +RL+ L+ + ++ V+ +R ++ PQR + L + + +G+
Sbjct: 203 MVMSTERLRSHLEPVLSVETVRTVRIGTKAVAYWPQRFVSDADADDLLRLFEQVVASGRT 262
Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + H +HP E + A A+ R+ G ++ Q+ L+ +NDD A L R +
Sbjct: 263 LAVMAHFSHPRELETATARRALGRVRATGAVVYCQAPLIAHVNDDARTWAELWRAELSAG 322
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
PYY+ +F + + +G +I + K+ GL + + GKV +D
Sbjct: 323 TVPYYMFVERDTGPRHYFEVPLTKGLEIFRTAYSKLPGLARTVRGPVMSATPGKVLVD-- 380
Query: 326 NIKKVGNGSY 335
+++ G +
Sbjct: 381 GVEETAEGRF 390
>gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
Length = 456
Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 83/372 (22%), Positives = 167/372 (44%), Gaps = 30/372 (8%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN-PND 54
Q +H T+ + ++L L+ + + ++ S+ + P + N +N + D
Sbjct: 51 WQRKH-TIKNLKELKATLGALLPDDLAESMERDQRERATMSLLVPPQMLNTMNLEDLWRD 109
Query: 55 PIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
P+ R +P + E P+ D + + + ++G+ HRYP ++L ++L CP YC
Sbjct: 110 PVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169
Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C R ++VG+ V L Y++ + +V+ +GGD L ++L+
Sbjct: 170 HCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPTVRDVVVSGGDIANLPIQQLE 229
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
+ +L I +++ +R S+ + PQ + L + E G + + H NH
Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289
Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273
+ + A+ +L G + +Q VLL+G+ND P+ L +L T ++ +I PYY +
Sbjct: 290 AQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQALLDLCFTLLDHAKILPYYFYM 349
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332
D+ + H+RL++ + Q++ + + G P + D+P GK + +
Sbjct: 350 CDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408
Query: 333 GSYCITDHHNIV 344
SY ++ +
Sbjct: 409 ISYWTKNYRTGI 420
>gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454]
gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI
454]
Length = 459
Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats.
Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 48/370 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ + T S Q + + + + +K IS + + LIN P+DPI R
Sbjct: 9 KFKPYTRQSIQQAHQWATLPENLREAVKVISRVLPFRTNQYVLDTLINWERVPDDPIYRL 68
Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSP-------L 86
P + L P G H+ +
Sbjct: 69 TFPHSDMLPADEYATLRDLVLIKQDEAAIENEVRKIRMRMNPHPAGQMTHNVPILDGKRM 128
Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C YC FCFR +G +K + +AY++ +++
Sbjct: 129 HGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNELVAYLRRHTEV 188
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195
+V+ TGGDPLI++ + L ++ L + H+Q +R ++ PQR +
Sbjct: 189 TDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRFVTDKDADDLL 248
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L + + AGK + + H NHP E + A A+ R+ ++G L QS L++ INDD +
Sbjct: 249 WLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPLIRHINDDAKA 308
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A L T V L PYY+ +F+L + + +I + + +SGL + +
Sbjct: 309 WAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSGLSRTVRGPSM 368
Query: 314 PGGYGKVKID 323
GKV +D
Sbjct: 369 SAFPGKVVVD 378
>gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
Length = 386
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 21/363 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND----PI 56
Q ++ +E I + +TP ANLI D P+
Sbjct: 24 WQQKNAIRDEPALRSACGGWSEEVAQHIANNLKDRKMQITPYYANLIRQAAYTDIVDNPL 83
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113
RQ +P + + + E + +H H+Y +R++L++++ C YC+FCF
Sbjct: 84 WRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143
Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R V S+K K + +L YI++ ++ EVI +GGDP++L+ +L + L +R I
Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVILSGGDPMMLTDAKLDECLGAIRNI 202
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ ++R HSR +P RI L+ L+ +H HP E S+ A+ R+
Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291
I+ S LL+G+ND+ E L +L + +KPYYL+H + G S ++ +I +
Sbjct: 262 VVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343
I+ LK ++S + P Y+ LP GK V + G Y T+
Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSGVEEMPQFEDIDGRRFYRFTNWQGD 379
Query: 344 VHD 346
V
Sbjct: 380 VCR 382
>gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
Length = 438
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 76/380 (20%), Positives = 149/380 (39%), Gaps = 48/380 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIARQ 59
+ R D+ + + D I +++ + + + LI+ +P DPI R
Sbjct: 13 RFRAFGPRQIDDIARRYGLSPKIRDGIALLAHVLPFRVNEYVLDQLIDWTDPAQDPIFRL 72
Query: 60 FIPQKEEL--------------------------NILPEEREDPIGDNNHSP-------L 86
PQ+ L I P G ++ L
Sbjct: 73 VFPQRGMLPEDDERSLESLVRSGAAKREMAAEVARIRAGLNPHPSGQREYNVPVHEGERL 132
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L C +C +CFR ++ + ++Y+ + ++
Sbjct: 133 AGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDPSLRFAAPGPDRLVSYLHDHPEV 192
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
+V+ TGGDP+++S +RL L+ L ++ V +R ++ PQR + L
Sbjct: 193 SDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGTKSLAYWPQRFVSDADADSLLRL 252
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ + GK V + H HP E + A+ R+ G ++ Q+ ++ INDD E A
Sbjct: 253 FERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRATGAVVYCQAPMVAHINDDAETWA 312
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
++ ++ + L PYY+ +F++ + +I + + GL + +
Sbjct: 313 SMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEIFHTAYRTLPGLARTVRGPVMST 372
Query: 316 GYGKVKIDTHNIKKVGNGSY 335
GKV +D ++ +G Y
Sbjct: 373 TPGKVVVD--GVETLGGDRY 390
>gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
Length = 487
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 41/342 (11%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPIARQFIPQKEELNIL 70
L K+ I++ + + +TP + + I+ +NP +DPI +QFIP +
Sbjct: 61 LLRKITHKEAFIEDAVAATKLAPMAIRITPHVLSRIDWNNPLDDPIRKQFIPLASCIIPD 120
Query: 71 PEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
E + D + + S +YCRFC R VG TV
Sbjct: 121 HEHLKLDSLEEEKDS----------------------LYCRFCTRSYAVGGGTDTVTKRP 158
Query: 130 D------TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
E Y++ + +++ +GGD L + L ++ + L ++ +++ +RF S+
Sbjct: 159 QKPSLTRWEKVFEYVENCKDLKDIVVSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASK 218
Query: 184 VPIVDPQRINP---------ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V P RI EL + GK V + H NHP E + A + L G
Sbjct: 219 GLAVAPGRICEGDPWTEALIELSNLGRSLGKQVCLHTHINHPREITWVTKTAANYLFKHG 278
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
+I+ +QSVLLKG+N+DP I+++L++ + I+PYY++ D+ G R ++E +
Sbjct: 279 VIVRNQSVLLKGVNNDPVIMSDLIQGLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLD 338
Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
L+ +SG P +++DLPGG GK + T + G +Y
Sbjct: 339 KQLRGTLSGFMMPAFVIDLPGGGGKRLVSTMESYENGVATYR 380
>gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_APKG8I13]
Length = 449
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 79/386 (20%), Positives = 147/386 (38%), Gaps = 51/386 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
++ TL + + + + KE E++ + N + LI+ N PNDP+
Sbjct: 16 IKSYTLMNFRIIPQIQQMSKEDQFEMEVVGNVLPFKTNNYVVEQLIDWDNVPNDPMYVLT 75
Query: 61 IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86
PQK L ++ P G + + L
Sbjct: 76 FPQKGMLIPEHYDKMASTLSSGADKKEVQRVANDIRLQLNPHPAGQMELNVPQLRDGTKL 135
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E +I
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEI 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+FTGGDP+I+ L + +++ +R ++ P + +
Sbjct: 196 SDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + E+G + I H NH E ++ A+ R+ G + +QS LL INDD ++
Sbjct: 256 KNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHINDDTDM 315
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V L PYY+ +F + + + +KI ++SGL + +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTVRGPSM 375
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
GKV + + ++ +
Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399
>gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 468
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 48/358 (13%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
+ + + + ++ ++ + + LI+ +N P DP+ + PQ L
Sbjct: 23 IPQLQRLPADTLLAMRAVAAVLPFRVNQYVVEELIDWNNLPADPMFQLTFPQPGMLAEAD 82
Query: 68 ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98
N P + E + + PL G+ H+Y D +L
Sbjct: 83 LAKMMRLLADGADQPTIERAARQIQRRLNPHPAGQMELNVPYFDGQPLSGMQHKYRDTVL 142
Query: 99 LKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
C YC +CFR +S+ E+ +AY++E ++ V+FTGGDPL+
Sbjct: 143 FFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLKEHPEVSNVLFTGGDPLV 202
Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
+ L++ ++ L ++H+ +R ++ P P R E L ++ AG+
Sbjct: 203 MRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPDSDDLLRLFDQVRAAGRH 262
Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ I H + P E + A AA+ R+ + G I+ Q+ L++ +NDD + A+L R V L
Sbjct: 263 MAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVNDDADTWADLWRLQVRLG 322
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
PYY+ +F + + +I ++SGL + + GKV ID
Sbjct: 323 AVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTVRGPSMSATPGKVIID 380
>gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine
crenarchaeote HF4000_ANIW133C7]
Length = 447
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 79/386 (20%), Positives = 148/386 (38%), Gaps = 51/386 (13%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
++ TL + + + + +E E++ + N + LI+ N PNDP+
Sbjct: 16 IKTYTLINFRKIPQIQQMPEEVQFEMEVVGNVLPFKTNNYVVEQLIDWDNIPNDPMYVLT 75
Query: 61 IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86
PQK L ++ P G + + L
Sbjct: 76 FPQKGMLIPEHYDKMASTLRSGADKKEIARVANDIRLQLNPHPAGQMELNVPQLKDGTKL 135
Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + L C YC FCFR + ++ E + Y++E ++
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEV 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
+V+FTGGDP+I+ TL + +++ +R ++ P + +
Sbjct: 196 TDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255
Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ + ++G + I H NH E ++ AI R+ G + +QS LL INDD +
Sbjct: 256 KNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHINDDSSM 315
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
A + + V L PYY+ +F + + + +KI S ++SGL + +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTVRGPSM 375
Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
GKV + + ++ +
Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399
>gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2]
gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2]
Length = 440
Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats.
Identities = 86/370 (23%), Positives = 148/370 (40%), Gaps = 48/370 (12%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
M+ + T + + L N + EQI I+ + + N LIN + NDP+
Sbjct: 1 MRYKPYTNKNLKSLPQFNRLTPEQIFNIQVVGTVLPFKTNNYVVNELINWDDFENDPMFI 60
Query: 59 QFIPQKEEL--------------------------------NILPEERED-PIGDNNHSP 85
PQ+E L N P + D + +
Sbjct: 61 LNFPQREMLAKKHFNTMAALVKANASKERITMAANRIRHSLNPHPAGQIDKNVPVLDGQR 120
Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
L GI H+Y + +L C +C FCFR G + KD + + Y++ + +
Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP------- 194
+ +++FTGGDPL +S K L L + + ++ +R ++ P R
Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240
Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
EL + + +AG + I H NHP E + E A+ + G ++ SQS +L IN +
Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I + + + + L I PYY+ +F + + + KI +SG+ +
Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360
Query: 313 LPGGYGKVKI 322
+ GK+KI
Sbjct: 361 MSASPGKIKI 370
>gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110]
gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110]
Length = 499
Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 40 TPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
T + I D + P E D G+++++ + G+ H+Y LL
Sbjct: 175 TNFYRDQITNSGYYDQLKYIVEPTIAEFKSPG--SLDTSGEHDNTVVPGLQHKYAQTGLL 232
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C YCR+CFR+ +VG + D YI ++ V+ +GGDP +LS
Sbjct: 233 LVTDRCASYCRYCFRKRIVGKDSDEIAP--DFARVAQYIAGHPEMTNVLLSGGDPFVLST 290
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NPELIQCLKEAGKPVYIAIHANH 215
+L K+L L I H++ +RF +++ P+R P L + + EAGK I H +H
Sbjct: 291 AKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDH 350
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E S +A I L G+ L+QSVLL +NDDPEILA ++ ++PYYL
Sbjct: 351 IGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGR 410
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGS 334
G SHF++++ G +I + ++SG+ + YI + GK+++ + +G
Sbjct: 411 PVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI--MSHYTGKIEV----LDLGADGR 464
Query: 335 YCITDHHNIV 344
+ H N +
Sbjct: 465 VYMRYHQNKI 474
>gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus]
Length = 445
Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 89/395 (22%), Positives = 162/395 (41%), Gaps = 49/395 (12%)
Query: 1 MQLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54
Q R + +A+ L + + D++ E H + + +TP + N I P P D
Sbjct: 24 WQ-RAHCVKNARQLRAVVGDGLDDKFYDDLTEDQEHMATMAMLITPQMLNTIAPETPADS 82
Query: 55 ----------PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
P+ R +P + + P D + + ++G+ RYP ++L +
Sbjct: 83 DGYHDAFYADPVRRYMVPVRSDRDLRWPSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAE 142
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
L+ CP YC C R ++VG +V + EA L +++ + +V+ +GGD
Sbjct: 143 LVATCPQYCGHCTRMDLVGGSTPSVDKQRLTLRPADRQEAILDHLRRTPGVRDVVVSGGD 202
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
+ RL+ L L I V+ +R S+ + PQ P+++ L G
Sbjct: 203 VANVPWPRLESFLLRLLEIDSVRDIRLASKALVGLPQHWLQPQVVSGLENVAGVAARRGV 262
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE- 263
+ + HANH + L +AG+ + +Q VL++G+ND L +L +
Sbjct: 263 HLAVHTHANHVQSVTPLVAEGARALLDAGVRDVRNQGVLMRGVNDSTAALLDLCFALQDE 322
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY + D+ G H+R ++ E Q + ++ + G P + D+P GK +
Sbjct: 323 AGILPYYFYMCDMVPGAEHWRTSLAEAQDLQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 381
Query: 324 --THNIKKVGNGSYC--------ITDHHNIVHDYP 348
++ G + + D + YP
Sbjct: 382 QAVEYDRERGISYWTKNYRTAIELDDPDALTRRYP 416
>gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1]
gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 456
Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 30/372 (8%)
Query: 1 MQLRHKTLTSAQDLYNA-NLIKKEQI----DEIKEISNHYSIALTPVIANLINPHN-PND 54
Q +H T+ + ++L A + E++ + ++ S+ L P + N +N + D
Sbjct: 51 WQRKH-TVKNLRELRAALGPLLPEELAVSIERDQKERATMSVLLPPQMLNTMNLEDLWGD 109
Query: 55 PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
P+ R +P + P D + + ++G+ HRYP ++L ++L CP YC
Sbjct: 110 PVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169
Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C R ++VG+ V + E L Y++ + +V+ +GGD L ++L+
Sbjct: 170 HCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPSVRDVVVSGGDIANLPIQQLE 229
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
+ +L I +++ +R S+ + PQ + L + E G + + H NH
Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289
Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273
+ + A+ +L + G + +Q VLL+G+ND L +L T ++ +I PYY +
Sbjct: 290 ARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPALLDLCFTLLDHAKILPYYFYM 349
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332
D+ + H+RL++ + Q + + + G P + D+P GK + +
Sbjct: 350 CDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408
Query: 333 GSYCITDHHNIV 344
SY ++ +
Sbjct: 409 ISYWTKNYRTGI 420
>gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
MBIC11017]
Length = 379
Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
+ +E D I H+ + A LI+ +P DP+ + +P E + D
Sbjct: 29 LPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDDHG--SLDT 86
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
G+ + + G+ H+Y +L + C +CR+CFRR ++ T + +D + A+AY
Sbjct: 87 SGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAY 146
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--PE 195
IQ +I V+ +GGDP++ S +RL +L L I H+ +R +++P P R PE
Sbjct: 147 IQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPE 206
Query: 196 LIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
L+Q L + + H +HP E + A A++ L NAG +L +Q L++G+N ++
Sbjct: 207 LLQVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDV 266
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
+ L + L + P YL HP HF+L I EG K+V L+++ +G + L
Sbjct: 267 METLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNG-SVKRFRYIL 325
Query: 314 PGGYGKVKI 322
+GK+++
Sbjct: 326 THEHGKLEL 334
>gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C5]
Length = 594
Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 30/359 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP---NDPI 56
+ + +T + L + + + +I IK+ N +TP +L++ + + I
Sbjct: 195 WHMEN-NITDLETLQDLLDLSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAI 253
Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
Q IP ++ E R D +G+N+ SP+ + RYP ++K C C +
Sbjct: 254 RAQVIPPTRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313
Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
C R + K + + A+ + + I EV+ TGGDP +L + L +L
Sbjct: 314 CQRNWQIKDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEF 373
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
IKHV+ +R +R+P+V PQRI ++ L + +P + ++ H H YE +++
Sbjct: 374 SQIKHVERIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQE 433
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+S+L N G+ + +Q V + E + L + + I PYYL + T +R+
Sbjct: 434 AVSKLKNKGMSVYNQQVFTVENSRRFET-SALRKVLKLIGIDPYYLFNTKGKDETIDYRV 492
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
I + + + G C + N+ K+G + H+++
Sbjct: 493 PIARALQERSEEARLLPGYC-------------RTDCTVFNVPKLGKNNLNYCQDHDLI 538
>gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
Length = 456
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 33/372 (8%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN---- 51
Q R + + + L LI + ++ + +TP + N ++
Sbjct: 46 WQ-RAHCVKNIRQLQQVLGDLIDESFYADLHRDQTGHATMPMLVTPQMLNTMDTSTTEAF 104
Query: 52 PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
DP+ R +P + P D + + + ++G+ HRYP ++L +LL CP
Sbjct: 105 YADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLTHRYPTKVLAELLSTCPQ 164
Query: 108 YCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
YC C R ++VG+ V + EA L Y++ + +V+ +GGD L
Sbjct: 165 YCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPTVRDVVVSGGDVANLPWP 224
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIH 212
RL+ + L I ++ +R ++ + PQ + L + G + + H
Sbjct: 225 RLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMERLAAKARRRGVALAVHTH 284
Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYY 270
N + A L AG+ + +Q VLL G+ND P L +L ++ +I PYY
Sbjct: 285 VNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAALLDLSFALLDEAQIMPYY 344
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKK 329
L+ D+ G+ H+RL + Q++ ++ + G P + D+P GK + + +
Sbjct: 345 LYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDVP-YVGKRWVHQPADYDR 403
Query: 330 VGNGSYCITDHH 341
+ SY ++
Sbjct: 404 LRGISYWTKNYR 415
>gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens]
Length = 1879
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 51/347 (14%)
Query: 22 KEQIDEIKEISNHYSIALTPVIAN-LINPH---NPN-DPIARQFIPQKEELNILPEERED 76
+E + ++K + + +P + + LI+ + DP + P + L+ E D
Sbjct: 793 QENMQDVKRAALIFPFKASPYLVDELIDWDMEADIRTDPFYKLVFPTMDMLSDEHRELLD 852
Query: 77 PIGDNNH---------------SPLK---------------GIVHRYPDRILLKLL--HV 104
+ D +P G+ H+Y + +L
Sbjct: 853 GVCDAGDPAAIKEAVEEIRESLNPHPAGQKALNAPKKAELTGVQHKYAETVLFFAAAAQT 912
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C YC +CFR + KD ++ Y++E ++ +++FTGGDP+I+ + L++
Sbjct: 913 CHAYCTYCFRWAQFIGDPDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQ 972
Query: 165 VLKTLRY---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE----AGKPVYIAIH 212
L+ + + H++ LR +R PQR EL+ L+E G+ + I H
Sbjct: 973 YLEPFKDPTHLPHIKNLRIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAH 1032
Query: 213 ANHPYEF-SEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
H E +++ AI RL G +I+ SQS +++GINDD ++ A R V L + PYY
Sbjct: 1033 LGHVRELSTDKVKHAIHRLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYY 1092
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+ S+F + + Q++ A SGLC+ +
Sbjct: 1093 MFIARDTGAQSYFDVPLVRAQRLYADAIRATSGLCRTARGPSMSCTP 1139
>gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus]
Length = 448
Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats.
Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 39/382 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54
Q R + + + L L+ + D++ ++ + L P + N + P D
Sbjct: 37 WQ-RVHCVRNTRQLRAVVGDLLDERFYDDLAADQESFATMSMLLPPQMLNTMVPEGAADF 95
Query: 55 -------PIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
P+ R +P + E P D + + ++G+ HRYP ++L +L+
Sbjct: 96 TGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEMWVVEGLTHRYPTKVLAELVS 155
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG+ V K + L Y++ + +V+ +GGD
Sbjct: 156 TCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLDYLRRTPAVRDVVVSGGDVAN 215
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVY 208
+ +L+ L L I+ V+ +R ++ PQ + + G +
Sbjct: 216 VPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQVVEGMSRVARTAASRGVNLA 275
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRI 266
+ H NH + A L +AG+ + +Q VL++G+N P+ L L E I
Sbjct: 276 VHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGVNATPDDLLELCFALQGEANI 335
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324
PYY + D+ H+R ++ E Q + A++ + G P + D+P GK +
Sbjct: 336 LPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYATPRIVCDVP-YVGKRWVHQVV 394
Query: 325 HNIKKVGNGSYCITDHHNIVHD 346
+++G SY ++ +
Sbjct: 395 EYDRELGV-SYWTKNYRTGIES 415
>gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
Ech586]
Length = 386
Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 21/363 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP----NDPI 56
Q ++ E I + +TP ANLI ++P+
Sbjct: 24 WQQKNAIRDEPALRAACGGWSDEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPL 83
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113
RQ +P + + E + +H H+Y +R++L++++ C YC+FCF
Sbjct: 84 WRQVVPFWLDDGATGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143
Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
R V S+K K + +L YI+ + EVI +GGDP++L+ +L + L +R I
Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNI 202
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ ++R HSR +P RI L+ L+ +H HP E S+ A+ R+
Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILRRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291
I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +I +
Sbjct: 262 VVPIVFSNMPLLRGVNDNEDTLRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343
I+ LK ++S + P Y+ LP GK V + G Y T+
Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSSVQDMPQFEDIDGERFYRFTNWQGD 379
Query: 344 VHD 346
V
Sbjct: 380 VCR 382
>gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5]
gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5]
Length = 468
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 81/380 (21%), Positives = 156/380 (41%), Gaps = 36/380 (9%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
Q R + + + L ++ ++ ++ S+ + P + N + PH P
Sbjct: 58 WQ-RVNCVKNIKQLRAVLGDTVDETFYADLEADQKALATMSMLVPPQMLNTMVPHQPMST 116
Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DPI R IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ V K +A + Y++ + +V+ +GGD +
Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 236
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209
+ L+ L L I+ ++ +R ++ + PQ P++++ L G + I
Sbjct: 237 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
H NH + A + G+ + +Q VL++G+N L +L E I
Sbjct: 297 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSADLLDLCFALQGEAGIL 356
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
PYY + D+ H+R+ + Q++ + + G P + D+P GK + +
Sbjct: 357 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTD 415
Query: 327 IKKVGNGSYCITDHHNIVHD 346
+ SY ++ +
Sbjct: 416 YDRERGISYWTKNYRTSIES 435
>gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
11293]
Length = 461
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 77/386 (19%), Positives = 151/386 (39%), Gaps = 52/386 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R + + + + K Q+ E++ ++ + LI+ P DP+ +
Sbjct: 5 RFRPYSAANIDSITQLKRLPKSQLREMQAVAKILPFRTNNYVVEELIDWSRIPEDPLFQL 64
Query: 60 FIPQKEE----------------------------------LNILPEERED-PIGDNNHS 84
PQ + +N P + + +
Sbjct: 65 TFPQPQMLHKSDLRRITELLATETGYSPEQLKSEQYRIRTAMNPHPAGQLQLNVPEEEGE 124
Query: 85 PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
L G+ H+Y + +L C YC +CFR K ++S + E + Y+
Sbjct: 125 VLHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHP 184
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPE----- 195
++ +++ TGGDP+ + L++ ++ L + ++Q +R ++ P R +
Sbjct: 185 EVSDLLITGGDPMFMRSSVLRRYIEPLLRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSDD 244
Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
L + AG + I H H E + AAI R+ G I+ QS +++ INDD
Sbjct: 245 LISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDDA 304
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ A + R V+L + PYY+ ++F + I E K+ + ++SGL +
Sbjct: 305 SMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRGP 364
Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCI 337
+ GK+ +D I ++ Y +
Sbjct: 365 SMSAKPGKILVD--GITEIEGEKYFV 388
>gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
maripaludis C7]
Length = 594
Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 30/359 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH---NPNDPI 56
QL + + S + L N + + + I++ N+ +TP +L++ + +
Sbjct: 195 WQLENVVINS-KTLENLVALSVSEKNAIEKARQNNIPFGITPYYVSLMDNTTDRKYDHAV 253
Query: 57 ARQFIPQKEELNILP-----EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
Q IP + E D +G+ + SP+ + RYP ++K C C +
Sbjct: 254 RAQVIPPLNYVEKTAEARNSGESLDFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313
Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
C R + K + + E A+ + + I EV+ TGGDP ILS + L +L
Sbjct: 314 CQRNWQIKDVFSKNALAKKESVENAIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEF 373
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
IKH++ +R +R P+V PQRI E + L +P V ++ H H YE +++
Sbjct: 374 SEIKHLERIRIGTRTPVVLPQRITDEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKD 433
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+S+L N GI + +Q V + E + L + + I+PYYL + T ++R+
Sbjct: 434 AVSKLKNNGIYVYNQQVFTVENSRRFET-SALRKALKLVGIEPYYLFNTKGKEETVNYRV 492
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
I + + G C + N+ K+G + H+++
Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDLI 538
>gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054]
gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia
cenocepacia HI2424]
gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054]
gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424]
Length = 396
Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/366 (26%), Positives = 162/366 (44%), Gaps = 24/366 (6%)
Query: 1 MQLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLI-------NPHNP 52
Q R+ T+ L A E I+ N + +TP LI +
Sbjct: 31 WQQRN-TIREEASLREACGGWSDELSSHIQSNLNGRKLQITPYYLRLIRESQGDTDADIV 89
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRF 111
+P+ RQ +P + + + E + H H+Y +R++L++++ C YC+F
Sbjct: 90 RNPLWRQVVPFWSDEIVGGYDGESENWELAHEMKTPICQHKYDNRVILRMVNTCNSYCQF 149
Query: 112 CFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
CF R + + + T S ++AYI++ I EVI +GGDPL+LS +L + L L
Sbjct: 150 CFEALRTLEVNSEKTNASRDTFGESVAYIKQNPAIEEVILSGGDPLMLSDAKLDEHLSAL 209
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
R + ++R HSR +P R+ +L+ L+ +H HP E S A+ R
Sbjct: 210 RDVGRDLLIRIHSRSLTFNPYRVTDQLVAMLERHRVN-AFGVHVCHPDELSPAFTDAVKR 268
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIE 288
+ +A I+ S L+GINDD E L L +KPYYL+H + G S ++ +I
Sbjct: 269 IRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGVKPYYLYHFMPFSPGASVYKASIR 328
Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKID------THNIKKVGNGSYCITDH 340
+ +I+ LK ++S + P Y+ LP GK V + ++ Y +
Sbjct: 329 DAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTVPLFEGQGDIPQFVETGEQRIYRFVNW 386
Query: 341 HNIVHD 346
D
Sbjct: 387 QGETCD 392
>gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 460
Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats.
Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 46/367 (12%)
Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
L+ L L I + +++ + + + + LI+ P+ DP R
Sbjct: 29 LKLYGLQHIDILRRYRDIPDRALHDMRVVGQVLPFRVNNYVLDELIDWAEPDEDPFYRLT 88
Query: 61 IPQKEEL------------------------------NILPE-EREDPIGDNNHSPLKGI 89
+ + L N P + + + S + G+
Sbjct: 89 MLDRHMLDPADFDALERALRVGGSAPVEVTAAIHRRFNPHPGRQMTMNMPELGGSGVSGL 148
Query: 90 VHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
H+Y + L+ C YC FCFR + +++ +++ +AYI+E +I +V
Sbjct: 149 QHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKEHKEISDV 208
Query: 148 IFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELI-------- 197
+ TGGDPLI+ L++ L L + HV +R +++ P R +
Sbjct: 209 LLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDADDLIALL 268
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +G+ + I +H +HP E + A A+ RL + G +L SQS +++G+NDD I
Sbjct: 269 EEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVNDDARIWQE 328
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
L V I PYY+ + F + + +I ++SGL + +
Sbjct: 329 LWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSARGPIMSTD 388
Query: 317 YGKVKID 323
GKV +D
Sbjct: 389 MGKVAVD 395
>gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
17836]
Length = 490
Score = 281 bits (721), Expect = 8e-74, Method: Composition-based stats.
Identities = 79/386 (20%), Positives = 168/386 (43%), Gaps = 37/386 (9%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPHNPND- 54
Q R + + + L + L+++ +++ + S+ L P + N I P D
Sbjct: 54 WQ-RSHCVKNVKQLRDVMGDLLEERVYEDLTRDQAERATMSMLLPPQMLNTIVPQGAADY 112
Query: 55 -------PIARQFIPQ----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
P+ R +P + + P D + ++ +G+ HRYP ++L ++L
Sbjct: 113 TEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEMWATEGLTHRYPTKVLAEVLP 172
Query: 104 VCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
CP YC C R ++VG+ T+ + + L Y++ + +V+ +GGD
Sbjct: 173 TCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLDYLRRTPGVRDVVVSGGDVAN 232
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ--------CLKEAGKPVY 208
+ RL+ L +L I++++ +R ++ + PQ + ++ ++ G V
Sbjct: 233 MPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDDVRAGVERVATIARQRGVMVA 292
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRI 266
+ H N + A + +AG+ + +Q VL++G+ND L +L ++ I
Sbjct: 293 MHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGVNDSVPQLLDLCFALLDGATI 352
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325
PYY + D+ + H+R+++++ Q + + + G P + D+P GK +
Sbjct: 353 TPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFATPRIVCDVP-YVGKRWVHQLS 411
Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKS 351
+ +V SY ++ + P++
Sbjct: 412 DYDEVRGISYWKKNYRTGIEQQDPEA 437
>gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
Length = 480
Score = 281 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 48/361 (13%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEEL 67
+ +L + + EI ++ + NLI+ P+DPI + PQ+ L
Sbjct: 22 NLSELPEWQRLDAQLRREIDIVARVLPFRTNRYVVENLIDWSRVPDDPIFQLVFPQRGML 81
Query: 68 NILPEEREDPIGDNNH---------------------------------SPLKGIVHRYP 94
+ + + + +++ PL G+ H+Y
Sbjct: 82 SEVDFDDVRTLVESSDDSEALARAVERIRRRLNPHPGGQLTHNTATLAGRPLPGVQHKYR 141
Query: 95 DRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ ++ C YC +CFR +G + ++ T +AY++ +I +V+ TGG
Sbjct: 142 ETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMRIETRSTSELVAYLRAHPEITDVLITGG 201
Query: 153 DPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
DP+I++ + L++ ++ L + H+Q +R ++ P R + L + +
Sbjct: 202 DPMIMATRTLRRYIEPLLVPELSHIQNIRIGTKSVAYWPHRFVSDADADDCLRLFEEVAA 261
Query: 203 AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
A + + I H HP E A AI R+ + G + Q+ L++ +ND PE+ + L RT
Sbjct: 262 ANRHLAIMGHYTHPVELHPALAREAIRRIRDTGAQIRMQAPLIRHVNDAPELWSELWRTG 321
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
V L + PYY+ +F + + +I +SGL + + GK++
Sbjct: 322 VRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIFRRAAANVSGLARAAQGPTMSVLPGKIR 381
Query: 322 I 322
I
Sbjct: 382 I 382
>gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
Length = 460
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 72/358 (20%), Positives = 149/358 (41%), Gaps = 48/358 (13%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
+ + + +I +S+ + + + LI+ P+DPI R P K+ L
Sbjct: 44 IPQVRSLGPDIRRDISVVSSVLPFKVNNYVVDELIDWSAVPDDPIFRLTFPHKDMLPADM 103
Query: 68 ----------------------------NILPEER-EDPIGDNNHSPLKGIVHRYPDRIL 98
N P ++ + + ++G+ H+Y + +L
Sbjct: 104 YDEVAALQARGLRPAELRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVL 163
Query: 99 LKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ H C YC +CFR G D + + Y++ ++ +V+FTGGDP+I
Sbjct: 164 VFPSHGQTCHAYCGYCFRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMI 223
Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE---AGKP 206
++ L++ ++ L +H++ RF ++ P R +L++ ++ +G+
Sbjct: 224 MTTDVLRQYVEPLLGPGFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRH 283
Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
V + H +H E ++ A+ R+ + G ++ Q+ +++ +ND+ A + R V L
Sbjct: 284 VAVMAHFSHARELGTDAVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLG 343
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
PYY+ +F L + + I +++SGL + + GKV +D
Sbjct: 344 AVPYYMFVERDTGAREYFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401
>gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f]
gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f]
Length = 457
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 76/372 (20%), Positives = 153/372 (41%), Gaps = 52/372 (13%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
L A L +++ + ++ + + + LI+ P+DPI R PQ + L
Sbjct: 28 LERAGLAGPDRL-MARAVAAVLPFRVNDYVVDALIDWDAAPDDPIYRLVFPQPDMLPAEQ 86
Query: 68 ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98
N P +RE + + + L G+ H+YP+ +L
Sbjct: 87 VAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRELNVPELAGTRLDGLQHKYPETVL 146
Query: 99 LKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
C YC +CFR + ++S++ + + Y++ ++ +V+ TGGDP++
Sbjct: 147 YFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDDLVTYVRAHPEVTDVLITGGDPMV 206
Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGK 205
+S + L + + L H+Q +R ++ P R L + + +G+
Sbjct: 207 MSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPARFVTDPGADDTLRLFERVVASGR 266
Query: 206 PVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ + H +HP E + A+ R+ + G ++ +Q +++ +NDD A + + V L
Sbjct: 267 SLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQGPVIRSVNDDAGAWAAMWQRQVRL 326
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
+ PYY+ +F + + +I ++ +SGL + + GKV +D
Sbjct: 327 GMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSVSGLARTVRGPVMSATPGKVVVD- 385
Query: 325 HNIKKVGNGSYC 336
+ VG Y
Sbjct: 386 -GVHTVGAEKYI 396
>gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
Length = 456
Score = 280 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 90/390 (23%), Positives = 170/390 (43%), Gaps = 42/390 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52
Q R + +A+ L L+++ D++ + S+ L P + N + P +P
Sbjct: 42 WQ-RVHCVRNAKQLRALMGDLLEERFYDDLLADQRELATMSMLLPPQMLNTMAPTAGTDP 100
Query: 53 N--------DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
DPI R +P + + P D + + ++G+ HRYP ++L +
Sbjct: 101 AKVTEAFYADPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAE 160
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
++ CP YC C R ++VG+ TV K +A +AY+++ + +V+ +GGD
Sbjct: 161 MISTCPQYCGHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGD 220
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
+ +L+ L L I V+ +R ++ PQ P++++ L + G
Sbjct: 221 VANVPWPQLESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGV 280
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
+ I H NH + A N G+ + +Q VL++G+N P L +L E
Sbjct: 281 NLAIHTHVNHAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGE 340
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY + D+ H+R+++ E Q++ S+ + G P + D+P GK +
Sbjct: 341 ANILPYYFYMCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWVH 399
Query: 324 --THNIKKVGNGSYCITDHHNIVHDYPPKS 351
+++G SY ++ + P++
Sbjct: 400 QLAEYDRELGI-SYWTKNYRTGIEHSDPEA 428
>gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
Length = 467
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
Q R + + + L ++ ++ + S+ + P + N + P P
Sbjct: 57 WQ-RVNCVKNVKQLRTVLGDTVDESFYADLEADQRAMATMSMLVPPQMINTMVPFAPPST 115
Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DPI R IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 116 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLAT 175
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ V K +A + Y++ + +V+ +GGD +
Sbjct: 176 CPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209
+ L+ L L I+ ++ +R ++ + PQ P++++ L G + I
Sbjct: 236 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 295
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
H NH + A + G+ + +Q VL++G+N + L +L E I
Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSKDLLDLCFGLQGEAGIL 355
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
PYY + D+ H+R+ + Q++ + + G P + D+P GK +
Sbjct: 356 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMVTE 414
Query: 327 IKKVGNGSYCITDHH 341
+ SY ++
Sbjct: 415 YDRERGISYWTKNYR 429
>gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 450
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 45/367 (12%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
+ R ++ + + ++ ++ IS + + + LI+ PNDPI +
Sbjct: 13 RFRSLGPHHVDEVAARYAPRADLMEAVRVISQVLPFRVNEYVLSHLIDWARVPNDPIFQL 72
Query: 60 FIPQKEELNILPE-ERED------------------------PIGDN-------NHSPLK 87
PQ+ L E E D P G + L
Sbjct: 73 VFPQRGMLAEDDERELADLLRAKDKRGLRLAVERVRGGLNPHPAGQKELNVPMLDGEVLP 132
Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
G+ H+Y + L C YC +CFR ++ E + Y+++ +
Sbjct: 133 GVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPAVT 192
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
+V+ TGGDP+I+S +RL+ L+ L + V+ +R ++ P R + L
Sbjct: 193 DVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLRLF 252
Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + +G+ + + H +HP E +++A AA++R+ G ++ Q+ L+K +NDD + A+
Sbjct: 253 ERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVWAD 312
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
+ R + + PYY+ +F++ + I + GL + +
Sbjct: 313 MWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMSAT 372
Query: 317 YGKVKID 323
GKV +D
Sbjct: 373 PGKVLVD 379
>gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
Length = 195
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 104/190 (54%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR HSR+PIV P RI
Sbjct: 1 MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L + + V + H NH E E AA++ L AG+ LL+QSVLL+G+ND+ + L
Sbjct: 61 TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A+L + + PYYLH D G +HF ++ +E ++I+ L ISG P ++
Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180
Query: 315 GGYGKVKIDT 324
G K +D
Sbjct: 181 GEPSKTPLDL 190
>gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
Length = 491
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 38/376 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51
Q + + + + L L+ + ++ ++ S+ +TP + N + P
Sbjct: 81 WQRTN-CVKNIKQLRTVLGDLVSETFYADLEADQKALATMSMLVTPQMLNTMVPFESMST 139
Query: 52 ---PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DPI R IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 140 DALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 199
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ + K +A ++Y++ + +V+ +GGD +
Sbjct: 200 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISYLKAHPGVRDVVVSGGDVANV 259
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209
K L+ L L I V+ +R ++ + PQ ++++ L G + I
Sbjct: 260 PWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 319
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
H NH + A + G+ + +Q VL++G+N L +L E I
Sbjct: 320 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 379
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--TH 325
PYY + D+ H+R+ + Q++ + + G P + D+P GK + T
Sbjct: 380 PYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 438
Query: 326 NIKKVGNGSYCITDHH 341
++ G SY ++
Sbjct: 439 YDQERGI-SYWTKNYR 453
>gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5]
Length = 198
Score = 279 bits (715), Expect = 4e-73, Method: Composition-based stats.
Identities = 117/198 (59%), Positives = 157/198 (79%)
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+LS +RL+++++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HA
Sbjct: 1 PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH
Sbjct: 61 NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G
Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180
Query: 334 SYCITDHHNIVHDYPPKS 351
Y ++D+ H YPP
Sbjct: 181 CYSVSDYRGGEHSYPPAG 198
>gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
SB]
Length = 594
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 30/359 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINP--HNPND-PI 56
+++ +T ++ L N + + + I++ N+ +TP +L++ ND +
Sbjct: 195 WHIKN-IVTDSKTLENLVRVSELEKYSIEKARENNIPFGITPYYVSLMDNSLDRRNDHAV 253
Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
Q IP + E R D +G+++ SP+ + RYP ++K C C +
Sbjct: 254 RAQVIPPVRYVEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313
Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
C R + + S + A+ + E I E++ TGGDP ILS++ L +L
Sbjct: 314 CQRNWQIKDVFSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEF 373
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
IKH++ +R +R P+ PQRI E + L + KP + I+ H H YE + +
Sbjct: 374 SKIKHLERIRIGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRD 433
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
AISRL N+GI + +Q V + E + L + + I+PYYL + T+++R+
Sbjct: 434 AISRLKNSGITVYNQQVFTIENSRRFET-SALRKVLKLIGIEPYYLFNTKGKEETTNYRV 492
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
I + + G C + N+ K+G + H+++
Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDVI 538
>gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
CCMP1335]
Length = 533
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 50/347 (14%)
Query: 27 EIKEISNHYSIALTPVIAN-LINPHNPN---DPIARQFIPQKEELNI-------LPEERE 75
++K + +P + LI+ + + DP R P + L+ E
Sbjct: 121 DVKLAGMVFPFKASPYYVDELIDWESEDVRQDPFYRLVFPTLDMLSDEHRMKLEAAYEEG 180
Query: 76 DP-----------------------IGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCR 110
DP + L G+ H+Y + +L+ C YC
Sbjct: 181 DPKNLIRTVEEIRSDLNPHPAGQKTLNAPKDDSLTGVQHKYSETVLVFPSAGQTCHAYCT 240
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+CFR + K+ ++ Y+ + ++ +++ TGGDP+++ K L + L+ L
Sbjct: 241 YCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEEVSDILMTGGDPMVMKTKSLARYLEPLT 300
Query: 171 Y---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLK----EAGKPVYIAIHANHPYE 218
+ H++ +R +R PQR E+I+ L+ E G+ V + H +H E
Sbjct: 301 DPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADEVIELLRRVREEGGRHVAVMAHLSHARE 360
Query: 219 F-SEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
+++ AAI R+ A + SQS +++GIND ++ A RT V + I PYY+
Sbjct: 361 LSTDKVKAAIQRIQKEAFATIRSQSPVMRGINDSSDVWAEKWRTEVNMGIIPYYMFLARD 420
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
F + + KI + SGL + + GKV++
Sbjct: 421 TGAQQFFDVPMATAHKIYSDALRNCSGLIRTARGPSMSCTPGKVEVT 467
>gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
Length = 475
Score = 278 bits (713), Expect = 7e-73, Method: Composition-based stats.
Identities = 89/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNH---YSIALTPVIANLINPH----N 51
Q R + + L + D++ + S+ L P + N I P
Sbjct: 41 WQ-RVHCVKNVAQLRGVLGDRVDDAFYDDLAADGDKRATMSMLLPPQMLNTIAPTLETTA 99
Query: 52 P--------NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
P DPI R +P ++ + P D + +++ +G+ HRYP ++L
Sbjct: 100 PGSWTEAYYADPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLA 159
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGG 152
+LL CP YC C R ++VG+ T+ +A + Y+Q + +V+ +GG
Sbjct: 160 ELLSTCPQYCGHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGG 219
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAG 204
D + K L+ + L I+ ++ +R ++ + PQ + + +E G
Sbjct: 220 DVANVPWKNLENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERG 279
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV- 262
+ I H NH + A + +AG+ + +Q VL+ G+N+ PE L +L
Sbjct: 280 VNLAIHTHVNHVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQG 339
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
E I PYY + D+ + H+R ++ E Q + ++ + G P I D+P GK +
Sbjct: 340 EANILPYYFYMCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP-FVGKRWV 398
Query: 323 DTHNIKKVGNG-SYCITDHHNIV---------HDYP 348
+G SY ++ + +YP
Sbjct: 399 HQVGRYDAEHGISYWTKNYRTSIEAADPDALTREYP 434
>gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4]
gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4]
Length = 463
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 45/391 (11%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52
Q R + + + L L++ +++ + S+ L P + N + PH +P
Sbjct: 49 WQ-RVHCVRNVKQLRALMGDLLEDRFYEDLLADQREMATMSMLLPPQMINTMAPHAGTDP 107
Query: 53 N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
DPI R +P + + + P D + + ++G+ HRYP ++L +
Sbjct: 108 AKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHEAEMWVVEGLTHRYPTKVLAE 167
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
++ CP YC C R ++VG+ + K +A Y++ + +V+ +GGD
Sbjct: 168 MISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDAMTDYLKRTPGVRDVVVSGGD 227
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-----INPELIQCL---KEAGK 205
+ +L+ L L I+ V+ +R ++ PQ + L + + G
Sbjct: 228 VANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWLQPKVTEGLQRVALTAQARGV 287
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
+ I H NH + A G+ + +Q VL++G+ND P L +L E
Sbjct: 288 NLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLMRGVNDTPAALLDLCFALQGE 347
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY + D+ H+R+ + E Q++ S+ + G P + D+P GK +
Sbjct: 348 ANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWV- 405
Query: 324 THNIKKVGNG---SYCITDHH-NIVHDYPPK 350
H + + SY ++ I H+ P
Sbjct: 406 -HQLAEYDRDLGISYWTKNYRTGIEHEDPEA 435
>gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2]
Length = 226
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 2/222 (0%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS++
Sbjct: 1 MTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNR 58
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+L L+ L +K +QILR HSRVPIV P RI+ +LI LK + + + +H+NH E
Sbjct: 59 KLALWLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELD 118
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
+ + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G
Sbjct: 119 DFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGA 178
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
HF L + I + + G P + ++ G K +
Sbjct: 179 QHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 220
>gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
Length = 467
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHNP--- 52
Q R + + + L L+ + ++ ++ S+ + P + N + P P
Sbjct: 57 WQ-RANCVKNIKQLRAVLGDLVSETFYADLEADQKALATMSMLVPPQMLNTMVPFAPMTT 115
Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DPI R IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 116 EALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 175
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ + K +A + Y++ + +V+ +GGD +
Sbjct: 176 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209
+ L+ L L I+ V+ +R ++ + PQ ++++ L G + I
Sbjct: 236 PWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 295
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
H NH + A + G+ + +Q VL++G+N L +L E I
Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 355
Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
PYY + D+ H+R+ + Q++ + + G P + D+P GK +
Sbjct: 356 PYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 414
Query: 327 IKKVGNGSYCITDHH 341
+ SY ++
Sbjct: 415 YDRERGISYWTKNYR 429
>gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
Length = 468
Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 43/386 (11%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKE----QIDEIKEISNHYSIALTPVIANLINPHN--- 51
Q H K + ++L + +E ++ + S+ + P + N + PH
Sbjct: 53 WQRAHCVKNVRQLREL--LGDLVEERFYADLERDQAERATMSMLVPPQMMNTMVPHEVPA 110
Query: 52 ---------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
DP+ IP ++ + P D + +++ +G+ HRYP ++L
Sbjct: 111 GPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVL 170
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151
+LL CP YC C R ++VG+ T+ K L Y++ Q+ +V+ +G
Sbjct: 171 AELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLGDMLDYLRRTPQVRDVVVSG 230
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LKEA 203
GD L RL+ L L I++++ +R ++ + PQ E ++ +
Sbjct: 231 GDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHWLQEDVRAGMARVAGTARSR 290
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262
G + I HANH + A + + AG+ + +Q VLL G+N P+ L +L +
Sbjct: 291 GVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVLLNGVNAGPDALLDLCFRLL 350
Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
+ +I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK
Sbjct: 351 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLPGFATPRIVCDVP-FVGKRW 409
Query: 322 I-DTHNIKKVGNGSYCITDHHNIVHD 346
+ + SY ++ +
Sbjct: 410 VHQVADYDTERGISYWTKNYRTSIET 435
>gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 572
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53
Q++ + + L + +E+ + N +TP +L++ +
Sbjct: 170 WQIK-QIIRELDPLAKLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 228
Query: 54 DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
I Q +P L D +G+ + SP + I RYP +LK + CP C
Sbjct: 229 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 288
Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++
Sbjct: 289 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 348
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223
+ I ++ +R +R + P R L+ L +P V + H HPYE + +
Sbjct: 349 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPDL 408
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A++RL GI + +Q V + E A L R + I PYY + T+ +
Sbjct: 409 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 467
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
R+ I + + GL G+ N+ + G ++
Sbjct: 468 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 512
>gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
Length = 598
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53
Q++ + + L + +E+ + N +TP +L++ +
Sbjct: 196 WQIK-QIIRELDPLDRLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 254
Query: 54 DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
I Q +P L D +G+ + SP + I RYP +LK + CP C
Sbjct: 255 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 314
Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++
Sbjct: 315 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 374
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223
+ I ++ +R +R + P R L+ L +P V + H HPYE + E
Sbjct: 375 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPEL 434
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A++RL GI + +Q V + E A L R + I PYY + T+ +
Sbjct: 435 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 493
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
R+ I + + GL G+ N+ + G ++
Sbjct: 494 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 538
>gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
Broad-1]
Length = 465
Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 42/381 (11%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKE---ISNHYSIALTPVIANLI-----NPH 50
Q R + + + L L+++ ++++ S+ + P + N + +
Sbjct: 50 WQ-RVNCIKNVRQLRALMGDLLEERFYADLEKDMAERATMSMLVPPQMVNTMVVSTSSTT 108
Query: 51 NPN--------DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
+P+ DPI IP ++ + P+ D + +++ +G+ HRYP ++L
Sbjct: 109 DPSEFTDAFYADPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVL 168
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151
+LL CP YC C R ++VG+ + K EA L Y++ Q+ +V+ +G
Sbjct: 169 AELLSTCPQYCGHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSG 228
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQ-------CLKEA 203
GD L RL+ L L I +++ +R ++ I PQ E L++ +E
Sbjct: 229 GDVANLPWPRLEDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARER 288
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262
G + + HANH + A L AG+ + +Q VLL G+N D L +L +
Sbjct: 289 GVSLAVHTHANHANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLL 348
Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
+ +I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK
Sbjct: 349 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP-FVGKRW 407
Query: 322 I-DTHNIKKVGNGSYCITDHH 341
+ + SY ++
Sbjct: 408 VHQLADYDTERGISYWTKNYR 428
>gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
Length = 483
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 159/383 (41%), Gaps = 44/383 (11%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51
Q R + + + L + L+ ++ + S+ + P + N + P
Sbjct: 39 WQ-RVNCVRNVKQLRSLMGDLLDDRFYTDLERDQAERATMSMLVPPQMLNTMVPATSAAM 97
Query: 52 -----------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
DPI R +P ++ + P D + +++ +G+ HRYP +
Sbjct: 98 PASGADFTEAFYADPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTK 157
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIF 149
+L +LL CP YC C R ++VG+ V K +A LAY++ + +V+
Sbjct: 158 VLAELLPTCPQYCGHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVV 217
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLK 201
+GGD + K L+ L L I +++ +R ++ + PQ + + +
Sbjct: 218 SGGDVANMPWKNLESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATAR 277
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
G + I H N+ + A + AG+ + +Q VL++GIND E L +L
Sbjct: 278 ARGVSLAIHTHVNNAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFA 337
Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ I PYY + D+ H+RL++ E Q++ S+ + G P + D+P GK
Sbjct: 338 LADGASITPYYFYMCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP-FVGK 396
Query: 320 VKIDTHNIKKVGNG-SYCITDHH 341
+ + G SY ++
Sbjct: 397 RWVHQQDEYDTERGISYWRKNYR 419
>gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 594
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 80/364 (21%), Positives = 145/364 (39%), Gaps = 28/364 (7%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIA 57
Q+RH + + L + + + + H +TP +L++ + I
Sbjct: 196 WQIRH-IVRELETLEKLVKLSDSEREAVALARKHKLPFGITPYYLSLMDDELGGRDASIR 254
Query: 58 RQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
Q +P + + ++ D +G+ + SP I RYP +LK + CP C +C
Sbjct: 255 AQVLPPMNYVQGVLAVKDPSCLDFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQ 314
Query: 114 RREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
R + G + + A+ +I + I EV+ TGGDPL + ++ L ++++ +
Sbjct: 315 RNWEIDEVMAPGAFAGMEKIKEAIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAA 374
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
I V+ +R +R + P R L + +P V + H HPYE + E + A+
Sbjct: 375 IPTVERIRLGTRTLVTMPMRFTEGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAV 434
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
+RL GI + +Q V I+ E A L R I PYY + T +R+ I
Sbjct: 435 NRLRQLGIPVYNQLVYTFFISRRFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493
Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+ + GL G+ N+ + G ++ N++
Sbjct: 494 ARLIQEQEEEARLLPGL-------------GRTDEAVFNVPRQGKSYLRAREYRNLLAIK 540
Query: 348 PPKS 351
P +
Sbjct: 541 PNGA 544
>gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 92/390 (23%), Positives = 164/390 (42%), Gaps = 43/390 (11%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPH---NP 52
Q R + + + L L+++ D++ + + L P + N + PH +P
Sbjct: 47 WQ-RVHCVRNIKQLRAVMGDLLEERFYDDLAADQQQMATMSMLLPPQMLNTMAPHAGTDP 105
Query: 53 N--------DPIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
DPI R +P E P + D + + ++G+ HRYP ++L +
Sbjct: 106 AKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHEAEMWVVEGLTHRYPTKVLAE 165
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
LL CP YC C R ++VG+ V + +A + Y++ + +V+ +GGD
Sbjct: 166 LLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDAMIDYLKRTPGVRDVVVSGGD 225
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
+ +L+ L L I+ V+ +R S+ PQ P++++ L + G
Sbjct: 226 VANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWLQPKVVEGLARVAGTARRRGV 285
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
+ I H NH + A G+ + +Q VL++G+N P L +L E
Sbjct: 286 NLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLMRGVNATPADLLDLCFALQGE 345
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
I PYY + D+ H+RL + E Q++ ++ + G P + D+P GK +
Sbjct: 346 ANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 404
Query: 324 --THNIKKVGNGSYCITDHH-NIVHDYPPK 350
++ G SY ++ I HD P
Sbjct: 405 QVAEYDRERGV-SYWTKNYRTGIEHDDPEA 433
>gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061]
gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 389
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 24/365 (6%)
Query: 1 MQLRHKTLTSAQDL-YNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPND---- 54
Q ++ L + L E I++ + +TP + I D
Sbjct: 26 WQQKN-ALRDEESLRIACGGWNDEITRRIQQNLQGQKMQITPYYLSRILTTSQSGDITTN 84
Query: 55 PIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
P+ RQ +P E + + E + H+Y +R++L++++ C YC+FCF
Sbjct: 85 PLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPICQHKYDNRVILRMVNACNSYCQFCF 144
Query: 114 ---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
R V S K + +L YI+ + EVI +GGDPL+L+ +L + L +R
Sbjct: 145 EALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLAAIR 203
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
I+ ++R HSR +P RI L++ LK+ +H HP+E SEE A+ +
Sbjct: 204 EIREDLLIRVHSRALTFNPYRITDALLEILKKHRVN-SFGVHICHPHELSEEFQHAVRCI 262
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEE 289
+ I+ S L+GIND+ EIL L + + +KPYYL+H + G+S ++ +I +
Sbjct: 263 QSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKASIND 322
Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHH 341
I+ LK ++S + P Y+ LP GK V + + G Y +
Sbjct: 323 AIAIMGKLKRRVSNIALPEYV--LPHMKGKFTVPLFTNPGEMPYFETINGRRYYRFINWR 380
Query: 342 NIVHD 346
N +
Sbjct: 381 NEQCE 385
>gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I]
gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 633
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 28/361 (7%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56
Q++H LT + + + +++I +K H + +TP +L N + +
Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294
Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
Q +P + + R+ D +G+ SP++GI RYP ++LK CP C +
Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C R + S + + A+ +I++ I EV+ TGGDPL ++ + + +L+ +
Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
I HV+ LR +R P+ P RI P+L + LK+ +P V + H HP E + E++ A+
Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474
Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
+ AG+ + +Q V N +A + + + PYY + T FR+ I
Sbjct: 475 QTIRQAGMSVYNQQVFTYY-NSRKFEIAKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533
Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
++ G+ + D P N+ K+G H ++
Sbjct: 534 ARVEQERKEEARLQPGIVRT----DEP---------VFNVPKLGKSHLRAWQDHEVIMIL 580
Query: 348 P 348
P
Sbjct: 581 P 581
>gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3]
Length = 195
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 115/195 (58%), Positives = 153/195 (78%)
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +RL+ +++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HANHP
Sbjct: 1 LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL
Sbjct: 61 RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Y
Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180
Query: 337 ITDHHNIVHDYPPKS 351
++D+ H YPP
Sbjct: 181 VSDYRGGEHSYPPAG 195
>gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
Length = 485
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 84/376 (22%), Positives = 146/376 (38%), Gaps = 48/376 (12%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELN 68
+ + + I + + + + NLI+ P+DP+ R P + L
Sbjct: 49 LSQVPQLKSLPPRLVRGIHLAAMVFPFKVNSYVLDNLIDWGAAPDDPMFRLVFPHPDMLQ 108
Query: 69 ILPEEREDPIGDNNHSP-------------------------------LKGIVHRYPDRI 97
E D + + L+G+ H+Y +
Sbjct: 109 DGDREVLDDLLERGDEVAIAAEVQRIRADMNPHSSDQIVNVPLFEGASLEGVQHKYDETA 168
Query: 98 LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L K C YC FCFR ++D E AY++ + I +V+ TGGDP
Sbjct: 169 LFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTRRDITDVLLTGGDPF 228
Query: 156 ILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCL---KEAGK 205
++S +RL L+ L HV +R ++ PQR EL + L ++GK
Sbjct: 229 VMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAEELNRLLVRVADSGK 288
Query: 206 PVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
V + H NH E + E A+ L +G ++ +QS +L+ +NDD + R V +
Sbjct: 289 QVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDDVAVWRRNWRDQVAM 348
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
+ PYY+ +FR++++ I + +SG+C+ + G GK+ +
Sbjct: 349 GMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARGPVMSAGPGKIHVL- 407
Query: 325 HNIKKVGNGSYCITDH 340
+GN Y +
Sbjct: 408 -GRLAIGNDDYFVLSF 422
>gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
Length = 314
Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 13/247 (5%)
Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ H+Y + +L C YC FCFR L+S++ +A + Y+ E ++ +
Sbjct: 1 MQHKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSD 60
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
++ TGGDP+I+ + L + L + H++ +R ++ P R + L
Sbjct: 61 ILLTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTL 120
Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
+ K + H NHP E ++ AI + G + +QS LL IND PEI A
Sbjct: 121 FAKVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWA 180
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
+ +T EL PYY+ +F +++ I + + ++GL + +
Sbjct: 181 EMWKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSA 240
Query: 316 GYGKVKI 322
GKV++
Sbjct: 241 TPGKVQM 247
>gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
Length = 216
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 2/218 (0%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
C V+CR+CFRR +++ + + A+ I + I EV+ +GGDPL L+ +L +
Sbjct: 1 CAVHCRYCFRRHFPYAEE--TAAREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
+ L I H++ LR HSR+P+V P R++ L+ L+ PV IHANH EF +
Sbjct: 59 LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ L + G+ LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF
Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + + A L ++SG P + ++PG GK +
Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL 216
>gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
fervens AG86]
Length = 620
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 81/362 (22%), Positives = 149/362 (41%), Gaps = 36/362 (9%)
Query: 1 MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
Q ++ K + + ++L I E ++ I K + N +TP +L + NP
Sbjct: 217 WQFKNVIKGLKGIETLKELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ IP + + + E +ED +G+++ SP+ + RY ++K
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMGEHDTSPIDLVTRRYVPIAIIKPYE 336
Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
CP C +C R MV + E AL + E + E++ TGGDP LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L + + HV +RF +R + P RI EL + L K + ++ H YE + E
Sbjct: 397 ERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAELLGSFEKSLMVSTHVESCYEITPE 456
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
+ +L I + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 457 VKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515
Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + I Q++ + L G + N+ ++G +
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559
Query: 342 NI 343
+
Sbjct: 560 DR 561
>gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771]
Length = 320
Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 11/290 (3%)
Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
+T + I + + P +E D G++ ++ + G H+Y
Sbjct: 15 RVTRFYRDQIVKSGFFEQLKFIVEPSLKEFESPG--SLDTSGEHENTVVPGFQHKYEQTG 72
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL C YCR+CFR+ +VG + + + + + YI ++ V+ +GGDP +L
Sbjct: 73 LLLATDRCASYCRYCFRKRIVGQESSEIAN--EFAQIVEYIGSHLEMTNVLISGGDPFVL 130
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGKPVYIAIHA 213
+L +L L H++ +RF +++ P+R L Q + EAGK I H
Sbjct: 131 RTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDPELGALFQRIHEAGKTAVIVTHF 190
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+H E S +A +I L + G+ L+QSVLL +NDDPEILA+ T ++ I PYYL
Sbjct: 191 DHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDPEILASTFATCHQMGIHPYYLFQ 250
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322
G SHF++ ++ G +I + +++SG+ + YI + GK+++
Sbjct: 251 SRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI--MSHYTGKIEL 298
>gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
FS406-22]
Length = 620
Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 36/362 (9%)
Query: 1 MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
Q ++ + L + L I E ++ I K + N +TP +L + NP
Sbjct: 217 WQFKNVLRGLKGVKILRELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ IP + + + E +ED +G+++ SP+ + RY ++K
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336
Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
CP C +C R MV + + E AL + E + E++ TGGDP LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+K+L + + HV +RF +R + P RI EL + L K V I+ H + YE + E
Sbjct: 397 EKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSVMISTHVENCYEITPE 456
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
A+ +L I + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 457 VKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515
Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + I Q++ + L G + N+ ++G +
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559
Query: 342 NI 343
+
Sbjct: 560 DR 561
>gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 470
Score = 271 bits (695), Expect = 9e-71, Method: Composition-based stats.
Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 52/373 (13%)
Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN---DPIA 57
+ + +L+ + + + K + +I+ + +P + LI+ + DP
Sbjct: 33 RYKAISLSHLEKVAEKHPQLKPHLRDIQLSGLVFPFKASPYYVDELIDWECEDVREDPFY 92
Query: 58 RQFIPQ-------------------------------KEELNILPEEREDPIGDNNHSPL 86
+ P +E+LN P +++ + L
Sbjct: 93 KLVFPTMDMLIEEHREKLEKAHKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKL 151
Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H+Y + +L+ C YC +CFR + K+ + Y+ E ++
Sbjct: 152 TGVQHKYSETVLVFPAAAQTCHAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEV 211
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP------- 194
+++ TGGDP+I+ K L + L+ L + H++ LR +R PQR
Sbjct: 212 SDILMTGGDPMIMKTKSLAQYLEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADEC 271
Query: 195 -ELIQCLKEAG-KPVYIAIHANHPYEF-SEEAIAAISRL-ANAGIILLSQSVLLKGINDD 250
EL + ++E G + + I H H E +++ A++R+ A + SQS +++G+NDD
Sbjct: 272 IELFRRVREQGNRHIAIMAHLGHDRELSTDKFQDAVNRIQKEAYATIRSQSPIMRGVNDD 331
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
E+ A R V++ I PYY+ +F + + K+ + SGL +
Sbjct: 332 AEVWARKWRKEVQMGIIPYYMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARG 391
Query: 311 LDLPGGYGKVKID 323
+ GKV++
Sbjct: 392 PSMSCTPGKVEVT 404
>gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
Length = 484
Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 51/388 (13%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLI----NP 49
Q R + + L L+ ++ + D+++ + S+ + P + N + +
Sbjct: 40 WQ-RAHCVKNVAQLRELMGDLLTEDFYADLERDQVERAT--MSMLVPPQMMNTMVSEMSW 96
Query: 50 HN--------------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVH 91
+ DP+ R +P ++ + P D + +++ ++G+ H
Sbjct: 97 ADGSMPAAGAAFTEAFLADPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTH 156
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQI 144
RYP ++L ++L CP YC C R ++VG+ ++ K A L Y+Q Q+
Sbjct: 157 RYPTKVLAEMLPTCPQYCGHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQV 216
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL--- 200
+V+ +GGD + K L+ L L I +++ +R ++ + PQ P++++ +
Sbjct: 217 RDVVVSGGDVANMPWKNLEGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARV 276
Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILA 255
+ G + I H NH + A + AG+ + +Q VL++GIND + L
Sbjct: 277 SALARSRGVSLAIHTHVNHAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLL 336
Query: 256 NLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+L + I PYY + D+ + H+RL + E Q + S+ + G P + D+P
Sbjct: 337 DLCFALQDEAMITPYYFYMCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVP 396
Query: 315 GGYGKVKIDTHNIKKVGNG-SYCITDHH 341
GK + + G S+ ++
Sbjct: 397 -FVGKRWVHQVDTYDRDKGMSFWRKNYR 423
>gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM
2661]
gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634
gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 620
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 36/362 (9%)
Query: 1 MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
Q ++ K + ++L I E ++ I K + N LTP +L + NP
Sbjct: 217 WQFKNVLRGLKGVKILRELREVTNFKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 276
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ IP + + + E +ED +G+++ SP+ + RY ++K
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336
Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
CP C +C R MV + E AL + E + E++ TGGDP LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+K+L + + HV +RF +R + P RI EL + L K + I+ H YE + E
Sbjct: 397 EKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPE 456
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
A+ +L I + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 457 VAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515
Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + I Q++ + L G + N+ ++G +
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559
Query: 342 NI 343
+
Sbjct: 560 DR 561
>gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 594
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 86/360 (23%), Positives = 154/360 (42%), Gaps = 21/360 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINP--HNPND-PI 56
++H + + L + + E+ I +TP A+L++ D +
Sbjct: 194 WHVKH-IIRDEKILGDLVQLTDEEKQAIALARERRIPFGITPYYASLMDEKEDRKRDYAV 252
Query: 57 ARQFIPQK------EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
Q IP E E D + +N+ SP++GI RYP ++LK + CP C
Sbjct: 253 RAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIEGITRRYPMIVILKPILTCPQICV 312
Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
+C R + + LS K E A+ +I + +I EV+ TGGDP +LS+ R++ +L
Sbjct: 313 YCQRNWEIEDVYSQTAALSQKKLERAIQWIADTPEIREVLVTGGDPFLLSNSRIENLLFR 372
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
L IKH++ +R +R P+ PQRI L + + +P + + H HPYE + A+
Sbjct: 373 LSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFHEPGKREITVITHFEHPYEITPNAM 432
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
A+ ++ G+ + +Q V N A L + + PYY + T +R
Sbjct: 433 EAVQKIRRLGMSVKNQMVFT-TFNSRKFEAAVLRHKLSLIGVSPYYTFNTKGKEETEDYR 491
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK---VKIDTHNIKKVGNGSYCITDHH 341
+ + + A + G + ++ G GK + H++ + + + H
Sbjct: 492 VPLARLLQERAEEARLMPGTVRTDGVVFNVPGLGKNDITAMQHHSVLSILPNGRRVYEFH 551
>gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
Length = 407
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 49/340 (14%)
Query: 32 SNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEER--------------- 74
S I LI+ P+DP+ + Q L R
Sbjct: 2 STVLPFKTNEYIVEELIDWDRVPDDPMFQLTFVQSGMLAEHDYARMAELVRAGASKAEIR 61
Query: 75 -----------EDPIGDNNHSP-------LKGIVHRYPDRILLKL--LHVCPVYCRFCFR 114
P G +H+ L+G+ H+Y + +L C YC FCFR
Sbjct: 62 SAADAIRLRLNPHPAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFR 121
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YI 172
+G S++ Y++ + +V+FTGGDP+++ + L++ ++ L
Sbjct: 122 WAQFVGLEGMKFESREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDF 181
Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEA 223
+H+ +R ++ PQR + L + + +G+ + + H NHP E +E A
Sbjct: 182 EHIN-VRIGTKSVSYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVA 240
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A++R+ + G + QS L++ IND PE A L RT V+L PYY+ ++F
Sbjct: 241 QRAVARIRSTGAQIRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYF 300
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
+ + +I ++SGL + + GKV +D
Sbjct: 301 EVPLARAWEIFGDAYRQVSGLARTVRGPSMSTMPGKVLVD 340
>gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
vulcanius M7]
Length = 621
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 84/362 (23%), Positives = 148/362 (40%), Gaps = 36/362 (9%)
Query: 1 MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
Q ++ + L + L I + ++ I K + N LTP +L + NP
Sbjct: 218 WQFKNVLRGLKGVEILKKLREETNFKISDDDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 277
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ IP + + + E +ED +G+++ SP+ I RY ++K
Sbjct: 278 YVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMGEHDTSPIDLITRRYVTIAIVKPYE 337
Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
CP C +C R MV + E AL + E + E++ TGGDP LS K +
Sbjct: 338 SCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWFAEHDSMIEILITGGDPFSLSDKAI 397
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++L + + HV +RF +R + P RI EL + L K + I+ H YE + E
Sbjct: 398 ERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKRIMISTHVESCYEITPE 457
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
A+ +L I + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 458 VKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 516
Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
+ + I Q++ + L G + N+ ++G +
Sbjct: 517 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 560
Query: 342 NI 343
+
Sbjct: 561 DR 562
>gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 385
Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats.
Identities = 93/364 (25%), Positives = 160/364 (43%), Gaps = 20/364 (5%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH---NP--NDP 55
Q ++ +E I++ + +TP +LI P P
Sbjct: 20 WQQKNALRDEPALRSACGGWNQEISIRIEQNLLGRKMQITPYYVDLIMQSLGSEPVTEHP 79
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF- 113
+ RQ +P E + + + NH H+Y +R++L++ + C YC+FCF
Sbjct: 80 LWRQVVPYWNENVMGDYDGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQFCFE 139
Query: 114 --RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
R VG+ K + + ++ YI+ I EVI +GGDPL+LS ++L++ L LR
Sbjct: 140 ALRTLQVGTDKKNANTDLFLD-SVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLAALRS 198
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
I+ ++R HSR +P R+ E + L + +H HP E S + AIS++
Sbjct: 199 IREDLLIRIHSRALSFNPFRVTDEFVAILAKYKVN-AFGVHVCHPLELSVDFERAISKIR 257
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEG 290
A I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +I +
Sbjct: 258 IAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKASISQA 317
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI----DTHNIK----KVGNGSYCITDHHN 342
I+ LK ++S + P Y+L G V + ++ + G Y +
Sbjct: 318 IAIMNRLKRRVSNIALPEYVLPHAQGKFTVPLVDFEQPEDLPRFENRDGQRYYKFKNCEG 377
Query: 343 IVHD 346
Sbjct: 378 QWCT 381
>gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437]
Length = 377
Score = 268 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + + + ++ + ++P ++ L DP+A+QFIP E E+ G
Sbjct: 9 VHRTEREMVLDVIGKFRTKMSPALSRLAKQS---DPVAKQFIPSPYEALDFGTEKPFEEG 65
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
NNH + G+ Y DR +L C YCR+CF++ + +S +D + A+ +I+
Sbjct: 66 KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
S+I V+ TGGDPL+ + L+KVL + I H++ +R +R + P+++ P+L +
Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183
Query: 200 LKEA----------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ K + I + NH E + E + A RL GI + Q VLLKGIND
Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
+ L+ TF+ I PYYL H G HFR ++++G ++ L SG Y
Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELSPY-SGTTTFQY 302
Query: 310 ILDLPGGYGKVKIDTHN---IKKVGNGSYC 336
+ P GK +I + K+ Y
Sbjct: 303 VYVTP--IGKHRIAPGHQLEYVKIDGSRYI 330
>gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
Length = 459
Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 76/381 (19%), Positives = 154/381 (40%), Gaps = 39/381 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINP-----H 50
Q R + + + L L+ +++ + + L P + N + P
Sbjct: 48 WQ-RAHCVKNVKQLRAVLGDLVDDRFYADLEADQEQLATMSMLLPPQMLNTVVPRLGEGG 106
Query: 51 N-----PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
+ DP+ R +P + + + P D + + ++G+ HRYP ++L +L
Sbjct: 107 DFTEAFYADPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAEL 166
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDP 154
+ CP YC C R ++VG+ V K + + Y++ + +V+ +GGD
Sbjct: 167 VSTCPQYCGHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDV 226
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKP 206
+ +L+ L L ++ V+ +R ++ PQ + P++++ L G
Sbjct: 227 ANVPWPQLESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVN 286
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-EL 264
+ I H NH + A G+ + +Q VL++G+N L +L E
Sbjct: 287 LAIHTHVNHANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEA 346
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-D 323
+ PYY + D+ H+R+ + E Q++ ++ + G P + D+P GK +
Sbjct: 347 GVLPYYFYMCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQ 405
Query: 324 THNIKKVGNGSYCITDHHNIV 344
+ SY ++ +
Sbjct: 406 VQEYDRERGVSYWTKNYRTGI 426
>gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
Length = 469
Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/376 (22%), Positives = 160/376 (42%), Gaps = 37/376 (9%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
Q R + + + L ++ + ++ S+ + P + N + PH P
Sbjct: 58 WQ-RVNCIKNIKQLRAVLGDTVDESLYTDLAADQDAHATMSMLVPPQMINTMVPHAPPTT 116
Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
DPI R IP + P D + +++ +G+ HRYP ++L +LL
Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
CP YC C R ++VG+ V K +A +AY++ + +V+ +GGD +
Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAYLKAHPGVRDVVVSGGDVANV 236
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKE-------AGKPVYI 209
+ L+ L L I+ ++ +R ++ + PQ P++++ L+ G + I
Sbjct: 237 PWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVELR-I 266
H NH + A + G+ + +Q VL++G+N P++L L R F + I
Sbjct: 297 HTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVNATAPDLLGPLFRPFRRKKKI 356
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325
PYY + D+ H+R+ + Q++ + + G P + D+P GK +
Sbjct: 357 LPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLT 415
Query: 326 NIKKVGNGSYCITDHH 341
+ + SY ++
Sbjct: 416 DYDREHGISYWTKNYR 431
>gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei]
Length = 403
Score = 266 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 34/328 (10%)
Query: 53 NDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+DP+ R +P + + P D + + + ++G+ HRYP ++L +LL CP Y
Sbjct: 56 DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115
Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C R ++VG+ V S+ + LA+++ I +V+ +GGD + R
Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIAIHA 213
L++ L L I ++ +R S+ I PQ N + + + G + + HA
Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235
Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
N + + A L +AG+ + +Q VL++G+ND L +L + I PYY
Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295
Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKK 329
+ D+ H+R+ + Q I + + G P + D+P GK +D ++
Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVDQTDSYDRE 354
Query: 330 VGNGSYCI----------TDHHNIVHDY 347
+G + D H+ + Y
Sbjct: 355 LGVSHWSKSYLTPLEAADRDAHDGTYHY 382
>gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6]
gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6]
Length = 582
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN--PHNPNDP 55
Q RH K + + + A + +E I+ + NH +TP +L++ P + +
Sbjct: 180 WQFRHVFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSDMDYA 239
Query: 56 IARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
+ RQ P + + R+D + + + SP+ I RYP ++K CP C
Sbjct: 240 VRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESCPQIC 299
Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+C R + S + + EAA+ + E ++ +V+ TGGDPL++ + ++L
Sbjct: 300 VYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLIDRILN 359
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEFSEEA 223
L I H++ +R SR P PQR+ EL + L + + + H HPYE + E
Sbjct: 360 RLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEVTPET 419
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
+AAI R+ GI + +Q V + E ++L ++ + PYY + +
Sbjct: 420 LAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYYTFNMKGKTEMEDY 478
Query: 284 RLTIEEGQKIVASLKEKISGLCQP 307
+ I + + G+ +
Sbjct: 479 AVPIARILQERKEEARLLPGIFRT 502
>gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C]
gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C]
Length = 463
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 44/363 (12%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLINPHN-- 51
Q R + A+ L L+ +E + D + + S+ L P + N +
Sbjct: 48 WQ-RAHCVKDAKGLRAVVGDLLDEEFYEDWERDRLHRAT--MSVLLPPQMINTMAAEASA 104
Query: 52 ----------PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRI 97
+DP+ R +P + + P D + + + ++G+ HRYP ++
Sbjct: 105 ARPGELTKAFYDDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKV 164
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFT 150
L +LL CP YC C R ++VG+ V ++ E LA+++ I +V+ +
Sbjct: 165 LAELLSTCPQYCGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVS 224
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKE 202
GGD + RL++ + L I+ ++ +R S+ I PQ + + +
Sbjct: 225 GGDLANMPWPRLERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARS 284
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTF 261
G V + HAN + + A L AG+ + +Q VL++G+ND L +L
Sbjct: 285 RGVRVALHTHANAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFAL 344
Query: 262 VE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ I PYY + D+ H+R+ + Q I + + G P + D+P GK
Sbjct: 345 CDHAGITPYYFYMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKR 403
Query: 321 KID 323
+D
Sbjct: 404 WVD 406
>gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
Length = 333
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 21/333 (6%)
Query: 20 IKKEQIDEIKEISN--HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-- 75
+ EQ +K++ +S LTP + L Q I E N E
Sbjct: 1 MSAEQKIVVKQVEEETRFSEKLTPYLKELSKTS--------QAIKDMYEFNPEYETLPAN 52
Query: 76 ---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKD 130
D + + +P+ G V +Y ++L+ L + C CR+C R++ VG L
Sbjct: 53 LDVDLLNEKTSTPVFGTVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ 112
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ + YI I+EVI +GGDPL + K LQ + L+ I HV+++R H+R P+ +P
Sbjct: 113 IDDIVDYIANDKSIYEVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPG 171
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ EL++ L +A VY+++H +HP E E I I G +LL+Q+V LK INDD
Sbjct: 172 KVRMELMEELAQAKPTVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDD 231
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
+ L L EL ++PYY++H T F + +E+ I+ L+ ++SGL P ++
Sbjct: 232 KDTLKTLFLRLFELGVRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHV 291
Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
+D+P GKV + + + + +TD +
Sbjct: 292 IDIPSASGKVVVPSDH---WQTDTATVTDFYGK 321
>gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
Length = 441
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 74/358 (20%), Positives = 142/358 (39%), Gaps = 45/358 (12%)
Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQFIPQKEE-- 66
++ + + + ++ S + + + LI+ P+ DP+ F PQ
Sbjct: 22 LDEIAAKYGLDPQLRESVRLFSLVLPFRVNEYVLSELIDWSAPDADPVFHLFFPQPGMLS 81
Query: 67 -----------------------------LNILPEERED-PIGDNNHSPLKGIVHRYPDR 96
+N PE ++D + + PL G H+Y
Sbjct: 82 PEDEQRLTAARDGGDAGELARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQT 141
Query: 97 ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+L C YC +CFR + S+ D A+AY++ ++ +V+ TGGDP
Sbjct: 142 LLYFPAAGQTCHAYCTYCFRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDP 201
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKP 206
++++ +RL++ L+ ++ +Q +R ++ P R L + + EAGK
Sbjct: 202 MVMTAERLRQHLEPFLAVESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKT 261
Query: 207 VYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ H +HP E A A+SR+ + G ++ Q+ ++ +NDD A L R
Sbjct: 262 PALMAHLSHPVELEPAIARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAG 321
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
PYY+ +F++ + ++ + GL + + GKV +D
Sbjct: 322 AVPYYMFVARDTGPRDYFKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379
>gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054]
Length = 487
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 84/379 (22%), Positives = 152/379 (40%), Gaps = 40/379 (10%)
Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHN---P 52
Q R + + L L+ DE+ ++ + + P + N + P
Sbjct: 39 WQ-RAHCVQGERQLRQVFGPLLTDRFYDELAADQREFATMSVLVPPQMLNTMAAGAELAP 97
Query: 53 N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
+ DP+ R +P + + + P D + + ++G+ HRYP ++L +
Sbjct: 98 DAFTEAFLADPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAE 157
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGD 153
LL CP YC C R ++VG V ++ E L Y++ + +V+ +GGD
Sbjct: 158 LLSTCPQYCGHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGD 217
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
+ RL+ L L + V+ +R S+ + PQ + +
Sbjct: 218 LANVPWPRLESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSV 277
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
+ + HANH + A L +AG+ + +Q VL++G+N P L +L E
Sbjct: 278 NLAVHTHANHAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGE 337
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI- 322
I PYY + D+ H+RL + E Q + ++ + G P + D+P GK +
Sbjct: 338 ANILPYYFYLCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPD-VGKRWVH 396
Query: 323 DTHNIKKVGNGSYCITDHH 341
+V SY ++
Sbjct: 397 QAVGYDRVRGISYWTKNYR 415
>gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
Length = 512
Score = 259 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 50/343 (14%)
Query: 30 EISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQK----------------------- 64
+ + + LI+ N P DPI + PQ
Sbjct: 80 AAATVLPMRTNNYVVQELIDWSNVPEDPIFQLTFPQPGMLKPEALERISKLMKNNAPRTV 139
Query: 65 ---------EELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYCRFC 112
+E+N P +++ + + PL G+ H+Y + +L C YC +C
Sbjct: 140 LQREAEVIRKEMNPHPAQQKTMNVPRVDGHPLPGLQHKYRETVLFFPAEGQFCHAYCTYC 199
Query: 113 FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
FR S S D++ Y++ + +++ TGGDP+++S +RL + L
Sbjct: 200 FRWAQFTSVGSPQQFQSDDSKLLQLYLRRNRHVSDLLLTGGDPMVMSAQRLGGYILPLLK 259
Query: 172 ---IKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEF- 219
+ ++ +R ++ P R + +L++ + ++G+ + I H +HP E
Sbjct: 260 DTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKSGRQLAIMAHFSHPRELS 319
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ AI RL G ++ +Q+ L+ +N DP A L+RT L + PYY+
Sbjct: 320 TPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTETRLGVIPYYMFVERDTGA 379
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+F + + +I + +SGL + + GKV +
Sbjct: 380 RHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422
>gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
infernus ME]
Length = 589
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 93/379 (24%), Positives = 157/379 (41%), Gaps = 35/379 (9%)
Query: 1 MQLRH-----KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP-- 52
Q ++ K L +DL + I +E + + K I N+ A+TP +L + P
Sbjct: 190 WQFKNVIKGKKGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYK 249
Query: 53 -NDPIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
+ PI RQ IP + +N++ E D +G+ + +P + I RY ++K CP
Sbjct: 250 YDLPIRRQVIPPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQ 309
Query: 108 YCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
C +C R M+ E AL + +E + E++ TGGDPL LS ++K++
Sbjct: 310 ICVYCQRNWMIKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIV 369
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIA 225
+ ++ HV +RF +R + P RI L+ L K V ++ HA YE + E
Sbjct: 370 ERIKNFDHVIGVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKR 429
Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
A+ L + I + +Q V + ++ E +A L ++ I PYY +P + +
Sbjct: 430 AVELLGSKNIRVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYPKGKEEHRDYLI 488
Query: 286 TIEEGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
I + V + G P + G + I IK G Y +
Sbjct: 489 PIARIVQEVHEEARLLPGTFRTDEPIFNVPRLGKNHLRGENRELIA---IKPDGRRVYIM 545
Query: 338 TDHHNIVH--------DYP 348
++ DYP
Sbjct: 546 HPWEKGIYKTNIYVYEDYP 564
>gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
Length = 647
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/366 (22%), Positives = 149/366 (40%), Gaps = 39/366 (10%)
Query: 1 MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIK-EISNHYSIALTPVIANLINPHNP 52
Q H K L + ++L ++ +E + +++ + +TP +L + NP
Sbjct: 239 WQFSHVLKREKGLETLRELNELGIVKVPEEDLKQVEIAVKYGIPWGITPYYLHLWDFENP 298
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ +P ++ + + RED +G+++ SPL I RY +LK
Sbjct: 299 YKEDRHVRRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYD 358
Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
CP C +C R V G+ EAA+ + E + +V+ TGGDPL LS K
Sbjct: 359 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKI 418
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
+ K++ L HV +R+ SR+ + P RI L + L + V I+ H Y
Sbjct: 419 IDKIMSRLSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAY 478
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E + E A ++ GI + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 479 EVTPEVAEATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYPKGK 537
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
+ + I + + G + D P N+ ++G +
Sbjct: 538 IEQKDYLVPIARVVQERKEEARLLPG----QFRPDEP---------VFNVPRMGKNH--L 582
Query: 338 TDHHNI 343
+
Sbjct: 583 RAWQDR 588
>gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
Length = 260
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ ++ + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 81 AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+
Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
P+V P RI L Q L+++ + +H NH E + A +
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242
>gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
KIN4/I]
Length = 621
Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 84/369 (22%), Positives = 156/369 (42%), Gaps = 37/369 (10%)
Query: 1 MQLRH-----KTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLINPHN--P 52
++ + + ++L + +E +++ + +TP +L +
Sbjct: 215 WHYKNALRGKRAIKVLKELVK--GLSEEDWKALEDAVKYNVPFGITPYYLHLFDFDEGWK 272
Query: 53 ND-PIARQFIP---QKEELNILPEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
+D + RQ +P +E+ +ERE D +G+++ SP I RYP +LK H C
Sbjct: 273 HDYAVRRQVLPPLHYVKEMVAHLDEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTC 332
Query: 106 PVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
P C +C R M K + + + A+ + E I +V+ TGGDP IL + ++
Sbjct: 333 PQICVYCQRNWEIMTAMDKEAIPTRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIE 392
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEF 219
++K L + HV+++RF +R P+ P RI PE + L + +++ H H YE
Sbjct: 393 HIVKRLSELDHVKMIRFGTRTPVTVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEV 452
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ E A++ L I + +Q V + E + L + I PYY +P
Sbjct: 453 TPEMAEAVTNLRKNKIYVYNQQVFTFWNSRRFET-SALRIALKSIGIDPYYTFYPKGKWE 511
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
T + + + I+ KE+ LPG + + + N+ ++G
Sbjct: 512 TKDYLVPVAR---ILQERKEE---------ARVLPGTF-RTEEPVFNVPRLGKNHLRAWQ 558
Query: 340 HHNIVHDYP 348
H ++ P
Sbjct: 559 DHELIMIRP 567
>gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
Length = 636
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 24/326 (7%)
Query: 1 MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIKEISN-HYSIALTPVIANLINPHNP 52
Q H K L ++L ++ +E ++E++ +TP +L + P
Sbjct: 228 WQFSHVLKGRKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEP 287
Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
+ + RQ +P K ++ + R+D +G+++ SP+ + RY +LK
Sbjct: 288 YKEDRHVRRQVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFD 347
Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
CP C +C R V G+ E A+ + E+ + +V+ TGGDP LS+K
Sbjct: 348 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKI 407
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
+ K++ L HV +R+ +R+P+ P R+ EL + L + V ++ H Y
Sbjct: 408 IDKIMSRLSEFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAY 467
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
E + E A+ L GI + +Q V + ++ E +A L ++ I PYY +P
Sbjct: 468 EVTPEMARAVYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYPKGK 526
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISG 303
+ + I + + G
Sbjct: 527 IEQRDYLVPIARVIQERKEEARLLPG 552
>gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
Length = 174
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 89/169 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I H++ LR HSR+P+V P R+ L Q L+++ + +H NH
Sbjct: 1 MAKDDELDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E + A S+L A + LL+Q VLL+G+ND E+LA+L R + + PYYLH D
Sbjct: 61 ANEMDDALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
G +HF + E ++I+ +L +SG P ++ G K +D
Sbjct: 121 KVQGAAHFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLDL 169
>gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 174
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 89/169 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I HV+ LR HSR+PIV P RI L + + V + H NH
Sbjct: 1 MAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E E AA++ L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D
Sbjct: 61 ANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
G +HF ++ +E ++I+ L ISG P ++ G K +D
Sbjct: 121 RVQGAAHFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLDL 169
>gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 188
Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 105/188 (55%)
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++
Sbjct: 1 MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
L+ L++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + L
Sbjct: 61 PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
A L + PYYLH D AG +HF + + + L ++SG P + ++P
Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180
Query: 315 GGYGKVKI 322
G GK +
Sbjct: 181 GDTGKRPL 188
>gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
Length = 174
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 89/169 (52%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L ++ L I H++ LR HSR+P+V P R+ L Q L + V + H NH
Sbjct: 1 MAKDHELDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINH 60
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
E ++++L AG+ LL+QSVLL+ INDD + LA L + I PYY+H D
Sbjct: 61 ANEIDAALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLD 120
Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
G +HF ++ ++ ++I+ +L K+SG P ++ G K +D
Sbjct: 121 KVQGAAHFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLDL 169
>gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
Length = 440
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 78/341 (22%), Positives = 141/341 (41%), Gaps = 47/341 (13%)
Query: 26 DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEEL---------------- 67
E +S ++ + + LI+ P+DPI R P ++ L
Sbjct: 37 HEAHVVSQVLPFKVSSYVVDELIDWGRAPDDPIYRLTFPHRDMLEIEHFDLIERAVAQGD 96
Query: 68 ---------------NILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYC 109
N P ++ + ++ G+ H+Y + +L+ C YC
Sbjct: 97 RGTVRQAVDTVRAALNPHPGDQLSMNVPQHDDIDGSGMQHKYAETLLVFPRQGQTCHSYC 156
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+CFR ++ EA Y+ I +V+ TGGDPL++ + L L+ L
Sbjct: 157 GYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLASYLEPL 216
Query: 170 RY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF 219
+HV+ +R ++ P R+ L++ L AGK V + +H +H E
Sbjct: 217 LEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLSHVAEL 276
Query: 220 -SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
++ A A++RLA+ G +L +Q+ +++ +NDDP A+L + V R+ PYY+
Sbjct: 277 QTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFVERDTG 336
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+F L + I +++SGL + + GK
Sbjct: 337 ARPYFGLPLARAVDIYREALQRVSGLGRTARGPVMSASPGK 377
>gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 202
Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 97/179 (54%)
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+ L+
Sbjct: 24 IDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSL 83
Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P +HANH EF A+ L + G LL+Q+VLL G+ND + LA L
Sbjct: 84 PWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFA 143
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK +
Sbjct: 144 AGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL 202
>gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 219
Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
+T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E
Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199
Query: 187 VDPQRINPELIQCLKEAGKP 206
V P RI EL+ ++
Sbjct: 200 VIPARITDELVARFDQSCLQ 219
>gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 384
Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 24/333 (7%)
Query: 33 NHYSIALTPVIANLINP-----HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSP- 85
N I +T I+ + P+ R P KE L + P E + D + P
Sbjct: 35 NLLPIKVTRFFQQKIDEEVATLGHTEGPLHRMVYPTKERLLVCAPGEVAYFVDDRENMPE 94
Query: 86 -LKG-IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEK 141
G I+ +Y +R L C +C++CFR++++ Q T + K +Y+
Sbjct: 95 DAPGNIIQKYRNRALFMPTSTCVSHCQYCFRQDVLSEQHETGKTVLDKAILELDSYLSMH 154
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL 200
I EVI +GGDP+ L + LQ ++ ++ V+ +R H++ PQ + E ++ L
Sbjct: 155 PDIQEVILSGGDPMTLPMESLQSIISAIKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLL 214
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
AG + H HPYE E I R+ + GI +Q +L+ IND PE+L ++T
Sbjct: 215 ASAGVRLVF--HLTHPYELCEVVRKTIKRIQDTGIRCYNQFPILRQINDHPEVLRRHLKT 272
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI-SGLCQPFYILDLPGGYGK 319
L I+ + PD ++ F +++ + I+ L + S + +++D GK
Sbjct: 273 LDCLGIRNLSVFIPDPINFSALFSISLARLRNIINELNWRSPSWINSTRFVMDTKV--GK 330
Query: 320 VKI----DTHNIKKVGNGSYCITDHHNIVHDYP 348
V++ TH + G I + YP
Sbjct: 331 VRVRREDMTHYDAERG---IAIFERDGKTIHYP 360
>gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
HTCC2633]
Length = 481
Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 137/336 (40%), Gaps = 47/336 (13%)
Query: 21 KKEQIDEIKE--ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
E++DE++ ISN T +L + + EE+ L E DP
Sbjct: 61 SAEELDELEAAGISNRLPPRATGYYLDLAKRSTA---VKNLIKARPEEMEDLSGE-ADPS 116
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+SP+ G++H+Y + L+ ++ C +CR+C+R + + + G +S YI
Sbjct: 117 NQLKYSPIPGLLHKY-ELCLVYVVRTCSSWCRYCYRSDFLTGKTGKDTAS--IHEVKDYI 173
Query: 139 QEK------------SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ ++ EV+ +GGDP++LS++ L L L V+++R ++
Sbjct: 174 ETHNAKVERGEITHKPKVREVLLSGGDPMVLSNRNLFDYLNGLAEAG-VEVIRIGTKEMA 232
Query: 187 VDPQRINPELIQCLKEAG--KP---VYIAIHANHPYEF-------------------SEE 222
P+R + + L P V +H HP EF +
Sbjct: 233 FYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFTHPDEFLRLDVNGDYVRDERGRPLRNPL 292
Query: 223 AIAAISRLA-NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
A +RL + L +Q+ ++ G+NDD + L + + + + +Y G
Sbjct: 293 VEQAATRLRARPFVTLENQTPIIDGVNDDADALRLMQQELKRMGVNNHYFFQCREIEGFR 352
Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
F + +E+ K+ A + +SG+ + + L G
Sbjct: 353 AFAVPVEKAWKLHAESQHGLSGIERSRFALSTEAGK 388
>gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2]
gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
Length = 336
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 68/350 (19%)
Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
+ + + + +K+ + NLI+ +P DPI + I E P ++
Sbjct: 14 LSEAERERLKK-----HFRVNDYYLNLIDWDDPKDPIRKHLIAAAGE---APHGIQEFTW 65
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ G H Y +LL + +AYI
Sbjct: 66 EAA-----GCKHIYQSMVLLPVSQA---------------------------AEGIAYIA 93
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--LI 197
E ++I +V+ TG D L+L +L +++ LR I+H+ +R SR+P+ +P RI + L+
Sbjct: 94 EHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRLDSRMPVHNPMRIYEDHALL 152
Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ L + K +Y+ NHP E + EA A + L AG+++L+Q+ ++KG+N+DP +L
Sbjct: 153 KMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGVVVLNQTPIVKGVNNDPLLL 212
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQKIVASLKEKISGLCQ 306
L+ + + PY + + F + +++ +++ A L ++I L
Sbjct: 213 GKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSI-VQQAKELTAELGKRIRLLMA 271
Query: 307 PFYI----LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
Y LD+ G GK + H+ ++ G G + I+ D PP++S
Sbjct: 272 HDYGKVELLDIEG--GKAYVKYHHYQEEGKGRF-------IMLDCPPEAS 312
>gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces hygroscopicus ATCC 53653]
gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
[Streptomyces himastatinicus ATCC 53653]
Length = 362
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 84/320 (26%), Positives = 137/320 (42%), Gaps = 20/320 (6%)
Query: 33 NHYSIALTPVIANLINPHNPNDP-IARQFIPQKEELNILPEEREDPIGDNNHSP-----L 86
++ ++P + I P + Q++ E E + L
Sbjct: 7 GVFAEKISPYLRKKIEEAGEPLPFLDLQYVVDPSEAVEQTFEVARHYQSEMGTVFEGREL 66
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143
+G+ Y +L++ +C +CR+C R G T LS +D E Y +
Sbjct: 67 RGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQD 122
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ EV+ TGGDPLIL R++ +L L V+I+R +RVP+ DP+RI+ + L+
Sbjct: 123 VREVLVTGGDPLILID-RIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALRR 181
Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
V +A H NH E E A + L AG + Q+VLL+G+ND+ + L L
Sbjct: 182 RSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDEL 241
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL--KEKISGLCQPFYILDLPGGYGK 319
+ I+ +YL H G H R ++ EG ++ L SG +P + L GK
Sbjct: 242 RHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFT--LMTDVGK 299
Query: 320 VKIDTHNIKKVGNGSYCITD 339
V + +I + +
Sbjct: 300 VPLYEGSIIDRDEHNRILLQ 319
>gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 169
Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G +
Sbjct: 1 SAERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EID 59
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
S ++ +AA+ YI++ + +++ TGGDPL + L+ +L++LR I HV+I+R +R
Sbjct: 60 RPKSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTR 119
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
VP V PQRI L+ LK+ P++I +H NHP E + + A++ LANAG
Sbjct: 120 VPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169
>gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599]
gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 421
Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 21/359 (5%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K + +KE+ + E ++ +T A LI + ++P Q I
Sbjct: 16 KGFEEFATIVGFTEAEKEERGALLE-QSYMPFKVTRYYAELI--ASQSEPYRTQMI---N 69
Query: 66 ELNILPE-----EREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117
+ P R DP G+ ++ + H+Y +LL + C C+FC++ E+
Sbjct: 70 IVLPPPGVKPYKGRFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEI 129
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQ 176
G E A+ Y++ I V+FTGGDP L K++ TL +K ++
Sbjct: 130 RHEDIGYTNIMDKAERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIR 189
Query: 177 ILRFHSRVPIVDPQRINP-ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIAAISRLA 231
++RF ++ DP R EL+ + GK V + NHP E S+ +I A L
Sbjct: 190 LVRFATKALAYDPARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALL 249
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
+ G+ + Q +++G+ND E L +L R F++ RI YYL G + + ++E
Sbjct: 250 SVGVQIRGQPAIIRGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAF 309
Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
+ VA K + GL + +L +GK++I + H + DY P+
Sbjct: 310 RNVAESKRNLGGLEK-KGVLLTSHDFGKLEICGFYPTAERPEKIVLKWHQAVGPDYLPE 367
>gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 818
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 34/330 (10%)
Query: 7 TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIAN--LINPHNPNDPIARQFIP 62
++ L + + E++++ Y + L+ L++P +A Q++P
Sbjct: 121 SIGDVDQLVAKTNLMVPEAARTELQKVIETYPVRLSYHTIRQMLLSPD-----VAYQYMP 175
Query: 63 QKEELNILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
EEL DP+G N + Y +R++ L CPVYCRFCFR+
Sbjct: 176 FVEEL--------DPVGHTNTWIGQFHQGLLEQMYQNRVIFLLNMSCPVYCRFCFRKHK- 226
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
S+ + +D A+A++++ I E++ TGGDP L+ + + L I HVQ L
Sbjct: 227 ESRNEKNPTVEDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAIDGLMGIDHVQSL 285
Query: 179 RFHSRVPIVDPQRI---NPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAIS 228
R +R P+ + LK+ GK + IA H HP E S E++ I+
Sbjct: 286 RLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPDEVSPESLGIIT 345
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTI 287
L +GI + Q+ L+ ND L L R + +Y++ G S + +
Sbjct: 346 ELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSPIHGNSVYWSPL 405
Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGY 317
+G I L+ +S P P G
Sbjct: 406 SDGIDIAEYLRAHLSDRSVPKICTATPIGK 435
Score = 86.7 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 28/229 (12%)
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
EA + YI+ + I +VI L + ++ + I HV +R P+
Sbjct: 560 EADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRISLPEVNYAPES 619
Query: 192 INPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
I+P +IQ L + I + + +E A + RL N GI + + + LL
Sbjct: 620 ISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGITVYANTPLL 679
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ------------K 292
IND+P+ + NL + I+ ++L+ H I++
Sbjct: 680 GEINDNPDEIYNLTYAYRRAGIEFHHLYV------AGH---PIQKAWNEKHPIDMYDVVD 730
Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
I + ++ + SG P YIL P G + + I G+ + +
Sbjct: 731 IASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYD 779
>gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
HRM2]
Length = 819
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 46/375 (12%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
K T + L N I E +I ++ Y + + + +A Q++P KE
Sbjct: 124 KDKTQVERLANQV-IPPEDTADINQVIETYPVRFSMHTVRQMRVSKS---VACQYLPFKE 179
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
ELN + IG + + Y +R++ L CPVYCRFCFR+ S+
Sbjct: 180 ELNSV-GHTNTWIGQFHQG---LLEQMYQNRVIFLLNMTCPVYCRFCFRKHK-DSRNEKN 234
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
D A+A+++ I E++ TGGDP I + +++ ++ L+ I HV+ LR +R
Sbjct: 235 PGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHVETLRLATRSI 293
Query: 186 IVDPQRINPELIQCLK----------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
PQ + + L + GK + +A H HP E S ++++ IS L GI
Sbjct: 294 AYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLSIISDLVAGGI 353
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIV 294
+ Q+ L+G ND+ L L + + +Y++ G S + + +G +
Sbjct: 354 GVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIPCSPIHGNSVYWSPLSKGIQAG 413
Query: 295 ASLKEKISGLCQPFYILDLPGGY------G---------------KVKIDTHNIKK---- 329
L+ S P P G G + +
Sbjct: 414 RYLRAHASDRSIPRICTATPIGKMDWNTSGWAVEQDKENPDFIWLRTPYTPDYFNRFAPV 473
Query: 330 VGNGSYCITDHHNIV 344
+ + +
Sbjct: 474 ANDLEVIRRNDEGTI 488
Score = 65.5 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 19/195 (9%)
Query: 132 EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+A + YI+ + I++V+ DP+ S R++++ TL+ ++HV LR S + P
Sbjct: 564 DADIDYIKSQRDIFDVVLVSKTKDPVQ-SAARIRQLATTLKEVQHVNSLRIRSLDFVHHP 622
Query: 190 QRINPELIQCLKEAG-------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
L++ L V I E + L GI
Sbjct: 623 DTYTSGLVETLGRLNCLSVANPLRVEIETWVVCADELTPRQQQITQALYRRGITTYFNVA 682
Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLH------HPDLAAGTSHFRLTIEEGQKIVAS 296
L+ G+ND+ + + + T ++ ++++ + + +++ I
Sbjct: 683 LITGVNDNEDEIQKIAYTSRGFGMQFHHVYLAGLEIQNRMNGENK---VKVDDIFDIATR 739
Query: 297 LKEKISGLCQPFYIL 311
++ + SG P YI+
Sbjct: 740 VRREGSGREIPGYII 754
>gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 424
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/346 (22%), Positives = 137/346 (39%), Gaps = 47/346 (13%)
Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKE-- 65
S + + K Q D+ +SN + + + LI+ N DP+ R K
Sbjct: 10 SFKKTKYYGRLSKAQQDDFDLLSNIFYFKTNNYVLDQLIDWDNLETDPLFRLNFLHKNVL 69
Query: 66 -------------------------ELNILPEEREDPIGDN-----NHSPLKGIVHRYPD 95
EL + P + +KG+ + +
Sbjct: 70 SEADYQQLLSLYQAGASIEVLQPFIELIRKKTTPQIPYDEKCFPTAGGERIKGLYRSFNN 129
Query: 96 RILLK---LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
I L +L C YC +CFR S+ + S KD + + Y++ +I E +FTG
Sbjct: 130 VISLFPDPMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKANPEINETLFTG 189
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEA 203
DPL L+ ++++ + L I V +RF+++ P R EL + + +
Sbjct: 190 ADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNILELFKHIVAS 249
Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G+ + H H E + I A+ + G ++ Q +++GIND E NL V
Sbjct: 250 GRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIEDWVNLWSQEV 309
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
L ++PYY+ + FR+ + + I ++++ GL QPF
Sbjct: 310 ALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355
>gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
Length = 250
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 154 PLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP-----ELIQCLKE---A 203
PLI+ L++ ++ + I H++ +R ++ P R EL+ K+
Sbjct: 1 PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60
Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
G + H NH E ++E A+ ++ G ++ +QS +L+ IND+P++ A + + V
Sbjct: 61 GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+ + PYY+ +F + I +I +K+SGL + + GK++I
Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180
Query: 323 DTHNIKKVGNGSYCITDH 340
+ ++ Y + D
Sbjct: 181 L--GVSEINGKKYIVLDF 196
>gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 218
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEA 223
+R I HV+I+RF S++P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA
Sbjct: 1 MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
A L +AG+I+++Q+ +LKGINDDPE+LA L+ + PYY AG S F
Sbjct: 61 RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
LT+E+ +IV K + SGL + ++ + GK++I + NG + H
Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 172
>gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 141
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G+N
Sbjct: 1 PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
D+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG P
Sbjct: 61 DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120
Query: 309 YILDLPGGYGKVKIDTH 325
++ G K +D
Sbjct: 121 LAREIGGEPSKTPLDLQ 137
>gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 217
Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ + A A I I EV+ +GGDPL L+ +L ++ L I H++ LR
Sbjct: 142 AEE--TAARDGWREAGAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199
Query: 180 FHSRVPIVDPQRINPELI 197
HSR+PIV P+R++ L+
Sbjct: 200 IHSRLPIVLPERVDAPLL 217
>gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004]
gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii
SS-2004]
Length = 244
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ EVI +GGDPL+L+ +L + L ++R I+ ++R HSR +P RI LI+ LK+
Sbjct: 31 SVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETLKK 90
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H HP+E SEE A+ R+ +A I+ S L+GIND+ + L L
Sbjct: 91 YRIN-AFGVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFIDLY 149
Query: 263 ELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK-- 319
+ +KPYYL+H + G+S ++ +I + I++ LK +IS + P Y+ LP GK
Sbjct: 150 RMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYV--LPHMKGKFT 207
Query: 320 VKIDTH-----NIKKV-GNGSYCITDHHNIVHD 346
V + TH + + G Y + N +
Sbjct: 208 VPLFTHPQEMPYFETLNGKRYYRFINWQNEQCE 240
>gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
Length = 146
Score = 188 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236
+R HSR+P+V P RI E I+ + + + +H NH E + AIS++ NAGI
Sbjct: 1 MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+L+QSVLLKGIND + A L T + + PYYLH D G++HF + + + +
Sbjct: 61 VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120
Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
+ K+ G P + ++ K+ +
Sbjct: 121 MTAKLPGYLVPKLVREVAHEPSKITV 146
>gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
Length = 703
Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 703
Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 703
Score = 186 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
Length = 710
Score = 186 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 59/326 (18%)
Query: 5 HKTLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANLIN------PHNPN-D 54
H + SA DL + ++ + ++E I TP +LI+ NP D
Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281
Query: 55 PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILLK--- 100
R ++ ++L +I+ E+ED G+ N + P + RYP+ +
Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341
Query: 101 LLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTG 151
+ C C +C R + + K + L Y + +W+++ TG
Sbjct: 342 MGRACGGLCSYCQRMYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILITG 401
Query: 152 GDPLILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINP 194
GD + S K L+ +L + + ++ +R +++P+ PQR+
Sbjct: 402 GDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRVTA 461
Query: 195 ELIQCLKEAGKPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
EL+Q L + K + H + E + E A+ RL +G + +Q V
Sbjct: 462 ELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFTVA 521
Query: 247 INDDPEILANLMRTFVELRIKPYYLH 272
+ A L + ++ + PYY
Sbjct: 522 ASRRGHS-AKLRKVLNDIGVLPYYNF 546
>gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 697
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 195 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 254
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E NI E+ED + D + I RYPD +L + C
Sbjct: 255 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 314
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 315 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 374
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 375 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 434
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 435 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 494
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 495 T-AKLRKVLNGLGVLCYYTF 513
>gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 703
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
+L NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
Length = 576
Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 74 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 133
Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
+L NI E+ED + D + I RYPD +L + C
Sbjct: 134 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 193
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 194 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 253
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L
Sbjct: 254 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 313
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 314 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 373
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 374 T-AKLRKVLNGLGVLCYYTF 392
>gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510]
gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510]
Length = 703
Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ S +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
+L NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
Length = 233
Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 155 LILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---AG 204
+I++ ++ + L H++ +R ++ P R + EL+Q K+ +G
Sbjct: 1 MIMNASKIMHYISPLLEPEFDHIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSG 60
Query: 205 KPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
K + I H H E + AI ++ + G I+ SQS ++ IN++PE L V+
Sbjct: 61 KSLAIMAHFTHWRELEAPLTQVAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQ 120
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
L I PYY+ +F++ + E I ++SGL + + YGK+++
Sbjct: 121 LGIIPYYMFVERDTGSNRYFQVPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEVQ 180
>gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H]
gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H]
Length = 555
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 68/374 (18%), Positives = 133/374 (35%), Gaps = 59/374 (15%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEE 66
++ AN I I+E + Y T N I+ N D + + +PQ
Sbjct: 110 FRRVVEILVANNIDIGDIEERELFIEVYRFLATKHSLNSIDWTNFYEDSVFQLVMPQPNM 169
Query: 67 LN--ILPEEREDPIGD---------NNHSP---------------------LKGIVHRYP 94
+N + E + + SP L G H+YP
Sbjct: 170 INKITVAEYLAASVAEKKVIVEEYQEKTSPHDGNQQLNKPWFENEQGEIEFLDGSQHKYP 229
Query: 95 DRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
L+ K C +C +CFR V + + K+ + Y++ ++ +++ TGG
Sbjct: 230 QCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKEIDQIHRYLKVHEEVTDMLITGG 288
Query: 153 DPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-------ELIQCLKE 202
D + R ++ + L R + H++ +R +R P+ I + + +
Sbjct: 289 DGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKMLAVFDKMHD 348
Query: 203 AGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------D 249
G + H + P E + IAAI RL G+++ SQS ++ I+
Sbjct: 349 NGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHISLFENKDGSIDIDR 408
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
+ +L + I + ++ +F + +I + ++ + +P
Sbjct: 409 SAQNWIDLSNILGTMLISFHSMYCARPTGEHHYFTAPLSAVSQIFDKIYRELPSINRPSR 468
Query: 310 ILDLPGGYGKVKID 323
L + GK+ I
Sbjct: 469 HLSMTTSAGKISIM 482
>gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482]
gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 703
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ + +L N + +E + + + +TP +L+NP +D R +I
Sbjct: 201 AVKNPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260
Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
+L NI E+ED + D + I RYPD +L + C
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y + +Q +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQFRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +LK + + H +Q +R SR+P+ P RIN EL++ L
Sbjct: 381 QNKTLRNILKAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI ++ AG + +Q V +
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + L + YY
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519
>gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4]
gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
Length = 537
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 69/378 (18%), Positives = 131/378 (34%), Gaps = 70/378 (18%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELN------------- 68
++ + E+ Y T N IN + P D + + PQ +N
Sbjct: 108 DEREFFVEV---YRFLATRHSLNSINWDDYPTDSVFQLVFPQPGMINAETTQAYIDASDP 164
Query: 69 -----------------------ILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103
P D + L G H+YP L+ K
Sbjct: 165 KARTQVAIEYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 221
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C +CFR V + + KD Y++ ++ +++ TGGD + RL+
Sbjct: 222 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHKEVTDILITGGDGGYMPMSRLK 280
Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDP-------QRINPELIQCLKEAGKPVYIAIHA 213
+ + L HV+ +R +R P + EL +++ G + H
Sbjct: 281 QYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPMLELFDTMRDNGVQLAWMAHF 340
Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260
+ P E + +AAI RL N G+ + SQS ++ I+ + +L
Sbjct: 341 STPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHISLFMDDKGGVDVERSSQSWIDLSNI 400
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
L I + ++ ++ + + KI + ++ + +P + + GK+
Sbjct: 401 LGMLCIGFHSMYCARPTGEHHYYTAPLADMSKIFNRIYRSLASINRPSRHISMTISAGKL 460
Query: 321 KIDTHNIKKVGNGSYCIT 338
I +I G + +
Sbjct: 461 AILGTSIVN-GEKCFALQ 477
>gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
Length = 697
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + + TP +L+N P+ +D R +I
Sbjct: 201 AIKSPTELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTPNGYDDEALRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E + Y +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRRLMNYFEEDAQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
K+ + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 441 KKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIHKLLSAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + +L + YY
Sbjct: 501 T-ARLRQILNQLGVVCYYTF 519
>gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola]
gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola]
Length = 144
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 78/140 (55%)
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
H+R+PIV P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+
Sbjct: 1 IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
QSVLLK IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L +
Sbjct: 61 QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120
Query: 300 KISGLCQPFYILDLPGGYGK 319
ISG P + D K
Sbjct: 121 MISGFLVPRLVFDNGSKDNK 140
>gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3]
gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 493
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/378 (17%), Positives = 132/378 (34%), Gaps = 70/378 (18%)
Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNIL----------- 70
++ + E+ Y T N IN + P D + + PQ ++
Sbjct: 66 DERELFVEV---YRFLATRHTLNSINWDDYPTDSVFQLVFPQPGMIDEQTTQQYVGSPDA 122
Query: 71 -------------------------PEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103
P D + L G H+YP L+ K
Sbjct: 123 KARTQVAIDYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 179
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C +CFR V + + KD Y++ ++ +++ TGGD + RL+
Sbjct: 180 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHPEVTDILITGGDGGYMPVSRLR 238
Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDPQRINP-------ELIQCLKEAGKPVYIAIHA 213
+ + L HV+ +R +R P+ + EL +++ G + H
Sbjct: 239 QYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPMLELFDTMRDNGVQLAWMAHF 298
Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260
+ P E + IAAI RL N G+ + SQS ++ I+ + +L
Sbjct: 299 STPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHISLFKDEAGNVDVERSSQNWIDLATI 358
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
+ + + ++ ++ + + KI + ++ + +P + + GK+
Sbjct: 359 LGMMCVGFHSMYCARPTGEHHYYTAPLADMGKIFNRIYRSLASINRPSRHISMTISAGKL 418
Query: 321 KIDTHNIKKVGNGSYCIT 338
I ++ G + +
Sbjct: 419 AILGTSVVN-GEKCFALQ 435
>gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 707
Score = 179 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ SA +L + E + ++ + +TP +L+NP +D R ++
Sbjct: 200 AVKSAAELNRMLGGTLSGETMRVYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259
Query: 62 PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
L I ERED + + + I RYP+ +L + C
Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + ++ + Y + +QI +++ TGGD L+
Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+ +L + + +Q +R +R+P+ P R++ EL+ L
Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
++ + +++ H P E + E+ AI R+ + G + +Q V +
Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308
A L + L + YY + ++ + + + S +EK G P
Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556
Query: 309 YILDLPGGYGK 319
++ L G K
Sbjct: 557 FLESLGGAPDK 567
>gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 707
Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ SA +L + E + ++ + +TP +L+NP +D R ++
Sbjct: 200 AVKSAAELNRMLDGTLSGETLRIYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259
Query: 62 PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
L I ERED + + + I RYP+ +L + C
Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + ++ + Y + +QI +++ TGGD L+
Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+ +L + + +Q +R +R+P+ P R++ EL+ L
Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
++ + +++ H P E + E+ AI R+ + G + +Q V +
Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308
A L + L + YY + ++ + + + S +EK G P
Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556
Query: 309 YILDLPGGYGK 319
++ L G K
Sbjct: 557 FLESLDGAPNK 567
>gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057]
gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057]
Length = 698
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 120/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ S +L N + E + + + TP +L++ +D R +I
Sbjct: 201 AVKSPAELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDCTGSGYDDEALRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIHAWEREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E +AY +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIKH-----------------VQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMASRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + +L + YY
Sbjct: 501 T-TRLRQILNQLGVVCYYTF 519
>gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 125
Score = 177 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 64/120 (53%)
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LANL +
Sbjct: 2 QILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAG 61
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
+ PYYLH D G +HF +T +E ++I+ L +SG P ++ G K +D
Sbjct: 62 VMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLDLQ 121
>gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565]
gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565]
Length = 713
Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEI-SNHYSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLHRARKKRMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + E L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWERKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+P P RIN EL++ L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLDRPEGEKYAELQRVRLGSRLPAYLPMRINDELVEIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAAGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVMCYYTF 524
>gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 720
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 208 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 388 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526
>gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14]
gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14]
Length = 718
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 717
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL+ L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19]
gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19]
Length = 704
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559
>gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 704
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559
>gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12]
gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 699
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
+ + +L N + E + + TP +L+N + ND R +I
Sbjct: 203 AIKTPAELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTNGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC
8503]
gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 704
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559
>gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7]
Length = 706
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 211 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 270
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 271 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 330
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 331 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 390
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 391 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 450
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 451 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 510
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 511 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 561
>gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
DSM 18315]
Length = 703
Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 112/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
S +L + +D + +TP +L+N + +D R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EEL E+ED + + I RYP+ +L + C
Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L +L + + +Q +R SR+ P RI EL+ L
Sbjct: 388 QNATLCNILDAVYKMAVRKRKANESRPKGEKYAELQRVRLGSRLLAYLPLRITDELVDIL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ I H P E + EA AI + +AG I+ +Q V +
Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQMVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L +T + + YY
Sbjct: 508 A-AKLRQTLNAMGVVCYYTF 526
>gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 704
Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559
>gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
Length = 712
Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 121/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN EL++ L
Sbjct: 386 QNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVEIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 154
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
+ K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP
Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ ELN D + + + G H+Y LL + VC YCRFCFR+ + S
Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+S D + YI + +I V+ TGGD LIL+ K+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKK 153
>gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301]
Length = 699
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYN--ANLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L A + E + + + TP +L++ +D R +I
Sbjct: 203 AVKSPSELNRFLAGSLSSETMYLLSKARKKGMPFFATPYYLSLLDVTGGGYDDAAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + I RYP+ +L + C
Sbjct: 263 LYSPQLVETYGQIRAWEREDVVEAGRPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ T+ + + + Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFETLRPKESWDHKLRRLMNYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+P P R+N EL++ L
Sbjct: 383 QNKTLRNILEAVCRMAGRKRRANARRPDGEKYAELQRVRLGSRLPAYLPMRVNDELVEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG ++ +Q V +
Sbjct: 443 REFHEKASAVGVKQFVIQTHFQTPLEVTPEAEEAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343]
gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 699
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ + +L N + E + + TP +L+N ND R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + ++Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 699
Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ + +L N + E + + TP +L+N ND R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + ++Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R]
Length = 699
Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ + +L N + E + + TP +L+N ND R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + ++Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46]
gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 699
Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ + +L N + E + + TP +L+N ND R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + ++Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 699
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ + +L N + E + + TP +L+N ND R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI ERED + + I RYP+ +L + C
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + ++Y +E +Q+ +++ TGGD L+
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L+ + + +Q +R SR+ P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + AI ++ +AG ++ +Q V +
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521
>gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3]
gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3]
Length = 704
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)
Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
+ S +L + E + + +TP +L I +D R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EL E+ED + + + I RYP+ +L + C
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ + + + + Y +E +Q+ +++ TGGD L+
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+K+L+ + + +Q +R SR+ P R+ EL+ L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448
Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + YI H P E + EA AI + AG + +Q V +
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRKGH 508
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
A L +T L + YY + ++ + +++E ++ + ++
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559
>gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
43184]
Length = 703
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 113/320 (35%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
S +L + +D + +TP +L+N + +D R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267
Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
EEL E+ED + + I RYP+ +L + C
Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKETWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+ L+ +L + + +Q +R SR+ P RI EL+ L
Sbjct: 388 QNATLRNILDAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRITDELVGIL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+ I H P E + EA AI + +AG I+ +Q V +
Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L +T + + YY
Sbjct: 508 T-AKLRQTLNAMGVVCYYTF 526
>gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
17393]
Length = 697
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%)
Query: 9 TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61
S +L N + E + + +TP +L+NP ND R +I
Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261
Query: 62 -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108
PQ E I ERED + + I RYP+ +L + C
Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321
Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159
C C R S + ++ + E L Y +E +Q+ +++ TGGD L+ +
Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKETWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381
Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202
K L +L+ + + +Q +R SR+P P RIN EL++ L+
Sbjct: 382 KTLNTILEAIYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441
Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ I H P E + EA I +L +AG ++ +Q V +
Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500
Query: 255 ANLMRTFVELRIKPYYLH 272
L + EL + YY
Sbjct: 501 TRLRQVLNELGVVCYYTF 518
>gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23]
gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23]
Length = 713
Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 208 AIKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526
>gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
DSM 14838]
Length = 697
Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%)
Query: 9 TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61
S +L N + E + + +TP +L+NP ND R +I
Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261
Query: 62 -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108
PQ E I ERED + + I RYP+ +L + C
Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321
Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159
C C R S + ++ + E L Y +E +Q+ +++ TGGD L+ +
Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381
Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202
K L +L+ + + +Q +R SR+P P RIN EL++ L+
Sbjct: 382 KTLNTILEAVYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441
Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
+ I H P E + EA I +L +AG ++ +Q V +
Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500
Query: 255 ANLMRTFVELRIKPYYLH 272
L + EL + YY
Sbjct: 501 TRLRQVLNELGVVCYYTF 518
>gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
43183]
Length = 699
Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 73/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ S +L N + E + + TP +L+N ND R +I
Sbjct: 201 AVKSPTELNRFLGNSLSVETMYLLSRARKKGMPFFATPYYLSLLNCTGSGYNDDSLRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S + + + + L Y +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L+ +L + + +Q +R SR+P P RIN EL+ L
Sbjct: 381 QNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINDELVDIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L +AG ++ +Q V +
Sbjct: 441 REFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIRKLLSAGWLITNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
A L + +L I YY
Sbjct: 501 T-ARLRQVLNKLGIICYYTF 519
>gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
Length = 711
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2]
Length = 711
Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 713
Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526
>gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
Length = 711
Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 713
Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526
>gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 698
Score = 168 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 116/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ S +L N + E + + + TP +L+N +D R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E + Y +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMDYFEEDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L + + +Q +R SR+P P RIN L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + +L + YY
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519
>gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
Length = 698
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 116/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ S +L N + E + + + TP +L+N +D R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E +AY +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L + + +Q +R SR+P P RIN L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E I H P E + EA I +L AG ++ +Q V +
Sbjct: 441 REFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + +L + YY
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519
>gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36]
gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36]
Length = 698
Score = 167 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
+ S +L N + E + + + TP +L+N +D R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E I ERED + + I RYP+ +L + C
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320
Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S + T+ + E +AY +E +Q+ +++ TGGD L+
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L + + +Q +R SR+P P RIN L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA I +L AG ++ +Q V +
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + +L + YY
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519
>gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A]
Length = 713
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712]
Length = 431
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/349 (20%), Positives = 121/349 (34%), Gaps = 54/349 (15%)
Query: 26 DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEELNILPE----------- 72
E + + +T +A+ L++ P+DP+ R +P + L
Sbjct: 24 HEAEVVGQVLPFRVTSHVADELVDWTRAPDDPLYRLVMPHRGLLAPADFAAVERSLRDGD 83
Query: 73 ------------EREDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMV 118
ER DP G+ HRYP+ +L+ C C C R
Sbjct: 84 RDRLRLVVDGLRERLDPHPAGRD--AAGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRF 141
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI---------------LSHKRLQ 163
EA + +I +V+F G P L RL
Sbjct: 142 AGDPVRGRELGGPEALGDRLDRHPEITDVLFAGV-PFAGGSGADPPDPPDPFELRTARLA 200
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
+ L V+ +R +R P R L++ + +G+ + + ++ H
Sbjct: 201 PYVTALLDRPGVRTVRIVTRAVSRFPGRFLDAPDADDLLRLLERVVASGRHLVLTLYVCH 260
Query: 216 PYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
P E A A+ RLA G +L ++ +L+ +NDD + A + R L + PY +
Sbjct: 261 PRELRPATARRALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVE 320
Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
FRL + ++ A ++ GL +P G + +D
Sbjct: 321 RGGGVRRCFRLPLARVLEVHAEALRRVPGLAGRVCGPVMPTELGVLAVD 369
>gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a]
gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 712
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22]
gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22]
Length = 713
Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + TP +L+N + ND R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
P+ E NI E+ED + + I RYP+ +L + C
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K LQ +L + + +Q +R SR+ P RIN L+ L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E K I H P E + EA AI ++ +AG I+ +Q V +
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524
>gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5]
Length = 698
Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 55/320 (17%)
Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
+ S +L N + E + + + TP +L++ D R +I
Sbjct: 202 AVKSPSELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDVTGKGYGDEAIRSYI 261
Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
PQ E +I E+ED + + I RYP+ +L + C
Sbjct: 262 LYSPQLVETYGSIRAWEKEDVVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 321
Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+
Sbjct: 322 GLCASCQRMYDFQSERLNFEFESLRPKESWDHKLRRLMTYFEEDTQLRDILITGGDALMS 381
Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
+K L +L+ + + +Q +R SR+P P RI+ L++ L
Sbjct: 382 QNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQRVRLGSRLPAYLPMRIDDGLVEVL 441
Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+E + I H P E + EA AI R+ AG ++ +Q V +
Sbjct: 442 REFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRRILAAGWLVTNQLVYTVAASRRGH 501
Query: 253 ILANLMRTFVELRIKPYYLH 272
L + L + YY
Sbjct: 502 T-TRLRQVLNALGVVCYYTF 520
>gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 123
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 65/123 (52%)
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L
Sbjct: 1 MRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSE 60
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ PYYLH D AG +HF + + + L ++SG P + ++PG GK
Sbjct: 61 RSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120
Query: 320 VKI 322
+
Sbjct: 121 RPL 123
>gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 105
Score = 152 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GDPL+ L +L L IKHV+ LR HSR+PIV P RI EL+ ++ + +
Sbjct: 1 GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LA
Sbjct: 61 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104
>gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 202
Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D
Sbjct: 9 IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68
Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
PGG GK+ + + + + + ++ YP S
Sbjct: 69 APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108
>gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437]
Length = 189
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
D+ I +E+ +++ +I+N + L +LI+ ++PNDPI + IP + EL+
Sbjct: 19 DIRKIQEIPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDE--Y 76
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+ D + + + G H+Y LL + VC YCRFCFR+ + + +S D
Sbjct: 77 GKWDASDEYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVA 134
Query: 133 AALAYIQEKSQIWEVIFTGG---DP 154
+ YI++ QI V+ TGG DP
Sbjct: 135 PGVEYIRKNPQINNVLLTGGRLPDP 159
>gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437]
Length = 187
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 190 QRI--NPELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
RI + EL+ L E +++ H NHP E +++A AI L AG+IL++Q+ +L
Sbjct: 1 MRIYEDKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVL 60
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
KGINDDPEILA L+ + PYY AG + F LT E +++ K + SGL
Sbjct: 61 KGINDDPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGL 120
Query: 305 CQP-FYILDLPGGYGKVKI 322
+ Y + GK++I
Sbjct: 121 GKRIRYA--MSHSTGKIEI 137
>gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 107
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
E S + +L+ GI LL+QSVLL+G+ND E LA L + + PYYLH D
Sbjct: 1 REISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDR 60
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
G +HF L + Q+I +L + G P + + G K +
Sbjct: 61 VDGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106
>gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
Length = 153
Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
+ ++ +L ++ E++ + + + + + + +PNDP+ Q +
Sbjct: 21 QAISDPVELLQLLALEHHEELQKGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAN 80
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E I P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR +
Sbjct: 81 AEFTITPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137
Query: 125 VLSSKDTEAALAYIQE 140
+ + + A+ YI++
Sbjct: 138 KGNKANWQKAIEYIKK 153
>gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
Length = 105
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
+ A+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G
Sbjct: 1 DQIFTNAMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQG 60
Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
SHF ++ E +I +L+ SG P ++ G K
Sbjct: 61 ASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 101
>gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum]
Length = 276
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 33 NHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELNILPEER--------EDP--IGD 80
Y + +A NLI+ N P+DP+ R PQ L+ DP I +
Sbjct: 46 EVYPFRVNSHVAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIRE 105
Query: 81 N-----------------------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRR 115
+ P G+ H+Y + +L L VC YC +CFR
Sbjct: 106 EARKIQLRQNPNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRW 165
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ ++ E + Y+++ ++ +VIFTGGDP+++S ++K+ T +
Sbjct: 166 PQFSGVENLKFANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221
>gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 237
Score = 112 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
+P E+ +P D +GD G++ +Y R LL C V+CR+CFRR
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141
Query: 120 SQKGTVLSSKDTEA 133
+++ +
Sbjct: 142 AEE--TAARDGWRE 153
>gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 81
Score = 106 bits (266), Expect = 5e-21, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++E I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++
Sbjct: 1 SQDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAEN 59
Query: 123 GTVLSSKDTEAALAYIQEKSQIWE 146
+ ++ + AL Y+ ++ E
Sbjct: 60 QG--NKRNWQTALEYVAAHPELDE 81
>gi|325918736|ref|ZP_08180828.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
gi|325535030|gb|EGD06934.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
Length = 130
Score = 88.2 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
Q + + + + L + + E + + + + + + +DP+ RQ
Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAGISAEAAAQFPLRVPQAFVARMRHGDLHDPLLRQ 81
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
+P E+ +P D +GD G++ +Y R LL C V+
Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVH 130
>gi|227357433|ref|ZP_03841787.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227162391|gb|EEI47391.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 63
Score = 87.1 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
PYYLH D G +HF + E ++I+ SL +SG P ++ G K +D
Sbjct: 1 MPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLDL 58
>gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
Length = 309
Score = 85.2 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 18 NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72
++ +E I+++KE +++ P + ++I+ NP DPI RQFIP K +L P+
Sbjct: 211 GIVTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPK 270
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLK 100
D + +++ SP++G VHRY D+ L
Sbjct: 271 VELDSLHESDDSPVEGFVHRYYDKALFL 298
>gi|163784746|ref|ZP_02179552.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879987|gb|EDP73685.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
Length = 115
Score = 80.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
Q+ ++ LT+ +++ + KE + + + TP +LI + ++PI +Q
Sbjct: 28 WQIANR-LTTLEEIKKIFPVSKELETAFLKTTEIFHFGTTPYYLSLIKEFSYDNPIFKQV 86
Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPL 86
P +E++ EDP ++ SP+
Sbjct: 87 FPSLDEIDKEKQKYSYEDPFLEDTLSPV 114
>gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 67
Score = 80.2 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
+ NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL +
Sbjct: 9 FIARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVK 67
>gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
Length = 456
Score = 76.3 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 41/184 (22%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
H C C FCF +M + T+ Y ++ + F G+ + L++
Sbjct: 88 YHSCRNRCIFCFIDQMPPGMRKTL-----------YFKDDD--TRLSFLQGNYVTLTN-- 132
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFS 220
+ + QILR+H + Q +NP+L + L F+
Sbjct: 133 -------IGEMDMEQILRYHLSPINISFQTMNPQLRCKMLG---------------NRFA 170
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
EA+ + RLA AGI + Q VL KG+ND E+ ++ + R PY + G
Sbjct: 171 GEALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGL 227
Query: 281 SHFR 284
+ FR
Sbjct: 228 TRFR 231
>gi|262189696|ref|ZP_06048065.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
gi|262034425|gb|EEY52796.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
Length = 51
Score = 69.0 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
G +HF ++ ++ ++I+A L E++SG P ++ G K +D H
Sbjct: 2 QGAAHFYVSDDKARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 49
>gi|167947613|ref|ZP_02534687.1| hypothetical protein Epers_14147 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 119
Score = 68.2 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 7 TLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
T Q L+ + + + + + + A L+ +P DP+ RQ +P +
Sbjct: 4 AFTHPQALFEFLQLDPGPAAWRALQAATTFPLRVPLGYAALMRKGDPADPLLRQVLPLAQ 63
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDR-ILLKLLHVCPVYC 109
EL +P+GD+ P + + +CP C
Sbjct: 64 ELQDQAGFDTNPVGDSAGRGTARSAAEVPGTSAIDRHWRLCPFNC 108
>gi|169626132|ref|XP_001806468.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
gi|111055211|gb|EAT76331.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
Length = 243
Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DLAAGTSHF 283
AAI L G+ + + + LL G+ + + L+ + I PY H A
Sbjct: 75 AAIDHLFQHGVTVPNLTRLLSGVEEQASDMRELINKLSGIHIVPY--HVCLHEACEGEDL 132
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
+ + ++ ++ I P + DLP G GK
Sbjct: 133 CVPLSVALQLEKEIRGPILDYQMPKLVADLPNGGGK 168
>gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
Length = 322
Score = 67.4 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C G LS+ + EAA+ + ++ TGG+P + S
Sbjct: 15 LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGT-QKIRLTGGEPGLRS 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV-YIAIHA 213
L +++ L I + + PQRI L + +
Sbjct: 74 D--LPEIIYRLNRIDGINNI-----AVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDSST 126
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELR 265
H E + E + +++ G+ + +VL+KG+NDD +L L +T V LR
Sbjct: 127 FH--EITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLR 182
>gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1]
gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1]
Length = 465
Score = 67.1 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 76/206 (36%), Gaps = 50/206 (24%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 82 LMSEYRSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
K + +I+RFH + Q +NP+L + L
Sbjct: 132 KDKDFE------------RIIRFHLAPINISVQTMNPKLRCRMLN--------------- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ EA+ I RL AGI + Q VL KG+ND E+ ++ R PY +
Sbjct: 165 NRFAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVV 221
Query: 277 AAGTSHFR---------LTIEEGQKI 293
G S +R E GQ I
Sbjct: 222 PVGLSRYREGLYPLEPFTPEECGQAI 247
>gi|229004622|ref|ZP_04162360.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
gi|228756663|gb|EEM05970.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
Length = 177
Score = 65.5 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 38/138 (27%)
Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQ 63
T ++ +++ N I + EI+ I + + NLI+ N PNDP+ + P
Sbjct: 14 YTTSNFKNIPQLNEISPHLMKEIEVIGSVLPFKVNSYYLNNLIDWGNVPNDPMFQLVFPN 73
Query: 64 KEE-------------------------------LNILPEERED---PIGDNNHSPLKGI 89
++ LN P + + PI + N LKGI
Sbjct: 74 RKMIEEEDYIKLESSIDTGDKALKKELVENIIKKLNPHPGGQMELNVPIVEENA--LKGI 131
Query: 90 VHRYPDRILLKLLHVCPV 107
H+Y + +L V PV
Sbjct: 132 QHKYNETVLFFQKKVKPV 149
>gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
Length = 320
Score = 64.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 94 PDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEV 147
P ++L + L C + C FC M ++ L + E Y++ K + +V
Sbjct: 9 PLKVLRISLTDRCNLRCNFC----MPPGKEYNFLPKRQLLTPEEIEEYVKIFAKLGVEKV 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
TGG+PL+ L+++++ + ++ ++ + + + +R ++ LKEAG K
Sbjct: 65 RLTGGEPLLRED--LEEIIQRISKVEGIKDIALTTNG-VFLKER-----LKALKEAGLKR 116
Query: 207 VYIAIHANHP--------YEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ +++H+ +P + E I R G + SV++KG NDD + +L
Sbjct: 117 ITVSVHSLNPEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD--EILDL 174
Query: 258 MRTFVELRI 266
R F L +
Sbjct: 175 ARFFKNLGV 183
>gi|157694065|ref|YP_001488527.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
SAFR-032]
gi|157682823|gb|ABV63967.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
SAFR-032]
Length = 335
Score = 63.6 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 37/192 (19%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD 130
D I D H PL+ + + + C C +C E+ G K +LS ++
Sbjct: 2 DSILDKRHRPLRDLR--------ISVTDRCNFRCTYCMPAEIFGPDYPFLNKEELLSFEE 53
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV 187
E + + ++ TGG+PL+ L +++ L I ++ + + +P+
Sbjct: 54 IEQLATLFAKDLGVVKIRITGGEPLLRKD--LPILIEKLSNIPGIEDIAMTTNGTLLPVY 111
Query: 188 DPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAISRLANAGIIL 237
LK+AG V I++ + +P F ++ I AG+ +
Sbjct: 112 ---------ADKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGIEAAKKAGLAI 162
Query: 238 LSQSVLLKGIND 249
V+ KG+ND
Sbjct: 163 KINMVVQKGVND 174
>gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
obeum A2-162]
Length = 460
Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C +C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 83 LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 129
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + +++++H V Q +NP+L + L H
Sbjct: 130 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPKLRCKML-----------H---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
F+ +A+ + RL AGI + Q VL KG+ND E+ +L
Sbjct: 166 NRFAGDALKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSLRE 208
>gi|332702939|ref|ZP_08423027.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
str. Walvis Bay]
gi|332553088|gb|EGJ50132.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
str. Walvis Bay]
Length = 345
Score = 60.5 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 28/166 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +CF +++ ++L ++ + + ++ I +V TGG+P +
Sbjct: 26 LSVTDRCNLRCAYCFSKDIRFIDHQSILRYEELLTIVD-LAKELGIRKVRLTGGEPFVRK 84
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN---- 214
+++ + LR + + ++ LKE G H N
Sbjct: 85 D--FLWLVEHILARHPELDLRITTNA------TLLAGKVRTLKELG-----VTHLNVSLD 131
Query: 215 ----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+F + +A+ + GI L +V ++G+NDD
Sbjct: 132 TLDPRKFVDITGRDFFRQVRSALDEVMAEGIKLKVNAVAMRGVNDD 177
>gi|66576257|gb|AAY51688.1| MiaB-like tRNA modifying enzyme [Chlorobium tepidum TLS]
Length = 446
Score = 60.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 81/229 (35%), Gaps = 50/229 (21%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN----PND--PIARQFIPQKEELNIL 70
+ ++I +IK +S + + T I ++ PND P+ + P + +
Sbjct: 81 YAQLDPKRIADIKGVS--FVLGTTDKFE--IAWYDGESLPNDSEPLVK-VSPVDKAITAH 135
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGT 124
P + R LK+ C C +C R V
Sbjct: 136 PACSMLSQPEKG-----------RTRAFLKIQDGCSFGCAYCSIPLARGRSRSVSLSTVL 184
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
+ K +A E++ TG GD RL +L+ L I V +R
Sbjct: 185 DRAQKIADAGY---------REIVLTGINIGD-YQDGDTRLSGLLRRLETID-VSRIRIS 233
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISR 229
S V+PQ ++ ELI + +GK I H + P + + + A+ R
Sbjct: 234 S----VEPQLLDDELIDIVAASGK---IMPHFHLPLQSGSDTVLRAMRR 275
>gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
Length = 468
Score = 59.7 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C +C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 91 LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 137
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + +++++H V Q +NP+L + L H
Sbjct: 138 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPQLRCKML-----------H---- 173
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
F+ +A+ + +L AGI + Q VL KG+ND E+ +L +
Sbjct: 174 NRFAGDALKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216
>gi|225570487|ref|ZP_03779512.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM
15053]
gi|225160684|gb|EEG73303.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM
15053]
Length = 435
Score = 59.7 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M G + T+ D ++ L+++Q + T +
Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPGGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S ++ +I+ +H + NPEL + L H
Sbjct: 132 SDHDIE------------RIVTYHLEPINISFHTTNPELRCKML-----------H---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ +A+ + RL GI + Q VL KGIND E+ ++ R PY +
Sbjct: 165 NRFAGDALRKVDRLYEGGITMNGQIVLCKGINDGEELERSIRD---MSRYLPYLQSVSVV 221
Query: 277 AAGTSHFR 284
G + +R
Sbjct: 222 PVGLTKYR 229
>gi|163785257|ref|ZP_02179923.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159879475|gb|EDP73313.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 105
Score = 59.0 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
M+ + T S +D+ + ++QI +I+ +S + + + LIN NP DPI
Sbjct: 1 MRYKTYTAKSFKDIPQVKKYLTEQQIFDIEVVSRVFPFKVNNYVIEKLINWGNPLEDPIF 60
Query: 58 RQFIPQKEELNILPEER 74
R PQ+ L +
Sbjct: 61 RLTFPQRGMLQDEDYYK 77
>gi|253578392|ref|ZP_04855664.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850710|gb|EES78668.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 460
Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C +C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 83 LMDEYRSCSNHCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S L +I++FH V Q +NP+L + L H
Sbjct: 133 SDYDLD------------RIIKFHLSPINVSFQTMNPKLRCKML-----------H---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
F+ +A+A + RL + + Q VL KGIND E+ +L
Sbjct: 166 NRFAGDALAKVDRLYKGDVTMNGQIVLCKGINDRDELEYSL 206
>gi|94985862|ref|YP_605226.1| molybdenum cofactor biosynthesis protein A [Deinococcus
geothermalis DSM 11300]
gi|94556143|gb|ABF46057.1| Molybdenum cofactor biosynthesis protein A [Deinococcus
geothermalis DSM 11300]
Length = 333
Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C E+ G + +L+ ++ E + ++ TGG+
Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPRTELLTFEEIERLARAF-VDLGVRKLRLTGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKE---------- 202
PL+ L +++ L I V+ + + + P R+ +L + LK
Sbjct: 74 PLLRRD--LPELVARLGRIAGVEDIALTTNGLL-LP-RLAADLQRAGLKRVTVSLDSLDP 129
Query: 203 --AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
G+ + +H P + AA+ AG+ + +V+ +G+ND E L L
Sbjct: 130 EVFGRMNGLNVH---PQRVLDGIEAALQ----AGLSVKVNTVVQRGVND--EGLRELWLA 180
Query: 261 FVE 263
E
Sbjct: 181 LRE 183
>gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp.
SR1/5]
Length = 462
Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 85 LMDDYRSCSNKCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 131
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + +++R+H + Q +NPEL + L H
Sbjct: 132 TNMSEKDI---------ERVIRYHLEPINISFQAMNPELRCKML-----------H---- 167
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
F+ +A+ + L NAGI + Q VL KG+ND E+ +L
Sbjct: 168 NRFAGKALDKVDMLYNAGITMNGQIVLCKGVNDGDELEYSL 208
>gi|254302942|ref|ZP_04970300.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323134|gb|EDK88384.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 435
Score = 57.0 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK+++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFKEKDNFESLLEEILKIKNLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|291519254|emb|CBK74475.1| RNA modification enzyme, MiaB family [Butyrivibrio fibrisolvens
16/4]
Length = 382
Score = 56.7 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D E + + + EV+ TG
Sbjct: 88 HTRAFVKVQDGCNQFCSYC-----IIPFARGRIRSRDIEDVVEEVTGLATNGYKEVVITG 142
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ L +L+ + I V+ +R S ++PQ + E + + K
Sbjct: 143 IHLSSYGNGTDYNLADLLEAIEKIDGVERIRLGS----LEPQIVTEEFAKRVSALSK--- 195
Query: 209 IAIHA 213
+ H
Sbjct: 196 MCPHF 200
>gi|256845484|ref|ZP_05550942.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
3_1_36A2]
gi|256719043|gb|EEU32598.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
3_1_36A2]
Length = 435
Score = 55.9 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|237742211|ref|ZP_04572692.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13]
gi|229429859|gb|EEO40071.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13]
Length = 435
Score = 55.9 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|14520767|ref|NP_126242.1| molybdenum cofactor biosynthesis protein a related [Pyrococcus
abyssi GE5]
gi|5457983|emb|CAB49473.1| mooA-like molybdenum cofactor biosynthesis protein A related
[Pyrococcus abyssi GE5]
Length = 419
Score = 55.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142
G++ R + I ++ C + C FC E S+ + D + L + ++
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWVAKEKGK 167
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + G+PL+ + ++++ LR HV ++ S + +N +L++ L E
Sbjct: 168 GLEAHLDAQGEPLLYP--FIVELVQALREHPHVSVISMQSNGVL-----LNDKLVEELAE 220
Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
AG V ++IH NH E +E L NAGI +L V++
Sbjct: 221 AGLDRVNLSIHSLDPEKAKMLMGIKDYDLNHVLEMAEA-------LVNAGIDVLIAPVIM 273
Query: 245 KGINDD 250
G+NDD
Sbjct: 274 FGVNDD 279
>gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 318
Score = 55.1 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
+ L C + C +C + V + V+ ++ + I ++ +TGG+PLI
Sbjct: 14 ISLTDRCNLRCIYCMPEQGVSKKCHEDVIRFEEVLKIIK--SAVPLGIKKIRYTGGEPLI 71
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L + + ++ I+ ++ + + ++ +L LKEAG + I +
Sbjct: 72 LKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKEAGLK-RVNISLDTL 122
Query: 217 YE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + + + AI + + GI + +VL+KGINDD
Sbjct: 123 KEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 166
>gi|262376486|ref|ZP_06069715.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
SH145]
gi|262308625|gb|EEY89759.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
SH145]
Length = 341
Score = 54.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + A ++ I ++ TGG+PL+
Sbjct: 26 ISVTDRCNFKCSYCMPEHPQWMNKKDLLSFEALYAFCEFMVRH-GIEQIRVTGGEPLM-- 82
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
+ + + L+ +K + + R + + Q LK AG + I++ + P
Sbjct: 83 RQGIIHFIARLQTLKAIGLKRIS----MTSNGHYLADYAQPLKRAGLDDLNISLDSLDPK 138
Query: 218 EFSEEAIAAIS-------RLANAGIILLSQSVLLKGINDD 250
+F + + AG+ + SVL+KGIND+
Sbjct: 139 QFQQLTQKQLQPVLQGISAAQQAGLTVKINSVLIKGINDN 178
>gi|294785210|ref|ZP_06750498.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27]
gi|294486924|gb|EFG34286.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27]
Length = 435
Score = 54.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|317497456|ref|ZP_07955776.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895242|gb|EFV17404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
5_1_63FAA]
Length = 440
Score = 54.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E D D + L + R +K+ C +C +C G + + ++
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185
Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + I + T G D L L +L+ + I V+ +R S
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLTDLLEEIAKIPEVKRIRLGS---- 238
Query: 187 VDPQRINPELIQCLKE 202
++P I + + L +
Sbjct: 239 LEPGFITKDTLDRLSK 254
>gi|222100438|ref|YP_002535006.1| hypothetical protein CTN_1464 [Thermotoga neapolitana DSM 4359]
gi|221572828|gb|ACM23640.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 319
Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 32/232 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
+ C C FC + + G K V S D + + S+ +E+ F GG
Sbjct: 6 VFLPYAGCRKRCVFCDQVKATGQVK--VPSLDDIAQLIEEYSKTSKEYELGFYGG-TFTG 62
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +++++ L +R V+ +R +R P + E ++ LK+ +
Sbjct: 63 LSEQKMEEYLSFVRRFPVVKSIRISTR-----PDEVTVEKLEILKKYDVETIEVGVQSFS 117
Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263
E S+EA A + G L SV L+ G+ + + EIL+ L
Sbjct: 118 DEVLEASKRGYTSDEAEKACKLIKKMGFRL---SVHLMVGLPKSSREGEILSALRTIECG 174
Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
RI P + + + + L +EE I + L + G
Sbjct: 175 ADLVRIHPTLVFEGTELHRMMEASQYSPLDLEEAIDICSDLVCILEGWGVRV 226
>gi|291559329|emb|CBL38129.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
SSC/2]
Length = 440
Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E D D + L + R +K+ C +C +C G + + ++
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185
Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + I + T G D L L +L+ + I V+ +R S
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238
Query: 187 VDPQRINPELIQCLKE 202
++P I + + L +
Sbjct: 239 LEPGFITKDTLDRLSK 254
>gi|315425435|dbj|BAJ47099.1| molybdenum cofactor biosynthesis protein A [Candidatus
Caldiarchaeum subterraneum]
Length = 347
Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 36/253 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C FC V +L+ ++ + I + +V +GG+PL+
Sbjct: 33 LSVTDRCNFRCDFCMPLHPVWIPHKEILTYEEMARVIR-ILVGMNVTKVRLSGGEPLMRR 91
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
L+K +K + I V+ + + E LKEAG V +++H+ P
Sbjct: 92 D--LEKGVKLISSIPGVETISMTTNG------YFLEEKAAQLKEAGLQSVTVSLHSLKPE 143
Query: 218 EFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDDPEI-LANL-MRTFVELR 265
F + + G+ + V+ +G NDD + L ++ +R
Sbjct: 144 RFEKIVGRKDVFSKVLDGLREAKKVGLQPIKINCVVTRGCNDDEILDFVELGRQSGFSIR 203
Query: 266 IKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
Y G + ++ + G +I+ ++EK GL ++LP G +
Sbjct: 204 FIEY-----MPFDGRHLWDVSRLVPGMEIIEKIREKY-GL------VELPREPGSTAV-V 250
Query: 325 HNIKKVGNGSYCI 337
+ +G+ +
Sbjct: 251 YEFADGADGNVAV 263
>gi|167767374|ref|ZP_02439427.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
gi|167711349|gb|EDS21928.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
Length = 440
Score = 54.0 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E D D + L + R +K+ C +C +C G + + ++
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185
Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + + I + T G D L L +L+ + I V+ +R S
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238
Query: 187 VDPQRINPELIQCLKE 202
++P I + + L +
Sbjct: 239 LEPGFITKDTLDRLSK 254
>gi|78060080|ref|YP_366655.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
gi|77964630|gb|ABB06011.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
Length = 374
Score = 53.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 58/233 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P
Sbjct: 46 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR SRV + I
Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAI 162
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G+NDD
Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGVNDD- 208
Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ L+R F + + Y G S + + ++++
Sbjct: 209 -QILPLVRHFRQSGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255
>gi|95929921|ref|ZP_01312661.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
gi|95133890|gb|EAT15549.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
684]
Length = 325
Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + CR+C V VLS ++ + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNMRCRYCMPAHGVEKVTHDDVLSYEELYRISQA-AVTTGIEKIRVTGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI---AIHA 213
K + L+ L I ++ L + + E+ LK+AG K + + +++A
Sbjct: 74 -RKGIVPFLERLSRIDGLKQLVLTTNGL------MLDEMAYDLKQAGVKHLNVSLDSLNA 126
Query: 214 NHPYEFS--EEAIAAISRLANA---GIILLSQSVLLKGINDDP-EILANLMR 259
N E + + ++ LA A G+ + V+++G+ND E A L R
Sbjct: 127 NTFAEVTRGANLVKVLAGLAAAERVGLPVKLNMVVMRGVNDHEIERFAELTR 178
>gi|313904193|ref|ZP_07837572.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6]
gi|313470995|gb|EFR66318.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6]
Length = 461
Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 36/161 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T D
Sbjct: 84 LMDNYKSCRNKCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLTNMD---- 134
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ ++++ ++ + I V +P+ L++ +H H
Sbjct: 135 -DHDIDRIIR--YRMEPINI-----SVQTTNPE---------LRKT------MLHNRHAG 171
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
E + RLA+AGI + Q VL KG+ND E+ ++
Sbjct: 172 EIFP----KLRRLADAGIEMNGQIVLCKGLNDGEELERSIR 208
>gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
3_2_56FAA]
Length = 324
Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C ++ + +LS ++ + I + TGG+PL+
Sbjct: 14 ISVTDRCNLRCRYCMPEDIPSVEHTDILSYEELLSICES-AADLGICKFKITGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
K ++ L+ + V+ + S +++P ++ LKEAG I I +
Sbjct: 71 RKGCAGFIERLKQLPGVRQVTLTSNGLLLEPY------LERLKEAGID-GINISLDTLDE 123
Query: 216 --PYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
E + ++A+ A G+ V++KGINDD EIL L
Sbjct: 124 KKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EILDLL 171
>gi|254173709|ref|ZP_04880381.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
gi|214032401|gb|EEB73231.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
Length = 400
Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 84/208 (40%), Gaps = 26/208 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FT 150
R P + + C + C+ C R E + LS+++ +A + + + + + ++ T
Sbjct: 13 RKPVLVFWETTKACQLKCKHC-RAEAILQALPGELSTEEGKALIDSLTDFGRPYPILILT 71
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GGDPL+ + L + +R P V P + E I+ + +G ++
Sbjct: 72 GGDPLMRKD------IFELIDYAVEKGVRVGL-APAVTP-LLTEETIERIARSGVK-AVS 122
Query: 211 IHANHP----------YEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
I + P E + E + AI G+ + +V+++ + E L +++
Sbjct: 123 ISLDSPFPDVHDAIRGIEGTWEKTVWAIKEFLKHGLSVQVNTVVMR---ETVEGLPEMVK 179
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTI 287
+L ++ + + + G +F +
Sbjct: 180 LLKDLGVEIWEVFYLVPT-GRGNFESDL 206
>gi|326434948|gb|EGD80518.1| molybdenum cofactor synthesis 1 isoform 2 [Salpingoeca sp. ATCC
50818]
Length = 399
Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 32/178 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + L C + C++C E V S K +L+ + LA I + + +
Sbjct: 82 GRQHSY---LRISLTERCNLRCQYCMPEEGVQLSPKDELLTFDELVR-LARIFASNGVSK 137
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+PL+ +L +++ R + ++ + + + LK+AG
Sbjct: 138 IRLTGGEPLLYP--QLSDLIREFRGMPGIESVGITTNGLT------LARKLDALKDAGL- 188
Query: 207 VYIAIHAN------HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250
H N H ++F+ + I +AG+ VL + +NDD
Sbjct: 189 ----THLNVSLDTFHEHKFNIISRRRGLDRVFRGIDAAIDAGLTPKINVVLTRNVNDD 242
>gi|331081966|ref|ZP_08331094.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405561|gb|EGG85091.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 460
Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 83 LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S + +I+ +H + Q NP+L + L
Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ + + RL AGI + Q VL KG+ND E+ ++ + P+ +
Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222
Query: 277 AAGTSHFR 284
G S +R
Sbjct: 223 PVGLSKYR 230
>gi|296328428|ref|ZP_06870954.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154502|gb|EFG95294.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 435
Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E E+I G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|19704549|ref|NP_604111.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714835|gb|AAL95410.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 435
Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E E+I G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|332797327|ref|YP_004458827.1| Radical SAM domain-containing protein [Acidianus hospitalis W1]
gi|332695062|gb|AEE94529.1| Radical SAM domain protein [Acidianus hospitalis W1]
Length = 396
Score = 53.2 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTV 125
+PEE +D I + + + ++ +L L L + C C +CF++ + +
Sbjct: 38 EVPEELKDIIEEGFSATFDEFLQKFKKEVLEPTLVLTYRCNFDCVYCFQKAF---RNNSS 94
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+S K + Y++ + +V T GG+PL L +R++++ L +K+ S
Sbjct: 95 VSDKVVRGFIKYVRTHANGRKVRVTYFGGEPL-LELRRIKEISTQLSDLKY-------SF 146
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS---- 239
+ + + + LK G ++ I + P E ++ + + IIL +
Sbjct: 147 SIVTNGSLLTRHVFDELKSLGLT-HVQITLDGPREVHDKRRYFVGGKGSYDIILKNLKEI 205
Query: 240 Q---SVLLKGIN---DDPEILANLMRTFVELRIK-----PYYLHHPDLAAGTSHF 283
Q +V+L+ +N ++ + +L+R + I P+ +H D ++
Sbjct: 206 QDEVNVVLR-VNIDVNNLDSFRDLLRDLKQNGITKVRLDPHLVH--DNVFRNEYW 257
>gi|260588685|ref|ZP_05854598.1| PDZ domain protein [Blautia hansenii DSM 20583]
gi|260541160|gb|EEX21729.1| PDZ domain protein [Blautia hansenii DSM 20583]
Length = 460
Score = 52.8 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 83 LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S + +I+ +H + Q NP+L + L
Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ + + RL AGI + Q VL KG+ND E+ ++ + P+ +
Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222
Query: 277 AAGTSHFR 284
G S +R
Sbjct: 223 PVGLSKYR 230
>gi|313114943|ref|ZP_07800439.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310622736|gb|EFQ06195.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 441
Score = 52.8 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
H C +C FCF ++ + ++ D E YI
Sbjct: 80 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 125
Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + +++K H+ + H+ +PQ ++ L
Sbjct: 126 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 162
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + + RL GI + Q VL +GIND E+ L
Sbjct: 163 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGDELRRTLSDLL 204
>gi|291550924|emb|CBL27186.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
torques L2-14]
Length = 459
Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ H C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 84 LMDEYHSCHNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYVTL 130
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + +I+R+ + Q NPEL + L H
Sbjct: 131 TN---------MSEKDMNRIVRYRLEPINISFQTTNPELRCKML-----------H---- 166
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ EA+ + L GI + Q VL +G+ND E+ ++ R + P +
Sbjct: 167 NRFAGEALKKVDILYQGGIEMNGQIVLCRGVNDGEELERSI-RDLTQ--YLPLLRSVSVV 223
Query: 277 AAGTSHFR 284
G S +R
Sbjct: 224 PVGLSKYR 231
>gi|269215395|ref|ZP_06159249.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122]
gi|269130882|gb|EEZ61957.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122]
Length = 457
Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 46/181 (25%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + C C FCF R++ + +++ D + Q T
Sbjct: 93 DGAIFDDIKTCRNACVFCFMRQLPADARDSLMLRDD-----DWRLSFLQGNFTSLTA--- 144
Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
L+ + ++++ HV LR H I PE+ + I H
Sbjct: 145 --LTDEEADEIIER-----HVSPLRVSLHC---------ITPEV--------RRTMIGRH 180
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-----MRTFVELRIK 267
A H E + +L GI + Q VL+ GIND E++ L + I
Sbjct: 181 APHGVEM-------MEKLLAGGIEMYMQIVLVPGINDGRELMKTLTWAYTHEGIANVGIV 233
Query: 268 P 268
P
Sbjct: 234 P 234
>gi|262068261|ref|ZP_06027873.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693]
gi|291377999|gb|EFE85517.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693]
Length = 439
Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I + I K K +
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|237740317|ref|ZP_04570798.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31]
gi|229422334|gb|EEO37381.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31]
Length = 439
Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I + I K K +
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|298675037|ref|YP_003726787.1| radical SAM domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298288025|gb|ADI73991.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303]
Length = 315
Score = 52.8 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 58/242 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H++ R+ L + C + C++C R G + + E ++E
Sbjct: 33 QHKF-GRMHLAVAPKCNIQCKYCIRDNDCVNECRPGVTSKVLTPQEALEKTRQVLEEHPF 91
Query: 144 IWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I + G GDPL + + + K++K +V I+ + P RI+ L
Sbjct: 92 IKVIAIAGPGDPL-ANDETFETFKLIKE--EFPNV-IICMSTNGLA-LPDRIDDML---- 142
Query: 201 KEAGKPVYIAIHANHPY-EFSEEAIAA------------------------ISRLANAGI 235
+AG N E + I R AGI
Sbjct: 143 -DAGVQTLTVT-VNAVDPEIQRQICDRVVYNGKLYKGKEAAELLINNQLEGIKRAIEAGI 200
Query: 236 ILLSQSVLLKGINDD--PEILANLMR-TFVELRIKPYYLHHPDLAAGTSH--FRLTIEEG 290
++ +VL+ +NDD +I + + I P L + +R+ EE
Sbjct: 201 VIKINTVLVPDVNDDHVVDIAKKMNELGVFIMNIMP-------LIPQAEYAEWRVPTEEE 253
Query: 291 QK 292
+K
Sbjct: 254 RK 255
>gi|34763184|ref|ZP_00144150.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887153|gb|EAA24258.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 435
Score = 52.4 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + IK ++ +R S V P +I I+ K + +
Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NENLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|14591390|ref|NP_143468.1| hypothetical protein PH1615 [Pyrococcus horikoshii OT3]
gi|3258044|dbj|BAA30727.1| 420aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 420
Score = 52.4 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142
G++ R + I ++ C + C FC E S+ + D + + + ++
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDIDYLMKWFNLVAKEKGK 167
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + G+PL+ + ++++ LR HV ++ S + ++ +L++ L E
Sbjct: 168 GLEAHLDAQGEPLMYP--FIVELVQALRDHPHVSVISMQSNGVL-----LDDKLVEELAE 220
Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
AG V ++IH +H E +E L NAGI +L V++
Sbjct: 221 AGLDRVNLSIHSLDPKKAKMLMGIKDYDLSHVLEMAEA-------LVNAGIDVLIAPVII 273
Query: 245 KGINDD 250
GINDD
Sbjct: 274 FGINDD 279
>gi|328555376|gb|AEB25868.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens TA208]
gi|328913747|gb|AEB65343.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens LL3]
Length = 341
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
DR L + + C C +C E+ G K +LS ++ E +
Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193
+ ++ TGG+PL+ + ++++ L I ++ + S +P+ Q R+
Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128
Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
L E K + + N + + I AG+ + V+ KG+N
Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177
>gi|308175399|ref|YP_003922104.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens DSM 7]
gi|307608263|emb|CBI44634.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens DSM 7]
Length = 344
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
DR L + + C C +C E+ G K +LS ++ E +
Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193
+ ++ TGG+PL+ + ++++ L I ++ + S +P+ Q R+
Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128
Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
L E K + + N + + I AG+ + V+ KG+N
Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177
>gi|260494169|ref|ZP_05814300.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
gi|260198315|gb|EEW95831.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
Length = 435
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + I+ ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|256027911|ref|ZP_05441745.1| Fe-S oxidoreductase [Fusobacterium sp. D11]
gi|289765860|ref|ZP_06525238.1| fe-s oxidoreductase [Fusobacterium sp. D11]
gi|289717415|gb|EFD81427.1| fe-s oxidoreductase [Fusobacterium sp. D11]
Length = 435
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + I+ ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|237744247|ref|ZP_04574728.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1]
gi|229431476|gb|EEO41688.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1]
Length = 435
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202
Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ +L+ + I+ ++ +R S V P +I I+ K K +
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275
>gi|255322313|ref|ZP_05363459.1| conserved hypothetical protein [Campylobacter showae RM3277]
gi|255300686|gb|EET79957.1| conserved hypothetical protein [Campylobacter showae RM3277]
Length = 429
Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 35/212 (16%)
Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118
K+E + +DP + + S K IV Y + +K+ C C +C +
Sbjct: 109 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 164
Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173
+ +G S + EA L I + E++ TG + L ++L L I
Sbjct: 165 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKIG 223
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ +R S ++P +I+ + L+E+ ++ I H E A+ R+
Sbjct: 224 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 272
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+Q+ D E+ L + L
Sbjct: 273 ----RNQAF------RDLELFLELSQMGFALG 294
>gi|154175462|ref|YP_001408235.1| hypothetical protein CCV52592_1067 [Campylobacter curvus 525.92]
gi|112802784|gb|EAU00128.1| conserved hypothetical protein [Campylobacter curvus 525.92]
Length = 416
Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 39/179 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + ++++ AA Y E++
Sbjct: 132 HTKAFIKIQEGCNFACSYCIIPSVRGKARSMDENSIINEAKILAANGY-------NELVL 184
Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L ++L L I ++ +R S ++P +I+ + LKE+
Sbjct: 185 TGTNIGSYGKDTGSSLGRLLANLGKIPGIRRIRLGS----IEPSQIDESFREILKESWLE 240
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
++ I H E + R+ +Q+ +D L L
Sbjct: 241 RHLHIALQHTSE-------KMLRIMRR----RNQA-----FSD-----LELFNELSSLG 278
>gi|302386478|ref|YP_003822300.1| protein of unknown function DUF512 [Clostridium saccharolyticum
WM1]
gi|302197106|gb|ADL04677.1| protein of unknown function DUF512 [Clostridium saccharolyticum
WM1]
Length = 459
Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 47/176 (26%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 82 LMSEYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 131
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S + +++K L I + H+ P + Q L H
Sbjct: 132 SDHDIDRIIKFKLAPI----NISVHTTNPSL--------RCQML-----------H---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELRIKPY 269
F+ +A+ I +L A I + Q VL KG+ND E + +L + PY
Sbjct: 165 NRFAGKALEKIQKLYEAEIPMNGQIVLCKGVNDGKELERTIEDLSKFL------PY 214
>gi|331085847|ref|ZP_08334930.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406770|gb|EGG86275.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 448
Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 92 LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S + ++++ +H + NPEL + L H
Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ +A+ + L GI + Q VL KGIND E+ ++ P+ +
Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231
Query: 277 AAGTSHFR 284
G + FR
Sbjct: 232 PVGLTKFR 239
>gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM
265]
gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM
265]
Length = 351
Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVIF 149
HR + + C + C +C R E G T +S + ++ + E + I ++
Sbjct: 32 HRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLAE-AGITKIRL 90
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGG+PL+ + ++ T + ++ + + + ++ L L V +
Sbjct: 91 TGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLL-----LDRHLDALLSAGIDAVNM 143
Query: 210 AIHANHPYEFSEEAI--------AAISRLAN-AGIILLSQSVLLKGINDD 250
+I + F A + RL + + L V+L+GINDD
Sbjct: 144 SIDSLRADRFLAITRRNEFERTKANLDRLLSLESVPLKINVVMLRGINDD 193
>gi|225572012|ref|ZP_03780876.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM
10507]
gi|225040545|gb|EEG50791.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM
10507]
Length = 460
Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 83 LMDEYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 132
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S + ++L+ L I + F + +PQ Q L H
Sbjct: 133 SDHDIDRILQYRLEPI----NISFQT----TNPQL----RCQLL-----------H---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ +A+ + RL I + Q VL KGIND E+ +L
Sbjct: 166 NRFAGKALEKVRRLYEGNIAMNGQIVLCKGINDGQELEKSLS 207
>gi|325661997|ref|ZP_08150616.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471660|gb|EGC74879.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 448
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 92 LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S + ++++ +H + NPEL + L H
Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ +A+ + L GI + Q VL KGIND E+ ++ P+ +
Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231
Query: 277 AAGTSHFR 284
G + FR
Sbjct: 232 PVGLTKFR 239
>gi|70726341|ref|YP_253255.1| hypothetical protein SH1340 [Staphylococcus haemolyticus JCSC1435]
gi|68447065|dbj|BAE04649.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 448
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I LK + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKRSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHV 257
>gi|257439161|ref|ZP_05614916.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165]
gi|257198412|gb|EEU96696.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165]
Length = 442
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
H C +C FCF ++ + ++ D E YI
Sbjct: 82 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127
Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + +++K H+ + H+ +PQ ++ L
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + + RL GI + Q VL +GIND E+ L
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGEELRRTLGDLL 206
>gi|78777220|ref|YP_393535.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
1251]
gi|78497760|gb|ABB44300.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
1251]
Length = 415
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 14/127 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C C +C + G + D E L I+ ++ E I TG
Sbjct: 133 KSRAFIKIQEGCNFRCSYCIIPYVRGDARSM-----DEEKILEQIRRLARNGFGEFILTG 187
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + + ++K + I+ V+ +R S V+P +IN E + L E +
Sbjct: 188 TNVGSYGQKNDSSIASLMKKISQIRGVRRIRVGS----VEPIQINDEFKEILDEPWLERH 243
Query: 209 IAIHANH 215
+ I H
Sbjct: 244 LHIALQH 250
>gi|323702404|ref|ZP_08114069.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
DSM 574]
gi|323532710|gb|EGB22584.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
DSM 574]
Length = 441
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
R LK+ C +C +C G + + L +AA +Q+ E++ TG
Sbjct: 145 RAFLKIQEGCNSFCAYCIIPYARGPVR-SRLPENVLKAATELVQQ--GYQEIVLTGIHIG 201
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
D + L +++ L + ++ LR S V+P IN LI+ + +
Sbjct: 202 AYGQD-FTAQNIDLAWLVERLAAVPGLRRLRLGS----VEPHDINTALIEAVANHP-NIC 255
Query: 209 IAIHA 213
+H
Sbjct: 256 RHLHI 260
>gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
lipocalidus DSM 12680]
Length = 326
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C V +LS ++ + + + I +V TGG+PL+
Sbjct: 14 VSVTDRCNLRCRYCMPEAGVELKPHSEILSLEEIHRIIK-VGTRVGIRKVRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
+ L ++++ +R I + + + + PE+ LKEAG + +++ +P
Sbjct: 72 -RRNLSRLVQMIRTIDLIDDVAITTNGLLF------PEMAGELKEAGLHRLNVSLDTMNP 124
Query: 217 YE---FS--EEAIAAISRLANA----GIILLSQSVLLKGINDD 250
+ + A+ + A + +V+++GINDD
Sbjct: 125 EKYSFITRNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167
>gi|15618388|ref|NP_224673.1| hypothetical protein CPn0477 [Chlamydophila pneumoniae CWL029]
gi|4376761|gb|AAD18617.1| Hypothetical Protein CPn_0477 [Chlamydophila pneumoniae CWL029]
Length = 421
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDRIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 457
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 62/180 (34%), Gaps = 44/180 (24%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + + VC C FCF R + + T +L D L+++Q T
Sbjct: 93 DGAIFDGIRVCRNACMFCFMRMLPKESRDTLMLRDDDWR--LSFLQGN----FTTLT--- 143
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
LS + ++ + HV LR + C+ + I HA
Sbjct: 144 --NLSEEDADEITER-----HVSPLRVS---------------LHCISPEVRSKMIGRHA 181
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-----LMRTFVELRIKP 268
+H + +L GI L Q VLL G+ND E++ L + I P
Sbjct: 182 DHGVRM-------MEKLLAGGIELYMQIVLLPGVNDGAELMKTLAWAYLHEGIANVGIVP 234
>gi|317486219|ref|ZP_07945053.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
3_1_6]
gi|316922518|gb|EFV43770.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
3_1_6]
Length = 347
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 20/162 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C +VL ++ E + + + +V TGG+P +
Sbjct: 30 LSVTDRCNLRCTYCRSGMETFIPHESVLRYEEMEQLVD-MAMDMGVEKVRLTGGEPF--A 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
K L+ LR +R + ++ P IQ LK G + + +
Sbjct: 87 RKGFADFLERLRAAHPALDIRVTTNGTLIGPH------IQTLKAIGLN-AVNLSLDTFDR 139
Query: 216 -------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + L +AGI +V L+G NDD
Sbjct: 140 DKFEQITGRDLFGKVRENMDALLDAGIPFKLNAVALRGFNDD 181
>gi|295103495|emb|CBL01039.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium
prausnitzii SL3/3]
Length = 445
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
H C +C FCF ++ + ++ D E YI
Sbjct: 82 AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127
Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + +++K H+ + H+ +PQ ++ L
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
E + + RL GI + Q VL +G+ND L RT +L
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 205
>gi|325265090|ref|ZP_08131817.1| PDZ domain protein [Clostridium sp. D5]
gi|324029780|gb|EGB91068.1| PDZ domain protein [Clostridium sp. D5]
Length = 435
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPAGMRDTL-----------YFKDDDS--RLSFLQGNYITL 128
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + +I+++H + NPEL + L H
Sbjct: 129 TN---------MSDHDVERIVKYHLEPINISFHTTNPELRCKML-----------H---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ +A+ + L GI + Q VL KG+ND E+ ++ P +
Sbjct: 165 NRFAGDALKKVDILYQGGIEMNGQIVLCKGVNDGAELERSIRDL---TGYLPLLQSVSVV 221
Query: 277 AAGTSHFR 284
G + FR
Sbjct: 222 PVGLTKFR 229
>gi|18978000|ref|NP_579357.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM
3638]
gi|18893779|gb|AAL81752.1| hypothetical protein PF1628 [Pyrococcus furiosus DSM 3638]
Length = 419
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 45/190 (23%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138
G++ R + I ++ C + C FC R ++ D A
Sbjct: 108 GLIDRGTNLIQVRGSTGCNLSCIFCSVDEGPYSRTRNLDFVVDVDYLMKWFDWVAK---- 163
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
++ + + G+PL+ + ++++ LR HV ++ S + ++ +L++
Sbjct: 164 EKGKGLEAHLDAQGEPLLYP--YIVELVQELRSHPHVSVISMQSNGVL-----LDEKLVE 216
Query: 199 CLKEAGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQ 240
L EAG V ++IH NH E +E L NAGI +L
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLIA 269
Query: 241 SVLLKGINDD 250
V++ GIND+
Sbjct: 270 PVIIFGINDN 279
>gi|319957025|ref|YP_004168288.1| miab-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
16511]
gi|319419429|gb|ADV46539.1| MiaB-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
16511]
Length = 421
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + + + E I TG +
Sbjct: 135 KSRAFIKIQEGCNFRCSYCII-PFVRGNARSH-DEEQILEQVRRLAAN-GFGEFILTGTN 191
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
R L K+LK + I+ V+ +R S ++P +I+ E ++ L E ++A
Sbjct: 192 VGSYGRDRGTSLAKLLKRMSQIRGVRRIRIGS----LEPIQIDAEFMELLAEP----WMA 243
Query: 211 IH 212
H
Sbjct: 244 RH 245
>gi|160942964|ref|ZP_02090202.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii
M21/2]
gi|158445658|gb|EDP22661.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii
M21/2]
Length = 447
Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
H C +C FCF ++ + ++ D E YI
Sbjct: 84 AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 129
Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + +++K H+ + H+ +PQ ++ L
Sbjct: 130 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 166
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
E + + RL GI + Q VL +G+ND L RT +L
Sbjct: 167 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 207
>gi|327398341|ref|YP_004339210.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
gi|327180970|gb|AEA33151.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
Length = 410
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + PL+ I+ +Y R +K+ C +C +C + G ++ K+ +
Sbjct: 107 DISDETKTYPLERILSQYRGKSRAFVKIQEGCNNHCTYCIISFLRGRERD-----KEKDK 161
Query: 134 ALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
L+ I+ K+ E++ TG + I S++ L+ +L+ + ++ +R S ++P
Sbjct: 162 VLSEIESLAKAGFSEIVLTGTN--IGSYRDLKGLLRDIDALEGDFRVRISS----IEPMY 215
Query: 192 INPELIQCLKEAGKPVYIAI 211
++ E I + ++ I
Sbjct: 216 VDKEFIDIVASGRFANHLHI 235
>gi|329942587|ref|ZP_08291397.1| RNA modification enzyme, MiaB family protein [Chlamydophila
psittaci Cal10]
gi|332287217|ref|YP_004422118.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
gi|313847811|emb|CBY16802.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506891|gb|ADZ18529.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
gi|328815497|gb|EGF85485.1| RNA modification enzyme, MiaB family protein [Chlamydophila
psittaci Cal10]
gi|328914465|gb|AEB55298.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
Length = 422
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 39/192 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVTQGYREVVIAG 188
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K L ++ + I ++ +R S +DP+ + +L L +GK
Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDILL-SGKHTC- 242
Query: 210 AIHANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
H++H S + ++R + G L D + L + +
Sbjct: 243 --HSSHLVLQSGSNAILKRMNRKYSRGDFL-----------DCVDALRS---------VD 280
Query: 268 PYYLHHPDLAAG 279
P Y D+ G
Sbjct: 281 PQYAFTTDVIVG 292
>gi|225418715|ref|ZP_03761904.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme
DSM 15981]
gi|225041770|gb|EEG52016.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme
DSM 15981]
Length = 486
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 43/189 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 96 LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 142
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + + +I+R + Q NPEL + L H
Sbjct: 143 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKML-----------H---- 178
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPD 275
F+ E + + L + + + Q V KG+ND E L+RT + P+
Sbjct: 179 NRFAGETLKYMRMLYDGHVEMNGQVVCCKGVNDGAE----LVRTLDDLAGFLPFLRSVSV 234
Query: 276 LAAGTSHFR 284
+ AG + +R
Sbjct: 235 VPAGITKYR 243
>gi|77464115|ref|YP_353619.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter
sphaeroides 2.4.1]
gi|77388533|gb|ABA79718.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter
sphaeroides 2.4.1]
Length = 491
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA E Q
Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117
Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
+ + G GD L +L ++++ I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V L ++ P V +I P + + + A+ L G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
+++ SVL+ GIND + L R I P D A GT HF LT +
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280
Query: 290 G 290
G
Sbjct: 281 G 281
>gi|269303354|gb|ACZ33454.1| RNA modification enzyme, MiaB family [Chlamydophila pneumoniae
LPCoLN]
Length = 421
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|261367336|ref|ZP_05980219.1| PDZ domain protein [Subdoligranulum variabile DSM 15176]
gi|282570095|gb|EFB75630.1| PDZ domain protein [Subdoligranulum variabile DSM 15176]
Length = 445
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 39/165 (23%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
H C +C FCF ++ + + D E + LS +
Sbjct: 83 KHSCANHCMFCFIDQLPPGMREPLYFKDDDERLSFLFGNYITLT----------NLSDRE 132
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANHPYEFS 220
+ ++++ +I + + H+ +PQ RI + L
Sbjct: 133 IDRIIE--MHISPI-FVSVHT----TNPQLRI-----RMLANKR---------------G 165
Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
E +A + RLA G+ L Q VL +GIND + L + + LR
Sbjct: 166 GEVLAYLPRLAAGGVELNCQLVLCRGIND-GDELRRTLDDLLALR 209
>gi|15836008|ref|NP_300532.1| hypothetical protein CPj0477 [Chlamydophila pneumoniae J138]
gi|16752565|ref|NP_444827.1| hypothetical protein CP0277 [Chlamydophila pneumoniae AR39]
gi|33241829|ref|NP_876770.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
gi|14916790|sp|Q9Z874|Y477_CHLPN RecName: Full=Putative methylthiotransferase
CPn_0477/CP_0277/CPj0477/CpB0496
gi|7189201|gb|AAF38135.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978847|dbj|BAA98683.1| hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236338|gb|AAP98427.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
Length = 421
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G E LA I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD + L +++ + I ++ +R S +DP I +L + + +
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241
>gi|213965848|ref|ZP_03394039.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Corynebacterium amycolatum SK46]
gi|213951426|gb|EEB62817.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Corynebacterium amycolatum SK46]
Length = 401
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 47/220 (21%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
+ P ++ ++ C + C+ C R + LS+ + + L + S+ V+ T
Sbjct: 11 KKPFIVIWEVTRACGLVCKHC-RADAQHEPHPLQLSTAEGKVLLETLASYSKPKPLVVLT 69
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEA 203
GGDP L+++ +RF + P V P R+ PE I+ L+EA
Sbjct: 70 GGDPF--ERDDLEEL------------VRFGTEHGLNMSLSPSVTP-RLTPERIKSLREA 114
Query: 204 -GKPVYI----AIHANHP--YEFSEEAIAAISR---LANAGIILLSQSVLLKGINDDPEI 253
GK + + A H FS + + AG L S L KG +
Sbjct: 115 GGKAMSMSLDGATAQTHDKFRGFSGTFEKTLKMAPHINEAGYRLQINSTLTKG---NIHE 171
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
L++T +E++ K +Y+ F + G +
Sbjct: 172 APALLKTVMEMQAKMWYVF----------FLVPTGRGADL 201
>gi|315651882|ref|ZP_07904885.1| PDZ domain protein [Eubacterium saburreum DSM 3986]
gi|315485884|gb|EFU76263.1| PDZ domain protein [Eubacterium saburreum DSM 3986]
Length = 456
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 50/207 (24%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P EE + E D IG +G++ Y C C FCF +M
Sbjct: 56 PNGEEWELDIESDYDDIGLEFD---EGLMSDYK---------SCTNNCIFCFIDQMPQGM 103
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRF 180
+ T+ D ++ L+++Q V T + + + ++++ L I +
Sbjct: 104 RETLYFKDD-DSRLSFLQGN----YVTLT-----NMKDEDIDRIIRFNLAPI----NISV 149
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H+ +P+ L++ +H F+ E++ I +L + + Q
Sbjct: 150 HT----TNPE---------LRKK------MLH----NRFAGESLKYIDKLYEKNVPMNGQ 186
Query: 241 SVLLKGINDDPEILANLMRTFVELRIK 267
V+ G ND E+ L +
Sbjct: 187 VVMCPGYNDGEELRRTLNDLLKYAPVM 213
>gi|288940317|ref|YP_003442557.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
DSM 180]
gi|288895689|gb|ADC61525.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
DSM 180]
Length = 328
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + G ++ LS ++ E +A + V TGG+PL+
Sbjct: 19 LSVTDRCDLRCGYCLPKGFKGFEEPAHWLSFEEIERVVAAFTA-LGVRRVRLTGGEPLM- 76
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
+ L ++ L + + L S L L AG + + +++ + +P
Sbjct: 77 -RRGLTELAARLSALPGLDDLSLSSNA------TQLESLAGPLARAGVRRLNVSLDSLNP 129
Query: 217 ---YEFS----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + E I+ AG+ + +V+++G+ND
Sbjct: 130 EVFRQITGGDLERVRRGIAAAREAGMEPIRVNTVVMRGVNDT 171
>gi|295100401|emb|CBK97946.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium
prausnitzii L2-6]
Length = 443
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
H C +C FCF ++ + ++ D E YI
Sbjct: 82 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127
Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + +++K H+ + H+ +PQ ++ L
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
E + + RL GI + Q VL +GIND L RT +L
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDG----DELRRTLTDL 205
>gi|126462958|ref|YP_001044072.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides ATCC 17029]
gi|126104622|gb|ABN77300.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides ATCC 17029]
Length = 491
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA E Q
Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117
Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
+ + G GD L +L ++++ I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V L ++ P V +I P + + + A+ L G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
+++ SVL+ GIND + L R I P D A GT HF LT +
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280
Query: 290 G 290
G
Sbjct: 281 G 281
>gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
F6-596]
Length = 333
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + I K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + AG + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDD 170
>gi|332558991|ref|ZP_08413313.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides WS8N]
gi|332276703|gb|EGJ22018.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides WS8N]
Length = 491
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA E Q
Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117
Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
+ + G GD L +L ++++ I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V L ++ P V +I P + + + A+ L G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
+++ SVL+ GIND + L R I P D A GT HF LT +
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280
Query: 290 G 290
G
Sbjct: 281 G 281
>gi|163813999|ref|ZP_02205392.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759]
gi|158450693|gb|EDP27688.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759]
Length = 442
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF + + T+ D ++ L+++Q + T +
Sbjct: 80 LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + +++ L I + H+ +PQ L
Sbjct: 130 KDEDIDRIINYHLAPI----NISVHT----TNPQL----RCSMLN--------------- 162
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ + I + NAGI + Q VL KGIND E+ ++
Sbjct: 163 NRFAGTILERIRKFYNAGIPMNGQIVLCKGINDGEELWRSIS 204
>gi|154687786|ref|YP_001422947.1| molybdenum cofactor biosynthesis protein A [Bacillus
amyloliquefaciens FZB42]
gi|166217238|sp|A7Z9P0|MOAA_BACA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|154353637|gb|ABS75716.1| MoaA [Bacillus amyloliquefaciens FZB42]
Length = 341
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 25/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G K +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RINPELIQCLKEA 203
PL+ + +++K L I ++ + S +P+ Q R+ L E
Sbjct: 81 PLMRKD--MPELIKKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVTVSLDSLEDER 138
Query: 204 GKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
K + + N + + I AG+ + V+ KG+N
Sbjct: 139 FKAINGRGVSVN-------KVLEGIEAAKAAGLGVKINMVVQKGVN 177
>gi|153816158|ref|ZP_01968826.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756]
gi|317500478|ref|ZP_07958702.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089421|ref|ZP_08338320.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846493|gb|EDK23411.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756]
gi|316898233|gb|EFV20280.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|330404789|gb|EGG84327.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 452
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 85 LMDEYRSCRNKCMFCFIDQMPEGMRDTLYFKDD-DSRLSFLQGN----YVTLT-----NM 134
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S ++ +I+R+ + Q NP+L + L H
Sbjct: 135 SDHDIE------------RIIRYRLEPINISFQTTNPQLRCKML-----------H---- 167
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ +A+ + RL GI + Q VL KG ND E+ ++ + P +
Sbjct: 168 NRFAGDALKKVDRLFEGGIEMNGQIVLCKGENDGAELERSI-KDLTA--YIPLLRSVSVV 224
Query: 277 AAGTSHFR 284
G + FR
Sbjct: 225 PVGLTKFR 232
>gi|242280341|ref|YP_002992470.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
salexigens DSM 2638]
gi|259495863|sp|C6C060|MOAA_DESAD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|242123235|gb|ACS80931.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
salexigens DSM 2638]
Length = 330
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 43/253 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C ++ +L ++ + + I ++ TGG+P
Sbjct: 16 LSVTDRCNLRCMYCVTKDFKHIPHPDILRYEEMLRLVD-LAASMNISKLRLTGGEPF-AR 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HAN 214
+ + + + + LR + +++P + PEL + + + + +
Sbjct: 74 KGFMDFISQVMDSHPEID-LRITTNGTLIEP--LVPEL-KKIGVSRLNISLDTLDRETF- 128
Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDP-----EILANLMRTFVEL 264
E + + +A IS +AGI + +V +KGIND + +
Sbjct: 129 --KEVTGRDHLTDVLATISACLSAGIRVKVNAVAMKGINDRELNSFIDFARENPIDMRFI 186
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ--------PFYILDLPGG 316
P D S F I+ +E ++ + P + + GG
Sbjct: 187 EFMP----MGDDTKSDSRFW----SADDILEQGREYVNLIPVKRTAENRGPARMYSIEGG 238
Query: 317 YGKV----KIDTH 325
G++ + +H
Sbjct: 239 KGRLGLISPVSSH 251
>gi|229917634|ref|YP_002886280.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
AT1b]
gi|229469063|gb|ACQ70835.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
AT1b]
Length = 335
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C CR+C FR ++ +LS + E + I + +V TGG+
Sbjct: 17 ISVIDKCNFRCRYCMPEEAFRHHQF-LKRDELLSFDEIERFVRIIAPH-GVKKVRLTGGE 74
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ LR + ++ +
Sbjct: 75 PLLRPN--LDELIRRLRAVTTIETI 97
>gi|256395785|ref|YP_003117349.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Catenulispora acidiphila DSM 44928]
gi|256362011|gb|ACU75508.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Catenulispora acidiphila DSM 44928]
Length = 334
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
++P + L+ L C + C C + + + E ALA ++E V G
Sbjct: 25 KFPLLVELEPLFACNLACAGCGKIQHP---ADVLKKRMPVEQALAAMRECGAPM-VSIAG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL+ ++ +++ L +K + + + ++ P+ + K + ++
Sbjct: 81 GEPLMHP--QIGELVDELVKMK--RYVFLCTNALLI------PKKLDRFKPSRYFTWVV- 129
Query: 212 HANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDP----EILANL 257
H + E +EA+AA+ L G + + + + D P +IL L
Sbjct: 130 HLDGLRERHDESVCKEGVFDEAVAAVRELRRRGFRVTTNTTIFDT--DSPQDVIDILDYL 187
Query: 258 MRTFV--ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ I P Y + + A HF L +++ +++
Sbjct: 188 NDDLRVDQMMISPGYAY--EKAPDQQHF-LPVKQTRELFHKA 226
>gi|226355448|ref|YP_002785188.1| molybdenum cofactor biosynthesis protein A [Deinococcus deserti
VCD115]
gi|226317438|gb|ACO45434.1| putative molybdenum cofactor biosynthesis protein A [Deinococcus
deserti VCD115]
Length = 337
Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 34/183 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C + G + +LS ++ E + ++ TGG+
Sbjct: 19 ISVTDRCNLRCTYCMPASVFGPDYAFVPRSELLSFEEIERLTRLFLI-LGVRKLRLTGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
P + L ++ L ++ V+ L + + P L + LK AG
Sbjct: 78 PTLRRD--LSDLIARLARLEGVEDLAMTTNGL------LLPRLARELKSAGLRRVTVSLD 129
Query: 212 --------HAN----HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
N HP + + AA+ AG+ + +V+ +G+ND + L L
Sbjct: 130 SLDPDVFGQMNGLGVHPQQVLDGIEAALQ----AGLGVKINTVVQRGVND--QGLRELWL 183
Query: 260 TFV 262
Sbjct: 184 ALR 186
>gi|268609957|ref|ZP_06143684.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus flavefaciens
FD-1]
Length = 443
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLIL 157
LK+ C C +C + G K + +D ++ E + E++ D L
Sbjct: 149 LKVAEGCSNCCTYCAIPLIRG--KFRSVPMEDVLKEARFLAEN-GVTELVVIAQDTALYG 205
Query: 158 SH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212
+L ++L L I ++ +R P+RI EL+ + K V Y+ I
Sbjct: 206 KDLYGEPKLAELLTELCRIDGLKWIR----TLYCYPERITDELLDVIAREDKIVKYMEIP 261
Query: 213 ANHPY 217
H
Sbjct: 262 IQHCN 266
>gi|146303295|ref|YP_001190611.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145701545|gb|ABP94687.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
Length = 347
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 99/283 (34%), Gaps = 47/283 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++L+ C + C+ C + + G L++++ ++ + + S + + +GGD
Sbjct: 4 PYVVVLESTKACDLACKHCRAKAIPNRLPGE-LTTEEVKSLVDDLAS-SGVKLFVISGGD 61
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L + ++L+ +I + RIN E+ + +K+ G + ++I
Sbjct: 62 AL--KRDDIFEILEY----SSAKI----TTALSPSGSRINVEVAKRIKDTGVSM-VSISV 110
Query: 214 NHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ P E +E A A+ L + + S + + D + L +
Sbjct: 111 DGPEEIHDEFRGVRGAFKMAKQAVDSLHEVKLPVQINSTISRYNVDHLQELRKTVEAL-- 168
Query: 264 LRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYILDLP 314
+P Y + T +T E+ ++++ ++ K ++ GL P+ + +
Sbjct: 169 ---RPVYWDVFMLIPTGRATKEMMITSEQAEEVMRTITKWRMEGLNVRMTCAPYLVRVMN 225
Query: 315 GGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347
+ Y + V+
Sbjct: 226 EMGVVRPLPPDKNYGRRSVNGARGCMAGNGYAFVAYDGTVYPC 268
>gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 290
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 12/139 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ ++ C C +C ++ M G T + EAAL + WE +GG+P
Sbjct: 7 TVSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPF 63
Query: 156 ILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+L KRL +V K L H V +L + P R+ I+ E + ++H
Sbjct: 64 LL--KRLPEVAKRLATAGHKVSLL-----TNLSAPLRVLATFIEAAGEQLRTFSCSLHRE 116
Query: 215 HPYEFSE-EAIAAISRLAN 232
E + E A+ L
Sbjct: 117 EVEEAAFLEKAQAVQALLA 135
>gi|160895345|ref|ZP_02076116.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
gi|156863038|gb|EDO56469.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
Length = 439
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 25/155 (16%)
Query: 69 ILPEEREDPIGDNNHSPLK---GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
+ E D + + PL + H R +K+ C +C +C +
Sbjct: 120 VTDEGMLDISAEKEYEPLTINSTLEH---TRAYVKIQDGCNQFCSYC-----IIPYVRGR 171
Query: 126 LSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQIL 178
+ S+D + + ++ + + E++ TG + L V+ + I+ ++ +
Sbjct: 172 IRSRDIASIIEEVERLALTGVKEIVLTGIHISSYGKDKENEVGLADVIDAISKIESIKRI 231
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
R S ++P I E I + + K + H
Sbjct: 232 RLGS----LEPSIITDEFIDRIVDNEK---VCPHF 259
>gi|289671287|ref|ZP_06492362.1| hypothetical protein XcampmN_23115 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 78
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 24/69 (34%)
Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
+ + L + + + + + + + + +DP+ RQ +P E+
Sbjct: 1 MRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60
Query: 68 NILPEERED 76
+P D
Sbjct: 61 QPVPGFGLD 69
>gi|110596760|ref|ZP_01385050.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
ferrooxidans DSM 13031]
gi|110341447|gb|EAT59907.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
ferrooxidans DSM 13031]
Length = 424
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQI 144
H++ RI L + C + C +C R+ ++ ++SK + A+ Y+ + I
Sbjct: 17 HKF-GRIHLPIAPKCNIQCNYCNRKFDCMNENRPGVTSKILSPQQAMHYLDQAMILSPNI 75
Query: 145 WEVIFTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQI 177
V G GDP ++ ++ + L + HV
Sbjct: 76 AVVGIAGPGDPFANPNETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELAELQVSHV-T 134
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+ + +DP+ I E+ ++ K +Y + + A+ RL AG+
Sbjct: 135 ITIN----AIDPE-IGSEIYAWVR-YNKKMYRD--IDAARVLIGNQLEALKRLKEAGVTA 186
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270
S+++ GIND I R EL PYY
Sbjct: 187 KVNSIIIPGINDTHVIEVA--RKVAELGADILNCMPYY 222
>gi|221639981|ref|YP_002526243.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides KD131]
gi|221160762|gb|ACM01742.1| Nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides KD131]
Length = 491
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA E Q
Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117
Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
+ + G GD L +L ++++ I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDRVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V L ++ P V +I P + + + A+ L G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
+++ SVL+ GIND + L R I P D A GT HF LT +
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280
Query: 290 G 290
G
Sbjct: 281 G 281
>gi|134300331|ref|YP_001113827.1| RNA modification protein [Desulfotomaculum reducens MI-1]
gi|134053031|gb|ABO51002.1| RNA modification enzyme, MiaB family [Desulfotomaculum reducens
MI-1]
Length = 436
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 18/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCF--------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
R LK+ C +C +C R + + + + + I
Sbjct: 143 KTRAFLKIQEGCNSFCAYCIIPYARGPVRSRLP--ENVLSSAEELIQQGFQEIVLTG--I 198
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ G D L +++ L + + LR S V+P IN LI+ + E
Sbjct: 199 HIGAYGQD-FTGKDIDLGWLVERLAKLPGLTRLRLGS----VEPHDINNALIKAVSEHP- 252
Query: 206 PVYIAIHA 213
V +H
Sbjct: 253 NVCRHLHI 260
>gi|308176262|ref|YP_003915668.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
arilaitensis Re117]
gi|307743725|emb|CBT74697.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
arilaitensis Re117]
Length = 346
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 29/172 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G ++ +LS ++ E LA I + ++ TGG+
Sbjct: 22 ISVTDRCNFRCVYCMPKEIFGRDFQFRERSELLSFEEIER-LARISVSLGVTKLRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-------HSRVPIVDPQ-------RINPELIQC 199
PL+ + + ++ L ++ + R S +P++ P R+ L
Sbjct: 81 PLL--RRGIVDLVAMLSNLRTPEGKRIDLAMTTNGSALPVLAPALKEAGLNRVTISLDSL 138
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E K + N P + + AI G+ + +V+ +G+ND
Sbjct: 139 DDEKFKAINDV---NFPVS---KVLEAIQVAREVGLGPVKINTVIKRGVNDS 184
>gi|325108721|ref|YP_004269789.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis
DSM 5305]
gi|324968989|gb|ADY59767.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis
DSM 5305]
Length = 358
Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 49/207 (23%)
Query: 86 LKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALA 136
++ ++ R PDR + + C + C FC R V +
Sbjct: 94 VECVLMREPDRNTICISTQVGCGMGCVFCASGLAGLTRNLQTAEILEQVARLDRLQ---- 149
Query: 137 YIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVD 188
+ ++ V+ G G+PL L+++L L ++H V+ + + +
Sbjct: 150 --SDDEKLTNVVVMGMGEPL----ANLKQLLPALERMQHALGLNLGVRRITVST---VGL 200
Query: 189 PQRINPELIQCLKEAGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAG 234
P RI + L GKP + +++H N AA G
Sbjct: 201 PDRI-----RQLAAHGKPYNLAVSLHAPNDKLRDEIVPVNDKIGLDAVLSAADEYFETTG 255
Query: 235 IILLSQSVLLKGINDDPEILANLMRTF 261
+ + VLLKGIND E L
Sbjct: 256 RRVTYEYVLLKGINDSLEHAHELAEVL 282
>gi|223985672|ref|ZP_03635720.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
12042]
gi|223962363|gb|EEF66827.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
12042]
Length = 439
Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 8/135 (5%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ PL H R LK+ C +C +C G ++ L + + A
Sbjct: 136 AEFEMLPLDEFEH--QTRAYLKVQDGCNQFCAYCIIPYARGRERSLPL-DEALKEARRLA 192
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
Q+ +I G L +++ + I+ ++ +R S + I + I EL+
Sbjct: 193 QKHKEIVLAGIHTGRYGKDRDTSLCDLIRGMCEIEPLERIRI-SSIEITE---ITDELL- 247
Query: 199 CLKEAGKPVYIAIHA 213
L E + +H
Sbjct: 248 TLMETQPKIARHLHI 262
>gi|294782589|ref|ZP_06747915.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA]
gi|294481230|gb|EFG29005.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA]
Length = 439
Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R +K+ C +C +C K ++ + + E EVI G D
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGID- 201
Query: 155 LIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L + +L+ + IK ++ +R S V P +I+ + I K K +
Sbjct: 202 LSAYGEDFEKKDSFESLLEDILKIKDLKRVRIGS----VYPDKISDKFIDLFK--NKNLM 255
Query: 209 IAIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 256 PHLHIS-LQSCDDTVLKNMRR 275
>gi|147678958|ref|YP_001213173.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
thermopropionicum SI]
gi|189028691|sp|A5CYZ0|MOAA_PELTS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|146275055|dbj|BAF60804.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
thermopropionicum SI]
Length = 325
Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 47/259 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E V S G +L ++ E + + + ++ TGG+PL+
Sbjct: 14 ISVTDRCNLRCVYCMPEEGVRSLPHGEILRLEEIETVVRA-AALTGVKKIRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
K L+++++ + I + + + + P R + LKEAG K V +++
Sbjct: 72 -RKGLEELVRRVSGIPGIDDIALTTNGLL-LPSR-----AKALKEAGVKRVNVSLDTLRA 124
Query: 217 Y---EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMRTFVELRI 266
E + A I +AG+ + +V+++G N D+ +A L
Sbjct: 125 DRYAEITRGGNLAGAWEGIQSALDAGLHPVKLNTVIIRGFNEDEVVAMAMLTIN------ 178
Query: 267 KPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
+P LH +S + + +++ ++ K+ G P GG
Sbjct: 179 RP--LHVRFIELMPIGSSSSWAAGRYVP---AAEVMDAISAKL-GPLVPARQP-AGGGPA 231
Query: 319 KVKIDTHNIKKVGNGSYCI 337
K + K G+
Sbjct: 232 K-----YYRLKDAAGTVGF 245
>gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
29176]
gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
29176]
Length = 456
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 41/172 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ H C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 83 LMDEYHSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S K ++ +I+R+ + Q NPEL + L H
Sbjct: 133 SDKDVE------------RIVRYRLEPINISFQTTNPELRCKML-----------H---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
F+ EA+ + L GI + Q VL KG+ND E+ ++ P
Sbjct: 166 NRFAGEALKKVDILYQGGIEMNGQIVLCKGVNDGEELERSIRDL---TGYLP 214
>gi|114566232|ref|YP_753386.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337167|gb|ABI68015.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 333
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 39/215 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C ++C C+R G++ LS++ + + I++ + +IF+GG+PL+
Sbjct: 3 VSWNTTNQCNMFCDHCYRDA--GARLEDELSTEQAKKLIEEIKK-AGFRIMIFSGGEPLM 59
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVY------ 208
L + R RV + + I+PE+ Q LK+AG
Sbjct: 60 RPDIFELGQYAT-----------RQGLRVVMGTNGSLISPEVAQKLKKAGFMAAGVSLDS 108
Query: 209 IAIHANHP-YEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ N+ + + L +AG+ + ++ + + L + +E+
Sbjct: 109 LNPAKNNAFRKLDNAFQLTCEGMQNLKDAGLPFQVHTTVMDW---NVDELEAICDFAIEI 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
Y++ F + G I
Sbjct: 166 GAMAYHVF----------FLVPTGRGADIEEEALR 190
>gi|116749858|ref|YP_846545.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698922|gb|ABK18110.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 347
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 37/206 (17%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT 150
+P + +L C + CR C S + + ALA + + EV+FT
Sbjct: 8 FPVLVGWELTLACNLRCRHC-----ASSAGEARSNELTLDEALAICDQLPPLLVLEVVFT 62
Query: 151 GGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG+PL+ + + + LR + HV ++ + I E+++ L+ AG +
Sbjct: 63 GGEPLLSP--HWEAIARRLRELGIHVGVVTNGT--------LITDEMLERLRGAGIT-AM 111
Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLM 258
A+ + E + + I R AG + +V+ +N L+ ++
Sbjct: 112 AVSMDGLSETHDFIRGVPGLHDRVMRGIERSLKAGFQI---TVIT-TVNALTVRELSGML 167
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFR 284
+ +K G R
Sbjct: 168 ELLQGIGVK---RWQLQPVFGFGRMR 190
>gi|227872687|ref|ZP_03991017.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
gi|227841501|gb|EEJ51801.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
Length = 423
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
D I ++ +P+ +E+ + + + RY LK+ C YC +C
Sbjct: 89 DEIRKE-LPEIDEITSVKDYVKRLDHQMARVESGEKYSRY-----LKIAEGCDKYCSYCI 142
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFTGGDPLILSHKRLQKVLKT 168
+ G + ++ E A A + E + E G D + K L ++L
Sbjct: 143 IPRLRGHYR-SIPKELVLEEARALVSEGAGELILVAQETTLYGTD--LYKKKALAELLAE 199
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L I ++Q +R P+ I PELI+ +K K
Sbjct: 200 LSEIPNLQWIRI----LYCYPEEIEPELIREMKRNPK 232
>gi|228476133|ref|ZP_04060841.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|314936303|ref|ZP_07843650.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
gi|228269956|gb|EEK11436.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|313654922|gb|EFS18667.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
Length = 448
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLVQS--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I LK + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHV 257
>gi|224477241|ref|YP_002634847.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
subsp. carnosus TM300]
gi|7674139|sp|Q9ZIM6|MOAA_STACT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|3955209|gb|AAC83144.1| MoaA [Staphylococcus carnosus]
gi|222421848|emb|CAL28662.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 340
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G K +LS + E +A + + ++ TGG+
Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLSFSEMER-IARVYTHLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
PL+ L K++ L I+ V+ + R V I+ EL
Sbjct: 77 PLMRRD--LYKLIAALNEIEGVEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDNEL 134
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + ++ + I + G + V+ KG+NDD
Sbjct: 135 FQSINNRNIK-------------ADTILEQIDYAVSIGFKVKINVVVQKGVNDD 175
>gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
11548]
Length = 309
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 101 LLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C FC G Q +G+ L+++D E A +Y+ K +++ TGG+PL+
Sbjct: 17 VDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKLTGGEPLLRR 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
+ K+++ + + V I + + L +AG + + ++IH P
Sbjct: 73 D--IDKIVEAIARVAAVSITTNGL---------LLRRWVDRLYKAGLRKINVSIHTADPE 121
Query: 218 EF-------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLMR--TFVELR 265
++ + + L N G+ + +V+L+GIN D + + L++ ++
Sbjct: 122 KYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELVKLAASLDAS 181
Query: 266 IKPYYLHHPDLAAGT-----SHFRLTIEEGQKIVASLKEK 300
++ + +G+ + IE +IV L +
Sbjct: 182 LQ----FIELMPSGSGLKVFGDYYEPIETIAEIVTRLGGR 217
>gi|148270762|ref|YP_001245222.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|147736306|gb|ABQ47646.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
Length = 317
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
+ C C FC + + G K V S D + S +E+ F GG
Sbjct: 6 VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V +
Sbjct: 63 LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117
Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264
E S+EA A + G +L V L G + EIL+ L
Sbjct: 118 DEVLEKSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177
Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
RI P + + + L +EE I + L
Sbjct: 178 VRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215
>gi|326204997|ref|ZP_08194848.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM
2782]
gi|325984863|gb|EGD45708.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM
2782]
Length = 438
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 72/238 (30%), Gaps = 88/238 (36%)
Query: 41 PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
+ L+ P+ I E+ + +E ED D S + G
Sbjct: 42 RYYQSSEELLLEIEKPDGEIW--------EIEVEKDETEDLGLDFEDSLIDG-------- 85
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
C C FCF ++ + TV D
Sbjct: 86 -----AKSCTNKCIFCFIDQLPKGMRETVYFKDD-------------------------- 114
Query: 157 LSHKRLQKVLK---TLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
RL + TL IK+ ++ R H R+ P+ +++H
Sbjct: 115 --DSRLSFLTGNYVTLTNIKNEELERIIHYRM--------------------SPINVSVH 152
Query: 213 ANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMR 259
+P F+ + + I L + GI + Q VL + IND E + +L +
Sbjct: 153 TTNPDLRKFMLGNRFAGDVMDKIRMLTDNGIEVNCQIVLCRDINDKDELDKTIEDLCQ 210
>gi|118474280|ref|YP_892031.1| hypothetical protein CFF8240_0856 [Campylobacter fetus subsp. fetus
82-40]
gi|118413506|gb|ABK81926.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
82-40]
Length = 413
Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 87 KGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQE 140
K IV Y + +K+ C C +C R + + +L+ A+ Y
Sbjct: 121 KNIVSNYENHTKAFIKIQEGCNFKCSYCIIPSVRGKSRSIDEEVILNEAKILASNGY--- 177
Query: 141 KSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG + ++ L K+L+ L IK ++ +R S ++P +I+
Sbjct: 178 ----NEIVLTGTNIGSYGEEKSSSLGKLLQKLGSIKGIKRIRLGS----IEPSQIDESFR 229
Query: 198 QCLKEAGKPVYIAIHANH 215
+ L+E+ ++ I H
Sbjct: 230 EILQESWLEKHLHIALQH 247
>gi|21226859|ref|NP_632781.1| NifB protein [Methanosarcina mazei Go1]
gi|20905162|gb|AAM30453.1| NifB protein [Methanosarcina mazei Go1]
Length = 328
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 46/244 (18%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140
K H++ RI L + C + C FC R G + + E + +
Sbjct: 33 KNAQHKF-GRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPREALEKTRQILAD 91
Query: 141 KSQIWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQI----------------LRFH 181
I V G GDPL + + + ++++ V + LR
Sbjct: 92 YPFIKVVAIAGPGDPL-ANDETFETFELIRK--EFPEVTLCMSTNGLMLPEKLPDMLRVG 148
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-----HPYEFS-EEAIAAISRLANAGI 235
V I+PE+ + + H E + + I +AGI
Sbjct: 149 VSTLTVTVNAIDPEIQAKIVNH-----VVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGI 203
Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGT-SHFRLTIEEGQKI 293
++ +VL+ GIND + + + R EL + Y ++ L G +H E +K
Sbjct: 204 VVKVNTVLIPGIND--KHVVEIARKLNELGV--YIMNVMPLINQGAFAHLEPPTAEERKA 259
Query: 294 VASL 297
V
Sbjct: 260 VQEA 263
>gi|319400639|gb|EFV88864.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis FRI909]
Length = 340
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 77 PLL--RRNLYKLIEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121
Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
I + N E + I A + L + G + V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175
>gi|170289492|ref|YP_001739730.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|170176995|gb|ACB10047.1| Radical SAM domain protein [Thermotoga sp. RQ2]
Length = 317
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
+ C C FC + + G K V S D + S +E+ F GG
Sbjct: 6 VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V +
Sbjct: 63 LSEEKMEEYLRFVKRFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEIGVQSFL 117
Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264
E SEEA A + G +L V L G + EIL+ L
Sbjct: 118 DEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177
Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
RI P + + + L +EE I + L
Sbjct: 178 VRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDL 215
>gi|323464328|gb|ADX76481.1| conserved hypothetical protein [Staphylococcus pseudintermedius
ED99]
Length = 449
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|315452778|ref|YP_004073048.1| MiaB-like tRNA modifying protein [Helicobacter felis ATCC 49179]
gi|315131830|emb|CBY82458.1| MiaB-like tRNA modifying enzyme,2-methylthioadenine synthetase
[Helicobacter felis ATCC 49179]
Length = 418
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C C +C + G + + + L ++ + I E++ TG
Sbjct: 132 KTRAFVKIQEGCDFKCSYCVIPLVRGKSRSLIE-----DQILDQVRVLAQKGIVEIVLTG 186
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206
+ + + ++++ + I+ ++ +R S ++P +I+ E ++ L K
Sbjct: 187 TNVGSYGKETRSNIARLIQKIARIEGIKRVRIGS----LEPSQIDAEFLELLDHPILEKH 242
Query: 207 VYIAIHANH 215
++IA+ +H
Sbjct: 243 LHIALQHSH 251
>gi|319892634|ref|YP_004149509.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus pseudintermedius HKU10-03]
gi|317162330|gb|ADV05873.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus pseudintermedius HKU10-03]
Length = 449
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|315658148|ref|ZP_07911020.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
gi|315496477|gb|EFU84800.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
Length = 451
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + + E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 201
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLETIDSLERIRISS----IEASQLTDEVIDVIEKSNK- 253
Query: 207 VYIAIHA 213
V +H
Sbjct: 254 VVRHLHI 260
>gi|227501282|ref|ZP_03931331.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus
tetradius ATCC 35098]
gi|227216515|gb|EEI81921.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus
tetradius ATCC 35098]
Length = 312
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153
+ + C C++C +G +L +D +A I I ++ TGG+
Sbjct: 14 ISVTDRCNFRCKYC-----IGDDGVDLLKHEDILSYEEIKEIAEICADFGIKKIRVTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
P + + L + + L I ++ + + +I +L + L+E G K + ++
Sbjct: 69 PFV--RRGLLNLFEMLTKIDGIEDI-----GVTTNGSKIYDKL-ERLRELGIKRINFSLD 120
Query: 213 A---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIND 249
+ + ++ E +I++ G + +VL+KG ND
Sbjct: 121 TLDRDKFRQITKVDCLNEVKKSINKALELGFRVKINTVLIKGFND 165
>gi|15615089|ref|NP_243392.1| molybdenum cofactor biosynthesis protein A [Bacillus halodurans
C-125]
gi|24212015|sp|Q9K9W9|MOAA_BACHD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|10175146|dbj|BAB06245.1| molybdopterin cofactor biosynthesis [Bacillus halodurans C-125]
Length = 338
Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 25/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C ++ G K +LS ++T + + S I ++ TGG+
Sbjct: 19 ISVTDRCNFRCHYCMPADIFGPDYPFLKKTEILSFEETNRLVHLFHQTSPIKKIRITGGE 78
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
PL+ +L +L I+ V + + +P ++ LK+AG K V +++
Sbjct: 79 PLMRKDVDQLISMLTATTGIEDVAMTTNGTLLP---------KMADKLKKAGLKRVTVSL 129
Query: 212 HANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ +F ++ + + AG+ + V+ KG+ND
Sbjct: 130 DSLEDEQFGKINGRGIGTKPVLDGMEAAKEAGLGVKVNMVVQKGVND 176
>gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4]
gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4]
Length = 419
Score = 50.1 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
G++ R + I ++ + C + C FC E S+ + D + + + E ++I
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167
Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
E G G+PLI + ++++ LR +V ++ S + + +L++ L E
Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LTDKLVEELAE 220
Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246
AG V ++IH E + L NAGI +L V++ G
Sbjct: 221 AGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLEHVLEMAEALVNAGIDVLIAPVIIFG 275
Query: 247 INDD 250
INDD
Sbjct: 276 INDD 279
>gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
carboxidivorans P7]
Length = 262
Score = 50.1 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+I ++ +TGG+PLIL + + ++ I+ ++ + + ++ +L LKE
Sbjct: 2 EIKKIRYTGGEPLILKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKE 53
Query: 203 AGKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
AG + I + E + + + AI + + GI + +VL+KGINDD
Sbjct: 54 AGLK-RVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 110
>gi|289578123|ref|YP_003476750.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
gi|289527836|gb|ADD02188.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
Length = 449
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S++ E L ++ S E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVRRFADSGYKEIVLTG 209
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P+ E ++ + +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262
Query: 205 K 205
K
Sbjct: 263 K 263
>gi|314934315|ref|ZP_07841674.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
C87]
gi|313652245|gb|EFS16008.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
C87]
Length = 341
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L ++++ L I+ ++ + + LK+ G+ +Y
Sbjct: 78 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + +E AI+ +L Q V+ KG+NDD
Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176
>gi|223042523|ref|ZP_03612572.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
SK14]
gi|222444186|gb|EEE50282.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
SK14]
Length = 341
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L ++++ L I+ ++ + + LK+ G+ +Y
Sbjct: 78 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + +E AI+ +L Q V+ KG+NDD
Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176
>gi|188997227|ref|YP_001931478.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932294|gb|ACD66924.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 208
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L+ L C C C+ +V G + E L I++ + ++ +GG+P I
Sbjct: 21 CLILFLAGCNFRCLHCYNWRVVLDIAGNIP----IERVLEEIEKSPFLECIVISGGEPTI 76
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182
+ L +++ T++ + +R +
Sbjct: 77 HEPEELIELVNTIKKVNPELKIRIDT 102
>gi|223039951|ref|ZP_03610234.1| conserved hypothetical protein [Campylobacter rectus RM3267]
gi|222878819|gb|EEF13917.1| conserved hypothetical protein [Campylobacter rectus RM3267]
Length = 431
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 35/212 (16%)
Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118
K+E + +DP + + S K IV Y + +K+ C C +C +
Sbjct: 111 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 166
Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173
+ +G S + EA L I + E++ TG + L ++L L +
Sbjct: 167 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKVG 225
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ +R S ++P +I+ + L+E+ ++ I H E A+ R+
Sbjct: 226 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 274
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+Q+ D E+ L L
Sbjct: 275 ----RNQAF------RDLELFLELSEMGFALG 296
>gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
[Thermococcus gammatolerans EJ3]
gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
[Thermococcus gammatolerans EJ3]
Length = 419
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 38/199 (19%)
Query: 78 IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
I + PL G++ R + I ++ + C + C FC E S+ + D +
Sbjct: 93 IHEALDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152
Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + E ++I E G G+PLI + ++++ LR +V ++ S +
Sbjct: 153 YLMKWFDEVARIKGKGLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL- 209
Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231
+ +L++ L EAG V ++IH E + L
Sbjct: 210 ----LTDKLVEELAEAGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLDHVLEMAEALV 260
Query: 232 NAGIILLSQSVLLKGINDD 250
NAGI +L V++ GINDD
Sbjct: 261 NAGIDVLIAPVIIFGINDD 279
>gi|116753747|ref|YP_842865.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
gi|116665198|gb|ABK14225.1| Radical SAM domain protein [Methanosaeta thermophila PT]
Length = 365
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P ++L + C + C +C+ G + + A+ + E + ++V GG
Sbjct: 22 HPRTLILWVTTDCNLRCVYCYAN---GGDNKAYMGWDVAKRAIDLVAEGADCFKVQLAGG 78
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PL L+ +++++ + + ++ + ++ P + L+ G V +++
Sbjct: 79 EPL-LNFGLIERIVFYIHDLGADASIQLQTNATLISPA-----IASRLRALGIGVGVSLD 132
Query: 213 ----AN-HPYEF------SEEAIAAISRLANAGIILLSQSVL 243
N H F + I I L +AGI + SVL
Sbjct: 133 GVPAINDHLRPFADGHGSTHSVINGIRNLRDAGISVGMTSVL 174
>gi|220904538|ref|YP_002479850.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868837|gb|ACL49172.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 344
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 31/167 (18%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C VL ++ + I + + +V TGG+P
Sbjct: 29 LSVTDRCNLRCMYCCSNARQTCIPHTQVLRYEEMARMVG-IMARLGVTKVRLTGGEPFAR 87
Query: 158 S--HKRLQKVLKTLRYI------------KHVQILR-FHSRVPIVDPQRINPELIQCLKE 202
L + + H+ +LR + + + E +
Sbjct: 88 KGCDGFLYMLHSRFPDMDLRLTTNGTLLEPHIPLLRQVGVKAVNLSLDSFDRETFAKVTG 147
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ ++A+ RL +AGI + +V ++G+ND
Sbjct: 148 --------------RDMQPAVLSALDRLLSAGIRVKVNAVAMRGVND 180
>gi|258424004|ref|ZP_05686886.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
gi|257845625|gb|EEV69657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
Length = 448
Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S+ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSEYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|268679888|ref|YP_003304319.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
6946]
gi|268617919|gb|ACZ12284.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
6946]
Length = 414
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 33/184 (17%)
Query: 89 IVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
IVH Y + +K+ C C +C V S+D + + ++ +
Sbjct: 124 IVHEYTGKTKAFIKIQEGCNFRCSYCII-PFVRGN----ARSQDEQKIIEQVEKLALNGY 178
Query: 145 WEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
E + TG + + L ++++ L I+ V+ +R S ++P +I+ + L
Sbjct: 179 GEFVLTGTNIGSYGKDKGSSLGRLVQRLGAIRGVRRIRLGS----IEPVQIDESFREILN 234
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E ++ I H E A+ +L + + D E+ L
Sbjct: 235 EPWLERHLHIALQHTSE-------AMLQLMRR----RN------NVKRDLELFMELGEKG 277
Query: 262 VELR 265
L
Sbjct: 278 FALG 281
>gi|307636979|gb|ADN79429.1| MiaB family protein [Helicobacter pylori 908]
gi|325995571|gb|ADZ50976.1| MiaB-like tRNA modifying enzyme [Helicobacter pylori 2018]
gi|325997166|gb|ADZ49374.1| putative MiaB like protein [Helicobacter pylori 2017]
Length = 418
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206
+ R + +++K L I ++ +R S ++P +IN E ++ L E K
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS----LEPNQINDEFLELLGEDFLEKH 243
Query: 207 VYIAIHANH 215
++IA+ +H
Sbjct: 244 LHIALQHSH 252
>gi|157164712|ref|YP_001466755.1| hypothetical protein CCC13826_0085 [Campylobacter concisus 13826]
gi|157101465|gb|EAT97324.2| conserved hypothetical protein [Campylobacter concisus 13826]
Length = 412
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 41/192 (21%)
Query: 83 HSPLKGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALA 136
+S K IV Y + +K+ C C +C R + + +L A
Sbjct: 117 NSVDKNIVTNYENHTKAFIKIQEGCNFNCSYCIIPSVRGKARSMDEAMILKEARILAQNG 176
Query: 137 YIQEKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
Y E++ TG + ++ L K+L L I ++ +R S ++P +I+
Sbjct: 177 Y-------NELVLTGTNIGSYGKDTNSSLGKLLANLGKISGIRRIRLGS----IEPSQID 225
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
+ LKE ++ I H A+ + +++ N+
Sbjct: 226 ESFREILKEEWLERHLHIALQH-------TSQAMLK-------------IMRRRNNAFSD 265
Query: 254 LANLMRTFVELR 265
L L L
Sbjct: 266 L-ELFNELSSLG 276
>gi|297570341|ref|YP_003691685.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
alkaliphilus AHT2]
gi|296926256|gb|ADH87066.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
alkaliphilus AHT2]
Length = 368
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 84 SPLKGIV--H-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
P+ G+ H R + + L + C + CR+C + + +LS ++ E +
Sbjct: 37 EPVSGLTDNHGRMVNYVRLAVTDRCNLNCRYCRPKGPCNEPRRELLSYEELERICRLLVA 96
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I +V TGG+PL+ + L+ LR IK +Q L + ++ P ++ L
Sbjct: 97 M-GISKVRVTGGEPLV--RHGMLGFLRQLRDIKGLQQLALTTNATLLAPHL---SELRQL 150
Query: 201 KEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEI 253
+ +G + + A + A I AG+ + +V+ +GIN D+
Sbjct: 151 RLSGLNISLDTLQPERFAAITGQDLFARVFAVIEAAVAAGMPVKINAVVQEGINTDELLE 210
Query: 254 LANLMRT 260
LA L
Sbjct: 211 LARLAEK 217
>gi|206895763|ref|YP_002246862.1| oxygen-independent coproporphyrinogen III oxidase
[Coprothermobacter proteolyticus DSM 5265]
gi|206738380|gb|ACI17458.1| oxygen-independent coproporphyrinogen III oxidase
[Coprothermobacter proteolyticus DSM 5265]
Length = 258
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151
YP + C C FC +R + + E A YIQ+ + + E+ F G
Sbjct: 4 YP---VFLSHAGCRQRCVFCNQRA----AERIKPWKESIEEAFHYIQKSNLVYDEIAFYG 56
Query: 152 GDPLILSHKRLQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G P S L+ +L+ I ++ +R +R P IN +IQ L + G
Sbjct: 57 GTP-TSSENLLKDILQPFQTFLKIGKIKGIRISTR-----PDEINESIIQILVDYGVSTV 110
>gi|281416862|ref|ZP_06247882.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
gi|281408264|gb|EFB38522.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
Length = 434
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V++ R +K+ C +C +C G + S ++ ++ + S EV+
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194
Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
TG + + L +++ + I+ ++ +R S ++P + E ++ +K
Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246
>gi|107022977|ref|YP_621304.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia AU 1054]
gi|116686780|ref|YP_840027.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia HI2424]
gi|105893166|gb|ABF76331.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
gi|116652495|gb|ABK13134.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
Length = 374
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P
Sbjct: 46 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR SRV + +
Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G+NDD
Sbjct: 163 DDAVFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208
Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ L+R F + Y G S + + ++++
Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255
>gi|125972674|ref|YP_001036584.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
gi|256004833|ref|ZP_05429807.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|125712899|gb|ABN51391.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC
27405]
gi|255991143|gb|EEU01251.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|316941090|gb|ADU75124.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
1313]
Length = 434
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V++ R +K+ C +C +C G + S ++ ++ + S EV+
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194
Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
TG + + L +++ + I+ ++ +R S ++P + E ++ +K
Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246
>gi|310779932|ref|YP_003968264.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
gi|309749255|gb|ADO83916.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
Length = 292
Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 19/152 (12%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDP 154
+LL++ C C FC ++ KD + A + I V GD
Sbjct: 17 LLLQVTVGCAHNKCAFCTMYRETQFSTESIEQVEKDLKEAR---KIHKSIKRVFLVNGDA 73
Query: 155 LILSHKRLQKVLKT-LRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+L RL+ + + + Y V+++ H + + EL + K +++ +
Sbjct: 74 FVLGASRLKPIAEKIIEYFPEVEVITMYAH---INNIKGKTDEELKELAKLRINDLWVGV 130
Query: 212 HANHPYEFS--------EEAIAAISRLANAGI 235
H EEA + RL +AGI
Sbjct: 131 ETGHEEALKYLDKGFNLEEAKEQLKRLGDAGI 162
>gi|313904622|ref|ZP_07837997.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
gi|313470592|gb|EFR65919.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
Length = 457
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 52/239 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPL 155
+ C C +CF VG ++ + E + YI E ++++ GG+PL
Sbjct: 119 IFPTSTCNAKCVYCFEENFVG----YTMTKEVQEQVVKYILETKMPGHAIDLLWFGGEPL 174
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAI-- 211
I K + + LR V+ + + + + + ++ +K + V I +
Sbjct: 175 I-GAKIIDYICSELRKNG-VEF----TSMIVTNASLLTEDVADRMKNDWNIRQVQITLDG 228
Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN---DDPEILANLM 258
+ + + +AIAAI R+++ GI VL++ +N ++ E L L+
Sbjct: 229 TQEEYDARKCYIDDSRSYFPQAIAAIHRVSDRGIP-----VLIR-LNLDRNNAENLRELI 282
Query: 259 RTF-------VELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLK--EKISGLCQ 306
L + P LH G ++ + SGL +
Sbjct: 283 DYLEVEFPKKNNLYVYPGLLHQLMREKNAMDMW-----GVHASLMEYARSKGFCSGLMR 336
>gi|15807624|ref|NP_293989.1| molybdenum cofactor biosynthesis protein A [Deinococcus radiodurans
R1]
Length = 247
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 26/182 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C E+ G + +LS ++ E ++ TGG+
Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPRAELLSFEEIERLARVFVGLGA-EKLRITGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIH 212
P + L ++L L VQ L + + P L LK AG V I++
Sbjct: 74 PTLRRD--LPELLARLAAFPGVQDLAMTTNGL------LLPRLAADLKAAGLQRVTISLD 125
Query: 213 ANHPY---EFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+ P E + + I +AG+ + +V+ +G+ND E L L R E
Sbjct: 126 SLDPQVFGEMNGLGVSPQKVLGGIEAALHAGLGVKINTVVKRGVND--EHLTELWRGLRE 183
Query: 264 LR 265
Sbjct: 184 FG 185
>gi|331090850|ref|ZP_08339696.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399709|gb|EGG79371.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 437
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPKGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S +++++K L I + H+ +P+ L+ +H
Sbjct: 132 SDDDVRRIVKYHLEPI----NISIHT----TNPE---------LR------CKMLH---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ EA+ + L GI + Q VL KG ND E+ ++ + PY +
Sbjct: 165 NRFAGEALKKVDILYEGGITMNGQIVLCKGENDGEELERSIRD---MTKYLPYLQSVSVV 221
Query: 277 AAGTSHFR 284
G + +R
Sbjct: 222 PVGLTKYR 229
>gi|291522203|emb|CBK80496.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus catus
GD/7]
Length = 444
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF ++ + T+ D ++ L+++Q + T +
Sbjct: 83 LMDDYRSCSNNCIFCFIDQLPKGMRETMYFKDD-DSRLSFLQGN----YITMT-----NM 132
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ L+++++ L I + H+ +P+ L+ + +H
Sbjct: 133 KDEALERIIRYKLEPI----NVSVHT----TNPE---------LR------CMMLH---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ + + + +L GII+ Q VL K +ND E+ ++
Sbjct: 166 NRFAGKIMEQLQKLYEGGIIMNGQIVLCKNVNDGEELERSIR 207
>gi|62184901|ref|YP_219686.1| hypothetical protein CAB260 [Chlamydophila abortus S26/3]
gi|62147968|emb|CAH63716.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 421
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 45/195 (23%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVSQGYREVVIAG 188
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ K L ++ + I ++ +R S +DP+ + +L L +GK
Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDVLL-SGKHTC- 242
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQS---VLLKGIND--DPEILANLMRTFVEL 264
H++H L+ QS +LK +N + +
Sbjct: 243 --HSSH---------------------LVLQSGSNAILKRMNRKYSRGDFLDCVEALRSA 279
Query: 265 RIKPYYLHHPDLAAG 279
P Y D+ G
Sbjct: 280 --DPQYTFTTDVIVG 292
>gi|301165856|emb|CBW25429.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 433
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C FC + + + E A I++ E++ TG
Sbjct: 144 HTRAFLKIQDGCNYVCSFCII-PFARGRSKAISINGALENAKKLIED--GFKEIVLTGVN 200
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G+ S ++L ++K L ++ ++ LR S V+P I EL++ K + K
Sbjct: 201 IGEYETSSGEKLTDMVKALLDLEGLERLRLSS----VEPNTITDELLEVFKSSPK 251
>gi|52787593|ref|YP_093422.1| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
ATCC 14580]
gi|163119684|ref|YP_080993.2| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
ATCC 14580]
gi|319648075|ref|ZP_08002292.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
gi|81608871|sp|Q65DY5|MOAA_BACLD RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|52350095|gb|AAU42729.1| MoaA [Bacillus licheniformis ATCC 14580]
gi|145903194|gb|AAU25355.2| MoaA [Bacillus licheniformis ATCC 14580]
gi|317389710|gb|EFV70520.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
Length = 341
Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 39/173 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C E+ G KG +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNLRCTYCMPAEIFGQDYPFLPKGELLSFEELERLAKLFVHQFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDPQRINPELIQCLKEAG-KPVYI 209
PL+ + +++ L IK ++ + + +P+ LK+AG K V +
Sbjct: 81 PLMRKD--MPELVGKLAGIKGIRDIAMTTNGVLLPVY---------ADKLKKAGLKRVTV 129
Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248
++ +E +A I AG+ + V+ KG+N
Sbjct: 130 SL-----DSLDDERFKSINGRGVSVSKVLAGIEAAKKAGLGVKINMVVQKGVN 177
>gi|295092927|emb|CBK82018.1| MiaB-like tRNA modifying enzyme [Coprococcus sp. ART55/1]
Length = 452
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + + + G V R +K+ C +C +C + + S+
Sbjct: 134 EYFVDISRETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSQ 188
Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
EA LA + E ++ I EV+ TG D + L ++++ + IK ++ +R S
Sbjct: 189 EAILAEVSELAEAGIKEVVLTGIHISSYGKD--KNNEGALIELIEAISKIKGIKRIRLGS 246
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++P I E ++ + K + H
Sbjct: 247 ----LEPGIITEEFVERISSNSK---VCPHF 270
>gi|313633909|gb|EFS00625.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
N1-067]
Length = 335
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 23/191 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + I K I +
Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 66
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
V I++ + H F I + G + VL+KG NDD
Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDXX 178
Query: 257 LMRTFVELRIK 267
++ I+
Sbjct: 179 QFTKDKDINIR 189
>gi|310643276|ref|YP_003948034.1| gtp cyclohydrolase subunit moaa [Paenibacillus polymyxa SC2]
gi|309248226|gb|ADO57793.1| GTP cyclohydrolase subunit MoaA [Paenibacillus polymyxa SC2]
Length = 338
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 44/190 (23%)
Query: 86 LKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ- 143
LK ++ R P R L + + C C +C +E+ G + S+ + I ++
Sbjct: 6 LKDLLRR-PIRDLRISVTDRCNFRCSYCMPKEIFGDDFAFLPKSECL--SFEEIHRLTEL 62
Query: 144 -----IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--------------RF---H 181
+ ++ TGG+PL+ + L ++ + I V+ + R
Sbjct: 63 FVGLGVKKIRLTGGEPLMRPN--LPDLVSRILSINGVEDMGLTTNGLLLGQQAQRLYDAG 120
Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
R V +NPEL + G KP +I + E G +
Sbjct: 121 LRRLNVSVDALNPELFGRMNGRGIKPAFILKQIDCAREI--------------GFEIKVN 166
Query: 241 SVLLKGINDD 250
V+ KG+ND
Sbjct: 167 MVVQKGVNDS 176
>gi|282890695|ref|ZP_06299215.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499288|gb|EFB41587.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 430
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C + G + + + + I E++ TG
Sbjct: 133 HTRAFVKVQDGCNEFCTYCIIPYVRGRSRSRTIP-EIIDEVKDLISN--GFKEIVLTGIN 189
Query: 152 -----GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KE 202
G+P+ + RL +++ + + ++ LR S +DP I+ EL + +
Sbjct: 190 IGDFDGNPVEGMPPHRLVDLVRAVDQVPGLKRLRISS----IDPDEIDDELADAVLNGAK 245
Query: 203 AGKPVYIAIH 212
++I +
Sbjct: 246 TCHSMHIVLQ 255
>gi|242243931|ref|ZP_04798374.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis W23144]
gi|242232564|gb|EES34876.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis W23144]
Length = 340
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121
Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
I + N E + I A + L + G + V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175
>gi|317128920|ref|YP_004095202.1| molybdenum cofactor biosynthesis protein A [Bacillus
cellulosilyticus DSM 2522]
gi|315473868|gb|ADU30471.1| molybdenum cofactor biosynthesis protein A [Bacillus
cellulosilyticus DSM 2522]
Length = 339
Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 31/170 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQ----EKSQIWEVIFTGGD 153
L + C CR+C E+ + ++ +AYI + + I +V TGG+
Sbjct: 18 LSVTDRCNFRCRYCMPPEIFDKNFQFLPKNEVLTLEEMAYITKLFVKAASIKKVRITGGE 77
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKE--- 202
PL+ + L +++ + I+ + + S +P + R+ L CL +
Sbjct: 78 PLMRQNVSHLIALIREIEAIEDIAMTTNGSLLPKYAKELKENGLDRVTISL-DCLDDEKF 136
Query: 203 ---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
G+ + + + I AG+ + V+ +G+ND
Sbjct: 137 RYINGRDISVNT-----------VLEGIKAAKKAGLHVKINMVVKRGMND 175
>gi|225166845|ref|YP_002650830.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
botulinum]
gi|253771364|ref|YP_003034203.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
str. 1873]
gi|225007509|dbj|BAH29605.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
botulinum]
gi|253721341|gb|ACT33634.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
str. 1873]
Length = 320
Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
+ L C + C +C +E ++ + E + +++ I +V +TGG+PLI
Sbjct: 14 ISLTEKCNLKCIYCMPKESYLEERHCTKKISN-EEIIKFLKASVNLGIKKVRYTGGEPLI 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + K++ I + + + ++ ++++ LK +G + I +
Sbjct: 73 VKD--IDKLIYDTGKIPEINDISITTNGILLY------DMVEELKNSGLK-RVNISLDTL 123
Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + I + + G+ L VLLKGINDD
Sbjct: 124 KEDRFKKITRNGDINKVFQGIDKCLSLGMTPLKINVVLLKGINDD 168
>gi|222529152|ref|YP_002573034.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222455999|gb|ACM60261.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 341
Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ L + E L I ++ E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEEV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212
+ +K+L+ + ++ +R +R P I+ E ++ LK I
Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTIELGIQSM 120
Query: 213 ANHPYEFSE------EAIAAISRLANAGIILLSQ 240
+H S + A+ + G +L Q
Sbjct: 121 FDHVLNASARGHTAQHSKNAMEMIKKFGFLLGVQ 154
>gi|158319633|ref|YP_001512140.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
OhILAs]
gi|238065284|sp|A8MLX7|RIMO_ALKOO RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|158139832|gb|ABW18144.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
OhILAs]
Length = 438
Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 25/161 (15%)
Query: 93 YPDRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
Y +R+L LK+ C +C +C + G + +D + ++ I
Sbjct: 127 YHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTM--EDILKEARNLAKQ-GI 183
Query: 145 WEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E+I D L I RL ++L+ L I+ ++ +RF V P+ I ELI+
Sbjct: 184 KELIVIAQDTTKYGLDIYGEARLPQLLEELCKIEDIEWVRF----LYVYPESITDELIKV 239
Query: 200 LKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
+ E K Y I H S+ + ++R + G + +
Sbjct: 240 VGENDKICNYFDIPIQH---ISDSVLKRMNR-KSDGASVRN 276
>gi|194336995|ref|YP_002018789.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309472|gb|ACF44172.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon
phaeoclathratiforme BU-1]
Length = 423
Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQI 144
H++ RI L + C + C +C R+ ++ ++SK A+ Y+ + I
Sbjct: 17 HKF-GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVTSKILSSGQAMHYLDQAMILSPNI 75
Query: 145 WEVIFTG-GDPLILSHKR------------------------LQKVLKTLRY--IKHVQI 177
V G GDP + L + L + HV
Sbjct: 76 AVVGIAGPGDPFANPDETMETLRLVRAKYPEMLLCMATNGLDLAPYIDELAELQVSHV-T 134
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
+ ++ P+ I E+ ++ K +Y + + ++ + A+ +L AGI
Sbjct: 135 ITINAIDPV-----IGSEIYAWVR-HNKKMYRDL--DAAKLLIDKQLEALKKLKAAGITA 186
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270
S+++ GIND+ I R EL PYY
Sbjct: 187 KVNSIIIPGINDNHVIEVA--RKVAELGADILNCMPYY 222
>gi|85860740|ref|YP_462942.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
gi|85723831|gb|ABC78774.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
Length = 345
Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + CR+C E + S+ VLS + + + + I +V TGG+PL+
Sbjct: 33 ISVTDRCNLRCRYCMPEEGIESKLGHEGVLSLEAFARVVR-LAAQVGIRKVRLTGGEPLV 91
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + ++++ + + + + + + P + + LK AG + I +
Sbjct: 92 --RRNIPQLIRYIADVPQIDDIALTTNGILFAP------MAEELKAAGLN-RVNISLDSF 142
Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + ++A AI + + + +V+++G NDD
Sbjct: 143 KEDRFRFITRVGNLDQAKKAIFKALELKMNPVKINTVVIRGFNDD 187
>gi|313638470|gb|EFS03650.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
S4-171]
Length = 335
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + I K I +
Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEI-VGFMAIMVKFGIKK 66
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 172
>gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A
[Thermococcus onnurineus NA1]
gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A
[Thermococcus onnurineus NA1]
Length = 419
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 38/199 (19%)
Query: 78 IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
I + PL G++ R + I ++ + C + C FC E S+ + D +
Sbjct: 93 IHEGMDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152
Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
+ + + +QI E G G+PL+ + ++++ LR +V+++ S +
Sbjct: 153 YLIKWFDDVAQIKGKGLEAHLDGQGEPLLYPFRV--ELVQALREHPNVRVISMQSNGTL- 209
Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231
+N L++ L EAG V +++H E + L
Sbjct: 210 ----LNDRLVEELAEAGLDRVNLSLH-----SLDPEKAKMLMGRKDYDLQHVLDMAEALV 260
Query: 232 NAGIILLSQSVLLKGINDD 250
NAG+ +L V++ GIND+
Sbjct: 261 NAGVDVLIAPVIIFGINDN 279
>gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
aestuarii DSM 271]
Length = 336
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 100/279 (35%), Gaps = 57/279 (20%)
Query: 79 GDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAA 134
+ SPLK + RY + L + C + C +C R V + +G LS + +
Sbjct: 5 HNAVSSPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSM 64
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR----------- 183
LA + + +V +TGG+PL+ + ++++ + ++ ++ + +
Sbjct: 65 LAVLARM-GVSKVRYTGGEPLLRQD--IVRLVRDAKALEGIETVSLTTNGLLLDRYLDDL 121
Query: 184 ------VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--EFSEEAIAAISRLANAGI 235
+PE + + + ++ +H+N E + I
Sbjct: 122 VAAGIDAINFSLDTFDPERYREI--TRRNLFDKVHSNLLRLLECDALLVK---------I 170
Query: 236 ILLSQSVLLKGIN-DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH--FRLTIEEGQK 292
+L LL+ +N D+ L R +P + +L H +R G
Sbjct: 171 NVL----LLRKVNIDEITTFVELTRD------RPVTVRFMELMPFDDHQIWRTGKFMGAD 220
Query: 293 -IVASLKEKIS------GLCQPFYILDLPGGYGKVKIDT 324
I+ +L G ++ LPG GKV +
Sbjct: 221 KILETLHACYPDLQPMQGDATEYFSFSLPGYKGKVSVIP 259
>gi|302037249|ref|YP_003797571.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
defluvii]
gi|300605313|emb|CBK41646.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
defluvii]
Length = 447
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 21/162 (12%)
Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
+ + + L + P + +Q P+ E + +RED + L G
Sbjct: 101 VGTQFKMNLPDYL------PAPAK-LRKQ--PEPELRHSRTIDREDFV-------LPGTA 144
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+ R LLK+ C C FC ++ + + A + E++ T
Sbjct: 145 YSDSTRALLKIQDGCDFMCSFCLI-PFARGRERSRTAEDVLREARE-LAAH-GYRELVLT 201
Query: 151 GGDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ 190
G + S++ L ++L+ L + V +R S P P
Sbjct: 202 GVNIGRYSYQGLGLVELLRELESVPDVTRIRISSIEPTTVPA 243
>gi|281413068|ref|YP_003347147.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|281374171|gb|ADA67733.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 317
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 32/221 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
+ C C FC + + G K V S D + S +E+ F GG
Sbjct: 6 VFLPYAGCKKRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V +
Sbjct: 63 LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117
Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263
E S+EA A + G +L SV L+ G+ + EIL+ L
Sbjct: 118 DEVLERSKRGYTSKEAERACKLIKKNGFVL---SVHLMVGLPRSDRRGEILSALRTVECG 174
Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
RI P + + + L +EE I + L
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215
>gi|197303727|ref|ZP_03168764.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
29176]
gi|197297247|gb|EDY31810.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
29176]
Length = 438
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 23/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R +K+ C +C +C G + S +D + + E EV+ TG
Sbjct: 150 HTRAYIKVQDGCNQFCTYCIIPYARGRVRSR--SMEDVTEEVRTLAEN-GYKEVVLTGIH 206
Query: 153 --------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + L +++ + I+ ++ +R S ++P I E + + +
Sbjct: 207 LSSYGIDFD----KERHLLDLIRAVHQIEGIERIRLGS----LEPGIITEEFAEAISKLP 258
Query: 205 KPVYIAIHA 213
K + H
Sbjct: 259 K---MCPHF 264
>gi|304439566|ref|ZP_07399471.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371945|gb|EFM25546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 433
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG--- 151
R +K+ C YC +C G + + E A ++ E++ TG
Sbjct: 144 TRSYMKVQDGCNRYCTYCIIPYARGPIRSRTI-EDSVEEAKR--LSEAGYKELVLTGIHI 200
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
D L +RL +++ + + ++ +R S ++P I + ++ +K GK
Sbjct: 201 GSYGKD---LGDERLVDLIEEITKVDGIERIRLSS----IEPITITRDFLERIKATGK-- 251
Query: 208 YIAIHA 213
+ H
Sbjct: 252 -VCDHF 256
>gi|153938937|ref|YP_001391265.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
str. Langeland]
gi|166217247|sp|A7GEQ5|MOAA_CLOBL RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|152934833|gb|ABS40331.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
str. Langeland]
Length = 319
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ K++ I ++ + + + ++++ LK+AG + I +
Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123
Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + +I + + G+ + +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|148379902|ref|YP_001254443.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 3502]
gi|153932339|ref|YP_001384199.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 19397]
gi|153937083|ref|YP_001387740.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. Hall]
gi|226949238|ref|YP_002804329.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A2 str. Kyoto]
gi|166217245|sp|A7FUZ6|MOAA_CLOB1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|166217246|sp|A5I365|MOAA_CLOBH RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|254811539|sp|C1FPG7|MOAA_CLOBJ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|148289386|emb|CAL83482.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 3502]
gi|152928383|gb|ABS33883.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. ATCC 19397]
gi|152932997|gb|ABS38496.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
str. Hall]
gi|226843612|gb|ACO86278.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A2 str. Kyoto]
gi|322806201|emb|CBZ03769.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
botulinum H04402 065]
Length = 319
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ K++ I ++ + + + ++++ LK+AG + I +
Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123
Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + +I + + G+ + +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|326201371|ref|ZP_08191243.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
gi|325988939|gb|EGD49763.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
Length = 436
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 18/128 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
+ R LK+ C +C +C + + S+ + + ++ S EV+
Sbjct: 140 KERTRAYLKIQEGCSQFCAYC-----IIPYARGPIRSRKPDDIIEEVRQLADSGFLEVVL 194
Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
TG L L +++ + I ++ +R S ++P I E ++ K
Sbjct: 195 TGIHLASYGRELEDTSLLDIIRKIHSIDGIKRIRLGS----IEPTTITKEFVEAAVGLPK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---LCPHF 255
>gi|154505328|ref|ZP_02042066.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149]
gi|153794371|gb|EDN76791.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149]
Length = 481
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 43/192 (22%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D+ L+ C C FCF +M + T+ D ++ L+++Q + T
Sbjct: 106 DQSLMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT---- 156
Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIH 212
+S +++++K L I + Q NPEL + L H
Sbjct: 157 -NMSDHDVERIVKYRLEPI-------------NISFQTTNPELRCKML-----------H 191
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
F+ EA+ + L I + Q VL KG+ND E+ + PY
Sbjct: 192 ----NRFAGEALKKVDILYRGQIEMNGQIVLCKGVNDGEELERTIRDL---TGYLPYLKS 244
Query: 273 HPDLAAGTSHFR 284
+ G + +R
Sbjct: 245 VSIVPVGLTKYR 256
>gi|152992605|ref|YP_001358326.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
gi|151424466|dbj|BAF71969.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
Length = 417
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C C +C + + +G S ++ E L I+ + E I TG
Sbjct: 135 KSRAFIKIQEGCDFRCSYCI----IPAVRGNARSHRE-ETILEQIRKLAANGFGEFILTG 189
Query: 152 GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + K+LK + I+ V+ +R S P+ +I+ E ++ L E +
Sbjct: 190 TNVGSYGRDHDTSMAKLLKKMSMIRGVRRIRIGSLEPV----QIDDEFMELLSEP----W 241
Query: 209 IAIH 212
+A H
Sbjct: 242 MAKH 245
>gi|239627307|ref|ZP_04670338.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517453|gb|EEQ57319.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 474
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 85 LMSDYRSCSNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 131
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + + +I+R + Q NPEL + L
Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKMLN--------------- 167
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ E + + L + + + Q V K +ND E+ + R P+ +
Sbjct: 168 NRFAGEKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTMDDL---ARYLPFLRSVSVV 224
Query: 277 AAGTSHFR 284
AG + FR
Sbjct: 225 PAGITRFR 232
>gi|15895263|ref|NP_348612.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
acetobutylicum ATCC 824]
gi|24212002|sp|Q97HL8|MOAA_CLOAB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|15024974|gb|AAK79952.1|AE007703_7 Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
[Clostridium acetobutylicum ATCC 824]
gi|325509409|gb|ADZ21045.1| Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
[Clostridium acetobutylicum EA 2018]
Length = 318
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 38/211 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C + Q+ +S D L I +V +TGG+PL+
Sbjct: 14 ISVTDRCNLRCIYCMPKMKGYIQENNKISCSDIFKLLRA-AVSVGINKVRYTGGEPLL-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------- 210
++ + K++ + + + + + PQ + + LK+AG K V I+
Sbjct: 71 NEEISKIIYETSKLPQINDIAITTNGIL-LPQ-----MAKDLKKAGLKRVNISLDTLKSD 124
Query: 211 --IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND-DPEILANLMRTF-VELR 265
+ + ++ I I + + +VL+KGIND + NL R VE+R
Sbjct: 125 TFTKITNFNQITK-VIDGIDTCLKLNLKPVKINTVLIKGINDLEVNDFVNLSREMPVEIR 183
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ I EG KI
Sbjct: 184 ------FIELM---------PIGEGAKIYEK 199
>gi|300856502|ref|YP_003781486.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
ljungdahlii DSM 13528]
gi|300436617|gb|ADK16384.1| predicted molybdenum cofactor biosynthesis protein A [Clostridium
ljungdahlii DSM 13528]
Length = 322
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C +E +V G +L +D + I ++ +TGG+PLI+
Sbjct: 14 ISLTDRCNLRCIYCMPKEGIVKRPYGDLLRFEDILKIIKA-AATLGINKIRYTGGEPLIM 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
++ +++ IK + + + ++ ++ LKEAG K V I++
Sbjct: 73 KD--IEYLIRETANIKGITDVAITTNGILLC------DMADKLKEAGLKRVNISLDTLKA 124
Query: 217 YE---FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + + + +I + + G+ + +VLLKG ND
Sbjct: 125 DKYKFITRCGNLDAVLKSIDKCLSIGLTPVKINTVLLKGFNDT 167
>gi|116872442|ref|YP_849223.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|123466165|sp|A0AHG0|MOAA_LISW6 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|116741320|emb|CAK20442.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 333
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 23/191 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + + I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVQF-GIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFL 176
Query: 257 LMRTFVELRIK 267
++ I+
Sbjct: 177 KFTKDKDINIR 187
>gi|297544398|ref|YP_003676700.1| MiaB-like tRNA modifying protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842173|gb|ADH60689.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 449
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S++ E L ++ S E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVKRFADSGYKEIVLTG 209
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L + L ++K + I ++ +R S P+ E ++ + +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262
Query: 205 K 205
K
Sbjct: 263 K 263
>gi|152990825|ref|YP_001356547.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
gi|151422686|dbj|BAF70190.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
Length = 410
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C C +C + G+ + L + + + E I TG
Sbjct: 129 KSRAFIKIQEGCDFRCSYCIIPYVRGNARSMDESLILEQIQKL-----ASNGFGEFILTG 183
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ L K+LK + I+ V+ +R S ++P +I E + L E +
Sbjct: 184 TNVGSYGKDKDTSLAKLLKKIAMIRGVRRIRLGS----IEPIQITDEFKEILDEP----W 235
Query: 209 IAIH 212
+A H
Sbjct: 236 MAKH 239
>gi|251798581|ref|YP_003013312.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
JDR-2]
gi|247546207|gb|ACT03226.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
JDR-2]
Length = 333
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEK 141
G H Y + + + C + C +C ++G + + +I +
Sbjct: 9 GREHDY---LRISVTDRCNLRCLYCM------PEEGMEFADASHLLSYDHIVEVVQTAAE 59
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
I ++ TGG+PLI L +++ L+ I ++ + + ++ + LK
Sbjct: 60 LGITKLRITGGEPLIRPD--LDSLIRRLKAIPGIEDIALTTNGMLLGKY------AEALK 111
Query: 202 EAGKP-VYIAIHANHPYEF-----SEEAIAAISRLANAG----IILLSQSVLLKGINDD 250
AG V I++ P F E I + AG + VLLKGIN+D
Sbjct: 112 AAGLNRVNISLDTLDPARFKFIARRGELKRVIEGIEAAGRAGLAPIKLNCVLLKGINED 170
>gi|242278011|ref|YP_002990140.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120905|gb|ACS78601.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
Length = 343
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 50/228 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L+L VC + C +C+ G + L ++ A+ ++ +I GG+P+
Sbjct: 27 TAELELSRVCDLRCIYCYAS--SGEKLNNELDFEEITDAVDQCRDLGARKIIILGGGEPM 84
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ +++ +RYI H L + RI PE+ L G I
Sbjct: 85 LYP-----RIMDVIRYI-HELGLEIELFSNGT--------RITPEIASELYSMGVQPVIK 130
Query: 211 IHANHPYEFSE----------EAIAAISR----LANAG-----IILLSQSVLLKGINDDP 251
N +A AI + L AG I + +Q+++ + +
Sbjct: 131 --FN---SLDPQIQDMLAGKKDAHKAIRQGLNNLLEAGYSKGDIPIGAQTIICRQ---NY 182
Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI--EEGQKIVASL 297
+ + R +I PY+ D H L + E+ ++ L
Sbjct: 183 AEIPEMWRWLRTRKIIPYFETITDQGRAKDHMELALNPEQIGELFDEL 230
>gi|91203193|emb|CAJ72832.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 447
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
+DP Q L ++D I N S G R LK+ C +YC +C
Sbjct: 118 DDPCIPQITSLPPYLLQNNTFQKDSIYRLNISRFHG-----HTRAFLKIEDGCDMYCSYC 172
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI----LSHKR-LQKV 165
+ + S+ + + + E++ TG +S L K+
Sbjct: 173 -----IIPYVRGAIKSRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSDGISLVKI 227
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L+ L + +R S + + + I PEL+ + E K + +H
Sbjct: 228 LERLSEFSGLGRIRL-SSIEVNE---ITPELMHLIAE-RKTICPHLHI 270
>gi|29840033|ref|NP_829139.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
gi|29834380|gb|AAP05017.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
Length = 421
Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 17/126 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + G + S+ + L I EV+ G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPIQEILDEISGLVSQGYQEVVIAG 188
Query: 152 GDPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + L +++ + IK ++ +R S +DP+ + +L L
Sbjct: 189 INVGDYQDEGKSLAHLIRQVDEIKGIERIRISS----IDPEDVQEDLRDVLLSGRHTC-- 242
Query: 210 AIHANH 215
H++H
Sbjct: 243 --HSSH 246
>gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
Length = 458
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 40/155 (25%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 90 LMDDYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 139
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
S K + ++LK +H + Q NPEL + L
Sbjct: 140 SDKDIDRILK------------YHLSPINISFQTTNPELRCKMLG--------------- 172
Query: 217 YEFSEEAIAAISRLAN--AGIILLSQSVLLKGIND 249
F+ EA+ + RL GI + Q VL KG+ND
Sbjct: 173 NRFAGEALKKVDRLCAPGTGIEINGQIVLCKGVND 207
>gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
NCIB 8327]
Length = 333
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + + C + C +C + E +K L + T A + + + I +V FTGG+P
Sbjct: 21 DYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIEVLAQM-GIRKVRFTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HA 213
L+ + ++++ + + ++F + ++ R ELI + G + + A
Sbjct: 80 LLHPD--IVELVRRAKATPGIDTVKFTTNGILL--DRYLDELIAAGLD-GINLSLDTLDA 134
Query: 214 NHPYEFS-----EEAIAAISRLAN-AGIILLSQSVLLKGINDD 250
+ + AA+ RL + + + +++L+GIN+D
Sbjct: 135 QKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177
>gi|289550128|ref|YP_003471032.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis HKU09-01]
gi|315659242|ref|ZP_07912106.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis M23590]
gi|289179660|gb|ADC86905.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis HKU09-01]
gi|315495667|gb|EFU83998.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
lugdunensis M23590]
Length = 340
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 40/175 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ E +A I + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFEEIER-IAEIYAELGVKKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
PL+ + L +++ L I+ ++ + R V I+ +
Sbjct: 77 PLL--RRNLYQLIARLNKIEGIEDIGLTTNGLLLKKHGLKLFEAGLRRINVSLDAIDNSV 134
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
Q + E I I+ G + V+ KG+NDD
Sbjct: 135 FQAINNRN--------------IKAETILDQINYAIAIGFHVKVNVVIQKGVNDD 175
>gi|194016213|ref|ZP_03054827.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
7061]
gi|194011686|gb|EDW21254.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
7061]
Length = 305
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
K +LS ++ E + + ++ TGG+PL+ L +++ L I ++ +
Sbjct: 14 NKEELLSFEEIEQLATLFAKDLGVVKIRITGGEPLMRKD--LPILIEKLSKIPGIEDIAM 71
Query: 181 ---HSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAI 227
+ +P+ + LK+AG V I++ + +P F ++ I
Sbjct: 72 TTNGTLLPVY---------AEKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGI 122
Query: 228 SRLANAGIILLSQSVLLKGIND 249
AG+ + V+ KG+ND
Sbjct: 123 EAAKKAGLAIKINMVVQKGVND 144
>gi|289550653|ref|YP_003471557.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
gi|289180185|gb|ADC87430.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
Length = 448
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVIDVIEKSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|291549892|emb|CBL26154.1| MiaB-like tRNA modifying enzyme [Ruminococcus torques L2-14]
Length = 450
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 27/131 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E L ++ + EV+ TG
Sbjct: 162 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRSMEDVLDEVRTLADNGYKEVVLTG 216
Query: 152 G---------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
D L ++++ + I ++ +R S ++P I E + + +
Sbjct: 217 IHLSSYGIDFD----KEYHLLELIRAVHEIDGIERIRLGS----LEPGIITEEFAEGIAK 268
Query: 203 AGKPVYIAIHA 213
K + H
Sbjct: 269 LPK---MCPHF 276
>gi|237807379|ref|YP_002891819.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
DSM 9187]
gi|237499640|gb|ACQ92233.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
DSM 9187]
Length = 476
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 49/258 (18%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQE 140
H+Y R+ L + C V C +C R+ G + + + A A
Sbjct: 46 PSAHHKYA-RMHLAVAPACNVQCHYCNRKYDCSNESRPGVVSELLNVEQALQKARAVAAA 104
Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQ 198
Q+ + G GDPL + L+ LR + V++ + PQ ++ L++
Sbjct: 105 IPQLSVIGIAGPGDPLANQTRTFDT-LEGLRSALPDVKLC-VSTNGLA-LPQSVDS-LVE 160
Query: 199 CLKEAGKPVYIA---IHANH------------------PYEFSEEAIAAISRLANAGIIL 237
L + + H + ++ I + +L G+++
Sbjct: 161 -LGVDHVTITMNAIDAHVSAGIYDWIYFDGVRYRGKEGAQILIDQQIEGMRKLMENGVLV 219
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE--G 290
SVL+ G+ND L+ + ++ I P GT H+ L+ +
Sbjct: 220 KINSVLIPGVND--LHLSEVSHAIRDMGAFLHNIMPL---ISKPEHGT-HYGLSGQREPT 273
Query: 291 QKIVASLKEKISGLCQPF 308
+ VA ++E+ SG+ P
Sbjct: 274 PEEVAQVRER-SGVFMPQ 290
>gi|262039459|ref|ZP_06012763.1| protein YqeV [Leptotrichia goodfellowii F0264]
gi|261746526|gb|EEY34061.1| protein YqeV [Leptotrichia goodfellowii F0264]
Length = 453
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 72 EEREDPI-GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
+ D I + +S K + R R +K+ C +C +C G + +++
Sbjct: 134 HYQVDNIFDEKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSR--ATEH 191
Query: 131 TEAALAYIQEKSQIWEVIFTGGD----PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVP 185
+ Y+ E+ EV+ TG + L L K +L+ + +K V+ +R S
Sbjct: 192 VLEEINYLGEQ-GYKEVVLTGINMSEYGLDLEPKTDFDTLLEKILAVKSVERVRVSS--- 247
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHAN 214
V P I + + LK K + +H +
Sbjct: 248 -VYPDTITDKFLGMLKNNPK-LMPHLHVS 274
>gi|253574226|ref|ZP_04851568.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251846703|gb|EES74709.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 335
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 22/171 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIF 149
R D + + + C + C +C E MV ++S ++ ++ + + ++
Sbjct: 10 RKHDYLRISVTDRCNLRCVYCMPAEGMVFQPHEEIMSYEEIAETVSAL--TPMGLRKIRL 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
TGG+PL+ L++++ L I ++ + + + + LK+AG K V
Sbjct: 68 TGGEPLVRKD--LEQLVAMLSSIPGIEDIALTTNG------MFLAKKAELLKQAGLKRVN 119
Query: 209 IAIHANHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
I++ + F+ I G + VL+KGIN+D
Sbjct: 120 ISLDSLRQDRFAMITRGGEVEKVLEGIQAAVEVGFEPIKLNVVLMKGINED 170
>gi|193214740|ref|YP_001995939.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton
thalassium ATCC 35110]
gi|193088217|gb|ACF13492.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton
thalassium ATCC 35110]
Length = 423
Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 73/218 (33%), Gaps = 57/218 (26%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
RI L + C + C FC R+ ++ ++SK E A+ Y+ I V
Sbjct: 20 GRIHLPVAPKCNIQCNFCNRKFDCLNENRPGVTSKVLSPEQAVHYLGNALEISPNIAVVG 79
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198
G GDP + +K ++++R + V P EL +
Sbjct: 80 IAGPGDPFANPDET----------MKTLRLVREKYPEMLLCVATNGLNVLPY--IDELAE 127
Query: 199 CLKEAGKPVYIAI-----------HANHPYEF--SEEAIA--------AISRLANAGIIL 237
L+ + + I H E+A A+ +L GI
Sbjct: 128 -LQVSHVTITINAVSPKVGAEVYAWVRHQKRVLRDEQAAETLLENQLAALKKLKEKGITA 186
Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYY 270
++++ GIND + ++ L + PYY
Sbjct: 187 KVNTIIIPGINDHHVLEVAKTVSELGADILNT--LPYY 222
>gi|313888926|ref|ZP_07822586.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845099|gb|EFR32500.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 432
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 18/126 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ E ++ + E++ TG
Sbjct: 143 RTRAYMKVQDGCNRFCTYC-----IIPFARGPIRSRTIEDSVREARTLADRGFKEIVLTG 197
Query: 152 GD----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ L RL +++ + + ++ +R S V+P I + ++ + GK
Sbjct: 198 IHIGSFGMDLGDMRLIDLIEAIAEVDGIERIRLSS----VEPIIITDDFMERAVKTGK-- 251
Query: 208 YIAIHA 213
+ H
Sbjct: 252 -LCDHF 256
>gi|307570581|emb|CAR83760.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
L99]
Length = 333
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYI---AIHANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
V I ++HA+H + ++ + I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADHFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|313669401|ref|YP_004049828.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
gi|313156598|gb|ADR35275.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
Length = 321
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C CR+C + K +LS ++ A + I + I ++ TGG+P
Sbjct: 15 VSVTERCNFRCRYCMAEKPFSWVPKENLLSYEELFAFIK-IGIDNGIQKIRLTGGEP--T 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCLKEAG-KPVYIAI 211
+ + L +++ HS P VD P L LK+AG + V I++
Sbjct: 72 TRENLDELIAM-----------IHSYAPDVDIGLTTNGYLLPSLAHKLKKAGLRRVNISL 120
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + E + I AG+ + SV+L+ IN++
Sbjct: 121 DSLDRNTLHYIAQKDVLPEILQGIEAAVEAGLSVKINSVILRNINEN 167
>gi|329731179|gb|EGG67549.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU144]
gi|329735413|gb|EGG71704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU028]
Length = 340
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121
Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
I + N E + I A + L + G + V+ KG+NDD
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDD 175
>gi|150015722|ref|YP_001307976.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
8052]
gi|149902187|gb|ABR33020.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
8052]
Length = 432
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150
R LK+ C +C +C SKD + L I+ S+ E+I +
Sbjct: 139 KTRAFLKIQDGCNRFCAYCLI-----PYTRGTTCSKDPQKVLDEIKNLSEHGFKEIILSG 193
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D + + L +L+ + + ++ +R S ++P E+I+ +K+
Sbjct: 194 IHTASYGVD--LDGNVTLITLLEEIEKLDGIERVRIGS----IEPSFFTDEVIEKMKKMK 247
Query: 205 K 205
K
Sbjct: 248 K 248
>gi|119356568|ref|YP_911212.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
266]
gi|119353917|gb|ABL64788.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
266]
Length = 333
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 17/180 (9%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + C + C +C R + LSS++ + + I ++ F
Sbjct: 16 QRHIEYARIAVTAHCNLRCTYCMREEHEYHTIADPELSSREVGKIIVALAS-IGIKKIRF 74
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LK 201
TGG+PL+ + +++ + I ++ + + ++ R ELI L
Sbjct: 75 TGGEPLLRKD--ISVLVRQAKSIAGIKTVSLTTNGILL--DRHLDELIDAGLDAINLSLD 130
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT 260
+ Y+A EF + LA A + V+++G+N D+ + L RT
Sbjct: 131 TLDRERYLA--ITRRNEFDRVMSNLETLLAKATFPVKLNVVMMRGVNGDEIKDFIELTRT 188
>gi|332830635|gb|EGK03241.1| nitrogenase cofactor biosynthesis protein NifB [Dysgonomonas gadei
ATCC BAA-286]
Length = 420
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 80/267 (29%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEK----SQI 144
H+Y R+ L + C + C +C R+ ++ ++S ++ Y++ I
Sbjct: 16 HKYA-RVHLPVAPKCNIQCNYCNRKYDCCNESRPGVTSTILSPLQSVHYMKALSEKIPNI 74
Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
V G GDP + + L Q +R Q+ P+LI CL
Sbjct: 75 SVVGIAGPGDPFANAEETL-------------QTMRLA--------QKEFPDLIFCLSSN 113
Query: 204 GKPVYI---------AIHAN-HPYEFSEEAIAAI-------------------------- 227
G + H + E +A I
Sbjct: 114 GLDLAPYIDEIAEIGVSHVTITVNSLNPETLAKIYRWVRYKRRVYRGEEGAKVLLEQQLY 173
Query: 228 --SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGT 280
+L I + +V+ GIND + +L + EL P Y T
Sbjct: 174 CIQKLKEKNITVKINTVICPGIND--HEIEDLAKKVAELGADTMNCIPMY-----PTENT 226
Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQP 307
F + E ++++ +K +IS +P
Sbjct: 227 E-FEILKEPSKEMMKDIKARISKYIKP 252
>gi|312376680|gb|EFR23697.1| hypothetical protein AND_12429 [Anopheles darlingi]
Length = 708
Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + L C + C++C E V +QK +L+S++ + ++ T
Sbjct: 183 RFHTYLRISLTERCNLRCKYCMPAEGVQLTQKDKLLTSEEVIRLANLFVA-EGVRKIRLT 241
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + L +++ L+ I +++ + + + + +L+ L AG +
Sbjct: 242 GGEPTVRKD--LPEIVSQLKAIPNLESVGITTNGLM-----LTRQLV-GLHRAGLD-ALN 292
Query: 211 IHANHPYEFSEEAIAAISRLAN--------AGIILLSQ--------SVLLKGINDD 250
+ +A ++ AGI L SQ VL+KG NDD
Sbjct: 293 V------SLDTLKVARYEQITRRKGWERVIAGIDLASQLGYRPKVNCVLMKGFNDD 342
>gi|115360432|ref|YP_777569.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
AMMD]
gi|115285760|gb|ABI91235.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
Length = 372
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 91/248 (36%), Gaps = 61/248 (24%)
Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
PL + P R L L ++ C C +C R+ G + SS+ A L I
Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88
Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQI---------------LR 179
+ ++ TGG+PL+ + L+ +++ L + K V+I LR
Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTLDGKPVEIALTTNGSLLAAKARSLR 146
Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
SRV + I+ + + + +A PV + A I AG
Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
+ +V+ +G+NDD + L+R F + Y G S + +
Sbjct: 193 VKVNAVIERGVNDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245
Query: 289 EGQKIVAS 296
++++ +
Sbjct: 246 RMRELIEA 253
>gi|308070127|ref|YP_003871732.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
gi|305859406|gb|ADM71194.1| Molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
Length = 338
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 40/175 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G + LS ++ + ++ TGG+
Sbjct: 19 ISVTDRCNFRCSYCMPKEIFGDDYAFLPQNECLSFEEIHRLTKLFVS-LGVKKIRLTGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
PL+ + L ++ + I V+ + R V + PEL
Sbjct: 78 PLM--RRNLPDLVSQILSIDGVEDIGLTTNGVLLGQQAKPLYDAGLRRLNVSLDALAPEL 135
Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L G KP +I + E G + V+ KG+ND
Sbjct: 136 FGRLNGRGIKPDFILKQIEYAREI--------------GFEIKVNMVVQKGVNDS 176
>gi|256371930|ref|YP_003109754.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008514|gb|ACU54081.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 375
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152
P +L + CP+ C C R + + L++ + A + + + VI FTGG
Sbjct: 18 PRLVLWETTQACPLACVHC-RANAISTPDPDELTTAEGFALIDDLAAVAGPRPVIVFTGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
DPL L + HV + P V +RI P + L +AG I+I
Sbjct: 77 DPLS-RPDLLDLIAHAAARGLHVAV------SPAVS-ERITPATLTALYDAGAR-AISIS 127
Query: 213 A-----NH--PYEFSEEA---IAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMRT 260
NH A + A++ + G+ + ++ +V+ +ND P + ++
Sbjct: 128 LDGLGRNHDATRRVPGHALRTLEALTMARSVGLRVQVNTTVMRTTVNDLPAVAEAMLAR 186
>gi|256827121|ref|YP_003151080.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
gi|256583264|gb|ACU94398.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
Length = 455
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 42/179 (23%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + + C C FCF + + L+ +D + L+++Q V FT
Sbjct: 80 SKAIFDEVIQCRNACMFCF-MRQLPDDVRSSLTLRDDDFRLSFLQG----TFVTFT---- 130
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ ++++ H+ LR+ + PE+ + + V I
Sbjct: 131 -NLTPADEARIIEQ-----HISPLRYSLHA-------VTPEVRRRMIGPRASVGI----- 172
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM-----RTFVELRIKP 268
A RL AGI L +Q VL+ G+ND E+ L + I P
Sbjct: 173 ----------EAAERLLQAGIELHAQIVLMPGVNDGAELAQTLSWAWKHEGIRSVGIVP 221
>gi|219668949|ref|YP_002459384.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219539209|gb|ACL20948.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 440
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + + +C C FCF + T +++ ++ + TGG+P
Sbjct: 89 GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
L+ + L L K + H+R ++ E++Q LK+AG + +I
Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202
Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
P +E I+ L+ I ++ + +L G + ++ + I
Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252
>gi|89894518|ref|YP_518005.1| hypothetical protein DSY1772 [Desulfitobacterium hafniense Y51]
gi|89333966|dbj|BAE83561.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 440
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + + +C C FCF + T +++ ++ + TGG+P
Sbjct: 89 GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
L+ + L L K + H+R ++ E++Q LK+AG + +I
Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202
Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
P +E I+ L+ I ++ + +L G + ++ + I
Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252
>gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
V453]
Length = 334
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ A L + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ L+ +++ + I+ +Q + + + P + LKEAG
Sbjct: 66 VRLTGGEPLVRKD--LENLVRMIASIEGIQDISLTTNGI------MLPSKARLLKEAGLT 117
Query: 206 --PVYI-AIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + ++H + + + I AG+ + VL+KG N+D
Sbjct: 118 RINISLDSLHEERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNED 171
>gi|92112102|gb|ABE73736.1| putative Fe-S oxidoreductase [Azoarcus communis]
Length = 359
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 28/166 (16%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVI 148
D ++L + C C FC EM + + + + + L I+ + + V
Sbjct: 81 DSLILPVTDGCSWNKCTFC---EMYTAPQKAFRARGE-DEVLESIRRTGERYGNQVRRVF 136
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD L+L +RL L+ +R +H+ + R S + R ++ L EAG +
Sbjct: 137 LADGDALVLPTRRLLSYLEAIR--EHLPAVHRVSSYCLARNLARKTVAELRTLAEAGLKL 194
Query: 208 Y----------IAIHANHPYEFSEEAIAAISRLANAGI----ILLS 239
+ N E E AA+ +L AGI ++L+
Sbjct: 195 AYLGAESGDDEVLARVN-KGETFESTRAALDKLGEAGISRSVMILN 239
>gi|300817404|ref|ZP_07097621.1| radical SAM domain protein [Escherichia coli MS 107-1]
gi|300530030|gb|EFK51092.1| radical SAM domain protein [Escherichia coli MS 107-1]
Length = 372
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 14/126 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYIQEKSQIWE----V 147
D IL+K C + C +C+ + ++ E + I E S + E +
Sbjct: 3 DTILIKTASRCNLDCTYCYVYRGADTSWQDQPYRMNDATIEKVVERITEYSLLQETGFAI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ GG+PL+L +RL+ +L LR + + Q + + + I +++ +
Sbjct: 63 VLHGGEPLLLGERRLESLLSGLRRVLNPQKYPISIQTNGVL-----ITEKILNLCSKYRV 117
Query: 206 PVYIAI 211
+ ++I
Sbjct: 118 SISVSI 123
>gi|218886327|ref|YP_002435648.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218757281|gb|ACL08180.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 361
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 17/161 (10%)
Query: 99 LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L + C + C +C+ + VL ++ + + + + +V TGG+P
Sbjct: 25 LSVTDRCNLRCSYCWGCSEMRFI--PHDDVLRYEEMARIVD-VAVEEGVEKVRLTGGEPF 81
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
+ K L L L +R + ++ P ++ L + + +
Sbjct: 82 V--RKGLTGFLDMLHRRHPALDIRITTNGTLLAPH---AAALRGLGVSTVNISLDTFRRD 136
Query: 212 --HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
A + + + I +AG+ + +V LKG+NDD
Sbjct: 137 RFAATTGRDMLPQVLEGIHAALDAGLAVKINAVALKGVNDD 177
>gi|222529567|ref|YP_002573449.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456414|gb|ACM60676.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 429
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C +YC+ C+ + + + LS + A+ ++ + ++I +GG+P + +
Sbjct: 91 LHYTNKCNLYCKGCYSYDQNRNDESQDLSMEYFLEAVKQLKTY-GLDKIIISGGEPTLRN 149
Query: 159 H-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
K LK + I ++ ++ + +P L+ ++E V ++I
Sbjct: 150 DLDEFIKYLKEILDINYIVLITNGTNLP--------HNLLHTIREYVDDVAVSI------ 195
Query: 218 EFSEEAIAAISRLANAGI--ILLSQSVLLK--GINDDPEILANLMRT 260
+ I+ + GI I+++ LLK GIN ++A L R
Sbjct: 196 ---DGYEEGITFIRPTGIHKIVMNNIALLKEAGIN--VSMIATLHRK 237
>gi|84497391|ref|ZP_00996213.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649]
gi|84382279|gb|EAP98161.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649]
Length = 515
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 36/194 (18%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+ L + ++ +L LL C + C CF + S E LA
Sbjct: 91 PVPSAYEDGLPQMQTQHTCILLEDLLDHCNLKCPTCF-----AESSPALASVAPLEQVLA 145
Query: 137 YI-----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
I +E +I ++ +GG+P++ +L+++L+ + V+IL ++ R
Sbjct: 146 SIDTRLSRENGRIDVLMLSGGEPMLYP--QLEELLEAVIARPIVRIL-INTNGL-----R 197
Query: 192 I--NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------------AISRLANAGI-I 236
+ + EL+ L+ + V + + + E +E +IA AI RL+ AG+
Sbjct: 198 VAQDDELVALLRRHRERVEVYLQYD--GESAEASIAHRGADIRRFKERAIERLSAAGVFT 255
Query: 237 LLSQSVLLKGINDD 250
L+ + L G+NDD
Sbjct: 256 TLTMTASL-GVNDD 268
>gi|145220155|ref|YP_001130864.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
vibrioformis DSM 265]
gi|145206319|gb|ABP37362.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
phaeovibrioides DSM 265]
Length = 420
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 53/216 (24%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
RI L + C + C +C R+ ++ +SSK AL Y++ I V
Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVSSKLLSPGQALHYLKAAVELSPNISVVG 79
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198
G GDP + ++ ++++R + + P EL +
Sbjct: 80 IAGPGDPFANPDET----------METLRLVRKEYPEMLLCVATNGLNLLPY--IDELAE 127
Query: 199 CLKEAGKPVYIAI-----------HANHPYEFSEEAIAA----------ISRLANAGIIL 237
L+ + + I H + + AA + L GI
Sbjct: 128 -LEVSHVTITINAIDPAVGAEIYAWVRHEKKMHRDIEAAELLIGKQLEGLKELKARGITA 186
Query: 238 LSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270
++++ G+ND E +A + + L PYY
Sbjct: 187 KVNTIIIPGVNDHHVETVARTVASLGADILNCLPYY 222
>gi|307721185|ref|YP_003892325.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
16294]
gi|306979278|gb|ADN09313.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
16294]
Length = 424
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G + +A + E I TG +
Sbjct: 142 KSRAFIKIQEGCNFRCSYCIIPYVRGD--ARSMDENRILEQVARLAIN-GFGEFILTGTN 198
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L K++K + I+ V+ +R S V+P +I E + L E ++
Sbjct: 199 VGSYGQDTKTSLAKLMKKMSQIRGVRRIRLGS----VEPIQITDEFKEILDEPWMEKHMH 254
Query: 211 IHANH 215
I H
Sbjct: 255 IALQH 259
>gi|317052447|ref|YP_004113563.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Desulfurispirillum indicum S5]
gi|316947531|gb|ADU67007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Desulfurispirillum indicum S5]
Length = 236
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
H C + CR+C +V Q G + L YI QI V TGG+PL +
Sbjct: 29 THGCNLRCRYCHNPALVLGQPG----RSRQDQLLEYIDRH-QIGAVAITGGEPLF--QRE 81
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
L+ +L+ LR + +R P R+ L Q L +
Sbjct: 82 LETLLQQLRS----RKIRIKLDTNGTLPHRLKQVLEQELVDF 119
>gi|89898549|ref|YP_515659.1| hypothetical protein CF0742 [Chlamydophila felis Fe/C-56]
gi|89331921|dbj|BAE81514.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 421
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C + G + + + + E + + EV+ G +
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-SRPAREVLEEISGIVSQ--GYREVVIAGIN 190
Query: 154 PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ L +++ + I+ ++ +R S +DP+ + +L L +GK
Sbjct: 191 VGDYQDEGHSLAHLIRRVDEIEGIERIRISS----IDPEDVQEDLRDVLL-SGKHTC--- 242
Query: 212 HANH 215
H++H
Sbjct: 243 HSSH 246
>gi|297621456|ref|YP_003709593.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
gi|297376758|gb|ADI38588.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
Length = 433
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R +K+ C +C +C + G + + + E I E++ TG
Sbjct: 137 HTRAFVKVQDGCNSFCTYCIIPYVRGRSRSRTMG-QVLEEVKDLIAN--GYKEIVLTGIN 193
Query: 153 ----DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGK 205
D +RL +++K + + ++ LR S +DP ++ E+++ + K+ +
Sbjct: 194 IGDFDGGADEPRRLAELVKEVDAVPGLERLRVSS----IDPDEVDDEMLETIINGKKTCR 249
Query: 206 PVYIAIH 212
++I +
Sbjct: 250 SMHIVLQ 256
>gi|291522742|emb|CBK81035.1| MiaB-like tRNA modifying enzyme [Coprococcus catus GD/7]
Length = 454
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 24/159 (15%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q+I D + + + R +K+ C +C +C
Sbjct: 112 QYIQDNRHTEDRDAYVADIAHSHEYETMHIETVSEHTRAYIKIQDGCNQFCSYCIIPYAR 171
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-----------------GDPLILSHKR 161
G + + +D + + E++ TG D + +
Sbjct: 172 GRVRSRKM--EDILQEVRNLTAN-GYKEIVLTGIHISSYGLDFEHTADEQEDYVPFKNSA 228
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
L +++ L I+ ++ +R S ++P+ I ++ L
Sbjct: 229 LIDLIEALSGIEGLERIRLGS----LEPRIITENFVRRL 263
>gi|254478005|ref|ZP_05091389.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214036009|gb|EEB76699.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 292
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 96 RIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R+L L + C + C +C +K +L +D E + + + + E++ TGG+P
Sbjct: 3 RVLGLIVTSDCNLRCSYCDYSNKRRDKKSNLLV-EDVERFILAMSDYMNLGEIMITGGEP 61
Query: 155 LILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+LS+ ++ + T++ ++ IL + I+ E I+ LK+ V+I+I
Sbjct: 62 FLLSN--IEYWILTMKKYSPNISILTNGT--------LIDSEQIRWLKKHSVTVHISI 109
>gi|332157839|ref|YP_004423118.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2]
gi|331033302|gb|AEC51114.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2]
Length = 419
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 41/188 (21%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138
G++ R + I ++ C + C FC R+ ++ + A
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDVDYLMKWFNWVAE---- 163
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
Q+ + + G+PL+ + ++++ LR +V ++ S + +N +L++
Sbjct: 164 QKGKGLEAHLDAQGEPLLYP--FIVELVQALRDHPNVSVISMQSNGVL-----LNDKLVE 216
Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSV 242
L EAG V ++IH E + L NAGI +L V
Sbjct: 217 ELAEAGLDRVNLSIH-----SLDPEKAKMLMGRKDYDLEHVLEMAEALVNAGIDVLIAPV 271
Query: 243 LLKGINDD 250
++ GIND+
Sbjct: 272 IIFGINDN 279
>gi|229166606|ref|ZP_04294358.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
gi|228616860|gb|EEK73933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
Length = 338
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L ++++ L I V+ +
Sbjct: 77 PLLRKD--LPELIQRLNEIDGVEDI 99
>gi|94496981|ref|ZP_01303555.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
SKA58]
gi|94423657|gb|EAT08684.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
SKA58]
Length = 326
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C M + VLS ++ + I ++ TGG+PL+
Sbjct: 14 ISVTDRCDLRCRYCMAERMHFLPRDQVLSLEEIALLADLFIAR-GITKIRLTGGEPLVRR 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV----PIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ ++++ + S + + R++ + V +++ +
Sbjct: 73 D--IGELVRRIGRH-------LGSGLDELTLTTNATRLDSHAQDLFDAGVRRVNVSLDSR 123
Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
P F++ A + AG+ + V LKGINDD
Sbjct: 124 DPARFADVTRGGDIGRVFAGLDAARAAGLAVKINMVALKGINDD 167
>gi|172056823|ref|YP_001813283.1| RNA modification protein [Exiguobacterium sibiricum 255-15]
gi|171989344|gb|ACB60266.1| RNA modification enzyme, MiaB family [Exiguobacterium sibiricum
255-15]
Length = 444
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + K + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRQPEDVLKQAQQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209
GG L L K+LK L + ++ LR S ++ +I E++ LK++ P+ +
Sbjct: 200 GGYGEDLKDYNLAKLLKALESVTGLERLRISS----IEASQITDEVLDVLKDS--PIVVR 253
Query: 210 AIHA 213
+H
Sbjct: 254 HLHV 257
>gi|32266379|ref|NP_860411.1| hypothetical protein HH0880 [Helicobacter hepaticus ATCC 51449]
gi|32262429|gb|AAP77477.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 423
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C C +C V + + E + + + + EV+ TG +
Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PFVRGKARSYPQKSILEQ-IRALAQNGK-TEVVLTGTN 191
Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGK 205
L L +++K + + ++ LR S ++P +I+ EL + L+ E
Sbjct: 192 VGSYGKDLKDYNLARLIKDIYSLGVLKRLRVGS----LEPSQIDSELKESLELPFMEKHL 247
Query: 206 PVYI 209
+ +
Sbjct: 248 HIAL 251
>gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
Length = 362
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 42/183 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152
+ + C + CR+C RE+ G + +L+ ++ A A+I+ + ++ TGG
Sbjct: 18 ISVTDRCNMRCRYCMPREIFGPNFTFLPRSELLTFEEITRIAAAFIRA--GVRKIRLTGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQIL----------RF-------HSRVPIVDPQRINPE 195
+PL+ + L +++ L + V L R+ R V +NP
Sbjct: 76 EPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLLARYARPLRDAGLRRVTVSLDTLNPA 133
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIND-DPEI 253
L + P+ + +A I +AG + +V+ +G+ND D E
Sbjct: 134 TFSRLADTDIPL-------------DNVLAGIDAAQSAGFFPIKLNAVIRRGVNDGDVEE 180
Query: 254 LAN 256
LA
Sbjct: 181 LAA 183
>gi|194334439|ref|YP_002016299.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
aestuarii DSM 271]
gi|194312257|gb|ACF46652.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
aestuarii DSM 271]
Length = 424
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 76/214 (35%), Gaps = 49/214 (22%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
RI L + C + C +C R+ ++ ++SK AL Y I+ I V
Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSKVLSPHQALHYLDKAIELSPNISVVG 79
Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181
G GDP + ++ ++ L + HV L +
Sbjct: 80 IAGPGDPFANPEETMETLRLVREKYPDMLLCVATNGLNVMPYIEELAQLQVSHV-TLTIN 138
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
VDP+ I E+ ++ K +Y N E +AA+ +L G+ +
Sbjct: 139 ----AVDPE-IGSEIYAWVR-HRKKMYRDT--NAAKILLESQLAALKKLKEIGVTAKVNA 190
Query: 242 VLLKGINDD-----PEILANLMRTFVELRIKPYY 270
+++ G+ND + +A L PYY
Sbjct: 191 IVIPGVNDKHVAEVAKTVAELGADIF--NCLPYY 222
>gi|320161123|ref|YP_004174347.1| oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994976|dbj|BAJ63747.1| oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 395
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 57 ARQFIP-QKEELNILPEEREDPIGDNNHSPLKGIVH-RYPD--RILLKLLHVCPVYCRFC 112
Q +P E +P E + + + I+H R PD ++ ++ C ++C C
Sbjct: 11 RLQ-LPFSFLERRQMPAGAEYWLDERDG---DLILHPRKPDVRKLYIEPTTGCNLHCVTC 66
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY 171
R V + +S + E L I ++ V+FTG G+PL + + +++ +R
Sbjct: 67 IRN--VWEDEEAQMSMQTFERILEGIDHLPELKRVVFTGFGEPLTHKN--IFDMIEEIRR 122
>gi|289434309|ref|YP_003464181.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289170553|emb|CBH27093.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 333
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + I K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSQDEIVGFME-IMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|16800108|ref|NP_470376.1| molybdenum cofactor biosynthesis protein A [Listeria innocua
Clip11262]
gi|24211995|sp|Q92CY2|MOAA_LISIN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|16413498|emb|CAC96270.1| lin1039 [Listeria innocua Clip11262]
Length = 333
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|71908225|ref|YP_285812.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
gi|71847846|gb|AAZ47342.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
Length = 327
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 27/177 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + G ++ LS + E + + V TGG+PL+
Sbjct: 19 LSVTDRCDLRCAYCMPSDFSGYEEPEHWLSFDEIERLVGLFARF-GLRRVRLTGGEPLM- 76
Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
K L + + ++ I V+ L +++ + Q L++AG + +++
Sbjct: 77 -RKGLAGLARRIKAIPGVEDLSLSTNGTQL---------RKHGQALRDAGVDRLNVSLDT 126
Query: 214 NHP---YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDP-EILANLMRT 260
P E + + +A ++ G + V L G+NDD E + + R
Sbjct: 127 LQPARFAEITRRDALADVLAGLATAREIGFAPIKINMVWLAGVNDDELEAMVDFCRQ 183
>gi|313624269|gb|EFR94317.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
J1-023]
Length = 333
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|168217043|ref|ZP_02642668.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182625833|ref|ZP_02953599.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177908867|gb|EDT71359.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380957|gb|EDT78436.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
Length = 445
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L C C FCF ++ + T+ D ++ L+++Q V T
Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + + +++K RI+ P+ +++H +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154
Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
F+ + +LA AGI + +Q V++ GIN + + L + +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210
>gi|110802540|ref|YP_699042.1| hypothetical protein CPR_1727 [Clostridium perfringens SM101]
gi|168207283|ref|ZP_02633288.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|169342694|ref|ZP_02863735.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|110683041|gb|ABG86411.1| conserved hypothetical protein [Clostridium perfringens SM101]
gi|169299200|gb|EDS81270.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|170661336|gb|EDT14019.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 445
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L C C FCF ++ + T+ D ++ L+++Q V T
Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + + +++K RI+ P+ +++H +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154
Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
F+ + +LA AGI + +Q V++ GIN + + L + +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210
>gi|18310738|ref|NP_562672.1| hypothetical protein CPE1756 [Clostridium perfringens str. 13]
gi|110800057|ref|YP_696442.1| hypothetical protein CPF_2009 [Clostridium perfringens ATCC 13124]
gi|168210611|ref|ZP_02636236.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|168214233|ref|ZP_02639858.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|18145419|dbj|BAB81462.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110674704|gb|ABG83691.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
gi|170711255|gb|EDT23437.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170714325|gb|EDT26507.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
Length = 445
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L C C FCF ++ + T+ D ++ L+++Q V T
Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + + +++K RI+ P+ +++H +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154
Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
F+ + +LA AGI + +Q V++ GIN + + L + +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210
>gi|290893803|ref|ZP_06556782.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-071]
gi|290556630|gb|EFD90165.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-071]
Length = 333
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|254828424|ref|ZP_05233111.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL N3-165]
gi|258600819|gb|EEW14144.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL N3-165]
Length = 333
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|238917088|ref|YP_002930605.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
gi|238872448|gb|ACR72158.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
Length = 446
Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 20/127 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C + G + +D + + + EV+ TG
Sbjct: 149 HTRAYIKIQDGCNQFCSYCIIPYVRGRVRSR--KPEDIVNEVKTLAAT-GVKEVVLTGIH 205
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++++ + I+ ++ +R S ++P+ I E + + K
Sbjct: 206 ISSYGTD---LENISLIELIEAIHEIEGIKRIRLGS----LEPRIITEEFAKRIAGLEK- 257
Query: 207 VYIAIHA 213
I H
Sbjct: 258 --ICPHF 262
>gi|242371916|ref|ZP_04817490.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W1]
gi|242350423|gb|EES42024.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W1]
Length = 340
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G K +L+ + ++ I + + ++ TGG+
Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMTR-ISRIYAELGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L ++++ L I+ ++ + + LK+ G+ +Y
Sbjct: 77 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + ++ AI+ +L Q V+ KG+NDD
Sbjct: 122 RINVSLDA---IDDQVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 175
>gi|313609517|gb|EFR85068.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL F2-208]
Length = 333
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|299537483|ref|ZP_07050777.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
fusiformis ZC1]
gi|298727044|gb|EFI67625.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
fusiformis ZC1]
Length = 338
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 91/270 (33%), Gaps = 56/270 (20%)
Query: 90 VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
+HR P R L + + C CR+C E+ G +LS + E + I
Sbjct: 8 LHR-PLRDLRISVTDRCNFRCRYCMPAEVFGPDYAFLPSDKILSFDEIERLVK-IFVSLG 65
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVP 185
+ ++ TGG+PL+ L +++ + IK V+ + + RV
Sbjct: 66 VKKIRITGGEPLLRRD--LPELIARIHRIKGVEDIALTTNGSLLKKYAQPLAQAGLARVS 123
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
+ + + GK + + I + A AG+ + V+ K
Sbjct: 124 VSLDSLDDERFFEMNGYRGKVL--------------PVLEGIEKAAEAGLQVKINMVVQK 169
Query: 246 GIND-DPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLKEKIS 302
G N+ D +A LR Y ++ +RL + ++I+ + +
Sbjct: 170 GKNEQDIVTMAQFFKEKQHILRFIEY-----MDVGNSNGWRLDDVVSKKEIIEQIHQFTP 224
Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
QP P G+V G
Sbjct: 225 --LQPV----APNYKGEVATRYQYQDAQGE 248
>gi|327311114|ref|YP_004338011.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
768-20]
gi|326947593|gb|AEA12699.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
Length = 370
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 100/307 (32%), Gaps = 69/307 (22%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEVI 148
+ P + ++ CP+ CR C ++ G + + + E + + + ++ I
Sbjct: 12 KRPLLVFWEVTRACPLACRHCRADAILKPLPGELSTWEAKAFLEQLVDFGRPPPEL---I 68
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
TGGDPL+ L ++L + + +P ++ L + L E +
Sbjct: 69 VTGGDPLMRLD--LMEILDYAKELG----------IPTSLAPAVSKNLFEALPELRGRIK 116
Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+I + E EE AI L AGI + +V+ + L ++
Sbjct: 117 SASISLDGLKEVHEELRGVPGVFDSTIEAIKALMGAGIRVQVNTVVWRK---SFPQLPDV 173
Query: 258 MRTFVELRIKPYYLHHPD---------LAAGTSH-----FRLTIEE-GQKI-------VA 295
+ +L ++ + + + + F + G +I
Sbjct: 174 FKLIYDLGVRVWEVFFLIETGRAVKALDISPQEYEDAVQFLVDASRYGVQIRTVEAPFYR 233
Query: 296 SLK-EKISG--LCQPFY------ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH- 345
K ++ SG P Y + +L G K +D + + V+
Sbjct: 234 RAKIQRASGLSYTSPAYEKLVARLRELMGEP-KKPLDPTVVPTRDGHGIIFVAYDGTVYP 292
Query: 346 ----DYP 348
YP
Sbjct: 293 SGFLPYP 299
>gi|310779510|ref|YP_003967843.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
gi|309748833|gb|ADO83495.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
Length = 437
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R +K+ C +C +C + + + + A+ I K E+I G +
Sbjct: 147 SRAYIKIQDGCNNFCSYC-KIPFARGKSRSRKLKSILKEAV--ILAKEGFKEIIIIGINL 203
Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + + +L + + ++ +R S + P +I+ I+ +K K +
Sbjct: 204 GVYGEDIPENGDFETLLDEISKVDGIERIRIGS----MYPDKISDRFIELMKNNSK-LMP 258
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + +E + A++R
Sbjct: 259 HLHIS-LQSCDDEILKAMNR 277
>gi|170735545|ref|YP_001774659.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
gi|169821583|gb|ACA96164.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
Length = 374
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P
Sbjct: 46 LSVIDQCNFRCGYCMPRESFGTDYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR SRV + +
Sbjct: 106 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G+NDD
Sbjct: 163 DDAVFRRMNDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208
Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ L+R F + Y G S + + ++++
Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255
>gi|224500308|ref|ZP_03668657.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
Finland 1988]
Length = 333
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|16803087|ref|NP_464572.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
EGD-e]
gi|47096135|ref|ZP_00233735.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 1/2a F6854]
gi|224502639|ref|ZP_03670946.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-561]
gi|254830184|ref|ZP_05234839.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
10403S]
gi|254898780|ref|ZP_05258704.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J0161]
gi|254911731|ref|ZP_05261743.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J2818]
gi|254936057|ref|ZP_05267754.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
F6900]
gi|255029181|ref|ZP_05301132.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
LO28]
gi|284801379|ref|YP_003413244.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5578]
gi|284994521|ref|YP_003416289.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5923]
gi|24211990|sp|Q8Y870|MOAA_LISMO RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|16410449|emb|CAC99125.1| lmo1047 [Listeria monocytogenes EGD-e]
gi|47015484|gb|EAL06417.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 1/2a F6854]
gi|258608646|gb|EEW21254.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
F6900]
gi|284056941|gb|ADB67882.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5578]
gi|284059988|gb|ADB70927.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
08-5923]
gi|293589681|gb|EFF98015.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
J2818]
Length = 333
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|315281772|ref|ZP_07870331.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
S4-120]
gi|313614582|gb|EFR88167.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
S4-120]
Length = 333
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LKEAG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|282908895|ref|ZP_06316713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|283958340|ref|ZP_06375791.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|282327159|gb|EFB57454.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|283790489|gb|EFC29306.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
A017934/97]
Length = 448
Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|302333252|gb|ADL23445.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|254519873|ref|ZP_05131929.1| predicted protein [Clostridium sp. 7_2_43FAA]
gi|226913622|gb|EEH98823.1| predicted protein [Clostridium sp. 7_2_43FAA]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C GS + + E E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCTYCIIPYSRGSVCSKDPKK--VLEEVNKLAEH-GFKEIILSGIH 197
Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L +++ + ++ ++ +R S ++P PE+I+ +K+ K
Sbjct: 198 TASYGLDLEGSVNLIDIIEEIEKVEGIERIRIGS----IEPAFFTPEVIEKIKKFKK--- 250
Query: 209 IAIHA 213
+ H
Sbjct: 251 LCPHF 255
>gi|21283257|ref|NP_646345.1| hypothetical protein MW1528 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486411|ref|YP_043632.1| hypothetical protein SAS1514 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651969|ref|YP_186473.1| hypothetical protein SACOL1633 [Staphylococcus aureus subsp. aureus
COL]
gi|87160469|ref|YP_494231.1| hypothetical protein SAUSA300_1536 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195385|ref|YP_500189.1| hypothetical protein SAOUHSC_01679 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268060|ref|YP_001247003.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394128|ref|YP_001316803.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH1]
gi|151221691|ref|YP_001332513.1| hypothetical protein NWMN_1479 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161509804|ref|YP_001575463.1| hypothetical protein USA300HOU_1577 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253316051|ref|ZP_04839264.1| hypothetical protein SauraC_07882 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732229|ref|ZP_04866394.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733173|ref|ZP_04867338.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257793652|ref|ZP_05642631.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
gi|258411048|ref|ZP_05681328.1| RNA modification protein [Staphylococcus aureus A9763]
gi|258420148|ref|ZP_05683103.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
gi|258437408|ref|ZP_05689392.1| RNA modification protein [Staphylococcus aureus A9299]
gi|258443614|ref|ZP_05691953.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446821|ref|ZP_05694975.1| RNA modification protein [Staphylococcus aureus A6300]
gi|258448735|ref|ZP_05696847.1| RNA modification protein [Staphylococcus aureus A6224]
gi|258450595|ref|ZP_05698657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
gi|258453552|ref|ZP_05701530.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
gi|262049149|ref|ZP_06022026.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
gi|262051236|ref|ZP_06023460.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
gi|269203204|ref|YP_003282473.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893077|ref|ZP_06301311.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
gi|282920125|ref|ZP_06327850.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
gi|282928209|ref|ZP_06335814.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
gi|284024635|ref|ZP_06379033.1| hypothetical protein Saura13_08590 [Staphylococcus aureus subsp.
aureus 132]
gi|294848607|ref|ZP_06789353.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
gi|295406699|ref|ZP_06816504.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
gi|296275802|ref|ZP_06858309.1| hypothetical protein SauraMR_05622 [Staphylococcus aureus subsp.
aureus MR1]
gi|297207705|ref|ZP_06924140.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245719|ref|ZP_06929584.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
gi|300911786|ref|ZP_07129229.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
gi|304380835|ref|ZP_07363495.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|21204697|dbj|BAB95393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244854|emb|CAG43315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286155|gb|AAW38249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
COL]
gi|87126443|gb|ABD20957.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202943|gb|ABD30753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741129|gb|ABQ49427.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus JH9]
gi|149946580|gb|ABR52516.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus JH1]
gi|150374491|dbj|BAF67751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368613|gb|ABX29584.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253724018|gb|EES92747.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728713|gb|EES97442.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787624|gb|EEV25964.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
gi|257840198|gb|EEV64662.1| RNA modification protein [Staphylococcus aureus A9763]
gi|257843859|gb|EEV68253.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
gi|257848613|gb|EEV72601.1| RNA modification protein [Staphylococcus aureus A9299]
gi|257851020|gb|EEV74963.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854396|gb|EEV77345.1| RNA modification protein [Staphylococcus aureus A6300]
gi|257858013|gb|EEV80902.1| RNA modification protein [Staphylococcus aureus A6224]
gi|257861753|gb|EEV84552.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
gi|257864283|gb|EEV87033.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
gi|259160873|gb|EEW45893.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
gi|259162818|gb|EEW47383.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
gi|262075494|gb|ACY11467.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941066|emb|CBI49450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282590016|gb|EFB95098.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
gi|282594473|gb|EFB99458.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
gi|282764395|gb|EFC04521.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
gi|283470855|emb|CAQ50066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
gi|285817258|gb|ADC37745.1| MiaB family protein, possibly involved in tRNA or rRNA modification
[Staphylococcus aureus 04-02981]
gi|294824633|gb|EFG41056.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
gi|294968446|gb|EFG44470.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
gi|296887722|gb|EFH26620.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177370|gb|EFH36622.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
gi|298694858|gb|ADI98080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886032|gb|EFK81234.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
gi|304340562|gb|EFM06496.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312829964|emb|CBX34806.1| RNA modification enzyme, MiaB family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129855|gb|EFT85845.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus CGS03]
gi|315198728|gb|EFU29056.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140539|gb|EFW32393.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144076|gb|EFW35845.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323440474|gb|EGA98186.1| hypothetical protein SAO11_0770 [Staphylococcus aureus O11]
gi|323443248|gb|EGB00866.1| hypothetical protein SAO46_0897 [Staphylococcus aureus O46]
gi|329727386|gb|EGG63842.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21172]
gi|329728416|gb|EGG64853.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21189]
gi|329733119|gb|EGG69456.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
aureus 21193]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|329314252|gb|AEB88665.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
aureus T0131]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|221140004|ref|ZP_03564497.1| hypothetical protein SauraJ_00040 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|302751406|gb|ADL65583.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|49483824|ref|YP_041048.1| hypothetical protein SAR1653 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425701|ref|ZP_05602125.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428362|ref|ZP_05604760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430999|ref|ZP_05607379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433687|ref|ZP_05610045.1| RNA modification protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436601|ref|ZP_05612645.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
gi|282904158|ref|ZP_06312046.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
gi|282905985|ref|ZP_06313840.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282911214|ref|ZP_06319016.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914383|ref|ZP_06322169.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
gi|282919352|ref|ZP_06327087.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C427]
gi|282924677|ref|ZP_06332345.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C101]
gi|293503457|ref|ZP_06667304.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
58-424]
gi|293510474|ref|ZP_06669180.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus M809]
gi|293531014|ref|ZP_06671696.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
gi|295428154|ref|ZP_06820786.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590880|ref|ZP_06949518.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|49241953|emb|CAG40648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271395|gb|EEV03541.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275203|gb|EEV06690.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278429|gb|EEV09065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281780|gb|EEV11917.1| RNA modification protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283952|gb|EEV14075.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
gi|282313512|gb|EFB43907.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C101]
gi|282317162|gb|EFB47536.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus C427]
gi|282321564|gb|EFB51889.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
gi|282324909|gb|EFB55219.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282331277|gb|EFB60791.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595776|gb|EFC00740.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
gi|290920282|gb|EFD97348.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
gi|291095123|gb|EFE25388.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
58-424]
gi|291466838|gb|EFF09358.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus M809]
gi|295128512|gb|EFG58146.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575766|gb|EFH94482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|312437955|gb|ADQ77026.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH60]
gi|315195479|gb|EFU25866.1| hypothetical protein CGSSa00_07410 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|15924566|ref|NP_372100.1| hypothetical protein SAV1576 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927156|ref|NP_374689.1| hypothetical protein SA1405 [Staphylococcus aureus subsp. aureus
N315]
gi|156979894|ref|YP_001442153.1| hypothetical protein SAHV_1563 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006362|ref|ZP_05144963.2| hypothetical protein SauraM_07835 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|13701374|dbj|BAB42668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247347|dbj|BAB57738.1| putative 2-methylthioadenine synthetase [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722029|dbj|BAF78446.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|237737741|ref|ZP_04568222.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817]
gi|229419621|gb|EEO34668.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817]
Length = 432
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 25/145 (17%)
Query: 95 DRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R +K+ C +C +C R +K +L K+ E + E+I
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGRSRSRKKENIL--KEIEKLV-----NEGFKEIILI 198
Query: 151 GGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G + L + L++ +L+ + +K ++ +R S V P +I+ + K
Sbjct: 199 GIN-LGAYGEDLEEDIDFEDLLEKILQVKGLERVRIGS----VYPDKISDRFVDMFK--Y 251
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
K + +H + + + + R
Sbjct: 252 KNLMPHLHIS-LQSCDDTVLKMMKR 275
>gi|323703069|ref|ZP_08114724.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans
DSM 574]
gi|323531963|gb|EGB21847.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans
DSM 574]
Length = 436
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 58/184 (31%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
C C FCF +M + + T+ YI++
Sbjct: 84 FGPTRTCHNRCMFCFVDQMAPNMRPTL-----------YIRDD----------------- 115
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
RL + +V+ + EL + + + P+YI++H +P
Sbjct: 116 DYRLSFWQGNFISLTNVK----------------DEELQRIIHQKMGPLYISVHTTNPEL 159
Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVEL 264
+ + + + +LA GI + +Q+VL G+ND E+ LA L L
Sbjct: 160 RRRMLNNRHAGKIMDQLRQLAAGGIEMHTQAVLCPGVNDGQEMERTITDLAGLWPRVHSL 219
Query: 265 RIKP 268
+ P
Sbjct: 220 AVVP 223
>gi|332652770|ref|ZP_08418515.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16]
gi|332517916|gb|EGJ47519.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16]
Length = 476
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 39/171 (22%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ L+ C C FCF +M + T+ D +A L+++ G+
Sbjct: 97 ETYLMDRARSCANNCIFCFVDQMPPGMRDTLYFKDD-DARLSFL------------MGNY 143
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHA 213
L L++ L + +I+ H V +P+L ++ LK
Sbjct: 144 LTLTN---------LSQREVQRIIDLHISPINVSVHTTDPQLRVEMLKNKR--------- 185
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ E+I + R A A I + Q V G+ND P + L R E+
Sbjct: 186 ------AGESIEVMRRFAAANITMNCQIVSCPGVNDGPALDRTL-RELSEM 229
>gi|254884770|ref|ZP_05257480.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 4_3_47FAA]
gi|294774983|ref|ZP_06740513.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides vulgatus PC510]
gi|319644167|ref|ZP_07998692.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
gi|254837563|gb|EET17872.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 4_3_47FAA]
gi|294451192|gb|EFG19662.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides vulgatus PC510]
gi|317384289|gb|EFV65260.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
Length = 152
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +CR C E GT L+ + E + I + + F+GGDPL + L
Sbjct: 25 GCRHHCRGCQNPESWNPSAGTPLTPEKIEKMICEINANPLLDGITFSGGDPLYHPQEFLA 84
>gi|182626906|ref|ZP_02954640.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
JGS1721]
gi|177907756|gb|EDT70368.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
JGS1721]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD + L I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|168215652|ref|ZP_02641277.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
gi|182382416|gb|EDT79895.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD + L I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|110803412|ref|YP_699306.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
gi|110683913|gb|ABG87283.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD + L I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|110801313|ref|YP_696705.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
13124]
gi|110675960|gb|ABG84947.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
13124]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD + L I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|18311007|ref|NP_562941.1| MiaB-like tRNA modifying protein [Clostridium perfringens str. 13]
gi|168208727|ref|ZP_02634352.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
ATCC 3626]
gi|168212938|ref|ZP_02638563.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
F4969]
gi|18145689|dbj|BAB81731.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|170713061|gb|EDT25243.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
ATCC 3626]
gi|170715635|gb|EDT27817.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
F4969]
Length = 434
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD + L I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|309811257|ref|ZP_07705048.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
Ellin185]
gi|308434797|gb|EFP58638.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
Ellin185]
Length = 362
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 40/207 (19%)
Query: 63 QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-S 120
+ EL+ +D P+ D+ G VHR + + L C + C +C E V +
Sbjct: 19 LRGELSTAAGVSDDGPLVDS-----FGRVHR---DLRISLTDKCNLRCTYCMPAEGVPLA 70
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ T+L+S + +A I ++ I E+ TGG+PL+ + +++ L ++
Sbjct: 71 PRDTLLASDEI-VTVARIAVEAGIDEIRLTGGEPLLRPD--IVDLVERLAALE------- 120
Query: 181 HSRVPIVDPQR-INPELIQC------LKEAGK-PVYIAIHANHPYEFSEEAIA------- 225
P P+ + ++ L++AG + +++ P F+
Sbjct: 121 ---GPGGRPELSMTTNAVRLAQLAKPLRDAGLARLNVSLDTLSPSRFATMTRRDRLDDVM 177
Query: 226 -AISRLANAG-IILLSQSVLLKGINDD 250
+ AG + +VLL+G+NDD
Sbjct: 178 TGLDAARCAGFAPIKINTVLLRGVNDD 204
>gi|282916846|ref|ZP_06324604.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus D139]
gi|283770652|ref|ZP_06343544.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
gi|282319333|gb|EFB49685.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
aureus D139]
gi|283460799|gb|EFC07889.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|239635993|ref|ZP_04677010.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
L37603]
gi|239598458|gb|EEQ80938.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
L37603]
Length = 341
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G L ++ E ++ + + + ++ TGG+
Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L ++++ L I ++ + + LK+ G+ +Y
Sbjct: 78 PLL--RRNLYQLIEQLNQIDGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I I + +E AI+ +L Q V+ KG+NDD
Sbjct: 123 RINISLDA---IDDEVFQAINNRNIKASTILEQIDYAISIGFKIKVNVVIQKGVNDD 176
>gi|170755099|ref|YP_001781504.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
B1 str. Okra]
gi|226704813|sp|B1IN35|MOAA_CLOBK RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|169120311|gb|ACA44147.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
B1 str. Okra]
Length = 319
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ K++ I ++ + + + ++++ LK+ G + I +
Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKDGLK-RVNISLDSLK 123
Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + +I + + G+ + +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167
>gi|110597800|ref|ZP_01386083.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
gi|110340525|gb|EAT59008.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
Length = 448
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 21/127 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C C +C R +++ A+ Y E++
Sbjct: 146 RTRAFLKIQDGCDSGCSYCTIPLIRGRSRSLPPDEIVARAMILASSGY-------REIVL 198
Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG GD L L ++L+ L + V +R S ++P ++ E I+ + + K
Sbjct: 199 TGVNIGDYLENGIG-LPELLRRLEKVP-VSRIRISS----IEPDVVDSEFIELVANS-KT 251
Query: 207 VYIAIHA 213
+ +H
Sbjct: 252 IVPHLHI 258
>gi|242309031|ref|ZP_04808186.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
gi|239524455|gb|EEQ64321.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
Length = 424
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G K + + + + E I TG +
Sbjct: 134 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFPKEKIINQIKKLTQN-GFSEFILTGTN 190
Query: 154 PLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206
+ S + + K+L+++ I V+ LR S ++P +I + + L + K
Sbjct: 191 --MGSWGKDLGENITKLLESICAIPQVKRLRLGS----LEPSQITQDFLDFLDNPKIEKH 244
Query: 207 VYIAIHANHP 216
++IA+ P
Sbjct: 245 LHIALQHTSP 254
>gi|253583199|ref|ZP_04860397.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725]
gi|251833771|gb|EES62334.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725]
Length = 432
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R +K+ C +C +C K ++ + + E E+I G +
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIP--FARGKSRSRKKENIIKEIEKLVE-EGFKEIILIGIN- 201
Query: 155 LILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L + L + +LK++ I +Q +R S V P +I+ E I K +
Sbjct: 202 LGAYGEDLDEGENFESLLKSILEINKLQRVRIGS----VYPDKISDEFINMFD--NKKLM 255
Query: 209 IAIHANHPYEFSEEAIAAISR 229
+H + +E + + R
Sbjct: 256 PHLHIS-LQSCDDEVLKRMRR 275
>gi|27468759|ref|NP_765396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis ATCC 12228]
gi|57867756|ref|YP_189412.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis RP62A]
gi|251812031|ref|ZP_04826504.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875324|ref|ZP_06284197.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis SK135]
gi|293368414|ref|ZP_06615039.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W2(grey)]
gi|38258081|sp|Q8CNE6|MOAA_STAES RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81673523|sp|Q5HLY1|MOAA_STAEQ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|27316307|gb|AAO05482.1|AE016750_87 molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis ATCC 12228]
gi|57638414|gb|AAW55202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis RP62A]
gi|251804479|gb|EES57136.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
epidermidis BCM-HMP0060]
gi|281296089|gb|EFA88610.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis SK135]
gi|291317489|gb|EFE57910.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329737046|gb|EGG73301.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU045]
Length = 340
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L K+++ L I ++ + + LK+ GK +Y
Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121
Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
I + N E + I A + L + G + V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175
>gi|302870435|ref|YP_003839072.1| radical SAM domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302573294|gb|ADL49496.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 768
Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
+LK+ C + C C+ E + ++ + A I E + + VI
Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+L +RL +VL LR I V LR + V ++ +L L E V
Sbjct: 74 HGGEPLLLGAERLDEVLADLRRVIAPVTRLRLGMQTNGVL---LSEQLCDLLAEHDVAVG 130
Query: 209 IAI 211
+++
Sbjct: 131 VSL 133
>gi|146277288|ref|YP_001167447.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides ATCC 17025]
gi|145555529|gb|ABP70142.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
sphaeroides ATCC 17025]
Length = 491
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 75/241 (31%), Gaps = 57/241 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA E Q
Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117
Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
+ + G GD L +L ++++ I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDLVQTQLPDIKLCLSSNGLAVPDHVEEIVA--MNIDH 175
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
V L ++ P V +I P + + + A+ L G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGRRHEGVEGAAILLARQM-----EALEMLVAHG 226
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
+++ SVL+ GIN + L R I P D A GT HF LT +
Sbjct: 227 VLVKVNSVLIPGIN--EAGMVELNRIVKAKGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280
Query: 290 G 290
G
Sbjct: 281 G 281
>gi|257784457|ref|YP_003179674.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
20469]
gi|257472964|gb|ACV51083.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
20469]
Length = 260
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 27/195 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L+ CP+ C +C + GT S K+ A + + + TGG+
Sbjct: 25 PGTRLVVFTQGCPMRCAYCHNPDTWQFGIGTETSVKEILATFNRNRAFYRNGGITATGGE 84
Query: 154 PLILSHKRLQKVLKTLRYIKHVQ-ILRFHS----RVPIVDPQRINPELIQCLKEAGKPVY 208
PL + + L H R H+ +P+ PE + + + V
Sbjct: 85 PLAQP-----EFVGALFEAAHNDPRGRIHTCLDSSGIAYNPE--TPEKFERILDNTDLVL 137
Query: 209 IAI-------HANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILA----- 255
+ I H N E E A L GI +L + V++ GI D E LA
Sbjct: 138 LDIKHSDPKGHIN-LCEVGSERPLAFGDELNRRGIKVLIRHVVVPGITDSAEELAGVGRI 196
Query: 256 -NLMRTFVELRIKPY 269
+ L + PY
Sbjct: 197 IAHWDNVIGLDVLPY 211
>gi|194336426|ref|YP_002018220.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
phaeoclathratiforme BU-1]
gi|194308903|gb|ACF43603.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
phaeoclathratiforme BU-1]
Length = 326
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 66/270 (24%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR+ D + + + C + C +C R E G + ++L + +A + E +V F
Sbjct: 9 HRHVDYVRIAVTSRCNLRCSYCMREEHEGRADTVSLLDKNEINTIIAVLAE-LGFSKVRF 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCL 200
TGG+PL+ + + +++ + ++ + + + P I+ L I L
Sbjct: 68 TGGEPLL--REGIAGLVREAKQHPSIKTVGLTTNGVLLDRFLPSLIDAGLDTINFSIDTL 125
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ G+ I + + + + L A I + V+++ IN D
Sbjct: 126 -DRGRYYAI-----TRRDVYRQVRNNLDNLLKTALIAVKLNVVMMRDINSDE-------- 171
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIE-------------------EGQKIVASLKEK 300
T + +T+ KI L+
Sbjct: 172 -------------ICRFVDFTKDYDVTVRFIELQPFDDNQIWRTGRFFGADKIRELLQHH 218
Query: 301 ISGL------CQPFYILDLPGGYGKVKIDT 324
GL ++ LPG G + I
Sbjct: 219 YPGLQAIRGSATQYFSYSLPGHKGSIAIIP 248
>gi|291276741|ref|YP_003516513.1| MiaB-like tRNA modifying enzyme [Helicobacter mustelae 12198]
gi|290963935|emb|CBG39772.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter mustelae
12198]
Length = 413
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 24/158 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +K+ C C +C V + ++ E I + EV+ TG +
Sbjct: 134 RAFIKIQEGCDFACSYCII-PSVRGISRSYPQARVLEQIG--ILADHGVSEVVLTGTNVG 190
Query: 156 ILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKPVY 208
+ K++ + IK + +R S ++P +I+ E ++ L+ E +
Sbjct: 191 SYGKDFGSNIAKLIHEISKIKGILRIRIGS----LEPSQIDEEFLELLEGDFLERHLHIA 246
Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILL 238
+ H N + + A + ++A+ G +
Sbjct: 247 LQ-HSSDRMLEIMNRHNRVASD-RALLEKIADRGFAIG 282
>gi|289428026|ref|ZP_06429730.1| radical SAM domain protein [Propionibacterium acnes J165]
gi|295131607|ref|YP_003582270.1| radical SAM domain protein [Propionibacterium acnes SK137]
gi|289158909|gb|EFD07109.1| radical SAM domain protein [Propionibacterium acnes J165]
gi|291376027|gb|ADD99881.1| radical SAM domain protein [Propionibacterium acnes SK137]
gi|332676474|gb|AEE73290.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Propionibacterium acnes 266]
Length = 426
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)
Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P ++ ++ C + C+ C + Q + + +Y + + I
Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101
Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD L +++ + HV I P V P + ++ ++EAG +
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152
Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
H +H + A L G+ +V K I++
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
P++L N ++L +Y
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229
>gi|257467710|ref|ZP_05631806.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
gi|317062003|ref|ZP_07926488.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
gi|313687679|gb|EFS24514.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
Length = 432
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 21/143 (14%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +C +C G + + K+ E + EVI G
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGKSRSRKKYNIIKEIEKLVE-----EGFKEVILIGI 200
Query: 153 DPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ L + L + +LK++ I ++ +R S V P +I+ E + K K
Sbjct: 201 N-LGAYGEDLDEGENFESLLKSILEINKLERVRIGS----VYPDKISDEFMDMFK--NKK 253
Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
+ +H + ++ + + R
Sbjct: 254 LMPHLHIS-LQSCDDDVLKRMRR 275
>gi|326204018|ref|ZP_08193879.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
gi|325985785|gb|EGD46620.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
Length = 471
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAAL-----AYIQEKSQIWEVIFT 150
+ +H C + C++CF S + + L Y ++ + +
Sbjct: 84 VSFPPVHRCNLNCQYCFAGGGNNYSGDRPEFDRERIDRLLHFVYEDYFKDYKKFRFDFVS 143
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKE 202
GG+PL L+ + ++ +++ +R I R S+ + + I E+I L
Sbjct: 144 GGEPL-LNFEAIRYLVERVREIDG----RKQSKSSFFLVTNGTLITDEIIDYLDR 193
>gi|315230631|ref|YP_004071067.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP]
gi|315183659|gb|ADT83844.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP]
Length = 424
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KS 142
G++ R + I ++ C + C FC E S+ + D + + + E
Sbjct: 112 GLIDRGTNLIQVRGSSGCNLSCIFCSVDEGPYSRTRRIDYVVDIDYLMKWFDEVARFKGK 171
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + G+PL+ + ++++ L+ +V ++ S + +N +L++ L E
Sbjct: 172 GLEAHLDGQGEPLLYP--FIVELVQALKEHPNVDVVSMQSNGVL-----LNDKLVEELAE 224
Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
AG + +++H NH E +E L NAGI +L V++
Sbjct: 225 AGLDRINLSVHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLLAPVII 277
Query: 245 KGINDD 250
G+ND+
Sbjct: 278 FGVNDN 283
>gi|289425944|ref|ZP_06427691.1| radical SAM domain protein [Propionibacterium acnes SK187]
gi|289153487|gb|EFD02201.1| radical SAM domain protein [Propionibacterium acnes SK187]
Length = 426
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)
Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P ++ ++ C + C+ C + Q + + +Y + + I
Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101
Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD L +++ + HV I P V P + ++ ++EAG +
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152
Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
H +H + A L G+ +V K I++
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
P++L N ++L +Y
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229
>gi|222151475|ref|YP_002560631.1| hypothetical protein MCCL_1228 [Macrococcus caseolyticus JCSC5402]
gi|222120600|dbj|BAH17935.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 448
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVVRQATQLVQS--GYQEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I + ++ K
Sbjct: 199 TGGYGED---LKDYNLAQLLRDLETIDGLKRIRISS----IEASQLTDEVIDVIDKSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|168204736|ref|ZP_02630741.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
JGS1987]
gi|170663578|gb|EDT16261.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
JGS1987]
Length = 434
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|169343507|ref|ZP_02864506.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
JGS1495]
gi|169298067|gb|EDS80157.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
JGS1495]
Length = 434
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SKD + L I+ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195
Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L +L+ + I ++ +R S +DP ++++ + K
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|257094413|ref|YP_003168054.1| Radical SAM domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046937|gb|ACV36125.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 299
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
D ++L + C C FC EM + + + + ++E L I+ S+I V
Sbjct: 21 DSLILPVTDGCSWNQCTFC---EMYTAPQKSFRARAESE-VLESIRHTGERIGSEIRRVF 76
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DP---QRINPELIQCLKEAG 204
GD L+L +RL +L +R H+ +R RV P +R + + ++ L AG
Sbjct: 77 LADGDALVLPTRRLLAILDAIRT--HLPAVR---RVASYCLPRNLRRKSVDELRELAAAG 131
Query: 205 KPVYIAIHAN---------HPYEFSEEAIAAISRLANAGI 235
+ + H E + A+ +L AGI
Sbjct: 132 LSIAYVGAESGDDEVLERVHKGESYASTVDALDKLGQAGI 171
>gi|282854858|ref|ZP_06264192.1| radical SAM domain protein [Propionibacterium acnes J139]
gi|282582004|gb|EFB87387.1| radical SAM domain protein [Propionibacterium acnes J139]
Length = 426
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)
Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P ++ ++ C + C+ C + Q + + +Y + + I
Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101
Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD L +++ + HV I P V P + ++ ++EAG +
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152
Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
H +H + A L G+ +V K I++
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
P++L N ++L +Y
Sbjct: 206 PQMLKNA----IDLGAIMFYTFMLVPTG 229
>gi|310643065|ref|YP_003947823.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa
SC2]
gi|309248015|gb|ADO57582.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa
SC2]
Length = 447
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 21/151 (13%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ H R LK+ C +C FC G + +S A + +
Sbjct: 137 VPDFAH--HTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDAASI-ITQARQLV--HAGYK 191
Query: 146 EVIFTG------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E++ TG GD + + L +L L ++ ++ +R S ++ +I+ +++
Sbjct: 192 EIVLTGIHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDV 245
Query: 200 LKEAGKPVYIAIHANHPYEF-SEEAIAAISR 229
LK + K + H + P + + + + R
Sbjct: 246 LKRSNK---LVRHFHIPLQAGDDTVLKRMRR 273
>gi|301055055|ref|YP_003793266.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|300377224|gb|ADK06128.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 338
Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|229047248|ref|ZP_04192848.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|228724115|gb|EEL75460.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 340
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101
>gi|196034109|ref|ZP_03101519.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|195993183|gb|EDX57141.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|52141964|ref|YP_084863.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51975433|gb|AAU16983.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|228966456|ref|ZP_04127509.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228793178|gb|EEM40728.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 340
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLHKIDGVEDI 101
>gi|229179852|ref|ZP_04307198.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
172560W]
gi|228603533|gb|EEK61008.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
172560W]
Length = 340
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101
>gi|224476684|ref|YP_002634290.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421291|emb|CAL28105.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 448
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I + + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVINVISNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHV 257
>gi|172065715|ref|YP_001816427.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
gi|171997957|gb|ACB68874.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
Length = 371
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 61/248 (24%)
Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
PL + P R L L ++ C C +C R+ G + SS+ A L I
Sbjct: 30 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 87
Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
+ ++ TGG+PL+ + L+ +++ L + V + LR
Sbjct: 88 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARTLR 145
Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
SRV + I+ + + + + PV + A I AG
Sbjct: 146 DAGLSRVTVSL-DAIDDTVFRRMSDVEVPVARVL-------------AGIEAAQAAGLAP 191
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
+ +V+ +G NDD + L+R F + Y G S + +
Sbjct: 192 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 244
Query: 289 EGQKIVAS 296
++++ +
Sbjct: 245 RMRELIEA 252
>gi|30021670|ref|NP_833301.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228959754|ref|ZP_04121429.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229110990|ref|ZP_04240550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
gi|229128840|ref|ZP_04257816.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|229146135|ref|ZP_04274511.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|29897225|gb|AAP10502.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228637346|gb|EEK93800.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228654545|gb|EEL10407.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|228672474|gb|EEL27758.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-15]
gi|228799884|gb|EEM46826.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 340
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101
>gi|228916198|ref|ZP_04079768.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843396|gb|EEM88474.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|212690793|ref|ZP_03298921.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
gi|237708179|ref|ZP_04538660.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 9_1_42FAA]
gi|237723710|ref|ZP_04554191.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D4]
gi|265756834|ref|ZP_06090822.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_33FAA]
gi|212666670|gb|EEB27242.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
gi|229437921|gb|EEO47998.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides dorei 5_1_36/D4]
gi|229457732|gb|EEO63453.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 9_1_42FAA]
gi|263233620|gb|EEZ19240.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_33FAA]
Length = 152
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +CR C E GT L+ + E + I + + F+GGDPL + L
Sbjct: 25 GCRHHCRGCQNPESWNPSAGTPLTPEKIEKIICEINANPLLDGITFSGGDPLYHPQEFLA 84
>gi|167947614|ref|ZP_02534688.1| hypothetical protein Epers_14152 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 59
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+I +GGDPL+L +RL L L I H++ LR HSR+P+V P+RI+ L L +
Sbjct: 1 MILSGGDPLLLDERRLAGWLDDLAAIPHLRRLRLHSRLPVVLPERISESLAHLLTASRL 59
>gi|118478814|ref|YP_895965.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|196044540|ref|ZP_03111775.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225865551|ref|YP_002750929.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|118418039|gb|ABK86458.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|196024575|gb|EDX63247.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225786709|gb|ACO26926.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|47568929|ref|ZP_00239621.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
gi|47554413|gb|EAL12772.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|196038233|ref|ZP_03105542.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|196030641|gb|EDX69239.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|296504074|ref|YP_003665774.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|296325126|gb|ADH08054.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99
>gi|218904693|ref|YP_002452527.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|228928618|ref|ZP_04091654.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|218538124|gb|ACK90522.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|228830937|gb|EEM76538.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|325856357|ref|ZP_08172073.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
gi|325483541|gb|EGC86513.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
Length = 477
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 184 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 238
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + +R ++K L ++ ++ R S ++P I+ ELI ++
Sbjct: 239 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 291
Query: 209 IAIHA 213
H
Sbjct: 292 FMPHF 296
>gi|288555683|ref|YP_003427618.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
gi|288546843|gb|ADC50726.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
Length = 449
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + A ++ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKDVIKQATQLVEA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ + + K
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVDGLKRIRISS----IEASQLTDEVIEVIDRSEK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|49478276|ref|YP_037649.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49329832|gb|AAT60478.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 338
Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|229031224|ref|ZP_04187231.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
gi|228730091|gb|EEL81064.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|168179650|ref|ZP_02614314.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
NCTC 2916]
gi|168184928|ref|ZP_02619592.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Bf]
gi|237795372|ref|YP_002862924.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Ba4 str. 657]
gi|259495862|sp|C3KXJ8|MOAA_CLOB6 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|182669280|gb|EDT81256.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
NCTC 2916]
gi|182672020|gb|EDT83981.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Bf]
gi|229263442|gb|ACQ54475.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
Ba4 str. 657]
Length = 319
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E ++ + ++ ++ + + ++ FTGG+PLIL
Sbjct: 14 VSVTDRCNLRCVYCMPPEGIIKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ + K++ I ++ + + + ++++ LK+AG + I +
Sbjct: 73 KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123
Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + +I + + G+ + +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167
>gi|206969370|ref|ZP_03230325.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
gi|206736411|gb|EDZ53569.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99
>gi|146351232|ref|YP_001210459.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
nitroguajacolicus]
gi|146218796|emb|CAL09868.1| putative MoaA-like protein [Arthrobacter nitroguajacolicus]
Length = 376
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+V RY R L L C + C +C E M K V+S+++ + +
Sbjct: 33 GLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEGMEWLSKQAVMSAEEIQRIVRVGVHFLG 92
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
+ E+ TGG+PL+ + L ++ +LR H +PI + +
Sbjct: 93 VRELRLTGGEPLVRAD--LLDIISSLRQA--------HPELPIS----MTTNGIGLDKKA 138
Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
LK AG + +++ + H F++ AG+ + +VL++GI
Sbjct: 139 AGLKAAGLSRINVSLDSLHEETFAQLTRRPFLAKVLAGVDAAWAAGLGPVKINAVLMRGI 198
Query: 248 ND--DPEILA 255
ND P +LA
Sbjct: 199 NDVESPALLA 208
>gi|75762416|ref|ZP_00742285.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228902038|ref|ZP_04066203.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
gi|74490091|gb|EAO53438.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228857624|gb|EEN02119.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
IBL 4222]
Length = 340
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLHKIDGVEDI 101
>gi|228985250|ref|ZP_04145415.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774545|gb|EEM22946.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 337
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K+++ L I+ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIERLAKIEGIKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + + AG+ + V+ KG+ND
Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175
>gi|218234531|ref|YP_002368381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
gi|218162488|gb|ACK62480.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99
>gi|56478522|ref|YP_160111.1| molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
EbN1]
gi|56314565|emb|CAI09210.1| Molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
EbN1]
Length = 359
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 30/185 (16%)
Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAAL 135
P G + DR + + + C C +C R + G+ + +LS ++
Sbjct: 23 PTDGPLKDRRDRAVQDLRISVTDRCNFRCIYCMPRSVFGADYPFLPRKELLSFEEITRIA 82
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
+ ++ TGG+PL+ K ++ +++ L I V+ L + + P+
Sbjct: 83 RRF-ATRGVRKIRITGGEPLL--RKHVENLIEMLAQIPDVE-LTLTTNGV------LLPK 132
Query: 196 LIQCLKEAGK-PVYIAIHA---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244
+ + LK+AG V I++ A N + I+ +AG+ + V+
Sbjct: 133 MARTLKDAGLDRVTISLDAIDDPTFRLMNDADFPVAAVLEGIAAAKDAGLGPIKVNMVVK 192
Query: 245 KGIND 249
+G+ND
Sbjct: 193 RGVND 197
>gi|291087896|ref|ZP_06347812.2| radical SAM domain protein [Clostridium sp. M62/1]
gi|291073644|gb|EFE11008.1| radical SAM domain protein [Clostridium sp. M62/1]
Length = 322
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 27/183 (14%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSS 128
E E+ + +N +GIV+R P ++++ C C FC M ++ V S
Sbjct: 22 ELENRLKENRKMKYEGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSM 78
Query: 129 KDTEAALAYIQEKSQ----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHS 182
+ L + + +V GD L+L ++L +L +R + + V++ + +
Sbjct: 79 DEIMEDLR--EAHDGYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGT 136
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANA 233
I+ R + E ++ LKEAG + + E + E A +L
Sbjct: 137 AQDIL---RKSEEELRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRC 193
Query: 234 GII 236
GI
Sbjct: 194 GIQ 196
>gi|257095940|ref|YP_003169581.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257048464|gb|ACV37652.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 505
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 66/222 (29%), Gaps = 61/222 (27%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------M 117
+ + P ED H Y R+ + + C + C +C R+
Sbjct: 36 RARVQDHPCYSED-------------AHHYFARMHVAVAPACNIQCHYCNRKYDCANESR 82
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR--------------- 161
G + + LA Q+ + G GDPL +
Sbjct: 83 PGVVSEVLTPDQAVRKTLAVAATIPQMSVLGIAGPGDPLANPERTFETFRQLALKAPDIK 142
Query: 162 ---------LQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPV 207
L ++ L I HV + + VDP RI P + +
Sbjct: 143 LCVATNGLVLPDYVEELARYNIDHV-TITIN----CVDPAIGARIYPWIFWKNRRVFGHE 197
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
AI + + L GI++ SVL+ G+ND
Sbjct: 198 AAAI-------LIAQQQKGLEMLTARGILVKVNSVLIPGVND 232
>gi|225018723|ref|ZP_03707915.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum
DSM 5476]
gi|224948451|gb|EEG29660.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum
DSM 5476]
Length = 436
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 40/163 (24%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF ++ + ++ D + + F G+ + L
Sbjct: 79 LMDKQRSCKNKCIFCFIDQLPKGMRKSLYFKDDDDR-------------LSFLFGNYITL 125
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PEL-IQCLKEAGKPVYIAIHANH 215
++ + + I + LR P+ PEL ++ +K
Sbjct: 126 TN-----ITEE--EIDRIIKLRI---SPVNISVHTTNPELRVRMMKNPR----------- 164
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ +++ I +LA+AGI L Q VL GIND E+ +L
Sbjct: 165 ----AGDSLRFIKKLADAGIALNCQLVLCPGINDGAELERSLR 203
>gi|218898660|ref|YP_002447071.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
gi|218544787|gb|ACK97181.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 77 PLL--RRGLPKLIERLHKIDGVEDI 99
>gi|229174229|ref|ZP_04301763.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
gi|228609247|gb|EEK66535.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|226223665|ref|YP_002757772.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
Clip81459]
gi|254823680|ref|ZP_05228681.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-194]
gi|254853066|ref|ZP_05242414.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-503]
gi|254992565|ref|ZP_05274755.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J2-064]
gi|255521212|ref|ZP_05388449.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-175]
gi|259495866|sp|C1L1W8|MOAA_LISMC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|225876127|emb|CAS04833.1| Putative molybdenum cofactor biosynthesis protein A [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258606413|gb|EEW19021.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL R2-503]
gi|293592902|gb|EFG00663.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
FSL J1-194]
Length = 333
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LK+AG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|317051390|ref|YP_004112506.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum
S5]
gi|316946474|gb|ADU65950.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum
S5]
Length = 440
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 30/193 (15%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDN------NHSPLKGIVHRYPDRIL--------LKLL 102
RQ +P+ + E + IGD N +P + +R+L LK+
Sbjct: 90 LRQELPEVDIFIDTKESSMESIGDQLSRRLVNFTPQDHLEALPGERLLTTPSYMAYLKIA 149
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
C C +C + G + +V K A S + E++ D L L
Sbjct: 150 EGCSNTCTYCVIPRIRGPYQ-SVPQEKLVSEARE--LAASGVRELVLISQDSTEYGLDLY 206
Query: 159 HKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP 216
KR L +L L I+++ +R V P + ELI+ + K Y+ I H
Sbjct: 207 GKRSLAPLLAELAKIENLHWIR----VLYTYPNHFDDELIETIAREPKICKYVDIPFQH- 261
Query: 217 YEFSEEAIAAISR 229
S + ++R
Sbjct: 262 --MSNSVLKRMNR 272
>gi|78189217|ref|YP_379555.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
chlorochromatii CaD3]
gi|78171416|gb|ABB28512.1| Nitrogenase cofactor biosynthesis protein NifB [Chlorobium
chlorochromatii CaD3]
Length = 423
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 55/217 (25%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
RI L + C + C +C R+ ++ ++SK + AL Y+ + I V
Sbjct: 20 GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPQQALYYLDQAMELSPNIAVVG 79
Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181
G GDP + ++ + L + HV + +
Sbjct: 80 IAGPGDPFANPDETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELARLQVSHV-TITIN 138
Query: 182 SRVPIVDPQRINPELIQCLK-----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+DP+ I E+ ++ GK + N+ E A+ RL G+
Sbjct: 139 ----AIDPE-IGQEIYAWVRYNKKMYRGKDAAKVL-INNQLE-------ALKRLKEVGVT 185
Query: 237 LLSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270
S+++ GIND +A+ + L PYY
Sbjct: 186 AKVNSIIIPGINDAHVITVASKVAELGADILNCLPYY 222
>gi|206975468|ref|ZP_03236381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|222097023|ref|YP_002531080.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
gi|206746370|gb|EDZ57764.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|221241081|gb|ACM13791.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
Length = 338
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|315506786|ref|YP_004085673.1| radical sam domain protein [Micromonospora sp. L5]
gi|315413405|gb|ADU11522.1| Radical SAM domain protein [Micromonospora sp. L5]
Length = 768
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
+LK+ C + C C+ E + ++ + A I E + + VI
Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+L +RL +VL LR I V LR + V ++ L L E V
Sbjct: 74 HGGEPLLLGAERLGEVLADLRRVIDPVTRLRLGMQTNGVL---LSERLCDLLAEHDVAVG 130
Query: 209 IAI 211
+++
Sbjct: 131 VSL 133
>gi|167037275|ref|YP_001664853.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040032|ref|YP_001663017.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X514]
gi|300914120|ref|ZP_07131436.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X561]
gi|307724644|ref|YP_003904395.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X513]
gi|320115692|ref|YP_004185851.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854272|gb|ABY92681.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X514]
gi|166856109|gb|ABY94517.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889055|gb|EFK84201.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X561]
gi|307581705|gb|ADN55104.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
X513]
gi|319928783|gb|ADV79468.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 317
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
K ++ ++ IK ++ + +++ E+ LKEAG K V I++ +
Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121
Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + ++ AI + + G+ + +V++KGINDD
Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167
>gi|257064532|ref|YP_003144204.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM
20476]
gi|256792185|gb|ACV22855.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM
20476]
Length = 384
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 32/182 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKSQIWE----VIFTGG 152
LL C C+ C+ G + +S + + L+ I++ + + + +GG
Sbjct: 10 WHLLDDCDQRCKHCYI--FSGDENEELNRMSFEQMQQTLSNIEDFCETFGREPYLYISGG 67
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
DP++ L L + +RF + +P + E+ + L ++G Y
Sbjct: 68 DPILHPD---FWNLMDLLK---SKGIRF---TIMGNPFHLTDEVCERLHDSGCVRYQMSI 118
Query: 211 -----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262
H P + E +A I LA GI S+++ ++D + L ++ V
Sbjct: 119 DGNRQTHDWFRKPGSYD-ETLARIPMLARHGIR----SIIMTTVSDVNAAELPEIIDAVV 173
Query: 263 EL 264
E
Sbjct: 174 EA 175
>gi|313668419|ref|YP_004048703.1| hypothetical protein NLA_11150 [Neisseria lactamica ST-640]
gi|313005881|emb|CBN87337.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 369
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147
D +LLK+ C + C +C+ + +LS K + + + +
Sbjct: 3 DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
+ GG+P +L RL+ +LK LR + + +
Sbjct: 63 VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98
>gi|261400665|ref|ZP_05986790.1| putative radical SAM [Neisseria lactamica ATCC 23970]
gi|269209574|gb|EEZ76029.1| putative radical SAM [Neisseria lactamica ATCC 23970]
Length = 369
Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147
D +LLK+ C + C +C+ + +LS K + + + +
Sbjct: 3 DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62
Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
+ GG+P +L RL+ +LK LR + + +
Sbjct: 63 VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98
>gi|217960969|ref|YP_002339537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|217063865|gb|ACJ78115.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 338
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99
>gi|302874325|ref|YP_003842958.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
743B]
gi|307689408|ref|ZP_07631854.1| RNA modification enzyme, MiaB family protein [Clostridium
cellulovorans 743B]
gi|302577182|gb|ADL51194.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
743B]
Length = 433
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 23/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ E + + + E+I +G
Sbjct: 141 KTRAFLKVQDGCNRFCSYCLI-----PYARGAVCSKNPETIIDEVNKLADNGFKEIILSG 195
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + K L +++ + I ++ +R S V+P+ E+I+ +
Sbjct: 196 IHIASYGVD--LEERKTLMDIIEEIHKINGIKRIRIGS----VEPRFFTDEVIEKMASME 249
Query: 205 KPVYIAIHA 213
K + H
Sbjct: 250 K---MCPHF 255
>gi|167630503|ref|YP_001681002.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
gi|167593243|gb|ABZ84991.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
Length = 446
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 14/151 (9%)
Query: 57 ARQFIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
R I E + E + + D L R R +K+ C +YC +C
Sbjct: 105 RRSAIVDLVEEHRRSGETVNTVYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYC 164
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSH--KRLQKVLKTL 169
G + + E A E++ +G S L K++ L
Sbjct: 165 IIPYARGPVRSRRI-ESVVEEATR--LTGEGFKEIVLSGIHLGAYGSDFNADLAKLIVEL 221
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
I ++ +R S V+PQ PEL++ +
Sbjct: 222 CRIPGLRRIRVGS----VEPQEFTPELLEAV 248
>gi|149193779|ref|ZP_01870877.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
gi|149135732|gb|EDM24210.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
Length = 405
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
KEE++ + + +GD + K + + +K+ C C +C ++ G
Sbjct: 96 KEEIDKFLDFKGINLGDFDFVNKKIVESFDKTKAFIKIQEGCDFECAYCIIPKVRG---- 151
Query: 124 TVLSSKDTEA--ALAYIQ--EKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQ 176
SS+ E L I+ + I E + TG + ++ L K+++ + I+ V+
Sbjct: 152 ---SSRSIEESLILEEIKKLRDNGISEFVLTGINMGSYGKDTNTSLSKLIEKISNIRGVK 208
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+R S ++P +I+ LI+ + ++ I H
Sbjct: 209 RIRLGS----LEPSQIDDRLIELTQNGILEKHLHIALQH 243
>gi|220929654|ref|YP_002506563.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
H10]
gi|219999982|gb|ACL76583.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
H10]
Length = 454
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 14/128 (10%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
++ R LK+ C +C +C G + D + ++ E + E++
Sbjct: 159 TYKERTRAYLKIQEGCSQFCSYCIIPYARGPIRSR--KPDDIIEEVKHLAESGFL-EIVL 215
Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
TG + L ++K I ++ +R S ++P I E + + K
Sbjct: 216 TGIHLASFGREIKDTNLLDIIKKTHSIDGIKRIRLGS----LEPTTITEEFVDAVGRLPK 271
Query: 206 PVYIAIHA 213
+ H
Sbjct: 272 ---LCPHF 276
>gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
SIP3-4]
Length = 336
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R D I L + C C +C +M + VLS ++ + I + + +V TG
Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
G+PL+ + + + + + ++ ++ L V + ++ + L++AG K + I+
Sbjct: 76 GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQ-AAALRQAGVKRINIS 127
Query: 211 IHANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258
+ + + F + I +AG + SV+++G+NDD E L L
Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDD-EALDLLR 183
>gi|319790216|ref|YP_004151849.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
gi|317114718|gb|ADU97208.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
Length = 376
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 36/201 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C R + S++D + L I + S+ V+ TGG+
Sbjct: 9 PKWVAWEITRRCNLQCIHC-RSASTMESEQGDFSTEDGKKLLDDIAKLSKPT-VVLTGGE 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-----PIVDPQRINPELIQCLKEAG-KPV 207
PL L++ + L + +++ + ++ E+ + +KE G + V
Sbjct: 67 PL------LREDIWELAE--------YGTKLGFRMCIATNGTLVDDEVCRKMKEVGIRMV 112
Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+++ + P E ++ A GI L S K + + N+
Sbjct: 113 SLSLDGSTP-EIHDDFRKQPGAYEGVIKAAELFNKHGIPFLINSSFTK---RNAHDIPNV 168
Query: 258 MRTFVELRIKPYYLHHPDLAA 278
+ EL K +Y+
Sbjct: 169 YKKARELGAKAWYMFLVLPVG 189
>gi|327314071|ref|YP_004329508.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
gi|326945694|gb|AEA21579.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
Length = 450
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 157 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 211
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + +R ++K L ++ ++ R S ++P I+ ELI ++
Sbjct: 212 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 264
Query: 209 IAIHA 213
H
Sbjct: 265 FMPHF 269
>gi|110637727|ref|YP_677934.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
gi|110280408|gb|ABG58594.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
Length = 317
Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 23/210 (10%)
Query: 99 LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L VC + C +C + VL+ ++ + + I + + + TGG+PL+
Sbjct: 20 VSLTAVCNMACVYCVTPGAIHTPSAEKVLTVEEYLSIIKNIHSQVGLKTIRLTGGEPLLF 79
Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHA 213
L K +K L I +++ ++ V + L L V+ I
Sbjct: 80 KELPVLIKGIKAL-GITDIKLTTNGLKLLSVLDALVEAGLTSINISLDALDPAVFRNITK 138
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND----------DPEILANLMRTFVE 263
N + I + GI + +V+L+G+ND + ++
Sbjct: 139 NQDLR---AVLDGIEAARHKGIAIKINTVVLRGVNDHQIIPLLEYASARNIPIRFLELMK 195
Query: 264 LRIKPY----YLHHPDLAAGTSHFRLTIEE 289
+ Y Y D ++ +
Sbjct: 196 MGYLHYNESDYFFGMDDIVEKISSVTSVAK 225
>gi|323345215|ref|ZP_08085438.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
gi|323093329|gb|EFZ35907.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
Length = 452
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A + E E++ TG
Sbjct: 160 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASL-VEQARQAVAEGG--KEIVLTGVN 216
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + +++R ++K L ++ V+ R S ++P ++ ELI+ +
Sbjct: 217 IGDFGVTTNERFIDLVKALDKVEGVKRYRISS----LEPDLLDDELIEYCARSR---AFM 269
Query: 211 IHA 213
H
Sbjct: 270 PHF 272
>gi|170760513|ref|YP_001787335.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A3 str. Loch Maree]
gi|226704814|sp|B1KU20|MOAA_CLOBM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|169407502|gb|ACA55913.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
A3 str. Loch Maree]
Length = 319
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL
Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ + K++ I ++ + + + + ++ LK+AG + I +
Sbjct: 73 KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDRVEELKKAGLK-RVNISLDSLK 123
Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + + +I + + G+ + +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167
>gi|313202011|ref|YP_004040669.1| molybdenum cofactor biosynthesis protein a [Methylovorus sp. MP688]
gi|312441327|gb|ADQ85433.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. MP688]
Length = 336
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 17/168 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R D I L + C C +C +M + VLS ++ + I + + +V TG
Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL+ + + + + + ++ ++ L V + ++ + K K + I++
Sbjct: 76 GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQAAALRKAGVKRINISV 128
Query: 212 HANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDD 250
+ + F I AG + SV+++G+NDD
Sbjct: 129 DSLNAERFRNITRVGDLSKVLRGIQAAKEAGFDNIKLNSVIMRGVNDD 176
>gi|294345246|emb|CBL51476.1| conserved radical SAM domain containing hypothetical protein
[Thermus thermophilus]
Length = 375
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 39/222 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RYP + ++ + C + CR C M G LS+++ + + ++ TG
Sbjct: 8 RYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLRLIEEVATYRPKPLLLLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207
GDPL L +++ R +V P P + E++ LKEAG +
Sbjct: 67 GDPLAREDLFL--LMERARA--------LGLKVGLTPAATP-LLTREMVFRLKEAGVTRL 115
Query: 208 YIAIHANHPYE---FSEEA------IAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+++ P F EA + A+S AG+ + + + ++ + L
Sbjct: 116 ALSLDGASPESHDAFRGEAGTFQRTLEALSWAKEAGLPTQVNTTVTR---ENWPEIQALP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
E + + L F + + G ++ L K
Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAK 203
>gi|218780597|ref|YP_002431915.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
alkenivorans AK-01]
gi|218761981|gb|ACL04447.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
alkenivorans AK-01]
Length = 315
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 86/256 (33%), Gaps = 59/256 (23%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + VLS ++ A + I +V TGG+PL+
Sbjct: 1 MSVTDRCNLRCFYCVPEEGLPFLGHKDVLSYEEITAIVQAGVRH-GIQKVRITGGEPLV- 58
Query: 158 SHKRLQKVLKTLRYIKHVQIL-------RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K +++++ ++ + ++ L R S + LK+AG
Sbjct: 59 -RKGIEELVASISALPEIKDLAMTTNGVRLAS-------------MAHDLKKAGLHRVNV 104
Query: 211 -------------IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD--PEIL 254
NH E I +AG+ + V + G+ND +
Sbjct: 105 SLDSMKPEVFEKITGRNHCQE----VKEGIEAALDAGLTPVKINVVAVAGVNDSEFADFA 160
Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHF----RLTIEEGQKIVA-SLKEKIS----G-L 304
M V +R Y H+ ++ E ++I+ L G L
Sbjct: 161 KLTMDKPVSVRFIEY-----MPIGKNMHWAEDRSISSREIREIIEKQLGPMTPVTEHGPL 215
Query: 305 CQPFYILDLPGGYGKV 320
P LPG G++
Sbjct: 216 DGPARRFSLPGAQGEI 231
>gi|82751179|ref|YP_416920.1| hypothetical protein SAB1448c [Staphylococcus aureus RF122]
gi|82656710|emb|CAI81137.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 448
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEMINGLERIRISS----IEASQLTDEVIDVLERSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|325960236|ref|YP_004291702.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
AL-21]
gi|325331668|gb|ADZ10730.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
AL-21]
Length = 320
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 36/185 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + + C V C +C +V + ++ K+ E + + ++ I ++ +GG+PLI
Sbjct: 23 ISITNRCNVKCFYCHHDGIV--PQDYEMTPKEIERIVT-VAKELGIEKIRLSGGEPLIRE 79
Query: 159 HKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ + I +V + + + +++ + L EAG + + +
Sbjct: 80 D-----IVDMVSKIANVGFRDISLTTNGILLEKY------AEKLHEAGLT-RVNVSFDT- 126
Query: 217 YEFSEEAIAAISRL-----ANAGI---------ILLSQSVLLKGINDDPEILANLMRTFV 262
+ E I++ A AGI + V++KGIND+ + ++ +
Sbjct: 127 --LNPETYRFITKRDYMENAKAGIQKAVESGLNPVKVNMVVMKGINDN--EIWDMFQFCR 182
Query: 263 ELRIK 267
E
Sbjct: 183 ETGAI 187
>gi|116672386|ref|YP_833319.1| radical SAM domain-containing protein [Arthrobacter sp. FB24]
gi|116612495|gb|ABK05219.1| Radical SAM domain protein [Arthrobacter sp. FB24]
Length = 533
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 33/207 (15%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q IP + + P+ + L + ++ +L ++ C + C CF
Sbjct: 92 KQHIPDQA-------DNFRPVPEAYAYGLPAMQTQHTCILLQDIIEHCNLRCPTCFTSSG 144
Query: 118 VGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
Q L+ + +A LA +E ++ ++ +GG+P + L ++L+ L
Sbjct: 145 PQLQGVAPLAEVLANVDARLA--RENGRLDVLMLSGGEPTLYP--HLAELLEELVARP-- 198
Query: 176 QILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP-YE---------FSEEA 223
I+R + + + + EL+ L + V + + + P E +
Sbjct: 199 -IVRI---MVNSNGMLMATDDELLALLAKHRDRVEVYLQYDGPSKEASIHHRGGDLTRFK 254
Query: 224 IAAISRLANAGI-ILLSQSVLLKGIND 249
AAISRL+ AG+ L+ + L G+ND
Sbjct: 255 DAAISRLSEAGVFTTLTMTATL-GVND 280
>gi|301166467|emb|CBW26043.1| molybdenum cofactor biosynthesis protein A [Bacteriovorax marinus
SJ]
Length = 328
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 17/167 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R ++ + L C + C +C + + LS + + + + + EV TG
Sbjct: 25 RKIRKLRISLTDKCNLRCHYCMPLDATFMDEQRYLSVDEYAQVVEDLCKF-GLEEVRITG 83
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL+ K + +++ + + + + V + +L + + I++
Sbjct: 84 GEPLL--RKSFKSLVEKIGSLP---LKKIGLTTNAVLLHKYIEDLCEY---RVHHINISL 135
Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ + F++ IS +AG+ + +VL+KG+NDD
Sbjct: 136 DSLNEDRFNKITRSKNFKKVLENISLAKSAGLNIKINTVLMKGVNDD 182
>gi|302347912|ref|YP_003815550.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
gi|302328324|gb|ADL18519.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
Length = 387
Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 32/204 (15%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151
P + + CP+ C C R E + LS + + + E + + ++ FTG
Sbjct: 12 KPLLVFWETTKACPLACIHC-RAEAITRPLPGELSHAEGLELVRQVAEFGRPYPILVFTG 70
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQRINPELIQCLKEAGKPVY 208
GDPL S + + +++ + VP+ P R + + + +GK
Sbjct: 71 GDPL--SREDIWELVDEAHSLG----------VPVAMAPSPSRALLDNLDRIA-SGKVSA 117
Query: 209 IAIHANHPY-EFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANL 257
++I +HP E ++ AI L G+ + + +++ + L +
Sbjct: 118 VSISIDHPSPEVHDKVRRYQGSWEAGVTAIRELIRRGVKVQVNTAVMR---STVDGLPGM 174
Query: 258 MRTFVELRIKPYYLHHPDLAAGTS 281
++ +L + + + +
Sbjct: 175 VKLLKDLGVDVWEVFYLVPVGRAE 198
>gi|251780327|ref|ZP_04823247.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243084642|gb|EES50532.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 434
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G+ + K E + E EVI +G
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + + L +L+ + I + +R S ++P E+I +K K
Sbjct: 198 TASYGVD--LGTDVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK- 250
Query: 207 VYIAIHA 213
+ H
Sbjct: 251 --LCPHF 255
>gi|325662160|ref|ZP_08150778.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|331085957|ref|ZP_08335040.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471609|gb|EGC74829.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406880|gb|EGG86385.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 438
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C M G + ++ ++ + EV+ TG
Sbjct: 148 HTRAYIKVQDGCNQFCTYCIIPYMRGRVRSRR--KEEVVEEVSALAAN-GYKEVVLTGI- 203
Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
LS + L +++ + I+ ++ +R S ++P+ I E L K
Sbjct: 204 --HLSSYGVDFEEKETLLSLIQAVHAIEGIERIRLGS----LEPRIITEEFASALSALPK 257
Query: 206 PVYIAIHA 213
I H
Sbjct: 258 ---ICPHF 262
>gi|228940652|ref|ZP_04103217.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973571|ref|ZP_04134154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980129|ref|ZP_04140444.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228779611|gb|EEM27863.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
Bt407]
gi|228786158|gb|EEM34154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819031|gb|EEM65091.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 340
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101
>gi|148381600|ref|YP_001256140.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
str. ATCC 3502]
gi|148291084|emb|CAL81548.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
str. ATCC 3502]
Length = 430
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + ++ CP+ CR C+ + + ++LS + + L I + + I +V TGG
Sbjct: 108 YPHALCWEITDYCPLNCRHCY----LPEKNNSILSRDNIDNVLE-IIDSAGIQQVQVTGG 162
Query: 153 DPLILSHKRLQKVLKTL 169
+ L L+ ++ +L
Sbjct: 163 EALTHP--ELEYIIDSL 177
>gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
uzoniensis 768-20]
Length = 341
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 34/228 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + VC C FC G G +L++ D + + + + + TGG+PL+
Sbjct: 42 VAVNDVCNFSCIFC---HFEGQLRGVGRLLNADDYGFLVDVLSK-VGVRDYKLTGGEPLL 97
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
S + +++ + V+I + R+ + V +++H P
Sbjct: 98 RSD--IVDIVRKMNR-DGVEI------SMTTNGFRLAELAEDLAAAGLRRVNVSVHTTDP 148
Query: 217 ----------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
E+ + + AG+ + +VLLKGINDD E L +L++ +
Sbjct: 149 EKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGINDDRESLRSLVKLAASIGA 208
Query: 267 KPYYLHHPDLAAGTSHF---RLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ + G+ F R + +E +++ + +P Y
Sbjct: 209 SIQLIELMPVGLGSRVFGDLRASADEVAELLEGMG------ARPAYTR 250
>gi|300087511|ref|YP_003758033.1| radical SAM domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527244|gb|ADJ25712.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 326
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 17/152 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
D + L + C CR C +VGS + G + A L ++ + I V TGG
Sbjct: 31 DTLWLNITTRCNQSCRHC---HVVGSREAGDQMGHGILSACLELLRREPGITTVDITGGA 87
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR-----------FHSRVPIVDPQRINPELIQCLKE 202
P + + + ++ L + ++R R P ++ L
Sbjct: 88 PEL--NPLFESLVSALSEMGKRIVVRHNLTVTLDGDSVGGRSLAHLPGFFAAHRVEILAS 145
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
A ++I ++ RL +AG
Sbjct: 146 LPSCQPTVTDAIRGRRVFAKSIESLKRLRDAG 177
>gi|326941284|gb|AEA17180.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 338
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L K+++ L I V+ +
Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99
>gi|71907086|ref|YP_284673.1| nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
aromatica RCB]
gi|71846707|gb|AAZ46203.1| Nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
aromatica RCB]
Length = 500
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 42/193 (21%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + + LA E Q
Sbjct: 51 AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSELLTPDQAIKKVLAVAAEIPQ 110
Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQ 176
+ + G GDPL + L + + + I HV
Sbjct: 111 MTVLGIAGPGDPLANPGRTFETFEQLSARAPDIKLCVSTNGLNLPQYVDRIAQHNIDHV- 169
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
+ + VDP+ + ++ + K + E+ + L + GI+
Sbjct: 170 TITIN----CVDPE-VGAKIYPWIYWENKRI---TGVEGARILIEQQQKGLQMLTDRGIL 221
Query: 237 LLSQSVLLKGIND 249
+ SVL+ G+ND
Sbjct: 222 VKVNSVLIPGVND 234
>gi|322379439|ref|ZP_08053809.1| Radical SAM [Helicobacter suis HS1]
gi|322380950|ref|ZP_08055016.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
gi|321146622|gb|EFX41456.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
gi|321148148|gb|EFX42678.1| Radical SAM [Helicobacter suis HS1]
Length = 419
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKG-IVHRY--PDRILLKLLHVCPVYCRFCFRREMVG 119
KEE+N L +E++ ++ L ++ + R +K+ C C +C
Sbjct: 99 HKEEINALLQEKQGFFHEDKQECLDQILLSNFVGKTRAFVKIQEGCDFRCSYCIIP--TV 156
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQ 176
+ L+ + + + + + EV+ TG + R L ++ + + ++
Sbjct: 157 RGQSRSLNQDHVLKQIEMLSQ-AGVLEVVLTGTNVGSYGLDRGTNLAHLILKIADLTPIK 215
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANH 215
+R S ++P +IN E ++ L + ++IA+ +H
Sbjct: 216 RVRIGS----LEPSQINTEFLELLDHPILERHLHIALQHSH 252
>gi|326791229|ref|YP_004309050.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
5427]
gi|326541993|gb|ADZ83852.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
5427]
Length = 435
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
R+ +K+ C YC +C + + S+ E + + + + E+I TG
Sbjct: 144 RTRVYVKVQEGCNNYCSYC-----IIPYTRGKIRSRKEEQVVEEVTKLVGLGFKEIILTG 198
Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L + L ++LK + I+ V+ +R S P+ I E I LKE K
Sbjct: 199 IHVLAYGKDLGNTDLIQLLKRVHEIEGVERIRMSSIEPVA----ITDEFIYALKEMPK 252
>gi|118443956|ref|YP_878198.1| tRNA modifying protein [Clostridium novyi NT]
gi|238065369|sp|A0Q0P6|RIMO_CLONN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|118134412|gb|ABK61456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium novyi
NT]
Length = 444
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
+++ C C +C + + S+ E+ + + + E+I G D
Sbjct: 147 AYIRISEGCNNLCTYC-----IIPKIRGKYRSRSIESIINEAKELANMGVKELILVGQDT 201
Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
I RL ++L+ L I+ ++ +R P+ I ELI+ +K K
Sbjct: 202 AIYGSDLYKENRLSQLLRELSNIEDIEWIRI----LYTYPEEITDELIEEIKNNDK 253
>gi|324327466|gb|ADY22726.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 338
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L + ++ L I V+ +
Sbjct: 77 PLL--RRGLPQFIERLNKIDGVEDI 99
>gi|331002254|ref|ZP_08325773.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411348|gb|EGG90764.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 456
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 38/168 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q V T +
Sbjct: 80 LMSDYKSCTNNCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 129
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++++++ L I + H+ +P+ L++ +H
Sbjct: 130 KDADIERIIRFNLAPI----NISVHT----TNPE---------LRKK------MLH---- 162
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ E++ I +L + + Q V+ G ND E+ L
Sbjct: 163 NRFAGESLRYIDKLYEKNVPMNGQVVMCPGYNDGEELRKTLNDLLKYA 210
>gi|323358951|ref|YP_004225347.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
StLB037]
gi|323275322|dbj|BAJ75467.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
StLB037]
Length = 406
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ ++ C + C +C + M + ++S+ + + E+ TGG+PL+
Sbjct: 83 VSVIDKCNLRCTYCMPADGMPWLPQAQLMSADEIRRIVRVAVHSLGAEELRITGGEPLVR 142
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
L+ ++ +R + + Q LK+AG V +++ HP
Sbjct: 143 KD--LEHIIAGIRADNPDLPISLTTNAVG------LDRRAQALKDAGLNRVNVSLDTLHP 194
Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + ++ +A + AG+ + +VLL+GIND
Sbjct: 195 ETFAELTRRPHLDKVLAGLQAARAAGLGPIKINAVLLRGINDT 237
>gi|22298906|ref|NP_682153.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
elongatus BP-1]
gi|22295087|dbj|BAC08915.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
elongatus BP-1]
Length = 332
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 13/173 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C + T L+ + +A + E I V TGG+PL+
Sbjct: 36 LSITDRCNLRCMYCMPVDAAFMPPQTYLTPTEYATIVAELVE-LGIESVRLTGGEPLL-- 92
Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDP--QRINPELIQC-LKEAGKPVYIAIHA 213
+++ L + + + R+ P + L + AI
Sbjct: 93 RAEFAEIVAALVAAGVPQLSLTTNGIRLVPFLPLLAHYGVRRLNISLDSLDPQTFAAISH 152
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
H E AAI+ + G + V++ G+ND L +++ L I
Sbjct: 153 GHHLE---TVKAAIATAVDQGFQVKLNMVVMAGVND--HELVSMVEYAKGLGI 200
>gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
Length = 334
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ A + + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ L+ ++ + I+ VQ + + + P + LKEAG
Sbjct: 66 VRLTGGEPLVRKD--LETLVHKIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117
Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
I I + E + + + I AG+ + VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171
>gi|319443027|ref|ZP_07992183.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
variabile DSM 44702]
Length = 371
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 35/195 (17%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L+ C + C +C E M QK +L++++ + +V FTGG+PL+
Sbjct: 45 ISLIDKCNLRCTYCMPAEGMAWLQKDRLLTAEEAVRIADLGVRIFGVRDVRFTGGEPLVR 104
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI-------VDPQRINPELIQCLKEAGKPVYIA 210
L ++ +R R H +PI +RI+ + L V +
Sbjct: 105 HD--LADIIAGVR--------RLHPEIPISITTNGIGLDKRIDDLVDAGL--TRVNVSLD 152
Query: 211 IHANHP-YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
E + + I + AG+ + +VL++GIND A+L+ V
Sbjct: 153 TVDREAFKELTRRDRLPQVIKGLEAAKAAGLEPVKVNAVLMRGINDTGA--ADLLEWCVT 210
Query: 264 LRIKPYYLHHPDLAA 278
+
Sbjct: 211 RG------YQLRFIE 219
>gi|291563947|emb|CBL42763.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
SS3/4]
Length = 441
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 22/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R +K+ C +C +C G + +D E + I + E++ TG
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRRP--EDVEEEVK-ILAEEGYKEIVLTGIH 198
Query: 153 ------DPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + + + ++ L I ++ +RF S ++P+ I E L
Sbjct: 199 LTSYGID---FKDEGIDFLTLIRRLHEIDGIERIRFGS----LEPRVITEEFASELSRLP 251
Query: 205 KPVYIAIHA 213
K I H
Sbjct: 252 K---ICPHF 257
>gi|253997401|ref|YP_003049465.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
JLW8]
gi|253984080|gb|ACT48938.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
JLW8]
Length = 341
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 32/190 (16%)
Query: 83 HSPLKGIVHRYPDRIL-----------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
+ YPD+++ L + C C +C EM + VLS ++
Sbjct: 2 TEKVPTPTSNYPDKLIDQFGRQVDYIRLSITDRCDFRCTYCMAEEMTFLPRDEVLSLEEC 61
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVP 185
+ + + +V TGG+PL+ + + + + ++ ++ L + +
Sbjct: 62 LRLVKAFVQ-LGVTKVRITGGEPLVRKNAL--WLFEEVGKLERLKELVLTTNGSQLEKQA 118
Query: 186 IVDPQ----RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQ 240
Q RIN L E K + E + + I AG +
Sbjct: 119 ASLKQAGVKRINISLDSLNSERFKKI------TRTGELDK-VLHGIQAAKQAGFDNIKLN 171
Query: 241 SVLLKGINDD 250
+VL++G NDD
Sbjct: 172 TVLMRGTNDD 181
>gi|242373881|ref|ZP_04819455.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
gi|242348435|gb|EES40037.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
Length = 451
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 201
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I ++ +R S ++ ++ E+I+ + + K
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDEIDGLERIRISS----IEASQLTDEVIEVIGNSNK- 253
Query: 207 VYIAIHA 213
V +H
Sbjct: 254 VVRHLHV 260
>gi|134300005|ref|YP_001113501.1| radical SAM domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052705|gb|ABO50676.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
Length = 330
Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C +YC C+R V +++ LS+ + + L I E +IF+GG+PL+
Sbjct: 7 TTNACNLYCEHCYRDAGVKAEEE--LSTDEGKRLLDQIAE-VGFKIMIFSGGEPLMRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ L + LR F + + I PE+ + LKE+G
Sbjct: 63 -----IYELVAHARSKGLRPVFGTNGTL-----ITPEVAKRLKESG 98
>gi|315637089|ref|ZP_07892312.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
gi|315478625|gb|EFU69335.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
Length = 422
Score = 46.3 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G S + + E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLAAN-GFGEFILTGTN 195
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++
Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251
Query: 211 IHANH 215
I H
Sbjct: 252 IALQH 256
>gi|254250659|ref|ZP_04943978.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
PC184]
gi|124879793|gb|EAY67149.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
PC184]
Length = 393
Score = 46.3 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P
Sbjct: 65 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 124
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR SRV + +
Sbjct: 125 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 181
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ L + + +A PV + A I AG + +V+ +G+NDD
Sbjct: 182 DDALFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGMNDD- 227
Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
+ L+R F + Y G S + + ++++
Sbjct: 228 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 274
>gi|310827222|ref|YP_003959579.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612]
gi|308738956|gb|ADO36616.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612]
Length = 436
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 56/174 (32%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C FCF +M + T+ Y+++ + + G+ + L+
Sbjct: 85 MLETRTCKNNCVFCFIDQMPPGMRETL-----------YVKDDDERLSFLL--GNYVTLT 131
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
+ L + +I+R RI P+ I++H +P
Sbjct: 132 N---------LTEAEMERIVR----------YRIM------------PINISVHTTNPEL 160
Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + ++ A+ GI + Q VL G ND L RT +L
Sbjct: 161 RCAMLHNRFAGSIVESLRYFADNGIGMNGQIVLCPGYNDR----DELRRTLNDL 210
>gi|315924411|ref|ZP_07920633.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622290|gb|EFV02249.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 432
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 30/193 (15%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
+ E+I +I+E+ I + + D +AR +E + D
Sbjct: 80 YAQVAPEEISKIEEVDL---------ILGTAHRNRVVDEVAR-----FQEDHHRQVYVSD 125
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + HR R LK+ C +C +C + + S+ ++
Sbjct: 126 ISEQHIFEDMPIAEHRRHTRAFLKVQDGCNQFCTYC-----IVPYARGRIRSRRIDSVCE 180
Query: 137 YIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+Q E + +G L +++ + I V +R S ++P
Sbjct: 181 EVQLLASDGFKEFVLSGIHIASYGKDMPGGPDLLTLIRAVDAIPGVARIRLGS----IEP 236
Query: 190 QRINPELIQCLKE 202
+ + L E
Sbjct: 237 LLMTETFVAGLSE 249
>gi|314935815|ref|ZP_07843167.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
subsp. hominis C80]
gi|313656380|gb|EFS20120.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
subsp. hominis C80]
Length = 340
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ + +A + + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ L K+++ L I+ ++ + + LK+ G+ +Y
Sbjct: 77 PLLRRD--LYKLIEKLNRIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + +E AI+ +L Q V+ KGINDD
Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175
>gi|312135001|ref|YP_004002339.1| Radical SAM domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775052|gb|ADQ04539.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
Length = 341
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ L + E L I + E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEDV-ELAYYGGN-F 64
Query: 156 ILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+++L+ + ++ +R +R P I+ E ++ LK
Sbjct: 65 TAIDMTFQERLLELANSFERIKSIRISTR-----PDCIDDERLRLLKLYNVRTI 113
>gi|323701819|ref|ZP_08113489.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323533123|gb|EGB22992.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 330
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 39/212 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R V +++ L++++ + + I E + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNLYCAHCYRDAGVKAEEE--LNTEEGKRLIDQIAE-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKE-----AGKPVYI 209
+ L + LR F + + I PE+ + LK+ G +
Sbjct: 60 RPD------IFELVAYAKSKGLRPVFGTNGTL-----ITPEVAKRLKDCGAAGMGISLDS 108
Query: 210 AIHANH----PYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
H E + A+ + AG+ + ++ D+ E L +L V
Sbjct: 109 VDPVKHDKFRAQEGCWQAAVEGMRNCRQAGLPFQIHTTVVDWNYDEVEALTDLA---VRE 165
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+++ F + I
Sbjct: 166 GAVAHHVF----------FLVPTGRAVNIEQE 187
>gi|78044693|ref|YP_359280.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996808|gb|ABB15707.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
Z-2901]
Length = 434
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC +C + L S+ E +A +++ +S E++ TG
Sbjct: 144 RAFVKIQEGCNSYCAYC-----IIPYARGPLRSRPLEDVVAEVKKLCQSGFSEIVLTGIH 198
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D +L ++ L I ++ LR S ++PQ EL+ L +
Sbjct: 199 TGAYGQEKQD-----LPKLADLVAELFKIPELKRLRLSS----IEPQDFTVELLDVLANS 249
Query: 204 GK 205
K
Sbjct: 250 PK 251
>gi|296273084|ref|YP_003655715.1| MiaB-like tRNA modifying protein [Arcobacter nitrofigilis DSM 7299]
gi|296097258|gb|ADG93208.1| MiaB-like tRNA modifying enzyme [Arcobacter nitrofigilis DSM 7299]
Length = 421
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G S + + E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQITTLASN-GFGEFILTGTN 195
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++
Sbjct: 196 VGSYGKKKHTSLAKLLKKISLIKGVRRIRMGS----IEPIQIDDEFKEIIDEPFMARHLH 251
Query: 211 IHANH 215
I H
Sbjct: 252 IALQH 256
>gi|328952311|ref|YP_004369645.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452635|gb|AEB08464.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 291
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 32/188 (17%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQ 143
Y R+ L + C + C +C R+ ++ ++S+ + A+ + ++
Sbjct: 19 ARHYFGRLHLPVAAGCNIQCGYCDRKYDCPNESRPGVTSQLLTPQEAIDHVEFILKNHPT 78
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I V G GD L+ VL +R IL + P + + + L+
Sbjct: 79 ISVVGIAGPGDAFHNPAVTLE-VLARIRAAHPDIILCVSTNGLN-LPDYV--DYLSRLRV 134
Query: 203 AGKPVYIAI-----------HANHPYEF--SEEAI--------AAISRLANAGIILLSQS 241
V I + +H EA+ AIS L G+ + +
Sbjct: 135 NFVTVTINTLTPAIGTRIYDYISHHGRIVQGPEAVTILTRLQLQAISLLKRKGLRVKVNT 194
Query: 242 VLLKGIND 249
V++ GIND
Sbjct: 195 VIIPGIND 202
>gi|256752725|ref|ZP_05493574.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
ethanolicus CCSD1]
gi|256748400|gb|EEU61455.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
ethanolicus CCSD1]
Length = 317
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
K ++ ++ IK ++ + + + E+ LKEAG K V I++ +
Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNG------TMLYEMADTLKEAGLKRVNISLDSLKK 124
Query: 214 NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + ++ AI + + G+ + +V++KGINDD
Sbjct: 125 DRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167
>gi|224436696|ref|ZP_03657700.1| hypothetical protein HcinC1_02049 [Helicobacter cinaedi CCUG 18818]
gi|313143194|ref|ZP_07805387.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128225|gb|EFR45842.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 427
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C C +C V + + K + L +S I EV+ TG +
Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PSVRGKARSYPKDKILKQILT--LAESGISEVVLTGTN 191
Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206
L +++ + + ++ LR S ++P +I+ E + L+ E
Sbjct: 192 VGSYGRDLDSNLAGLIREIYNLGVLRRLRIGS----LEPSQIDSEFKEVLELPIMEKHLH 247
Query: 207 VYI 209
+ +
Sbjct: 248 IAL 250
>gi|253582853|ref|ZP_04860072.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
ATCC 27725]
gi|251835287|gb|EES63829.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
ATCC 27725]
Length = 325
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C++C R M K +L+ ++ + + I K I ++ TGG+PL+
Sbjct: 14 LSVTDRCNLRCQYCMSERNMNFLPKEELLTVEEIKRIVT-IFSKIGIKKIRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
K ++L+ L IK+++ + + + E L + G K + I++ +P
Sbjct: 72 -RKNFTEILENLHSIKNIEEISMTTNGL------LLEENFDSLVKNGVKKINISLDTLNP 124
Query: 217 ---YEFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
E + + I I + + G+ I L+ VL+KG ND+
Sbjct: 125 VLYSEITRGGSFNQVIKNIFKALDIGMERIKLN-IVLIKGKNDN 167
>gi|291542169|emb|CBL15279.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
bromii L2-63]
Length = 446
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 16/170 (9%)
Query: 67 LNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFC----FRREMVGS 120
L L ++ + D PL+G I+ P LK+ C C +C R
Sbjct: 115 LETLDGQKCESFPDKVCLPLEGGRILSTPPYTAYLKIAEGCDNRCSYCAIPMIRGRFRSR 174
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V+ + A + + G D L ++L+ L I + +R
Sbjct: 175 DIEDVVKEAEGLAERGVKELNVIAQDTTRFGEDKY--GKPMLAELLRRLCRIDGFKWIR- 231
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
V P RI ELI + K V Y+ I H + + ++R
Sbjct: 232 ---VLYCYPDRITDELIDTIAGEDKIVKYMDIPLQH---CDGDVLRRMNR 275
>gi|330686411|gb|EGG98011.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
epidermidis VCU121]
Length = 341
Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G L ++ E ++ + + + ++ TGG+
Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L ++++ L I+ ++ + + LK+ G+ +Y
Sbjct: 78 PLL--RRNLYQLIEQLNQIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I I + ++E AI+ +L Q V+ KGINDD
Sbjct: 123 RINISLDA---INDEVFQAINNRNIKASTILEQIDYAISIGFEIKVNVVIQKGINDD 176
>gi|206975055|ref|ZP_03235969.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|229138875|ref|ZP_04267455.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST26]
gi|206746476|gb|EDZ57869.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|228644606|gb|EEL00858.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST26]
Length = 337
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +LS + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|217959681|ref|YP_002338233.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|217066262|gb|ACJ80512.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 337
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +LS + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEGHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|85857996|ref|YP_460198.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
gi|85721087|gb|ABC76030.1| molybdenum cofactor biosynthesis protein A [Syntrophus
aciditrophicus SB]
Length = 329
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C E + +LS +D ++ + I ++ TGG+PL+
Sbjct: 17 ISVTDRCNLRCRYCMPEEGISKLDHREILSLEDIVRSVK-VAAGVGIRKIRLTGGEPLVR 75
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPV 207
+ +++ + + + + + + R+N + + E + +
Sbjct: 76 KD--IARLIGFISEVPEIDDIAMTTNGVLFADMAEQLKAAGLDRVNFSMDTMVSEKFRYI 133
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
H + AI + G+ + +V+++G NDD
Sbjct: 134 SRRDHL-------ADVRKAIFKALELGLEPVKINTVVIRGFNDD 170
>gi|289523492|ref|ZP_06440346.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503184|gb|EFD24348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 463
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 21/154 (13%)
Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
NDPI R P + ++L ++ D + S + + R +K+ C +C +C
Sbjct: 120 NDPIER---PLFLKKDVLSNDKWDAL---ELSRVT-----FHTRSFVKVQDGCNRFCSYC 168
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTL 169
+ G + T S K+ + + + EV+ TG G L ++ L
Sbjct: 169 IVPFLRG--RPTSRSVKEVAEEVKRLVDH-GCKEVVLTGIHLGLYGYGCDFDLGDLINAL 225
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I+ ++ LRF S ++P ++ LI L E+
Sbjct: 226 SRIEGLRRLRFGS----IEPHALSDRLIDVLAES 255
>gi|328911014|gb|AEB62610.1| oxygen-independent coproporphyrinogen III oxidase, putative
[Bacillus amyloliquefaciens LL3]
Length = 522
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 176 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 235
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ ++++ ++ + F GG P ++ + + + + + R +V+ +R + V P
Sbjct: 236 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 294
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I E + L + + I P + E + AI R +V
Sbjct: 295 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 334
Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
E + L R I + DL GT+ FR +++E +K++
Sbjct: 335 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 379
>gi|218903282|ref|YP_002451116.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|218538331|gb|ACK90729.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
Length = 337
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
+ ++ C C +C E+ G + +L+ + E +I+ + ++ TGG
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
+PL+ L ++ L + ++ + + + Q + LKEAG K V I++
Sbjct: 76 EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127
Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 128 DAIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|150390422|ref|YP_001320471.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
QYMF]
gi|238065283|sp|A6TRJ4|RIMO_ALKMQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|149950284|gb|ABR48812.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
QYMF]
Length = 446
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
+K+ C YC +C ++ G + + ++ + + E+I D
Sbjct: 147 AYIKISDGCDNYCTYCIIPKLRGKYRSRKM--ENIIQEAQTLANN-GVKEIILIAQDTTR 203
Query: 154 -PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + RL +L L ++ +Q +R P+ I ELI +K K
Sbjct: 204 YGIDLYDEYRLSALLDKLSEVEGIQWIRI----LYCYPEMITDELIATIKNNDK 253
>gi|154503579|ref|ZP_02040639.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
gi|260589912|ref|ZP_05855825.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
gi|153795679|gb|EDN78099.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
gi|260539719|gb|EEX20288.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
Length = 426
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 19/173 (10%)
Query: 72 EEREDPIGDNNHSPLKGIV--HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+E+ P+ +K I H + + L + C + C FC + +
Sbjct: 51 QEKLFPVWKQQTEFIKEIENNHEKINTVYLMVTRKCNMNCDFCAISANDKLRPEKEFKLE 110
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPI 186
D + + +K++ ++I TGG+PLI ++ ++ K LR + S
Sbjct: 111 DIQNKVIPFFQKNKPHKMILTGGEPLI--KDQIVEIAKALRNGLTCP----ITLQSNGLA 164
Query: 187 VDPQRINPELIQCLKEAGKPVYIAI-H-ANHPYEFSEEAIAAISRLANAGIIL 237
I EL + LK + + H P E ++ I I AGI +
Sbjct: 165 -----ITRELTEQLKGYIDEIDFSTMHMFGTP-EKEQQLINHIEMCQQAGIKV 211
>gi|330835443|ref|YP_004410171.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329567582|gb|AEB95687.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 352
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 103/287 (35%), Gaps = 55/287 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++L+ C + CR C + G L++++ ++ + + S + + +GGD
Sbjct: 4 PYVVVLESTKACDLACRHCRANALPNRLPGE-LTTEEVKSLVEDLSS-SGVKLFVVSGGD 61
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--P--QRINPELIQCLKEAGKPVYI 209
L + + + ILR+ SR P RIN ++ + +KE G + +
Sbjct: 62 AL-----KRDDIFE---------ILRYSSRRLNTALSPSGSRINLDVAKKIKETGVSI-V 106
Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+I + P E +E A AI L G+ + + + K + E L +L+R
Sbjct: 107 SISVDGPEEVHDEFRGVKGAFKMAKGAIESLKEVGVPVQINTTISKY---NVEKL-DLLR 162
Query: 260 TFVELRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYI 310
VE P + + T ++ ++ + ++ + + + GL P+ +
Sbjct: 163 EVVE-GFNPAFWDIFMLIPTGRATKEMMISPDQAEIVMKRVTEWRSDGLNVRMTCAPYLV 221
Query: 311 LDLPGGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347
+ + I Y + V+
Sbjct: 222 RVMNELNVTNPLPPDRIYGRRSVNGARGCMAGNGYAFISYDGTVYPC 268
>gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus
kodakarensis KOD1]
gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
kodakarensis KOD1]
Length = 419
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
G++ R + I ++ + C + C FC E S+ + D + + + E ++I
Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167
Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
E G G+PLI + ++++ LR +V ++ S + +N +L++ L E
Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LNDKLVEELAE 220
Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246
AG V ++IH + + L NAGI +L V++ G
Sbjct: 221 AGLDRVNLSIH-----SLDPDKAKMLMGRKDYDLQHVLDMAEALVNAGIDVLIAPVIIFG 275
Query: 247 INDD 250
+ND+
Sbjct: 276 VNDN 279
>gi|294782047|ref|ZP_06747373.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 1_1_41FAA]
gi|294480688|gb|EFG28463.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 1_1_41FAA]
Length = 342
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I EV
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 -KPVYIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240
K + + I H N YE + + G L Q
Sbjct: 114 VKTIELGIQSLDDEVLKATGRHYN--YEI---VKKSCDLIKKYGFTLGVQ 158
>gi|291542691|emb|CBL15801.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus bromii
L2-63]
Length = 457
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 92 RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
+ + ++ L + H C + C +CF + + ++S + + A+ ++ E S
Sbjct: 92 KKRNTVIKALCLHIAHTCNLNCEYCFASQGKYHGERALMSFEVGKRAIDFLIENSGSRVN 151
Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
EV F GG+PL ++ +++++ R I +H + RF + ++ ++I+ +
Sbjct: 152 LEVDFFGGEPL-MNFDVVKQIVAYARSIEKEHNKNFRF---TLTTNGMLVDDDVIEFANK 207
Query: 203 AGKPVYIAI 211
V +++
Sbjct: 208 ECHNVVLSL 216
>gi|126700065|ref|YP_001088962.1| putative radical SAM superfamily protein [Clostridium difficile
630]
gi|254976042|ref|ZP_05272514.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-66c26]
gi|255093430|ref|ZP_05322908.1| putative radical SAM superfamily protein [Clostridium difficile CIP
107932]
gi|255101608|ref|ZP_05330585.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-63q42]
gi|255307477|ref|ZP_05351648.1| putative radical SAM superfamily protein [Clostridium difficile
ATCC 43255]
gi|255315175|ref|ZP_05356758.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-76w55]
gi|255517844|ref|ZP_05385520.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-97b34]
gi|255650960|ref|ZP_05397862.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-37x79]
gi|260684029|ref|YP_003215314.1| putative radical SAM superfamily protein [Clostridium difficile
CD196]
gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile
R20291]
gi|306520839|ref|ZP_07407186.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-32g58]
gi|115251502|emb|CAJ69335.1| putative MiaB-like tRNA modifying enzyme [Clostridium difficile]
gi|260210192|emb|CBA64398.1| putative radical SAM superfamily protein [Clostridium difficile
CD196]
gi|260213706|emb|CBE05587.1| putative radical SAM superfamily protein [Clostridium difficile
R20291]
Length = 432
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D ++ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195
Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + +L V+K + I+ ++ +R S V+P E + + + K
Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINQIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251
>gi|4104517|gb|AAD02057.1| unknown [Clostridium acetobutylicum DSM 1731]
Length = 386
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C G + SK+ E + I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD L L +++ I ++ +R S ++P+ + + I +K K
Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---MCPHF 255
>gi|15894568|ref|NP_347917.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
gi|15024215|gb|AAK79257.1|AE007641_3 Fe-S oxidoreductases [Clostridium acetobutylicum ATCC 824]
gi|325508700|gb|ADZ20336.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
Length = 436
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C G + SK+ E + I+ ++ E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD L L +++ I ++ +R S ++P+ + + I +K K
Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---MCPHF 255
>gi|11499786|ref|NP_071029.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus
DSM 4304]
gi|3334443|sp|O28079|Y2204_ARCFU RecName: Full=Uncharacterized protein AF_2204
gi|2648320|gb|AAB89048.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus
DSM 4304]
Length = 412
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYP-----DRILLKLLHVCPVYCRFCFRREMV 118
+EE+ ER+D + + + RY + C C +C+ +
Sbjct: 26 REEVERFYRERKDALLEE--------MQRYRFEVDIRTAYINPTESCNRNCPYCYIPAEI 77
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
++GT +S + E L + E + VIF G +PL++ + +
Sbjct: 78 -RERGTKMSYEKLEEILTVLAEN-GVERVIFHGAEPLMVKDEIFRA 121
>gi|294053874|ref|YP_003547532.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
akajimensis DSM 45221]
gi|293613207|gb|ADE53362.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
akajimensis DSM 45221]
Length = 335
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 40/190 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ L C + C +C +E+ G K L + +A +A + ++ TGG+
Sbjct: 15 ISLTDRCNLRCTYCMPKEVFGPDYVFLKKQEWLRFSELDAVVAAFVR-LGVRKLRLTGGE 73
Query: 154 PLILSHKRLQKV--LKTLRYIKHVQI----LRF----------HSRVPIVDPQRINPELI 197
PL L L+ + L+ I+ V + +R + V ++ +L
Sbjct: 74 PL-LRPGLLKYIEGLRRFEPIEDVALTTNGMRLAEKVGDLKAAGLKRVTVSLDALDADLC 132
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAA-ISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ G + + A I AG+ + V+ +G+ND E+L
Sbjct: 133 GRMNGRG--------------IGPKVVLAGIDAALKAGLGVKVNMVVERGVND-AEVL-P 176
Query: 257 LMRTFVELRI 266
++R F + +
Sbjct: 177 MVRYFKSIGV 186
>gi|269215615|ref|ZP_06159469.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
700122]
gi|269131102|gb|EEZ62177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
700122]
Length = 423
Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
+R + D + + G +P R+ +K+ C C FC V + +
Sbjct: 135 ADRSFALSDAAAARVGGS---FPTRVPVKIQDGCDNACTFCIV--HVARGRSRSRDAAAV 189
Query: 132 EAALAYIQEKSQIWEVIFTGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
E ++ + + + E++ +G + L + + L LR S ++P
Sbjct: 190 EREVSALGA-AGVREIVLSGINLGRYRCGDAGLATLAERLLSCAPETRLRISS----IEP 244
Query: 190 QRINPELIQCLKEAGKPVYIAIH 212
Q ++ LI+ + +G V +H
Sbjct: 245 QSVDDALIEVMATSGGRVCRHLH 267
>gi|295103959|emb|CBL01503.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
prausnitzii SL3/3]
Length = 441
Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113
E E+ + G PL G R++ LK+ C C +C
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168
R + ++ A + E+I DP + ++L
Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217
L + ++ +R P+RI E I +K K V Y+ + H
Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275
Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246
E + I +L GI L + L+ G
Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304
>gi|291543502|emb|CBL16611.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus sp.
18P13]
Length = 447
Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 20/152 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C C +C + G + + +D ++ E +
Sbjct: 147 AYLKIAEGCNNCCTYCAIPMIRGGFR--SVPMEDVLEEARWLTEHGVTELTVIAQDTTRY 204
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + RL ++L+ L I+ ++ +R V P+RI +L++ + K V Y+
Sbjct: 205 GED--LYGESRLPELLEQLCRIQGIRWIR----VLYCYPERITDKLLEVMAREEKLVKYL 258
Query: 210 AIHANHPYEFSEEAIAAISRLANAG--IILLS 239
I H + + + ++R +AG LL+
Sbjct: 259 DIPIQH---CNGDILRRMNRQGDAGTLAALLN 287
>gi|160942860|ref|ZP_02090099.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
M21/2]
gi|158445761|gb|EDP22764.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
M21/2]
Length = 441
Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113
E E+ + G PL G R++ LK+ C C +C
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168
R + ++ A + E+I DP + ++L
Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219
Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217
L + ++ +R P+RI E I +K K V Y+ + H
Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275
Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246
E + I +L GI L + L+ G
Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304
>gi|222823704|ref|YP_002575278.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
gi|222538926|gb|ACM64027.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
Length = 418
Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C + G K + S + + + + EV+ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRG--KSRSIPSDEIIKQIKLLAQN-GYSEVVLTGTN 188
Query: 154 --PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L K L K+L+ + I ++ +R S ++P +I+ + L E ++
Sbjct: 189 IGSYGLKDKTTLGKLLQEIGKINGIKRVRLGS----LEPAQIDESFKEILDEPWLERHLH 244
Query: 211 IHANHPYE 218
I H +E
Sbjct: 245 IALQHTHE 252
>gi|27262458|gb|AAN87510.1| molybdenum cofactor biosynthesis protein A [Heliobacillus mobilis]
Length = 327
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 21/175 (12%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C + + VL ++ E + I I V TGG+PL+
Sbjct: 14 VSVTDRCNLRCVYCMPEQGIPLVDHEEVLRFEEFEQLIR-IAAAEGIRRVRVTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
K + + ++ I ++ + + + PQ + LK AG V I++ P
Sbjct: 72 -RKGIVDFVARVKEIPGIEDVALTTNGIL-LPQ-----FARDLKAAGLNRVNISLDTLRP 124
Query: 217 YEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTF 261
F A I + G+ + V++ G+NDD A L
Sbjct: 125 ERFLSITRTGQVKDVWAGIEAALDEGLHPVKLNVVVMGGVNDDEVVDFARLTERL 179
>gi|228927225|ref|ZP_04090288.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121710|ref|ZP_04250933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228661754|gb|EEL17371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228832551|gb|EEM78125.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 337
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
+ ++ C C +C E+ G + +L+ + E +I+ + ++ TGG
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
+PL+ L ++ L + ++ + + + Q + LKEAG K V I++
Sbjct: 76 EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127
Query: 212 -----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND+
Sbjct: 128 DAIEDHVFKKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDN 175
>gi|163781559|ref|ZP_02176559.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp.
128-5-R1-1]
gi|159882779|gb|EDP76283.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp.
128-5-R1-1]
Length = 332
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 97 ILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + + C C FC +E+ Q+ +LS ++ + + + + TGG+P
Sbjct: 13 VRISVTDRCNFRCFFCMPPDKEIEFLQRSELLSYEEIARLVGVLVS-LGVRKARITGGEP 71
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L+ +++ L I+ ++ + + ++ +L + K V +++
Sbjct: 72 LM--RAHLENLVEKLASIEGLRDI-----ALTTNGYTLDRKLDSLVSAGLKRVTVSLITL 124
Query: 215 HPYEFSE---------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ +F+ I I G+ + V+++G+NDD
Sbjct: 125 NQDKFTSMVGRDVSLNRVIEGIRSARQMGLNPVKVNMVVVRGVNDD 170
>gi|314933749|ref|ZP_07841114.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
gi|313653899|gb|EFS17656.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
Length = 448
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHV 257
>gi|255656429|ref|ZP_05401838.1| putative radical SAM superfamily protein [Clostridium difficile
QCD-23m63]
gi|296450124|ref|ZP_06891885.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
gi|296878505|ref|ZP_06902510.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
gi|296260887|gb|EFH07721.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
gi|296430312|gb|EFH16154.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
Length = 432
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D ++ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195
Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + +L V+K + I+ ++ +R S V+P E + + + K
Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINKIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251
>gi|138894319|ref|YP_001124772.1| coenzyme PQQ synthesis protein PqqE [Geobacillus
thermodenitrificans NG80-2]
gi|134265832|gb|ABO66027.1| Coenzyme PQQ synthesis protein PqqE [Geobacillus
thermodenitrificans NG80-2]
Length = 372
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L K I + LR S P P + E I+ KE G +
Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116
Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260
I H F I AI L I + +V+ + N + + L+
Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174
Query: 261 F 261
Sbjct: 175 L 175
>gi|145220314|ref|YP_001131023.1| MiaB-like tRNA modifying enzyme [Prosthecochloris vibrioformis DSM
265]
gi|145206478|gb|ABP37521.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeovibrioides DSM
265]
Length = 451
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 15/123 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LKL C C +C + + +V + A + S E++ TG
Sbjct: 153 RTRAFLKLQDGCDYGCAYCTI-PLARGRSRSVPPEVVLQQAQ--MLADSGYREIVLTGVN 209
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + L+ +L+ L I V +R S ++P + EL+ + + I
Sbjct: 210 TGDYRSGTTGFLE-LLRMLEDID-VPRIRISS----LEPDILTDELVALVAASRT---IV 260
Query: 211 IHA 213
H
Sbjct: 261 PHF 263
>gi|223044380|ref|ZP_03614414.1| conserved hypothetical protein [Staphylococcus capitis SK14]
gi|222442249|gb|EEE48360.1| conserved hypothetical protein [Staphylococcus capitis SK14]
Length = 448
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHV 257
>gi|260460192|ref|ZP_05808444.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033837|gb|EEW35096.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
Length = 382
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--------E 146
D +LLK+ C + C +C+ M G + + ++A + + ++
Sbjct: 12 DTVLLKVASRCNLDCSYCYIYHM-GDEAWRSQPKQMSDAVIQMVAQRLSDQLALQAVPFS 70
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
V+ GG+PL+L RL+ TLR + H + + I+ +I L
Sbjct: 71 VVLHGGEPLLLGATRLEHFCATLRGVLPHPCGIHIQTNG-----ALISDRIIDVLVRYDV 125
Query: 206 PVYIAI 211
V ++I
Sbjct: 126 GVSVSI 131
>gi|154482583|ref|ZP_02025031.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
27560]
gi|149736608|gb|EDM52494.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
27560]
Length = 437
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + + + +A L + S E++ TG +
Sbjct: 147 HTRAHLKIQDGCNNFCSYCIIPYARGRIRSRTM--ESIKAELERLSA-SGFKEIVLTGIN 203
Query: 154 PLILSHKRLQKVLKTLRYIKHV---QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L +K++ + +V + +R S +DP+ + + ++ L + K +
Sbjct: 204 -LSCYDDNGKKLIDVIEMADNVNGIERIRLGS----LDPEVVTEDFVERLGKV-KKICPH 257
Query: 211 IHAN 214
H +
Sbjct: 258 FHFS 261
>gi|251796225|ref|YP_003010956.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
gi|247543851|gb|ACT00870.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
Length = 448
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + S E A + EV+ TG
Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSV-LEQAKQLVAS--GYKEVVLTGIH 198
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD + + RL +L L I+ ++ +R S ++ +I+ +I L + K +
Sbjct: 199 TGGYGD--DMENYRLVDLLWDLDKIEGLERIRISS----IEASQIDDAMIDVLNRSTK-M 251
Query: 208 YIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237
+H P + ++E A + R+ A G+ +
Sbjct: 252 CRHLHI--PLQAGDTSVLKRMRRKYTTDEFAAKLKRIREAMPGVAI 295
>gi|297531022|ref|YP_003672297.1| radical SAM protein [Geobacillus sp. C56-T3]
gi|297254274|gb|ADI27720.1| Radical SAM domain protein [Geobacillus sp. C56-T3]
Length = 372
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L K I + LR S P P + E I+ KE G +
Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116
Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261
I H + I AI L I + +V+ + N + +A L+
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMAALVEKL 175
>gi|296132657|ref|YP_003639904.1| Radical SAM domain protein [Thermincola sp. JR]
gi|296031235|gb|ADG82003.1| Radical SAM domain protein [Thermincola potens JR]
Length = 331
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 49/217 (22%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G++ L++++ +A L I + + +IF+GG+P +
Sbjct: 3 VSWNTTNQCNMYCDHCYRDA--GAKATEELNTEEGKALLDEIAK-AGFKIMIFSGGEPFM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAGKP-VYIAIHA 213
+ ++ H + L H P+ + I P++ + LKE G V I++
Sbjct: 60 RED--IFDLVA------HAKKLGLH---PVFGTNGTLITPDVAKKLKELGVMGVGISL-- 106
Query: 214 NHPYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMR 259
+E + +L AG+ + L+ D+ E + +
Sbjct: 107 ---DSLDKEKHDNLRKLKGAWDGAVQGMINCREAGVPFQVHTTLMDWNYDEAEAITDFA- 162
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
VE+ K ++ F + + I
Sbjct: 163 --VEIGAKAHHFF----------FLVPTGRAKNIEEE 187
>gi|56963428|ref|YP_175159.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
gi|56909671|dbj|BAD64198.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
Length = 445
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC G ++ S+D + + Q+ + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVRQAQQLVHAGYKEIVLTG 196
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L L ++L+ L ++ ++ LR S ++ ++ E+I + ++
Sbjct: 197 IHTGGYGED---LKDYSLARLLEDLEKVEGLKRLRISS----IEASQLTDEVIAVIGKSS 249
Query: 205 KPVYIAIHA 213
K V +H
Sbjct: 250 K-VVRHMHI 257
>gi|196248072|ref|ZP_03146774.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
gi|196212856|gb|EDY07613.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
Length = 372
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L K I + LR S P P + E I+ KE G +
Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116
Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260
I H F I AI L I + +V+ + N + + L+
Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174
Query: 261 F 261
Sbjct: 175 L 175
>gi|222055074|ref|YP_002537436.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
gi|221564363|gb|ACM20335.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
Length = 438
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R L++ + C +C +C + S E ALA I+ + EV+ T
Sbjct: 145 HTRAFLQVQNGCDAFCSYC-----IVPYARGRSRSVSLEEALAGIRTFAERGFKEVVLTG 199
Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
G L L+ L +L + V+ +R S V+P ++ LI L ++
Sbjct: 200 IHLGAYGLDLNPPLSLLDLLNAAEKERLVERIRIGS----VEPTEVSDALISFLAKSATV 255
Query: 206 --PVYIAIHANHPYEFSEEAIAAISR 229
++I + + H + A++R
Sbjct: 256 CPHLHIPLQSGHDR-----VLKAMNR 276
>gi|261368034|ref|ZP_05980917.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
15176]
gi|282570022|gb|EFB75557.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
15176]
Length = 446
Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 35/172 (20%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C +C R + ++ A + E+I
Sbjct: 147 AYLKIAEGCNNRCHYCAIPLIRGPLRSRPIEDCVAEARWLAG-------EGVRELILVAQ 199
Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DP + ++L L+ I ++ +R P+RI+ I + K V
Sbjct: 200 DPTAYGEDWGKPGAVCELLDRLQQIDGIRWIRI----LYAYPERISDAFIAAMVRNTKVV 255
Query: 208 -YIAIHANHPYEF----------SEEAIAAISRLANA--GIILLSQSVLLKG 246
Y+ + H + + AI+RL A GI L + L+ G
Sbjct: 256 PYLDLPIQHCDDAVLKAMNRRGGRADIEDAIARLRAAIPGITLR--TTLIAG 305
>gi|317503044|ref|ZP_07961124.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
gi|315665844|gb|EFV05431.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
Length = 446
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + +SS K E A A E++ TG
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTISSLIKQAEEAAA-----EGGKEIVLTG 207
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD +H+R ++K L ++ ++ R S ++P I+ ELI E+
Sbjct: 208 VNIGDFGETTHERFIDLVKALDKVEGIKRFRISS----LEPDLIDDELIAFCAESR---A 260
Query: 209 IAIHA 213
H
Sbjct: 261 FMPHF 265
>gi|225011453|ref|ZP_03701891.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
MS024-2A]
gi|225003956|gb|EEG41928.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
MS024-2A]
Length = 335
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
H Y + + L C + C +C +E V L + + +LA + K+ + ++ T
Sbjct: 16 HNY---LRISLTERCNLRCSYCMPQEGVTLTPKPQLMNAEEIFSLAALFVKNGVNKIRLT 72
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
GG+PL+ +L L + VQ+ + I I LK++G + I
Sbjct: 73 GGEPLVRKD--FPDILSRLSQLP-VQL------SLTSNAFSI-DRHIPLLKDSGVHSINI 122
Query: 210 AI---HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ A E + ++ I +L G + +VL+KGINDD
Sbjct: 123 SLDTLQAKRFQEITFRNYFDQVHQNILKLIREGFNVKINAVLMKGINDD 171
>gi|153854410|ref|ZP_01995688.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
gi|149752936|gb|EDM62867.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
Length = 442
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 29/153 (18%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127
+E D + + L R +K+ C +C +C R + + +VL
Sbjct: 134 QEILDINHEKVYEDLHLSTAAEHTRAYIKVQDGCNQFCSYCIIPFARGRVRSRSRDSVLD 193
Query: 128 SKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
T +A Y EV+ T G D L ++ + ++ ++ +R
Sbjct: 194 EVKTLSANGY-------KEVVLTGIHLSSYGIDC----DDNLLSLILAIHEVEGIERIRL 242
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
S ++P+ I E Q + + K + H
Sbjct: 243 GS----LEPRIITEEFAQTIAKLPK---MCPHF 268
>gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bacteroides vulgatus PC510]
gi|294448016|gb|EFG16585.1| radical SAM domain protein [Bacteroides vulgatus PC510]
Length = 433
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R+ + C + C+ CF + + SS DT+ L+ + + I + TGG+
Sbjct: 107 PERVDFLITKHCNLACKHCFEGSSPSFEVKRI-SSSDTDRILSQFEA-ANIQTLKITGGE 164
Query: 154 PLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
P + L + I+ H + + + +++ QRI+ +K+ + I++
Sbjct: 165 PFSHPD--IDNFL--FKAIQCHFETI-ILTNALLLNKQRID-----MIKKGHIQLGISL 213
>gi|302541833|ref|ZP_07294175.1| putative radical SAM domain protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302459451|gb|EFL22544.1| putative radical SAM domain protein [Streptomyces himastatinicus
ATCC 53653]
Length = 326
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 13/149 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL + CPV C C + + + + ++ V +GG+P +
Sbjct: 20 VLLFITDRCPVGCAHCSVDSRP--DSPRITDHALFASIVDQLAALPELRMVGISGGEPFV 77
Query: 157 LSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRIN--PELIQCLKEAGKPVYIAIHA 213
+ L + L HV + R + P+ I + E VY++ A
Sbjct: 78 -ERRALALAVTRLAAADKHVVLYTSG-----FW-ARSDHAPQWIHRVLEQSAAVYLSTDA 130
Query: 214 NHPYEFSEE-AIAAISRLANAGIILLSQS 241
+H E A +A G+ ++ Q+
Sbjct: 131 HHVASQGPERFRNAARIIARHGLPIVVQA 159
>gi|157737373|ref|YP_001490056.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
gi|114461634|gb|ABI75082.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri]
gi|157699227|gb|ABV67387.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
Length = 422
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G S + + E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLASN-GFGEFILTGTN 195
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++
Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251
Query: 211 IHANH 215
I H
Sbjct: 252 IALQH 256
>gi|189501679|ref|YP_001957396.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497120|gb|ACE05667.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
5a2]
Length = 441
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 20/128 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C FC S E+ + + I E++ TG
Sbjct: 140 RTRTFLKVQDGCNYHCSFCTI-----PLARGKSRSDTIESIVEQARKIADQGIKEIVLTG 194
Query: 152 ---GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD I+ ++R +++ L + ++ R S ++P + E+IQ + ++G+
Sbjct: 195 VNIGDYGIIDNRRQTNFLSLIEALEKVVDIKRFRISS----IEPNLLTDEIIQFVAQSGR 250
Query: 206 PVYIAIHA 213
H
Sbjct: 251 ---FVPHF 255
>gi|329122066|ref|ZP_08250674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
DSM 19965]
gi|327466873|gb|EGF12389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
DSM 19965]
Length = 445
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
R +K+ C YC FC + L S+ E A+ I++ + EV+ TG
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + + L ++ L I ++ +R S ++ ++ ELI +K K
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262
Query: 207 VYIAIH 212
V +H
Sbjct: 263 VCHHLH 268
>gi|308172965|ref|YP_003919670.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
amyloliquefaciens DSM 7]
gi|307605829|emb|CBI42200.1| oxygen-independent coproporphyrinogen III oxidase, putative
[Bacillus amyloliquefaciens DSM 7]
gi|328552610|gb|AEB23102.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
Length = 500
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ ++++ ++ + F GG P ++ + + + + + R +V+ +R + V P
Sbjct: 214 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 272
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I E + L + + I P + E + AI R +V
Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312
Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
E + L R I + DL GT+ FR +++E +K++
Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 357
>gi|299136219|ref|ZP_07029403.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
gi|298602343|gb|EFI58497.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
Length = 370
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQ------EK 141
D +L+K+ C + C +C+ V +Q T +S + E + + +
Sbjct: 4 DTVLIKVASRCNINCSYCY----VYNQGDTSWQRMPKHMSFEIVEDVIRQLATLYRDQDH 59
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ V+ GG+PL+L L+ +LK L + SR + I+ +L++
Sbjct: 60 P--FAVVLHGGEPLLLPRNILEALLKGLADCLPAT-----CSRSIQTNGTLIDDDLLELC 112
Query: 201 KEAGKPVYIAI 211
G + ++I
Sbjct: 113 VRTGTTLSVSI 123
>gi|160946408|ref|ZP_02093617.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
gi|158447524|gb|EDP24519.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
Length = 480
Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 25/156 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C CR CF + + G ++ + + + + V+ TGG+PL+
Sbjct: 127 MVLTTKCNFRCRHCFIK---NNSDGFTMNFLLWKRIIDKL-CNQGLTSVVVTGGEPLLYK 182
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L + + + L H + + I+ I+ +++ V + + +
Sbjct: 183 E------LTPILNYINDKKLNIH---LLTNGYLIDDNFIEEIRKF-NNVIVQVSLDGSNS 232
Query: 219 FS-----------EEAIAAISRLANAGIILLSQSVL 243
+ + I +L ++GI++ VL
Sbjct: 233 ITQKYQRLIENSFDVVTKNIKKLTDSGIVVNVAMVL 268
>gi|94263035|ref|ZP_01286854.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
gi|93456578|gb|EAT06686.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
Length = 338
Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L + C + CR+C + + +LS ++ E + + I +V TGG+PL+
Sbjct: 25 VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + LR I ++ L + + ++ ++ L+ +G + + +
Sbjct: 84 --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137
Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260
+ I GI L +V+ +GIN D+ LA L
Sbjct: 138 RFATITGQDLFGRVFKVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRYI 197
Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
DLA +HF+ + E +IV
Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234
>gi|323486972|ref|ZP_08092287.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum
WAL-14163]
gi|323399744|gb|EGA92127.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum
WAL-14163]
Length = 450
Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 82 LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
K + +++K L I + S ++CL +H
Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ +A+ I L A I + Q VL K +ND E+ ++
Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206
>gi|313891670|ref|ZP_07825277.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
345-E]
gi|313119948|gb|EFR43133.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
345-E]
Length = 445
Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
R +K+ C YC FC + L S+ E A+ I++ + EV+ TG
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + + L ++ L I ++ +R S ++ ++ ELI +K K
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262
Query: 207 VYIAIH 212
V +H
Sbjct: 263 VCHHLH 268
>gi|197118653|ref|YP_002139080.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
gi|197088013|gb|ACH39284.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
Length = 326
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 62/237 (26%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + CR+C E V VLS D ++ + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNLRCRYCMPEEGVEKLDHSQVLSYADLLR-ISTEAVAAGIEKIRVTGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
K + L+ L + ++ L + + E+ Q L+EAG + I++
Sbjct: 74 -RKGIISFLERLGALPGLKELVLTTNGL------LLKEMAQGLREAGVQRLNISL----- 121
Query: 217 YEFSEEAIAAISR---LAN----------AG-----IILLSQSVLLKGINDDPEIL--AN 256
E AAI+R L AG I + V+++G+NDD EIL
Sbjct: 122 DSLKPETFAAITRGGELKRVLDGLEAAEKAGFPPHKINV----VVMRGVNDD-EILDFVE 176
Query: 257 LMRTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQKIV--ASLKEKIS 302
L +PY Y+ G + +R + E ++ + L E++S
Sbjct: 177 LTMK------RPYAVRFIEYM----PTCGDADWRELCVPGAEIRERIGERYLIEEVS 223
>gi|323692019|ref|ZP_08106267.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673]
gi|323503942|gb|EGB19756.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673]
Length = 450
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 82 LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
K + +++K L I + S ++CL +H
Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ +A+ I L A I + Q VL K +ND E+ ++
Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206
>gi|258514903|ref|YP_003191125.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778608|gb|ACV62502.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 358
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 39/154 (25%)
Query: 90 VHRYPDRILLKL-------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+P+R + + +VC CRFC Q + I E
Sbjct: 46 QRLHPERQVTFVIDRNINYTNVCLSRCRFC---AFYRDQNAPDAYIIGWQELYEKIAETV 102
Query: 143 QI--WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E++ GG + L L LRYIK + HS P PE++ +
Sbjct: 103 DAGGTELLIQGG---LHPDLTLDYYLDMLRYIKSNFDIHIHSFSP--------PEVMHMV 151
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
K +G + + +L AG
Sbjct: 152 KGSGLSI----------------KEVLEKLRAAG 169
>gi|302874736|ref|YP_003843369.1| hypothetical protein Clocel_1861 [Clostridium cellulovorans 743B]
gi|307690649|ref|ZP_07633095.1| hypothetical protein Ccel74_21016 [Clostridium cellulovorans 743B]
gi|302577593|gb|ADL51605.1| protein of unknown function DUF512 [Clostridium cellulovorans 743B]
Length = 443
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q + T + +
Sbjct: 86 SCHNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FITLT-----NMKDDDID 135
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216
++++ RI+ P+ +++H +P
Sbjct: 136 RIIR----------------------YRIS------------PINVSVHTTNPELRREML 161
Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
F+ E + + +LA+AGI + +Q VL IN+ E++
Sbjct: 162 NNRFAGELMEKLKKLADAGITINTQIVLCPEINNGEELVRT 202
>gi|162451211|ref|YP_001613578.1| hypothetical protein sce2939 [Sorangium cellulosum 'So ce 56']
gi|161161793|emb|CAN93098.1| moaA3 [Sorangium cellulosum 'So ce 56']
Length = 373
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 42/241 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + + + C C +C G L + ++ + I V TGG+
Sbjct: 58 PRSVRISVTDRCDFACTYCRPSRHDG-YADGKLMTAAWRTMFEALR-DAGIRRVRLTGGE 115
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + ++ L + + + ++ + ++I
Sbjct: 116 PLLHP--EIVSIVGCLAALGFEDL------ALTTNASQLARLAGALRAAGLHRLNVSIDT 167
Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
P F E I AG + +V+L+G+NDD L E
Sbjct: 168 LDPGRFGEMTRGGELARVLDGIDAAIAAGFSPIKLNTVVLRGVNDDEIERLALWA--WER 225
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV-------ASLKEKISGLCQPFYILDLPGGY 317
R+ P + I EG ++V A ++ +++ P +
Sbjct: 226 RMVP--RFLEVM---------PIAEGARLVGKHLVTAAEMRARLAEHLLPE---EAAAEP 271
Query: 318 G 318
G
Sbjct: 272 G 272
>gi|283954557|ref|ZP_06372076.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793961|gb|EFC32711.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
jejuni 414]
Length = 417
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + T+L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKTLLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L EA
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDEAWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|310826527|ref|YP_003958884.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
gi|308738261|gb|ADO35921.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
Length = 435
Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 15/146 (10%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS 128
D + ++++ L + R LK+ C +C +C R + VLS
Sbjct: 123 FVSDIMREHHYEDLNITETKGKTRAFLKVQEGCNQFCTYCIVPFARGPVRSRPVDAVLSE 182
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIV 187
AA Y + + G D L L +++ + ++ V+ +R S +
Sbjct: 183 VKRVAAHGYAEVVLTGIHIASYGVD---LGDGVDLLSLIRAVDKVEGVKRIRLGS----L 235
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHA 213
+P + E +Q L E H
Sbjct: 236 EPLLLTEEFVQGLSEVR---AFCPHF 258
>gi|227872811|ref|ZP_03991125.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
gi|227841338|gb|EEJ51654.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
Length = 478
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 32/168 (19%)
Query: 66 ELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E + P E P+ + + L + R +K+ C +C +C +G
Sbjct: 124 ENDASPMEPFSPVREEGEYENLFLSKPKDKSRAFVKVQDGCNQFCAYCIIPY----VRGR 179
Query: 125 VLSSKDTEAALAYIQ--EKSQIWEVIFTGG-------DPLILSHKR----------LQKV 165
+ S K+ E L I+ K EV+ TG D LS++ L +
Sbjct: 180 IRSRKE-EDCLEEIRHLAKEGFQEVVLTGIHLSSYGLDFENLSYEYASRKAETGEALLHL 238
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + I +Q +R S ++P+ I + LKE I H
Sbjct: 239 ISEVGKIPGIQRIRLGS----LEPRIITERFLAGLKEVE---AICPHF 279
>gi|228474586|ref|ZP_04059317.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
SK119]
gi|228271249|gb|EEK12617.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
SK119]
Length = 340
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ + +A + + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ L K+++ L I+ ++ + + LK+ G+ +Y
Sbjct: 77 PLLRRD--LYKLIEKLNRIEGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + +E AI+ +L Q V+ KGINDD
Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175
>gi|123485105|ref|XP_001324419.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
gi|121907301|gb|EAY12196.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
Length = 296
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + L C +C+FCF R G + + L ++ + I + + + F GG+P
Sbjct: 6 TVNIHYLRSCNYHCKFCFHR---GIENSSTLKLEEWHKIIDTIAKSGLVKRINFAGGEPF 62
Query: 156 ILSHKRLQKV 165
+L + +
Sbjct: 63 MLRKHIVDLI 72
>gi|162453511|ref|YP_001615878.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
gi|161164093|emb|CAN95398.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
Length = 423
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 18/156 (11%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P + E R D + + R +L + + C C FCF + +
Sbjct: 116 VPTRHEEITAEAFRLD-----DAGLIDWAQCRPRSISVLPVANACQARCAFCFSKA--SA 168
Query: 121 QKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
S E L + + + VI GG+P +L +RL+ +++ L +
Sbjct: 169 SDLARQQSATLERYLDWARRAKERGAERAVITGGGEPTLLEPERLRALVRGLSEL----- 223
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH 212
F + I + R++ ++ L++AG + ++ H
Sbjct: 224 --FPKSLLITNGARLDLAQVEELRDAGLTTLAVSRH 257
>gi|78187401|ref|YP_375444.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
gi|78167303|gb|ABB24401.1| GTP cyclohydrolase subunit MoaA [Chlorobium luteolum DSM 273]
Length = 339
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 24/179 (13%)
Query: 86 LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+ + R+ RI + L +C + C +C R E ++S + A + +
Sbjct: 8 IPQLEDRFQRRITYARIALTRLCNLRCSYCMREEHESGTAAAMMSFSEVTAIIRALAAM- 66
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I +V TGG+PL+ + + ++ + ++ + + + + L E
Sbjct: 67 GIKKVRLTGGEPLLRND--ISDIVLAAKQTPGIEKVTLTTNG------LLLDRHLDRLLE 118
Query: 203 AGKPVYIAIHANH--PYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
AG I I + P + A A + RL G + + V+L+G+NDD
Sbjct: 119 AGID-AINISIDSLQPKRYQAIARRDEYSRVKANLDRLIGIGTVPVKINVVMLRGVNDD 176
>gi|260911507|ref|ZP_05918095.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
gi|260634371|gb|EEX52473.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
Length = 446
Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 42/218 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C S + A E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSISSLVQQAQD--AANEGGKEIVLTGVN 209
Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
++R ++K L ++ +Q R S ++P + ELI +
Sbjct: 210 IGEFKGEGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCATSR---AFM 262
Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ-----------SVLLKG-----IN 248
H + P S+E + + R L + L+ Q V +G
Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVGSRGEEPAYFE 322
Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
D L +L +L + PY GT+ R+
Sbjct: 323 DCYNFLKSL--DISQLHVFPYS-----ERPGTAALRIP 353
>gi|260437149|ref|ZP_05790965.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
2876]
gi|292810461|gb|EFF69666.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
2876]
Length = 439
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
LK+ C +C +C + G+ + + + Y+ + ++ E+ G
Sbjct: 147 LKIAEGCDKHCTYCSIPMIRGAYR--SVPMDELVKEAEYLADNGVKELIIVAQEITVYGK 204
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D + K+L ++L L I +Q +R P+ I ELI+ ++ K YI +
Sbjct: 205 D--LYGEKKLPELLHRLCKIPGIQWIRL----LYCYPEEITDELIETIRTEKKICHYIDM 258
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLS 239
H S++ + A+ R + L +
Sbjct: 259 PIQHA---SDKILKAMGR-RTNNVELRN 282
>gi|257062817|ref|YP_003142489.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256790470|gb|ACV21140.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 321
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 99 LKLLHVCPVY-CRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
L + CP C FC F + M + + +D EA LA + E I G G+PL
Sbjct: 19 LPVAKGCPYNKCAFCDFYKHMTYRE----IPLEDIEAELARVSNAGGKPERIMLGDGNPL 74
Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI----- 209
L RL+K+++ + + + L + V ++ + + + L G +
Sbjct: 75 WLPFDRLKKIVEMIEHYLPSCTTLCSDASVLAIESK--TDDELAWLARHGYRMAYVGIES 132
Query: 210 ----AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL-------KGINDDPEILANLM 258
+ +++A I+RL AGI + ++ +GI + A L+
Sbjct: 133 GLDDVLEFMDKDHLNDQAREQIARLHKAGIDFGAH--IITGAAGNGRGIE-NARATAALI 189
Query: 259 RTFVELRIKPYYLHHPDL---AAGTSHFRLTIEEG-------QKIVASLKEKIS 302
+P +H D A + L E+G + + ++E +S
Sbjct: 190 NEL-----RP--VHICDFSLYVASVTELGLKEEDGEFVRASMLENMREMREFVS 236
>gi|40063022|gb|AAR37878.1| molybdenum cofactor biosynthesis protein A [uncultured marine
bacterium 560]
Length = 331
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 20/162 (12%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C +C + + VLS ++ + E + +V TGG+PL L
Sbjct: 17 VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVRLFAE-LGVTKVRLTGGEPL-L 74
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
L + + L I + + +P+ + P LK G V I+I + P
Sbjct: 75 RRDILD-LTRMLGDIPGL------TEIPLSTNAHLLPSFAGKLKNHGINRVNISIDSLIP 127
Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249
E + + I I AG+ + V++KGIND
Sbjct: 128 ERFKEITRDGDLAKVIKGIDAAIAAGMSPVKLNMVVMKGIND 169
>gi|170702587|ref|ZP_02893460.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
gi|170132498|gb|EDT00953.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
Length = 372
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 61/248 (24%)
Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
PL + P R L L ++ C C +C R+ G + SS+ A L I
Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88
Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
+ ++ TGG+PL+ + L +++ L + V + LR
Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLGALIERLATLTTVDGKPVEIALTTNGSLLAAKARSLR 146
Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
SRV + I+ + + + +A PV + A I AG
Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192
Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
+ +V+ +G NDD + L+R F + Y G S + +
Sbjct: 193 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245
Query: 289 EGQKIVAS 296
++++ +
Sbjct: 246 RMRELIEA 253
>gi|297584652|ref|YP_003700432.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
MLS10]
gi|297143109|gb|ADH99866.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
MLS10]
Length = 441
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + A ++ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EDVLSQANQLVEA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L +L+ L I+ ++ +R S ++ +I E+I+ + + K
Sbjct: 199 TGGYGED---MKDYNLAGLLRDLETIEGLRRIRISS----IEASQITDEVIEVINRSDK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVNHLHI 257
>gi|118602689|ref|YP_903904.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567628|gb|ABL02433.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 331
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + C C +C R ++ +LS +D E + + I +V TGG+PL+
Sbjct: 17 LSVTEHCNYRCFYC-RDDEHKPNCKRKDILSYEDIEKIVQLFAQ-LGITKVRLTGGEPLL 74
Query: 157 LS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
++ K++ + I V P+ + + + L + G V I+I +
Sbjct: 75 RRGISKIAKLVSRIDGIDDV---------PLSTNAHLLEKFAKKLYQNGINRVNISIDSL 125
Query: 215 HPY---EFSE-----EAIAAISRLANAG-IILLSQSVLLKGINDD 250
P E + + I G + V ++G+NDD
Sbjct: 126 IPKRFEEITHGGDLIQVTKGIDAAIQTGMAPIKINVVTMRGVNDD 170
>gi|50843535|ref|YP_056762.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Propionibacterium acnes KPA171202]
gi|50841137|gb|AAT83804.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Propionibacterium acnes KPA171202]
Length = 426
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 45/208 (21%)
Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P ++ ++ C + C+ C + Q + +Y + + I
Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELINQLTSYERPYPML---IL 101
Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD L +++ + HV I P V P + ++ ++EAG +
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSIM 152
Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
H +H + A L G+ +V K I++
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205
Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
P++L N ++L +Y
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229
>gi|300854432|ref|YP_003779416.1| hypothetical protein CLJU_c12460 [Clostridium ljungdahlii DSM
13528]
gi|300434547|gb|ADK14314.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 444
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 58/205 (28%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
E+ E D + + G+ P ++ C C FCF +M + T+
Sbjct: 51 EIEKQSGEVWDLEIEKEYDEELGLEFEEP---IIDKPKSCHNKCIFCFIDQMPKGMRDTL 107
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
D ++ LA++Q V T ++ + + +++K
Sbjct: 108 YFKDD-DSRLAFLQGN----FVTLT-----NMNDEEIDRIIK------------------ 139
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIIL 237
RI+ P+ +++H +P +F+ + RL GI +
Sbjct: 140 ----YRIS------------PINVSVHTTNPDLRIKMINNKFAGNIYTLLKRLTQNGIKI 183
Query: 238 LSQSVLLKGINDDPE---ILANLMR 259
Q VL GIND E + +L R
Sbjct: 184 NCQIVLCPGINDGAEFKRTVEDLYR 208
>gi|319400912|gb|EFV89131.1| RNA modification enzyme, MiaB family protein [Staphylococcus
epidermidis FRI909]
Length = 448
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|288927648|ref|ZP_06421495.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330482|gb|EFC69066.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 446
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 19/156 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C + + A E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSIASLVQQAHD--AANDGGKEIVLTGVN 209
Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
++R ++K L ++ +Q R S ++P + ELI +
Sbjct: 210 IGEFKGGGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCASSR---AFM 262
Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ 240
H + P S+E + + R L + L+ Q
Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQ 298
>gi|311067471|ref|YP_003972394.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
gi|310867988|gb|ADP31463.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
Length = 500
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
I D + + + + + + CP C +C F + Q G V S +
Sbjct: 154 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHFEI 213
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ +++ ++ + F GG P ++ + + + + + R V+ +R + V P
Sbjct: 214 QKIGEWLKRHEIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKQIREIT-VEAGRP 272
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + L + + I P + E + AI R
Sbjct: 273 DTITEEKLDVLNKYHIDRISIN-----PQSYENETLKAIGR 308
>gi|262369704|ref|ZP_06063032.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
gi|262315772|gb|EEY96811.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
Length = 339
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +K +LS ++ ++ + I ++ TGG+PL+
Sbjct: 23 ISVTDRCNFKCVYCMPEHPEWMKKHDLLSFEELYHFCKFMVQH-GIEQIRITGGEPLM-- 79
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI------ 211
+ + ++ L+ +K + R + + LK+AG + I++
Sbjct: 80 RQGVVHFIEQLQSLKKQGLKRIS----MTTNGHYLKQYAAALKQAGLDDLNISLDSLDAE 135
Query: 212 HANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + + I G + +VL+KGINDD
Sbjct: 136 QFQHLTKKQLHT-VLEGIQVAQQVGFNIKINTVLMKGINDD 175
>gi|239637612|ref|ZP_04678584.1| conserved hypothetical protein [Staphylococcus warneri L37603]
gi|239596830|gb|EEQ79355.1| conserved hypothetical protein [Staphylococcus warneri L37603]
Length = 448
Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L + ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250
Query: 207 VYIAIHA 213
+ +H
Sbjct: 251 IVRHLHV 257
>gi|330686099|gb|EGG97720.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU121]
Length = 448
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + + E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L + ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250
Query: 207 VYIAIHA 213
+ +H
Sbjct: 251 IVRHLHV 257
>gi|89895872|ref|YP_519359.1| hypothetical protein DSY3126 [Desulfitobacterium hafniense Y51]
gi|89335320|dbj|BAE84915.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 441
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141
L I R LK+ C +C +C G + + + TEA A Y
Sbjct: 144 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 199
Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
E++ T G D + L +++K L IK + LR S ++P P
Sbjct: 200 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 250
Query: 195 ELIQCLKEAGKPVYIAIHA 213
ELI + V +H
Sbjct: 251 ELIDVIINYP-AVCPHLHI 268
>gi|163942456|ref|YP_001647340.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
gi|163864653|gb|ABY45712.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
Length = 337
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K+++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 175
>gi|219670301|ref|YP_002460736.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
DCB-2]
gi|219540561|gb|ACL22300.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
DCB-2]
Length = 439
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141
L I R LK+ C +C +C G + + + TEA A Y
Sbjct: 142 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 197
Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
E++ T G D + L +++K L IK + LR S ++P P
Sbjct: 198 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 248
Query: 195 ELIQCLKEAGKPVYIAIHA 213
ELI + V +H
Sbjct: 249 ELIDVIINYP-AVCPHLHI 266
>gi|296133939|ref|YP_003641186.1| RNA modification enzyme, MiaB family [Thermincola sp. JR]
gi|296032517|gb|ADG83285.1| RNA modification enzyme, MiaB family [Thermincola potens JR]
Length = 445
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TE 132
+D + L + + R LK+ C +C +C + ++ +D
Sbjct: 123 KDIMQAREFEELPVLDYESRTRAFLKIQEGCNNFCTYCI---IPYARGPVRSRKRDNVIT 179
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIV 187
A + E E++ TG R L ++ L IK ++ LR S V
Sbjct: 180 EAERLVGE--GFREIVLTGIHIGAYGRDRDDGYDLAALVADLARIKGLRRLRLGS----V 233
Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212
+P+ + P LI + + + +H
Sbjct: 234 EPEDVTPHLIATMADNRV-ICRHLH 257
>gi|242242851|ref|ZP_04797296.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144]
gi|242233693|gb|EES36005.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144]
Length = 451
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253
Query: 207 VYIAIHA 213
V +H
Sbjct: 254 VVRHLHI 260
>gi|30263518|ref|NP_845895.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47528911|ref|YP_020260.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49186368|ref|YP_029620.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|65320845|ref|ZP_00393804.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
anthracis str. A2012]
gi|165871039|ref|ZP_02215690.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0488]
gi|167636277|ref|ZP_02394579.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|167640544|ref|ZP_02398806.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|170688439|ref|ZP_02879647.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|170708165|ref|ZP_02898612.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|177652522|ref|ZP_02934989.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|190564908|ref|ZP_03017829.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
Tsiankovskii-I]
gi|227813602|ref|YP_002813611.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CDC 684]
gi|229603477|ref|YP_002867763.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
gi|254686135|ref|ZP_05149994.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254723532|ref|ZP_05185320.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254738607|ref|ZP_05196310.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
gi|254744833|ref|ZP_05202511.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|254752925|ref|ZP_05204961.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Vollum]
gi|254759197|ref|ZP_05211223.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Australia 94]
gi|254811535|sp|C3LA56|MOAA_BACAC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|30258153|gb|AAP27381.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47504059|gb|AAT32735.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49180295|gb|AAT55671.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|164713250|gb|EDR18776.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0488]
gi|167511412|gb|EDR86796.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|167528300|gb|EDR91072.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170126973|gb|EDS95853.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|170667609|gb|EDT18364.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|172082196|gb|EDT67263.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|190564225|gb|EDV18189.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
Tsiankovskii-I]
gi|227006379|gb|ACP16122.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CDC 684]
gi|229267885|gb|ACQ49522.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
Length = 338
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L + V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKVDGVEDI 99
>gi|251810993|ref|ZP_04825466.1| 2-methylthioadenine synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|293366463|ref|ZP_06613140.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)]
gi|251805503|gb|EES58160.1| 2-methylthioadenine synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|291319232|gb|EFE59601.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)]
Length = 451
Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253
Query: 207 VYIAIHA 213
V +H
Sbjct: 254 VVRHLHI 260
>gi|295094897|emb|CBK83988.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus sp.
ART55/1]
Length = 436
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF + + T+ D ++ L+++Q + T +
Sbjct: 80 LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
K + +++ L I + H+ P L+ +
Sbjct: 130 KEKDIDRIINYHLAPI----NISVHTTNP-------------KLRCSMLN---------- 162
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ + I + AGI + Q VL KGIND E+ +
Sbjct: 163 NRFAGAILDYIRKFYEAGIPMNGQIVLCKGINDGEELWRTIS 204
>gi|294013183|ref|YP_003546643.1| putative radical SAM [Sphingobium japonicum UT26S]
gi|292676513|dbj|BAI98031.1| putative radical SAM [Sphingobium japonicum UT26S]
Length = 382
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIW----EV 147
D +LLK+ C + C +C+ M + +S +A + ++ + V
Sbjct: 12 DTVLLKVASRCNLDCSYCYVYHMGDNAWRDQPKQMSDAVLDAVARRLADQYALQAVPFSV 71
Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
+ GG+PL+L +L++ LR + H + +
Sbjct: 72 VLHGGEPLLLGVAKLERFCAKLRDALPHPCGIHIQT 107
>gi|260589077|ref|ZP_05854990.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|331082507|ref|ZP_08331632.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540497|gb|EEX21066.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|330400485|gb|EGG80115.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
6_1_63FAA]
Length = 434
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 21/127 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C V + + + E L K+ E + TG
Sbjct: 143 HTRAYLKVQDGCNQFCSYCII-PYVRGRVRSRRKEEVLEEVLR--LTKNGYQEFVLTGIH 199
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L +++K + I+ V+ +R S ++P+ I E Q L K
Sbjct: 200 LSSYGVDC----EDNLLELIKAVHEIEGVKRIRLGS----LEPRIITEEFAQALGNMPK- 250
Query: 207 VYIAIHA 213
I H
Sbjct: 251 --ICPHF 255
>gi|117924506|ref|YP_865123.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
MC-1]
gi|117608262|gb|ABK43717.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
MC-1]
Length = 464
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 69/214 (32%), Gaps = 49/214 (22%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
++ P +D H+Y R+ L + C + C +C R+ G
Sbjct: 14 VDTHPCFSKDA------------HHKYA-RMHLAVAPACNIQCNYCNRKYDCANESRPGV 60
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + E A + Q+ V G GDPL + + + +Q+
Sbjct: 61 VSELLTPQQAVEKVRAVKAKIPQLTVVGIAGPGDPLANPARTFETCERIAAEFPELQLC- 119
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--------------HANHPYEFSEEAIA 225
+ PQ + E I+ L + I H N + A
Sbjct: 120 LSTNGL-TLPQHV--ERIKALNVHHVTITINALDPEVGAKVYPWIFHNN--RRIRGKKAA 174
Query: 226 AI---------SRLANAGIILLSQSVLLKGINDD 250
AI L G+++ SV++ G+N+D
Sbjct: 175 AILIRNQFKGLEMLVERGVLVKVNSVMIPGMNED 208
>gi|295707098|ref|YP_003600173.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
319]
gi|294804757|gb|ADF41823.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
319]
Length = 338
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C CR+C E+ G+ +LS + E + +V TGG+
Sbjct: 18 LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTRLFAS-LGVKKVRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
PL+ K L ++ L+ I+ + + +
Sbjct: 77 PLL--RKGLPDLINRLKQIEGIDDIAITT 103
>gi|189425003|ref|YP_001952180.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189421262|gb|ACD95660.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 374
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 28/160 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKS-QIWEVIFTGGDPLI 156
CP C FC + M+ + +V S++ E ++ + EV F GG
Sbjct: 9 FIPHAGCPHTCLFCNQ-HMISGAQQSVPSARQISETVQQWLGRSPNRAAEVAFYGG-SFT 66
Query: 157 LSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
L ++ L + ++ L + ++ +R +R P ++ ++ L
Sbjct: 67 LLPRKQQEQLLEAVQPLLEQQKIRNIRISTR-----PDALDEAVLAFLAGHKVTTIEVGV 121
Query: 209 ------IAIHAN--HPYEFSEEAIAAISRLANAGIILLSQ 240
+ + +N H + +++AAI R+ +AG + +Q
Sbjct: 122 QSLDDLVLLQSNRGHT---AADSMAAIQRVRSAGFQVGAQ 158
>gi|27468181|ref|NP_764818.1| hypothetical protein SE1263 [Staphylococcus epidermidis ATCC 12228]
gi|57867026|ref|YP_188720.1| hypothetical protein SERP1144 [Staphylococcus epidermidis RP62A]
gi|282875998|ref|ZP_06284865.1| MiaB-like protein [Staphylococcus epidermidis SK135]
gi|27315727|gb|AAO04862.1|AE016748_96 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637684|gb|AAW54472.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
gi|281295023|gb|EFA87550.1| MiaB-like protein [Staphylococcus epidermidis SK135]
gi|329735363|gb|EGG71655.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU045]
gi|329737126|gb|EGG73380.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU028]
Length = 448
Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|222151807|ref|YP_002560965.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
gi|222120934|dbj|BAH18269.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
Length = 489
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 20/168 (11%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--- 129
E D I + L + + + + CP C +C +
Sbjct: 139 ELMDRITKTQLNALPDLYELEQEVSIYIGIPFCPTKCAYCTFPAYAIQVHKNDVPEFLVG 198
Query: 130 ---DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHS 182
+ E +++ ++ + F GG P +S + L+ +L+ + + HV+ L
Sbjct: 199 LLYEIEHIGEWLKAHDIKVTSIYFGGGTPTSISAQDLKLLLEAVYTHFDMTHVRELT--- 255
Query: 183 RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
V P I+ ++ L + I P F++E + AI R
Sbjct: 256 -VEAGRPDTIDEATLEVLNSFDINRISIN-----PQSFTDETLKAIGR 297
>gi|42782634|ref|NP_979881.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
gi|42738560|gb|AAS42489.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
Length = 338
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C E+ G +LS + E I + ++ TGG+
Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ L I V+ +
Sbjct: 77 PLL--RRGLPQLIERLNKINGVEDI 99
>gi|326942510|gb|AEA18406.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 337
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175
>gi|166031237|ref|ZP_02234066.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
27755]
gi|166029084|gb|EDR47841.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
27755]
Length = 428
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 19/147 (12%)
Query: 73 EREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + + ++ + H R +K+ C +C +C + + S++
Sbjct: 121 ELLDINHEKEYEEMQ-VTHTAEHTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRNL 174
Query: 132 EAALAYIQ--EKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E L ++ S EV+ TG I + + L ++++ + I ++ +R S
Sbjct: 175 EHVLEEVRTLAASGYKEVVLTGIHLSSYGIDTGESLLELIQKVHEIDGIKRIRLGS---- 230
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
++P+ I E + K + H
Sbjct: 231 LEPRIITEEFASSIAALPK---MCPHF 254
>gi|87310113|ref|ZP_01092245.1| probable MiaB protein-putative tRNA-thiotransferase
[Blastopirellula marina DSM 3645]
gi|87287103|gb|EAQ79005.1| probable MiaB protein-putative tRNA-thiotransferase
[Blastopirellula marina DSM 3645]
Length = 475
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 21/141 (14%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E DP+ D P + +++ C +C +C + G ++G +D
Sbjct: 143 HESFDPLRDPEMRPTPF-------QAYVRIQIGCDKFCTYCIVPSVRGPEQGRRP--EDI 193
Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
A ++ ++ + + G D S L +L + I ++ + +
Sbjct: 194 LAETRHLADQGTVEITLVGQTVNSYRGQDAAGKSW-NLADLLAAIHEIDGIRRI----KF 248
Query: 185 PIVDPQRINPELIQCLKEAGK 205
P+ + EL+ ++E K
Sbjct: 249 VTNYPKDMTDELLTAVRELDK 269
>gi|24212660|sp|O57854|MOAA_PYRHO RecName: Full=Probable molybdenum cofactor biosynthesis protein A
Length = 310
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + C +C R + ++ ++ E + + + I +V TGG+P I
Sbjct: 15 ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 71
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204
+ ++++ L+ +V L + + + L + LKEAG
Sbjct: 72 D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 118
Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
K + N +E I I + + V++KG+NDD + ++MR
Sbjct: 119 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 169
>gi|188586121|ref|YP_001917666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|229890572|sp|B2A3X6|MIAB_NATTJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|179350808|gb|ACB85078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 451
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 23/163 (14%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMV 118
PQ E + +R I ++ + + H+ D + + + + C YC++C +
Sbjct: 119 FPQLLEHVMQKGKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVR 178
Query: 119 GSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLR 170
G Q+ + E K + E+ G + + K L + +L+ L
Sbjct: 179 GQQRSRDPEHIKYEVEKL-----AKEGLKEITLLGQN-VNSYGKDLDQNISFTNLLEELS 232
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
I+ ++ +RF + P+ + ELI LKE+ K I H
Sbjct: 233 KIEGIERIRFMTSH----PKDFDKELITTLKESNK---ICEHF 268
>gi|189346211|ref|YP_001942740.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola
DSM 245]
gi|189340358|gb|ACD89761.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola
DSM 245]
Length = 424
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 45/212 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
RI L + C + C +C R+ ++ ++SK AL Y+Q+ I V
Sbjct: 20 GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPRQALYYLQQAMEISPNIAVVG 79
Query: 149 FTG-GDPLILSHKRLQKV------------------LKTLRYIK--------HVQILRFH 181
G GDP + ++ + L + +I HV + +
Sbjct: 80 IAGPGDPFANPDETMETLRLVREHYPEMLLCVATNGLDLMPWIDELAELQVSHV-TITIN 138
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+DP+ + E+ ++ K + + A+ RL G+ S
Sbjct: 139 ----AIDPE-VGSEIYAWVRHKKK---MYRDIEAAKLLIGNQLEALKRLKEVGVTAKVNS 190
Query: 242 VLLKGINDD--PEILANLMRTFVEL-RIKPYY 270
+++ GIND ++ + ++ PYY
Sbjct: 191 IIIPGINDGHVIDVARKVSELGADILNCLPYY 222
>gi|224418140|ref|ZP_03656146.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|253827467|ref|ZP_04870352.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|313141675|ref|ZP_07803868.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
gi|253510873|gb|EES89532.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
98-5491]
gi|313130706|gb|EFR48323.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
Length = 423
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G K + + + E I TG +
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFEKNKIINQITKLTQN-GFSEFILTGTN 189
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206
S++ L +L+++ I V+ LR S ++P +I + + L E
Sbjct: 190 MGSWGKDSNENLTSLLESICAIPEVKRLRLGS----LEPSQITQDFLDFLDHPKIERHLH 245
Query: 207 VYI 209
+ +
Sbjct: 246 IAL 248
>gi|220929547|ref|YP_002506456.1| hypothetical protein Ccel_2132 [Clostridium cellulolyticum H10]
gi|219999875|gb|ACL76476.1| protein of unknown function DUF512 [Clostridium cellulolyticum H10]
Length = 438
Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 83/246 (33%)
Query: 41 PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
L+ P+ I E+ + +E E+ + S + G
Sbjct: 42 RYYQASEELLLEIEKPDGEIW--------EIEVEKDENEELGLEFEDSLIDG-------- 85
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
C C FCF ++ + TV Y ++ + F G+ +
Sbjct: 86 -----AKSCTNKCIFCFIDQLPKGMRETV-----------YFKDDDS--RLSFLTGNYVT 127
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L++ ++K + L I H R++ P+ +++H +P
Sbjct: 128 LTN--IKK--EELERIIH---------------YRMS------------PINVSVHTTNP 156
Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262
F+ + + I L + GI + Q VL + IND ++L+ L +
Sbjct: 157 DLRKFMLGNRFAGDVMNKIRMLTDNGIEVNCQIVLCRDINDGNELDKTIDVLSELYPSIN 216
Query: 263 ELRIKP 268
+ I P
Sbjct: 217 SVSIVP 222
>gi|257467388|ref|ZP_05631699.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918518|ref|ZP_07914758.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
gi|313692393|gb|EFS29228.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
Length = 436
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 13/139 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +C +C G + ++ + L ++ +I + G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202
Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
D + + +++ + ++ +R S V P RI I K +
Sbjct: 203 DYGKDLEGDTSFETLVQEILKRDSLKRVRIGS----VYPDRITDSFISLFKNP--KMMPH 256
Query: 211 IHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 LHIS-LQSCDDTVLRNMKR 274
>gi|317063767|ref|ZP_07928252.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
gi|313689443|gb|EFS26278.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
Length = 474
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + L+ ++ + +++ + G DPL S
Sbjct: 92 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 151
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
L +L+ ++ I ++ R V+ E + LKE KP
Sbjct: 152 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 208
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
Y +H N P E A+ R AGI
Sbjct: 209 TYERVHLNGPKRDYEYHTTAMFRAREAGI 237
>gi|56419300|ref|YP_146618.1| hypothetical protein GK0765 [Geobacillus kaustophilus HTA426]
gi|56379142|dbj|BAD75050.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 372
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L K I + LR S P P + E I+ KE G +
Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116
Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261
I H + I AI L I + +V+ + N + +A L+
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIHYLHELDIPVQINTVISRY-NVHVLDEMAELVEKL 175
>gi|291301726|ref|YP_003513004.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
DSM 44728]
gi|290570946|gb|ADD43911.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
DSM 44728]
Length = 479
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 41/210 (19%)
Query: 47 INPHNPNDPIARQFIP-----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR----- 96
I H P D R +P ++E ++P D + + + H R
Sbjct: 126 IASHTPTD--RRTLLPISPVKRREATAVIPGHAA---PDTDDTAMP--AHLKVMRRRLTS 178
Query: 97 ---ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
LK+ C C FC FR V G +L+ A ++
Sbjct: 179 GPVANLKIASGCDRRCAFCAIPSFRGAFVSRDPGEILAEAQWLAEQGVVEVTLVSENTTS 238
Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEA-GKP 206
G D LS L+K+L L + ++ +R P + P L++ + G
Sbjct: 239 YGKD---LSDAAALEKLLPQLAAVDGIERVR-----VSYLQPAELRPSLVETIATTPGVA 290
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII 236
Y + H + + R+ G
Sbjct: 291 PYFDLSFQH------SSRDLLRRMRRFGST 314
>gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
Y412MC10]
Length = 334
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E M ++S ++ + + + + +
Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPM-GVSK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V TGG+PL+ L+ ++ + I+ VQ + + + P + LKEAG
Sbjct: 66 VRLTGGEPLVRKD--LETLVHQIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117
Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
I I + E + + + I AG+ + VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171
>gi|304382742|ref|ZP_07365233.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973]
gi|327313870|ref|YP_004329307.1| radical SAM domain-containing protein [Prevotella denticola F0289]
gi|304336137|gb|EFM02382.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973]
gi|326944612|gb|AEA20497.1| radical SAM domain protein [Prevotella denticola F0289]
Length = 451
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 23/150 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
+ C C +CF +++ +S E + +I+ + + T GG+PL+
Sbjct: 107 IAPTSDCNFNCPYCFEE----NKRPIRMSDAVIENIILFIKRYKHLEYLYITWYGGEPLM 162
Query: 157 LSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
++K+L + I +++ + + IN +++ + + I + N
Sbjct: 163 AID-IIEKILNRISIEIPNIK---ISHHFLVTNGYLINEKMLSLFSKYPLNSIQITLDGN 218
Query: 215 HPYEFSEEAIAAISRLANAGI-----ILLS 239
P + +L +G+ I+ +
Sbjct: 219 KPR------HDNLRKLKKSGLGTFDKIVRN 242
>gi|163816750|ref|ZP_02208113.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
gi|158448007|gb|EDP25002.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
Length = 450
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 21/152 (13%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + + + G V R +K+ C +C +C + + S+
Sbjct: 134 EYFIDISKETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSE 188
Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
EA +A + E ++ I EV+ TG D + L ++ + IK ++ +R S
Sbjct: 189 EAVIAEVTELAESGIKEVVLTGIHISSYGKD--KNNEGALIDLIDAISKIKGIKRIRLGS 246
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++P I + ++ + A K V H +
Sbjct: 247 ----LEPGIITEDFVRRVS-ANKKVCPHFHLS 273
>gi|311029133|ref|ZP_07707223.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus sp. m3-13]
Length = 374
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L E + ++E ++ + TGG+P +
Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPKALP---IELLIQRLEEIPRLRSISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S K + + + L H + +R +IN L L K P +H +
Sbjct: 89 MSMKSVNEYVVPLLKYAHERGVR----------TQINSNLTLDLARYEKIIPYLDVLHIS 138
Query: 215 H 215
H
Sbjct: 139 H 139
>gi|229132987|ref|ZP_04261829.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
gi|228650484|gb|EEL06477.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
Length = 337
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARALKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|14590060|ref|NP_142124.1| molybdenum cofactor biosynthesis protein A [Pyrococcus horikoshii
OT3]
gi|3256500|dbj|BAA29183.1| 316aa long hypothetical molybdenum cofactor biosynthesis protein
[Pyrococcus horikoshii OT3]
Length = 316
Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + C +C R + ++ ++ E + + + I +V TGG+P I
Sbjct: 21 ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 77
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204
+ ++++ L+ +V L + + + L + LKEAG
Sbjct: 78 D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 124
Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
K + N +E I I + + V++KG+NDD + ++MR
Sbjct: 125 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 175
>gi|257440231|ref|ZP_05615986.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
A2-165]
gi|257197265|gb|EEU95549.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
A2-165]
Length = 441
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C +C R + ++ A + E+I
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVAEARWLAG-------EGVKELIVVAQ 198
Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DP + ++L L + ++ +R P+RI + I +K K V
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDDFIAAMKRNEKVV 254
Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
Y+ + H E + I +L GI L + L+ G
Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRREIPGITLR--TTLIAG 304
>gi|328948729|ref|YP_004366066.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
2489]
gi|328449053|gb|AEB14769.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
2489]
Length = 482
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 14/128 (10%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
R LK+ C C FC R ++ K E A E E++ TG
Sbjct: 175 KHSRATLKIQDGCNNSCSFC-RIHFARGTSVSLEPEKILERAKE--IENLGSSEIVLTGV 231
Query: 153 D----PLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ + + + +L L + + ++F R+ PQ I EL L +
Sbjct: 232 NLSQYAGMSKDGAIFDFKDLLSFLLS--NTKKVKF--RISSFYPQHITKELCAVLSDKRV 287
Query: 206 PVYIAIHA 213
+ +
Sbjct: 288 QPFFHLSI 295
>gi|296129601|ref|YP_003636851.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
DSM 20109]
gi|296021416|gb|ADG74652.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
DSM 20109]
Length = 349
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+V RY + L C + C +C E + + TVL+ + + E
Sbjct: 16 GLVDRYGRVATDLRVSLTDRCNLRCTYCMPAEGLPWAPDDTVLTDAEVVRLVRIGVEHLG 75
Query: 144 IWEVIFTGGDPLILSHKRLQKVLK---TLRYIK--HVQILRFHSRVPIVDPQRINPELIQ 198
I EV FTGG+PL+ + L+ ++ LR HV+ + + +
Sbjct: 76 IREVRFTGGEPLL--RRGLESIVAGTHALRTADGAHVRT------SLTTN-GLGLDKRAR 126
Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLAN--AG---------IILLSQSVLLKG 246
L EAG V +++ + P F+ RLA+ AG + +VL++G
Sbjct: 127 SLAEAGLDRVNVSLDSLDPVRFATITRR--DRLADVLAGLAAASATGLAPVKVNAVLVRG 184
Query: 247 INDDPEI 253
+NDD +
Sbjct: 185 VNDDEAV 191
>gi|227874225|ref|ZP_03992425.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Oribacterium sinus F0268]
gi|227839933|gb|EEJ50363.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Oribacterium sinus F0268]
Length = 328
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 22/174 (12%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C ++C++C E + + + A A + I TGG+PL+
Sbjct: 14 MSITDRCNLHCQYCMPNGLENPLPMDRLLTYEELLQVAKAAVAC--GITRFKVTGGEPLV 71
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213
+ +L+ + V+ + + + E + +E G V +
Sbjct: 72 RKGAV--DFMASLKALPGVEQVTITTNGL------LLSEALPRFQEMGLDGINVSLDTLI 123
Query: 214 -NHPYEFSE--EAIAAISRLANA---GIILLSQSVLLKGIN-DDPEILANLMRT 260
YE + + + A GI + +VL KG+N D+ L L +
Sbjct: 124 PERFYEITGFDALDKVLQGIKEAVVSGIPVKLNTVLQKGVNEDEIFALLALCKK 177
>gi|154248939|ref|YP_001409764.1| biotin synthase [Fervidobacterium nodosum Rt17-B1]
gi|154152875|gb|ABS60107.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 349
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)
Query: 74 REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
D + + +Y R +++ + C +C +C R + ++
Sbjct: 20 STDEHNEEIFKVADEVRRKYVGTEVHLRAIIEFSNYCSQHCLYCGLRAENRNLNRYRMTE 79
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
++ I + V+ +G DP + +R+ ++ ++ + L R
Sbjct: 80 EEILERARLIAKLGIKTIVLQSGEDPYY-TTERISYLITEIKKLDVAITLSIGER 133
>gi|282849041|ref|ZP_06258430.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
gi|282581316|gb|EFB86710.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
Length = 399
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
CP C FC + + G + L+ + + + Y+ + + WEV F GG
Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68
Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
K LQ +L I + +R +R P + E I L+ G K V +
Sbjct: 69 TAITKDLQHKLLMPAYEILQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123
Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + H + E + A++RL + + + Q LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165
>gi|237752883|ref|ZP_04583363.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
BAA-430]
gi|229375150|gb|EEO25241.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
BAA-430]
Length = 366
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G K S + + + + E I TG +
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFSQEKILKQVESLAQ-KGFSEFIITGTN 189
Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206
+ S + + ++++L I ++ LR S ++P +I+ + L+ + +
Sbjct: 190 --MGSWGKDFGLNIATLVESLCEIPLLKRLRIGS----LEPSQIDTHFLSVLENPKIERH 243
Query: 207 VYIAIHANHPY 217
++IA+ P
Sbjct: 244 LHIALQHTSPK 254
>gi|255036824|ref|YP_003087445.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
DSM 18053]
gi|254949580|gb|ACT94280.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
DSM 18053]
Length = 330
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 39/178 (21%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQE---KSQIWE 146
R + + L C + C +C + + SK A +AY+ + + +
Sbjct: 11 RKHTYLRISLTDKCNLRCTYCM-----PQEDMQFMPSKWLMQADEIAYLAGLFVEMGVEK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+PL+ +++ TL + S + I + I LK AG
Sbjct: 66 IRLTGGEPLVRKDA--GEIIATLGKLP-------ASLTLTTNAVHI-DQFIAELKSAG-- 113
Query: 207 VYIAIHANHP---------YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
N E + + + I L G ++ V+++G NDD
Sbjct: 114 ---VTSLNVSLDTLKEARFREITKRDHFSKTLDHIRLLLAEGFVVKLNMVVMRGTNDD 168
>gi|210610065|ref|ZP_03288244.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
gi|210152676|gb|EEA83682.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
Length = 430
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 30/141 (21%)
Query: 90 VHRY----------PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
H Y R +K+ C +C +C + + +D + +
Sbjct: 129 THEYEEMHLNKTAEHTRAYIKVQDGCNQFCTYCIIP--FARGRVRSRAKEDVVREVTELA 186
Query: 140 EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
EV+ TG D L ++ L ++ + I+ ++ +R S ++P+ I
Sbjct: 187 AN-GYQEVVLTGIHLSSYGVD---LENENLLSLILAVNEIEGIKRIRLGS----LEPRII 238
Query: 193 NPELIQCLKEAGKPVYIAIHA 213
+ ++ + K + H
Sbjct: 239 TEDFVKTISGLEK---MCPHF 256
>gi|227542935|ref|ZP_03972984.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181157|gb|EEI62129.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 413
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 37/204 (18%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
P ++ ++ C + C+ C R + L+ ++ + L + + + V+FTG
Sbjct: 17 KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTMEEGKRLLDQLASYEKPYPLVVFTG 75
Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208
GDP S L + L I S P V P ++ PE + L+EA GK +
Sbjct: 76 GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125
Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254
+++ + E A + G L S L KG +
Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177
Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
L++ +E++ K +Y+
Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201
>gi|15613914|ref|NP_242217.1| hypothetical protein BH1351 [Bacillus halodurans C-125]
gi|10173967|dbj|BAB05070.1| BH1351 [Bacillus halodurans C-125]
Length = 448
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + + A +Q E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIKQAEQLVQA--GYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L L ++L+ L + ++ +R S ++ ++ E+I+ + + K
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVNGLKRIRISS----IEASQLTDEVIEVIDRSTK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|150016017|ref|YP_001308271.1| hypothetical protein Cbei_1133 [Clostridium beijerinckii NCIMB
8052]
gi|149902482|gb|ABR33315.1| protein of unknown function DUF512 [Clostridium beijerinckii NCIMB
8052]
Length = 444
Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 42/171 (24%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q V T + + +
Sbjct: 86 SCSNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMKDEDID 135
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+++K +I + + H+ +P+ +Q L F+
Sbjct: 136 RIIK--YHISPIN-ISVHT----TNPEL----RVQMLN---------------NRFAGNV 169
Query: 224 IAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFVELRIKP 268
+ + RLA+AGI + +Q V + GIN+ E L L ++ + P
Sbjct: 170 LERMQRLADAGITMNAQIVCVPGINNGNELKRTIEDLYKLYPEVSDVAVVP 220
>gi|257469523|ref|ZP_05633615.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
49185]
Length = 469
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + L+ ++ + +++ + G DPL S
Sbjct: 87 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 146
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
L +L+ ++ I ++ R V+ E + LKE KP
Sbjct: 147 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
Y +H N P E A+ R AGI
Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232
>gi|39995358|ref|NP_951309.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
gi|39982120|gb|AAR33582.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
Length = 428
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R +P +E+ P R + + RY ++ CP C FC
Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
V G +D + LA I+ +++ D L+ + + +L+ L +
Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPAKARPILRGLAEM-- 232
Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEA-I 224
+R+ S+ + R +PEL++ + ++G HAN + +
Sbjct: 233 --NVRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQA 286
Query: 225 AAISRLANAGIIL 237
+ R+ +AGIIL
Sbjct: 287 DLMKRVRDAGIIL 299
>gi|38233743|ref|NP_939510.1| putative coenzyme PQQ synthesis related protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38200004|emb|CAE49673.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium
diphtheriae]
Length = 399
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 43/230 (18%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+P D ++G ++ P + ++ C + C+ C R + L+++
Sbjct: 1 MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHC-RADAQHEPHPEQLTTE 59
Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---- 184
+ L+ + + V+ TGGDP L++++ + + +
Sbjct: 60 QGKQLLSDLASYERPKPLVVLTGGDPFERQD--LEELVD------------YGTSLGLNV 105
Query: 185 ---PIVDPQRINPELIQCLKEA-GKPVYIA-------IH-----ANHPYEFSEEAIAAIS 228
P V P R+ PE I L E GK + ++ H + F A +
Sbjct: 106 SLSPSVTP-RLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFS--GTFDTTVKRA-A 161
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ AG L S L K + L++T + + K +Y+
Sbjct: 162 DILQAGFRLQINSTLTK---SNIREAPALLKTVMGMGAKMWYVFFLVPTG 208
>gi|237727284|ref|ZP_04557765.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434140|gb|EEO44217.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 368
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 22/156 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
P +L C + C CF V + G +L + +Q+ ++ ++ TG
Sbjct: 24 PITANFELTPTCTLNCDMCFIHTERNVVERHGGLLPLQQWLDWAEQLQDMGTLF-ILLTG 82
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P++ +++ LR + + L + I+ E+++ L+
Sbjct: 83 GEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRRVNVT 133
Query: 212 HANHPYEFSEEAI----------AAISRLANAGIIL 237
E A+ RL AGI +
Sbjct: 134 LYGSSRETYGRLCHNPQGYTLCVEALKRLKKAGIDV 169
>gi|312795515|ref|YP_004028437.1| molybdenum cofactor biosynthesis protein A [Burkholderia
rhizoxinica HKI 454]
gi|312167290|emb|CBW74293.1| Molybdenum cofactor biosynthesis protein A [Burkholderia
rhizoxinica HKI 454]
Length = 372
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE 116
R+ IP EL+ +P P G + + P R L + + C C +C R
Sbjct: 12 RRVIPL-NELSAVPAFSSAP-GAPRGHVIDRLAR--PLRDLRISVTDRCNFRCVYCMPRT 67
Query: 117 MVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ G +L+ ++ E + + ++ TGG+PL+ K L+++++ L
Sbjct: 68 VFGRDYPFLPHSALLTFEEIERVARLFVAQ-GVEKIRLTGGEPLL--RKHLERLIERLAA 124
Query: 172 I 172
+
Sbjct: 125 L 125
>gi|283956404|ref|ZP_06373884.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
1336]
gi|283792124|gb|EFC30913.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
1336]
Length = 416
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLRKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|218134604|ref|ZP_03463408.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC
43243]
gi|217989989|gb|EEC56000.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC
43243]
Length = 354
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 29/164 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI----FTGGDP 154
+ C C+ C+ G + ++ K + +A ++ +I+ + TGGDP
Sbjct: 12 WHITDECDQRCKHCYIFSGKGCSELKSMTWKQMQEVVANCEDFCRIYNKLPYFYITGGDP 71
Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
++ +L +LK+ R I + +P ++ E+ LK G Y
Sbjct: 72 ILHPDFWKLMVLLKS-RGIPF---------TIMGNPFHLDDEVCTILKACGCEKYQMSLD 121
Query: 211 ----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
H P F + + L AGI SV++ ++
Sbjct: 122 GMRSTHDWFRKPRSFD-LTLEKVGCLNRAGIK----SVIMSTVS 160
>gi|171320975|ref|ZP_02909966.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
gi|171093770|gb|EDT38910.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
Length = 372
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 57/245 (23%)
Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
PL + P R L L ++ C C +C R+ G + SS+ A L I
Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88
Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
+ ++ TGG+PL+ + L+ +++ L + + + LR
Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTIDGKPVEIALTTNGSLLAAKARTLR 146
Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
SRV + I+ + + + +A PV + A I AG
Sbjct: 147 DAGLSRVTVSL-DAIDDVVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192
Query: 237 LLSQSVLLKGINDD--PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG 290
+ +V+ +G NDD ++ + V +R Y G S + +
Sbjct: 193 VKVNAVIERGANDDQILPLVRHFRHGGVAVRFIEY-----MDVGGASAWSGDKVVPATRM 247
Query: 291 QKIVA 295
++++
Sbjct: 248 RELIE 252
>gi|46907279|ref|YP_013668.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
serotype 4b str. F2365]
gi|47092939|ref|ZP_00230720.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 4b H7858]
gi|254933405|ref|ZP_05266764.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HPB2262]
gi|67460888|sp|Q721B9|MOAA_LISMF RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|46880546|gb|AAT03845.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018686|gb|EAL09438.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
str. 4b H7858]
gi|293584966|gb|EFF96998.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
HPB2262]
gi|328466819|gb|EGF37933.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
1816]
gi|332311456|gb|EGJ24551.1| Molybdenum cofactor biosynthesis protein [Listeria monocytogenes
str. Scott A]
Length = 333
Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
V TGG+PL+ + + ++++ L I ++ + + + + LK+AG
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116
Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
V I++ + H F I + G + VL+KG NDD
Sbjct: 117 RVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170
>gi|311694651|gb|ADP97524.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [marine bacterium HP15]
Length = 298
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 23/161 (14%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L + + C C FC + + + + V GD +
Sbjct: 22 LILPVTNGCSWNKCTFCEMYTQPQKKFRARKPEDVLQDIRNAARSLGGVRRVFLADGDAM 81
Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAI 211
+L +RL ++L LR +Q + P + E + LK+AG +
Sbjct: 82 VLPTRRLLEILGQLREAFPDLQRV-----SSYCLPRNLAKKTVEELAQLKDAGLEILYVG 136
Query: 212 HANHPYEF--------SEE-AIAAISRLANAG----IILLS 239
+ E + E +A+ ++ AG +++L+
Sbjct: 137 MESGDDEILRRVNKGETWESTRSALLKIREAGLTSSVMVLN 177
>gi|306821117|ref|ZP_07454733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550810|gb|EFM38785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 475
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ D + + ++G+ V RY + + +++ C +C +C ++ + L +
Sbjct: 165 VWDIDGNIVEGLPSVRRYDFKAFVNIMYGCNNFCTYCI-VPFTRGRERSRLPKDILDEVK 223
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+ G + + K L+ + + +++ +RF + P+
Sbjct: 224 --LLAQNNVKEITLLGQNVNSYGNNFTDKYSFPMLLEDINKVDNIRRIRFMTSH----PK 277
Query: 191 RINPELIQCLKEAGK 205
I+ ELI+ K
Sbjct: 278 DISDELIESFGRLDK 292
>gi|237746858|ref|ZP_04577338.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
gi|229378209|gb|EEO28300.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
Length = 298
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152
+ ++L++ + C C +C ++ +V +D + + + I V G
Sbjct: 20 NSLILQVTNGCSWNKCTYCDMYTQPQ-KRFSVKPEEDVKKEIEWFSRHYDGIQRVFLADG 78
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI----NPELIQCLKEAGKP 206
D + LS +RL +L T+R + V +RV P+ + + EL K
Sbjct: 79 DVVALSTRRLLNILNTIREYLPEV------TRVASYCSPRNVANKSDEELKTLFDAGLKQ 132
Query: 207 VYI--------AIHANHPYEFSEEAIAAISRLANAGI 235
VY+ + + + E + + A++RL +AGI
Sbjct: 133 VYVGAESGDDFVLESINKGETHQSTVEALNRLGDAGI 169
>gi|189348694|ref|YP_001941890.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189338832|dbj|BAG47900.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 374
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE+ GS + + A L I + ++ TGG+P
Sbjct: 46 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 105
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR +RV + +
Sbjct: 106 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 162
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G NDD
Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 208
Query: 252 EILANLMRTFVELRI 266
+ L+R F +
Sbjct: 209 -QILPLVRHFRHTGV 222
>gi|302554728|ref|ZP_07307070.1| radical SAM domain-containing protein [Streptomyces
viridochromogenes DSM 40736]
gi|302472346|gb|EFL35439.1| radical SAM domain-containing protein [Streptomyces
viridochromogenes DSM 40736]
Length = 409
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 35/191 (18%)
Query: 96 RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----V 147
+LK+ C + C +C + Q+ V+S I E ++ V
Sbjct: 34 TFILKVHSRCDLACDYCYMYTAADQTWRQQPRVMSPAVVTWTARRIAEHVRVHGLRQVAV 93
Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ GG+PL+ +RL++++ + R + +R + R+ + E
Sbjct: 94 VLHGGEPLLAGPRRLRQIVTEIAREVGPEVRVRTSVQTNGV-----RLTDAWLDLFAELD 148
Query: 205 KPVYIAI---------HANHP--YEFSEEAIAAISRLANA-----GIILLSQSVLLKGIN 248
V ++I H HP ++ A+ RLA A LL +V L+ N
Sbjct: 149 IRVGVSIDGGRSEHDRHRRHPDGRGSHDQVAQAVQRLAAAPRRRLFAGLLC-TVDLR--N 205
Query: 249 DDPEILANLMR 259
D L+R
Sbjct: 206 DPVATYEELLR 216
>gi|228945768|ref|ZP_04108115.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228813989|gb|EEM60263.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 333
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|229091138|ref|ZP_04222361.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
gi|228692269|gb|EEL46005.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
Length = 333
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|229184372|ref|ZP_04311579.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
6E1]
gi|228599168|gb|EEK56781.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
6E1]
Length = 333
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|118477567|ref|YP_894718.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
gi|225864114|ref|YP_002749492.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|118416792|gb|ABK85211.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
gi|225790320|gb|ACO30537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 337
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|49481735|ref|YP_036288.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|301053674|ref|YP_003791885.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|49333291|gb|AAT63937.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|300375843|gb|ADK04747.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 337
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|52143300|ref|YP_083529.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51976769|gb|AAU18319.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 337
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|30262154|ref|NP_844531.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47778008|ref|YP_018776.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49184996|ref|YP_028248.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|167633002|ref|ZP_02391328.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|167638349|ref|ZP_02396626.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|170686396|ref|ZP_02877617.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|170706016|ref|ZP_02896478.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|177650979|ref|ZP_02933876.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|229602502|ref|YP_002866510.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
gi|254684722|ref|ZP_05148582.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254720932|ref|ZP_05182723.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254737167|ref|ZP_05194871.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
gi|254743647|ref|ZP_05201332.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|254751482|ref|ZP_05203519.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Vollum]
gi|254758355|ref|ZP_05210382.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Australia 94]
gi|30256780|gb|AAP26017.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Ames]
gi|47551713|gb|AAT31251.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
'Ames Ancestor']
gi|49178923|gb|AAT54299.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Sterne]
gi|167513650|gb|EDR89019.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0193]
gi|167531814|gb|EDR94479.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170129018|gb|EDS97883.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0389]
gi|170669472|gb|EDT20214.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|172083440|gb|EDT68501.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0174]
gi|229266910|gb|ACQ48547.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0248]
Length = 337
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|70725785|ref|YP_252699.1| hypothetical protein SH0784 [Staphylococcus haemolyticus JCSC1435]
gi|82592973|sp|Q4L8D2|MOAA_STAHJ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|68446509|dbj|BAE04093.1| moaA [Staphylococcus haemolyticus JCSC1435]
Length = 340
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +L+ ++ +A + + + ++ TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYVFLPKDELLTFEEMVR-IAKVYAELGVKKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + L +++ L I ++ + + LK+ G+ +Y
Sbjct: 77 PLL--RRNLYQLIAELNQIDGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121
Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
I + + E AI+ +L Q V+ KGINDD
Sbjct: 122 RINVSLDA---IDNEVFQAINNRNIKATTILDQIDYAVSIGFHVKVNVVIQKGINDD 175
>gi|86150946|ref|ZP_01069162.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124495|ref|YP_004066499.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842116|gb|EAQ59362.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018217|gb|ADT66310.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 416
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|238026593|ref|YP_002910824.1| molybdenum cofactor biosynthesis protein A [Burkholderia glumae
BGR1]
gi|237875787|gb|ACR28120.1| Molybdenum cofactor biosynthesis protein A [Burkholderia glumae
BGR1]
Length = 370
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 47/197 (23%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRDVFDKDYPFLPHSALLSLEELERVARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
PL+ K L+ +++ L ++ V + LR +RV +
Sbjct: 100 PLL--RKNLEFLIERLARMQTVGGHPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
++ L + + N S + + I +AG + V+ +G ND
Sbjct: 157 LDDALFRRM-------------NDANFASADVLEGIFAAQDAGLAPVKVNMVVKRGTND- 202
Query: 251 PEILANLMRTFVELRIK 267
+ + R F I
Sbjct: 203 -AEIVPMARRFKGTGIV 218
>gi|182418337|ref|ZP_02949632.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237666343|ref|ZP_04526328.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377719|gb|EDT75263.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237657542|gb|EEP55097.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 466
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 20/121 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD E ++ I++ ++ E+I +G
Sbjct: 173 KTRAFLKIQDGCNRFCAYCLI-----PYTRGAVCSKDPEKVISEIKKLAEHGFKEIILSG 227
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + L +L+ + + ++ +R S P +I+ +K
Sbjct: 228 IHTASYGVD--LEGDVSLMTILEEIEKVDGIERVRIGSIEPCF----FTDSVIEKMKSMK 281
Query: 205 K 205
K
Sbjct: 282 K 282
>gi|157415263|ref|YP_001482519.1| MiaB-like tRNA modifying protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|157386227|gb|ABV52542.1| hypothetical protein C8J_0943 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747905|gb|ADN91175.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
M1]
gi|315932134|gb|EFV11077.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 416
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|167747072|ref|ZP_02419199.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
gi|167654032|gb|EDR98161.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
Length = 439
Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C +C +C + + S+D E L+ I+ ++ E + T
Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLAQNGCREFVITG 200
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D + K L +L+ + + V +R S ++P I + ++ L+
Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252
>gi|317471887|ref|ZP_07931222.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
gi|316900660|gb|EFV22639.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
Length = 439
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C +C +C + + S+D E L+ I+ ++ E + T
Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLARNGCREFVITG 200
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D + K L +L+ + + V +R S ++P I + ++ L+
Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252
>gi|313112748|ref|ZP_07798396.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624947|gb|EFQ08254.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 322
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 16/158 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + +C + CR+C + +L+ ++ A + I V TGG+PL+
Sbjct: 14 LSVTDLCNLRCRYCMPDGVPKLAHEDILTYEEFLRLAALFAQC-GIDTVRITGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
+ ++++ L+ I ++ + + ++ +L L V I++ HP
Sbjct: 71 RRGVEQLTAGLKAIPGIRRVALTTNGVLLA-----QKLPALLAAGLDSVNISLDTLHPET 125
Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
+ I +GI + V G+N
Sbjct: 126 FRRITGKDELAAVQNGIRAALASGIPVKLNCVPQPGVN 163
>gi|311070188|ref|YP_003975111.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
1942]
gi|310870705|gb|ADP34180.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
1942]
Length = 341
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
DR L + + C C +C E+ G K +LS ++ E +
Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLAKLFVSRFG 70
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRIN 193
+ ++ TGG+PL+ + +++K L I V+ + S +P+ R+
Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVYAEKLKNAGLHRVT 128
Query: 194 -------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
E + + G V + I AG+ + V+ KG
Sbjct: 129 VSLDSLEDERFKAINGRGVSVSKVL-------------EGIEAAKQAGLGIKVNMVVQKG 175
Query: 247 IN 248
+N
Sbjct: 176 VN 177
>gi|260886564|ref|ZP_05897827.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|330839603|ref|YP_004414183.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|260863707|gb|EEX78207.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|329747367|gb|AEC00724.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
Length = 330
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C +YC+ C+R G + LS+ + + L I + +IF+GG+PL
Sbjct: 7 TTNACNMYCKHCYRDA--GCKAEEELSTAEAKKLLDEIAR-AGFKIMIFSGGEPLTRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ ++++ + LR F + + I PE+ + LK AG
Sbjct: 63 -ILELVEHATKLG----LRSVFGTNGTL-----ITPEMARDLKAAG 98
>gi|169333944|ref|ZP_02861137.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
17244]
gi|169259509|gb|EDS73475.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
17244]
Length = 408
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C ++C +C + +L + E L+ I K EV+ TG
Sbjct: 120 KSRAFIKVQDGCNMFCTYC-----IIPYARGILKNASVEKVLSQIDALSKKGYREVVITG 174
Query: 152 GDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ ++ L I + +R S ++P+ + ++ L E K
Sbjct: 175 IHVASYKADTGENLIDLLELIDKENKIDRIRLGS----LEPKLLTDTFLKRLSEL-KSFC 229
Query: 209 IAIHAN 214
H +
Sbjct: 230 PHFHIS 235
>gi|34557848|ref|NP_907663.1| 2-methylthioadenine synthetase [Wolinella succinogenes DSM 1740]
gi|34483566|emb|CAE10563.1| conserved hypothetical protein-2-methylthioadenine synthetase
[Wolinella succinogenes]
Length = 416
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 23/183 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C + G K L + + + + E + TG +
Sbjct: 133 KSRAFVKVQEGCDFSCSYCIIPSVRG--KARSLPVDRIVSQVEILAQH-GFGEFVLTGTN 189
Query: 154 PLILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE----AGKP 206
+ + K+LK L IK V+ LR S ++P +I+ E ++ L+E
Sbjct: 190 VGSYGKESGLNVAKLLKALSQIKGVKRLRLGS----LEPSQIDAEFMELLEEPFMARHLH 245
Query: 207 VYI------AIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ + + N E + A RLA G L + +L + E+
Sbjct: 246 IALQHTSPKMLQIMNRRNEAQGDL-ALFERLAQKGYALGTDF-ILGHPGESEEVWKEAWE 303
Query: 260 TFV 262
FV
Sbjct: 304 RFV 306
>gi|146306671|ref|YP_001187136.1| radical SAM domain-containing protein [Pseudomonas mendocina ymp]
gi|145574872|gb|ABP84404.1| Radical SAM domain protein [Pseudomonas mendocina ymp]
Length = 297
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC EM + + + + + L I+ + + V G
Sbjct: 23 LILPVTNGCSWNQCTFC---EMYTAPQKKFRARDEAQ-VLEEIRRAGEQLIVNRVFLADG 78
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL +L+ +R + V+ +
Sbjct: 79 DALVLPTRRLLAILQAIREHMPEVRRV 105
>gi|300870181|ref|YP_003785052.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000]
gi|300687880|gb|ADK30551.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000]
Length = 415
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C V+C +C + G K + A+ I E++ TG +
Sbjct: 126 QSRAYLKIQDGCEVFCSYCIVSRVRGKHKSLEPNK--IYEAIK-IANDYNYKEIVLTGLN 182
Query: 154 --PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+++ + +LK + +R R+ V+P + ELI K +
Sbjct: 183 LGSYNFNNEIKFADILKNILEHSSKYGIRI--RLSSVEPIYFDDELINLFKNKDV-LCPH 239
Query: 211 IHA 213
H
Sbjct: 240 AHI 242
>gi|296502742|ref|YP_003664442.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|296323794|gb|ADH06722.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 337
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L ++ L ++ +Q + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|30020258|ref|NP_831889.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|229043907|ref|ZP_04191603.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|29895808|gb|AAP09090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|228725438|gb|EEL76699.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 337
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L ++ L ++ +Q + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|255081048|ref|XP_002504090.1| molybdopterin synthase [Micromonas sp. RCC299]
gi|226519357|gb|ACO65348.1| molybdopterin synthase [Micromonas sp. RCC299]
Length = 365
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 44/211 (20%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ RQ +EE R P+ D G H Y + + L C + C +C
Sbjct: 25 LRRQ---LREE---AIAGRSGPLEDT-----FGRRHNY---LRISLTEKCNLRCLYCMPE 70
Query: 116 EMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
E + + K +LS+ + + ++ TGG+P + L+++++ LR +
Sbjct: 71 EGIDLTAKEELLSTDEVVRVARLFVAN-GVDKIRLTGGEPTVRPD--LEEIIRRLRALPG 127
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN--------------HPYEFS 220
++ + + + L+ AG H N
Sbjct: 128 LRDIAITTNGLT------LHRNLHALQAAGL-----THVNISLDTLVPPKFELLTRRRGH 176
Query: 221 EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + +I R G + VL++G+NDD
Sbjct: 177 DRVLKSIDRAVELGYDPVKVNVVLMRGVNDD 207
>gi|255282411|ref|ZP_05346966.1| MiaB protein [Bryantella formatexigens DSM 14469]
gi|255266995|gb|EET60200.1| MiaB protein [Bryantella formatexigens DSM 14469]
Length = 454
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + L+ D A ++ + E EV+ TG
Sbjct: 173 HTRAYIKVQDGCNQFCSYCIIPYARGRIRSRELA--DVLAEVSTLAEN-GYQEVVLTGIH 229
Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
++ L ++++ + ++ ++ +R S ++P+ I E + L E K
Sbjct: 230 LSSYGKEKDDGIGLLQLIEAVHEVEGIRRIRLGS----LEPRIITEEFAERLSELPK--- 282
Query: 209 IAIHA 213
I H
Sbjct: 283 ICPHF 287
>gi|325295204|ref|YP_004281718.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065652|gb|ADY73659.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 437
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C ++C +C + + + S+ E L ++E S E++ T
Sbjct: 142 KTRAFLKIQQGCELFCSYC-----IIPKARGKMLSEKPEKVLEQVKELINSGYKEIVLTG 196
Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GG L L L K+++ + I + LR S V+P + ELI+ + + K
Sbjct: 197 THLGGYGLDLEESLSLAKLIEKIVKIPGLYRLRISS----VEPIEFSDELIEVVTSSPK- 251
Query: 207 VYIAIHA 213
+ +H
Sbjct: 252 IAPHLHI 258
>gi|315638251|ref|ZP_07893433.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21]
gi|315481787|gb|EFU72409.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21]
Length = 413
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C V + +V S E IQ E++ TG +
Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187
Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243
Query: 211 IHANHPYE 218
I H E
Sbjct: 244 IALQHTSE 251
>gi|261419008|ref|YP_003252690.1| radical SAM protein [Geobacillus sp. Y412MC61]
gi|319765824|ref|YP_004131325.1| radical SAM protein [Geobacillus sp. Y412MC52]
gi|261375465|gb|ACX78208.1| Radical SAM domain protein [Geobacillus sp. Y412MC61]
gi|317110690|gb|ADU93182.1| Radical SAM domain protein [Geobacillus sp. Y412MC52]
Length = 372
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 28/182 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ L K I + LR S P P + E I+ KE G +
Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116
Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI---LANLMR 259
I H + I AI L I + +V+ + + + +A L+
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY---NVHVLNEMAALVE 173
Query: 260 TF 261
Sbjct: 174 KL 175
>gi|57242028|ref|ZP_00369968.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195]
gi|57017220|gb|EAL54001.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195]
Length = 413
Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ +K+ C C +C V + +V S E IQ E++ TG +
Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187
Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L L K+L+ + I ++ +R S ++P +I+ ++ L E ++
Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243
Query: 211 IHANHPYE 218
I H E
Sbjct: 244 IALQHTSE 251
>gi|212704636|ref|ZP_03312764.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
gi|212672035|gb|EEB32518.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
Length = 335
Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 19/162 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L L C + C +C VL ++ + I + +V TGG+P
Sbjct: 19 LSLTDRCNLRCLYCHSNARHQCIPHEKVLRYEEMIRLVQ-IVRGMGVGKVRLTGGEPFAR 77
Query: 158 S--HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEA--GKPVY 208
L ++ + + +R + + P QRI + ++ +
Sbjct: 78 KGCDDFLLRLRQRFDDLD----IRITTNGTLLEEHIPLLQRIRISAVNLSLDSFDRETFA 133
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ E + A+ + AGI + +V L+GIND
Sbjct: 134 RVT----GRDMLPEVLRALDAMLAAGIRVKINAVGLRGINDS 171
>gi|238019507|ref|ZP_04599933.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
gi|237864206|gb|EEP65496.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
Length = 380
Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
CP C FC + + G + L+ + + Y+ + + WEV F GG
Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPDYIKKTITDYVGKKRNDKFWEVAFYGG-SF 68
Query: 156 ILSHKRLQK-VLKTLRYI---KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
H+ LQ +L+ + + +R +R P + + I L+ G K V +
Sbjct: 69 TAIHRDLQHTLLEPAYEMLQQDIIDGIRCSTR-----PDAVGDKAITLLQSYGVKTVELG 123
Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + H + E + A++RL G+ + Q LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVDAVARLKQRGMTVGVQ--LLPG 165
>gi|128228|sp|P11067|NIFB_AZOVI RecName: Full=FeMo cofactor biosynthesis protein nifB
gi|142338|gb|AAA22148.1| nifB [Azotobacter vinelandii]
Length = 502
Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 59/201 (29%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + + A Q
Sbjct: 52 AHHYFARMHVAVAPACNIQCHYCNRKYDCANESRPGVVSEVLTPEQAVKKVKAVAAAIPQ 111
Query: 144 IWEVIFTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQ 176
+ + G GDPL + L + ++ L I HV
Sbjct: 112 MSVLGIAGPGDPLANPKRTLDTFRMLSEQAPDMKLCVSTNGLALPECVEELAKHNIDHV- 170
Query: 177 ILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIHANHPYE-----FSEEAIAAIS 228
+ + VDP+ +I P+L++ HP E+ +
Sbjct: 171 TITIN----CVDPEIGAKIYPDLLE-------------QQAHPRRQGRKILIEQQQKGLE 213
Query: 229 RLANAGIILLSQSVLLKGIND 249
L GI++ SV++ G+ND
Sbjct: 214 MLVARGILVKVNSVMIPGVND 234
>gi|229155743|ref|ZP_04283849.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
4342]
gi|228627729|gb|EEK84450.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
4342]
Length = 337
Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K+++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIERLAKLEGIKDIGLTTNGIHLAKQ------AKVLKEAGLKRVNISLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + + AG+ + V+ KG+ND
Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175
>gi|295101447|emb|CBK98992.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
prausnitzii L2-6]
Length = 441
Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 21/131 (16%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C +C R + + ++ A + E+I
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLRSREMADCVAEARWLAG-------EGVKELIIVAQ 198
Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DP + ++L L I ++ +R P+RI + I +K K +
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKIPGLEWIRI----MYAYPERITDDFIAAMKRNEKVL 254
Query: 208 -YIAIHANHPY 217
Y+ + H
Sbjct: 255 PYLDLPIQHCN 265
>gi|313112838|ref|ZP_07798485.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624908|gb|EFQ08216.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 441
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C +C R + ++ A + E+I
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQ 198
Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DP + ++L L + ++ +R P+RI E I +K K V
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVV 254
Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
Y+ + H E + I +L GI L + L+ G
Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSNRAELLEVIGKLRREIPGITLR--TTLIAG 304
>gi|164686289|ref|ZP_02210319.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
16795]
gi|164601891|gb|EDQ95356.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
16795]
Length = 432
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D E+ + ++ + EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRYCSYC-----IIPYARGRVRSRDLESIVKEVENLASNGYKEVVLTG 195
Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
S +L V+K + I+ ++ +R S V+P E ++ + K
Sbjct: 196 IHVASYGKDIKDSDIKLLDVIKQINDIEGIERIRLSS----VEPILFTDEFVEAVSTMDK 251
>gi|94269536|ref|ZP_01291489.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
gi|93451185|gb|EAT02100.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
proteobacterium MLMS-1]
Length = 338
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L + C + CR+C + + +LS ++ E + + I +V TGG+PL+
Sbjct: 25 VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + LR I ++ L + + ++ ++ L+ +G + + +
Sbjct: 84 --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137
Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260
+ I GI L +V+ +GIN D+ LA L
Sbjct: 138 RFATITGQDLFGRVFTVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRFI 197
Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
DLA +HF+ + E +IV
Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234
>gi|18309092|ref|NP_561026.1| thiamine biosynthesis protein ThiH [Clostridium perfringens str.
13]
gi|18143767|dbj|BAB79816.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 473
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYEKLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|258516114|ref|YP_003192336.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
acetoxidans DSM 771]
gi|257779819|gb|ACV63713.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
acetoxidans DSM 771]
Length = 325
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C V + + +L+ ++ E + + ++ FTGG+PL+
Sbjct: 14 VSVTDRCNLRCVYCMPAGGVAAARHEDILTLEEIEQVIRA-AADVGVRKIRFTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
K L ++K + I+ + + + + P+ + LK AG K V I++ P
Sbjct: 72 -RKGLPGLVKNIANIRAIDDIALTTNGI------LLPDFGEELKAAGLKRVNISLDTLKP 124
Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + E+ I + + +V+++GINDD
Sbjct: 125 ERFREITRLGALEDVWKGIRAALRLNLTPVKINTVVMRGINDD 167
>gi|253702046|ref|YP_003023235.1| radical SAM protein [Geobacter sp. M21]
gi|251776896|gb|ACT19477.1| Radical SAM domain protein [Geobacter sp. M21]
Length = 511
Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 25/126 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C + + T+LS+K + ++ + I +V +GGDPL
Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLSAKRWKEIISE-AKSLGIEQVTLSGGDPLYRK 201
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG--KPVYIAIHAN 214
+ L I + ++ P + I E+ L E G KP+ N
Sbjct: 202 --------EALVLIGEL----IAKKMLFQLPTKCCITEEIADRLVEVGMTKPI------N 243
Query: 215 HP-YEF 219
H E
Sbjct: 244 HYLREI 249
>gi|289671288|ref|ZP_06492363.1| hypothetical protein XcampmN_23120 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 33
Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
C V+CR+CFRR +++ + A+
Sbjct: 1 TGSCAVHCRYCFRRHFPYAEE--TAARDGWREAV 32
>gi|302671973|ref|YP_003831933.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
gi|302396446|gb|ADL35351.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
Length = 454
Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C V + S++ L I+ + EV+ TG
Sbjct: 159 HTRAYIKIQDGCNQFCSYC-----VIPYARGRVRSREMSEILTEIEGLVQKGCKEVVLTG 213
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
G+P+ L +++ + I + +R S ++P+ I E + L
Sbjct: 214 IHIGSYGLDKGEPM------LVDLVEKIADISGIDRIRLGS----IEPRLITAENTRRLA 263
Query: 202 EAGKPVYIAIHA 213
K + H
Sbjct: 264 AIDK---LCPHF 272
>gi|282857132|ref|ZP_06266378.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282585067|gb|EFB90389.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 436
Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 20/138 (14%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127
R D + + + SP Y R +K+ C C +C R V +L+
Sbjct: 137 GRRWDSL-ELDRSP-------YFGRAFVKVQDGCDHRCTYCIVPVLRGPSVSRPVADILA 188
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
AA + + G D S + +++ L ++ +Q LRF S +
Sbjct: 189 EARRCAAAGQFELILTGVHLGLFGRD----SGESFAALVRALDSVEGIQRLRFGS----L 240
Query: 188 DPQRINPELIQCLKEAGK 205
+P I +L++ L ++ +
Sbjct: 241 EPFSIGDDLLEALAQSPR 258
>gi|269797947|ref|YP_003311847.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
gi|269094576|gb|ACZ24567.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
Length = 431
Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C YC FC + L S+ + + + E++ TG
Sbjct: 143 KTRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTG 197
Query: 152 ---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G+ + R L V+K L I ++ +RF S ++ ++ EL++ L K
Sbjct: 198 IHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKR 252
Query: 207 VYIAIH 212
V +H
Sbjct: 253 VCPHLH 258
>gi|169342221|ref|ZP_02863304.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens C str. JGS1495]
gi|169299705|gb|EDS81762.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens C str. JGS1495]
Length = 473
Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|110803728|ref|YP_697445.1| thiamine biosynthesis protein ThiH [Clostridium perfringens SM101]
gi|110684229|gb|ABG87599.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens SM101]
Length = 473
Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|294102421|ref|YP_003554279.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
12261]
gi|293617401|gb|ADE57555.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
12261]
Length = 434
Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 11/142 (7%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
R D + L R +K+ C +C +C V + + + E
Sbjct: 130 RNDILHSEEWDHLFQFQPLLHSRAFVKIQDGCNHFCSYCVI-PFVRGEPVSRPLNSVLEE 188
Query: 134 ALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ S EV+ TG G L ++++ I V+ +RF S ++P
Sbjct: 189 VRS--IADSGCTEVVLTGVHLGLYGQFGEVSLGELVRQAGAIPGVERIRFGS----LEPF 242
Query: 191 RINPELIQCLKEAGKPVYIAIH 212
IN EL+ L E +H
Sbjct: 243 GINDELLSALAETP-QFCPHLH 263
>gi|167463117|ref|ZP_02328206.1| molybdenum cofactor biosynthesis protein A [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 334
Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 25/177 (14%)
Query: 89 IVHRY---PDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
++ RY D + + + C + C +C E M +L+ + + + +
Sbjct: 5 LIDRYGRVHDYLRISVTDRCNLRCVYCMPEEGMEFEPDDHLLTFNEITTVVRVLAR-LGV 63
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ TGG+PL+ K ++ ++ L I ++ + + + P+ + LK AG
Sbjct: 64 RKLRLTGGEPLV--RKHIEDLVNRLSSIPGIEDIALTTNGMFLGPK------AEQLKAAG 115
Query: 205 KPVYIAIHANHPYE-----FS--EEAIAAISRL-ANAGI---ILLSQSVLLKGINDD 250
I I + E + + + L A+A + + VL+KGINDD
Sbjct: 116 LT-RINISLDSLKEDRFAFITRGGKLKKVLEGLNASAKVGFNPIKLNVVLMKGINDD 171
>gi|253574631|ref|ZP_04851971.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845677|gb|EES73685.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
str. D14]
Length = 447
Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + S + A + E++ TG
Sbjct: 143 HTRAYLKIQEGCNNFCTFCIIPWSRGLSRSRDPQSV-IQQARQLVAA--GYKEIVLTGIH 199
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD L + RL +L L ++ + +R S ++ +I+ ++ LK + K
Sbjct: 200 TGGYGD--DLENYRLSDLLWDLDKVEGLGRIRISS----IEASQIDDRMLDVLKNSSK-- 251
Query: 208 YIAIHANHPYEF-SEEAIAAISR 229
+ H + P + S E + + R
Sbjct: 252 -MCRHFHIPLQAGSNEVLKRMRR 273
>gi|56410451|ref|YP_145825.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
gi|56378348|dbj|BAD74257.1| molybdopterin cofactor biosynthesis protein (moaA/nifB/pqqE family)
[Geobacillus kaustophilus HTA426]
Length = 341
Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C E+ G +G +L+ ++ A LA + + ++ TGG+
Sbjct: 22 LSVTDQCNFRCVYCMPAEVFGPNFRFLDEGQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L +++ L I ++ +
Sbjct: 81 PLLRRD--LDALIERLSAIPGLRDI 103
>gi|313902875|ref|ZP_07836271.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313466810|gb|EFR62328.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 458
Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 42/215 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L C + C+FC+ V+ AL+ E + + V F GG+P
Sbjct: 111 VNLYTTTRCNLNCKFCYLSADTRQQYGPNVMERTLLAKALSDCAE-AGVMCVNFLGGEPF 169
Query: 156 ILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ ++ + I+H + I + P + + L G V +
Sbjct: 170 L--DQQAIRY-----AIEHYYNRFLISITTNGTIAP-------DDYTLSLLSRPGVDVIV 215
Query: 210 AIHANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLK-GINDDPEILANLM 258
+IH++ P E + A + RL AG+ Q VL + DD L +
Sbjct: 216 SIHSSKP-EVHDFVTQATGAWHRAVHTLKRLTRAGVRTAVQMVLTRFTTKDDVIGLVRMA 274
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
R + ++ G+ +++EE I
Sbjct: 275 RELGANG-----FYVNNMFPGSH---MSLEEYVAI 301
>gi|295111872|emb|CBL28622.1| Predicted Fe-S oxidoreductases [Synergistetes bacterium SGP1]
Length = 358
Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 17/116 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEA----ALAYIQEKSQIWEVIFTGG 152
+ C CR C+ G + + ++ K + L + ++ TGG
Sbjct: 9 WHITDECDQRCRHCYI--FSGDPRRKLDSMTWKQLQETFYNCLDFCDVHDRLPYFYLTGG 66
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
DP++ L + H + F + +P + + + LK G Y
Sbjct: 67 DPILHPD------FWRLLKLFHKHAIPF---TIMGNPFHLTDRVCRELKSLGCQKY 113
>gi|229196388|ref|ZP_04323136.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
gi|228587242|gb|EEK45312.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
Length = 333
Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E I ++ TGG+
Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GINKIRLTGGE 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q LKEAG K V I++
Sbjct: 73 PLLRKD--LPKLIGRLAKLEGLKDIGLTTNGIHLAKQ------ATALKEAGLKRVNISLD 124
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 125 AIEDCVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171
>gi|182625971|ref|ZP_02953735.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens D str. JGS1721]
gi|177908778|gb|EDT71285.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens D str. JGS1721]
Length = 473
Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|317128304|ref|YP_004094586.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
2522]
gi|315473252|gb|ADU29855.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
2522]
Length = 448
Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + + A + E++ TG
Sbjct: 144 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EEVIKQAEQLVAS--GYKEIVLTGIH 200
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L +L L + ++ +R S ++ +I E+IQ + ++ K
Sbjct: 201 TGGYGED---MKDYSLANLLLDLEKVDGLKRIRISS----IEASQITDEVIQVIDQSEK- 252
Query: 207 VYIAIHA 213
V +H
Sbjct: 253 VVNHLHV 259
>gi|227499809|ref|ZP_03929904.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
gi|227218113|gb|EEI83381.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
Length = 431
Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 95 DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C +YC +C + R + S+ + + A K+ E++ TG
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIVSRDMESIKEEAIRLA------KNGYKEIVLTG 195
Query: 152 GDPLI----LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + KRL V++ + ++ +R S ++P+ I + ++ +K K
Sbjct: 196 IHVASYGKDLKNGKRLIDVIEEVAKTDGIERIRLSS----MEPRHITKDFLERMKATRK 250
>gi|319957591|ref|YP_004168854.1| GTP cyclohydrolase subunit moaa [Nitratifractor salsuginis DSM
16511]
gi|319419995|gb|ADV47105.1| GTP cyclohydrolase subunit MoaA [Nitratifractor salsuginis DSM
16511]
Length = 322
Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 46/255 (18%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C + + +LS +D + I + ++ TGG+PL+
Sbjct: 15 VSVTERCNFRCQYCMPEKPFSWVPQENLLSFEDLFKFIK-IAIDEGVSKIRLTGGEPLLR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
L + +K + K L + + P+ Q L++AG K + I++
Sbjct: 74 QD--LDRFVKMIHDYKPDIDL-----ALTTNGY-LLPDTAQALRDAGLKRINISL----- 120
Query: 217 YEFSEEAIAAIS-------------RLANAGIILLSQSVLLKGINDDPEILANL-MRTFV 262
A I+ + G+ + V LKGIND EIL L
Sbjct: 121 DSLKPAVAAQIAQKNVLGKVLEGIDKALEVGLGVKINMVPLKGIND-AEILDILEYARAR 179
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
+R++ + ++ + G++I+ +KE+ +
Sbjct: 180 GIRVR----FIEYMENAHANSEIEGMHGKEILERIKER---YTIRRLGREGA-------- 224
Query: 323 DTHNIKKVGNGSYCI 337
K+ Y
Sbjct: 225 SPSYNYKIEENGYIF 239
>gi|82751856|ref|YP_417597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
RF122]
gi|123741049|sp|Q2YYS8|MOAA_STAAB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|82657387|emb|CAI81829.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
RF122]
Length = 340
Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEAGKPV--YIA 210
L+ L ++ L I ++ + + ++ Q++ ++ + + + +
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N+ + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNCNIKATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|325284885|ref|YP_004264347.1| molybdenum cofactor biosynthesis protein A [Deinococcus
proteolyticus MRP]
gi|324316600|gb|ADY27712.1| molybdenum cofactor biosynthesis protein A [Deinococcus
proteolyticus MRP]
Length = 332
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 28/178 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C E+ G + +LS ++ E + + ++ TGG+
Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPQSELLSFEEIERVSRVMVG-LGVQKLRLTGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL----------RFHSRVPIVDPQRINPELIQCLKEA 203
PL+ + L ++ L I+ VQ L RF + + QR+ L E
Sbjct: 74 PLL--RRELPMLVAQLARIEGVQDLAMTTNGLLLPRFAAELKAAGLQRVTVSLDALDAET 131
Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD--PEILANLM 258
+ S E +A I +AG+ + +V+ +G ND E L
Sbjct: 132 FGQMNGLG-------VSPEKVLAGIDAALSAGLGVKLNTVVKRGANDAGLAEFWRELR 182
>gi|260591614|ref|ZP_05857072.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
gi|260536414|gb|EEX19031.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
Length = 454
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S + A K E++ TG
Sbjct: 161 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASL-VQQAEE--AAKEGGKEIVLTGVN 217
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + +R ++K L ++ ++ R S ++P I+ +LI+ ++
Sbjct: 218 IGDFGETTGERFLDLVKALDKVEGIERFRISS----LEPDLIDDDLIEYCAQSR---AFM 270
Query: 211 IHA 213
H
Sbjct: 271 PHF 273
>gi|227488321|ref|ZP_03918637.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091731|gb|EEI27043.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
51867]
Length = 413
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 76/204 (37%), Gaps = 37/204 (18%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
P ++ ++ C + C+ C R + L++++ + L + + + V+FTG
Sbjct: 17 KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTTEEGKRLLDQLASYEKPYPLVVFTG 75
Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208
GDP S L + L I S P V P ++ PE + L+EA GK +
Sbjct: 76 GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125
Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254
+++ + E A + G L S L KG +
Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177
Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
L++ +E++ K +Y+
Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201
>gi|153809478|ref|ZP_01962146.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
gi|149127859|gb|EDM19082.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
Length = 167
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C E G L+ + ++ + I+ + V F+GGDPL + L
Sbjct: 35 GCSHHCPGCHNPESWNPNAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPLFYPEEFLA 94
Query: 164 KVLKTLRYIKHVQI----------LRFHSRVPIVDPQ-------RINPELI 197
++K ++ + I +R R+ V P R +L
Sbjct: 95 -LVKRVKEETGMNIWCYTGYTYEEIREQPRLNAVLPYINVLVDGRFEQDLF 144
>gi|168205735|ref|ZP_02631740.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens E str. JGS1987]
gi|170662764|gb|EDT15447.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens E str. JGS1987]
Length = 473
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|169235987|ref|YP_001689187.1| coenzyme PQQ synthesis protein E [Halobacterium salinarum R1]
gi|167727053|emb|CAP13838.1| homolog to coenzyme PQQ synthesis protein E [Halobacterium
salinarum R1]
Length = 365
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 59/255 (23%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+G + +P+ P ++ ++ C + C C + LS+ + + L
Sbjct: 6 PVG--SMTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLT 60
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRIN 193
V+ +GGDPL T+ ++H R+ + P +
Sbjct: 61 DAAAFGDGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLT 109
Query: 194 PELIQCLKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-L 238
P I+ L +AG + H EF EA + A + G+ L +
Sbjct: 110 PTAIEALADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQV 165
Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI----- 293
+ +V D E L + EL + + + F + + G+ +
Sbjct: 166 NTTVCA----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSP 211
Query: 294 --VASLKEKISGLCQ 306
+ + G+ +
Sbjct: 212 ARAEEVMAWLDGVAR 226
>gi|95928924|ref|ZP_01311669.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95134825|gb|EAT16479.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 319
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 18/161 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDP 154
L + C + CR+C ++ +L ++ + A+ + ++ TGG+P
Sbjct: 16 LSITDQCNLRCRYCQPHGRAANRTRRLLRDREIMFLAQQAID-----LGVEKIRITGGEP 70
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ + ++L LR ++ +Q L + ++ R P+L + ++
Sbjct: 71 LV--RSGVIRLLSELRALEGLQHLVLTTNGLLLS--RYAPDLAAAGVKRINVSIDSLRHE 126
Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E I AG+ + V++ G+NDD
Sbjct: 127 RFREITRGGSLVEWCRGIDAAEKAGLTVKLNVVVMAGVNDD 167
>gi|329924074|ref|ZP_08279337.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
gi|328940913|gb|EGG37221.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
Length = 447
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + S + A + E++ TG
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD L RL +L L + ++ +R S ++ +I+ +++ L + K +
Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251
Query: 208 YIAIHA 213
+H
Sbjct: 252 CRHLHI 257
>gi|261405595|ref|YP_003241836.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
gi|261282058|gb|ACX64029.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
Length = 447
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + S + A + E++ TG
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD L RL +L L + ++ +R S ++ +I+ +++ L + K +
Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251
Query: 208 YIAIHA 213
+H
Sbjct: 252 CRHLHI 257
>gi|186475582|ref|YP_001857052.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
STM815]
gi|184192041|gb|ACC70006.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
STM815]
Length = 370
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E A + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFGKDYPFLPHSALLTFEEIERLAAIFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLARM 116
>gi|317125385|ref|YP_004099497.1| radical SAM protein [Intrasporangium calvum DSM 43043]
gi|315589473|gb|ADU48770.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043]
Length = 400
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 29/186 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
P ++ ++ C + C C R + + L+++ L I + V+ TGG
Sbjct: 21 PMIVIWEVTRACALVCLHC-RADAQHRRNPHELTTEQGRTLLDDIAAWGAPYPIVVLTGG 79
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-----KP 206
DP L ++++ H + H + P V P R+ PE++ L+ AG
Sbjct: 80 DPFERPD--LAELVR------HGSSIGLHMALSPSVTP-RLTPEVLAELRAAGAGALSLS 130
Query: 207 VYIAIHANH------PYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMR 259
+ A H P F AA + +AG L ++ +V + L +L+R
Sbjct: 131 LDGNTAATHDAFRGVPGVFDATLRAA-QDVRDAGFRLQINSTVTQANV----HELPDLLR 185
Query: 260 TFVELR 265
T ++L
Sbjct: 186 TVIDLG 191
>gi|313897359|ref|ZP_07830902.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
gi|312957729|gb|EFR39354.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
Length = 441
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Query: 90 VHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+HR+ R LK+ C +C +C L + A + E E+
Sbjct: 136 IHRFEHQTRAFLKIQDGCNQFCSYCIIP--FARGAERSLPEDEVLAIARSLSESGH-REI 192
Query: 148 IFTG---GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ +G G + L +++K + + I +Q +R S ++ I EL++ +K
Sbjct: 193 VLSGIHTGRYGNGINSSLCQLMKRMVKEIPKLQRIRISS----IEMNEITDELLEFIKGE 248
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 249 EK-IARHLHI 257
>gi|291535169|emb|CBL08281.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis M50/1]
Length = 435
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + +G V S K E L I+ KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250
Query: 209 IAIHA 213
I H
Sbjct: 251 ICPHF 255
>gi|262068133|ref|ZP_06027745.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
periodonticum ATCC 33693]
gi|291378221|gb|EFE85739.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
periodonticum ATCC 33693]
Length = 348
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I EV
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
K + + I +E + A R
Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134
>gi|237740803|ref|ZP_04571284.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 2_1_31]
gi|229422820|gb|EEO37867.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 2_1_31]
Length = 348
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I EV
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
K + + I +E + A R
Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134
>gi|240145918|ref|ZP_04744519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
L1-82]
gi|257201983|gb|EEV00268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
L1-82]
Length = 435
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + +G V S K E L I+ KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250
Query: 209 IAIHA 213
I H
Sbjct: 251 ICPHF 255
>gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
Length = 442
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q V T +S + ++
Sbjct: 93 SCRNKCMFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEQDIE 142
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
+++ I + + H+ +P+ L++ + F+
Sbjct: 143 DIIR--YRISPIN-ISVHT----TNPE---------LRQR-----MIT-----NRFAGRL 176
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
+ + RLA AGI + Q VL G+ND E+
Sbjct: 177 YSIMERLAEAGITMNCQIVLCPGVNDGKELERT 209
>gi|168213395|ref|ZP_02639020.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens CPE str. F4969]
gi|170715134|gb|EDT27316.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens CPE str. F4969]
Length = 473
Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|168211864|ref|ZP_02637489.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens B str. ATCC 3626]
gi|170710191|gb|EDT22373.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens B str. ATCC 3626]
Length = 473
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|78355553|ref|YP_387002.1| hypothetical protein Dde_0506 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123727796|sp|Q315T9|RIMO_DESDG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|78217958|gb|ABB37307.1| SSU ribosomal protein S12P methylthiotransferase [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 430
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+++ PE +G H P ++ P LK+ C C FC + + G
Sbjct: 105 RDMDAWPEMIGRALGVAVHVPPVRLLSTGPSYAYLKVSDGCGHNCSFCT---IPSIRGGL 161
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILR 179
V + D A A + E+IF D L+ +L L + ++ LR
Sbjct: 162 VSTPADVLEAEAVNLLSRGVKELIFVAQDVAAYGRDMGLRHGLRSLLDRLLPLDGLERLR 221
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVY----IAIHANHPY 217
+ P ++ L++ L++AGKP I + HP
Sbjct: 222 L----MYLYPAGLDAGLLRYLRDAGKPFVPYFDIPVQHAHPD 259
>gi|297244007|ref|ZP_06927897.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8796]
gi|297178785|gb|EFH38030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8796]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|296275048|ref|ZP_06857555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MR1]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|296331307|ref|ZP_06873779.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676293|ref|YP_003867965.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151422|gb|EFG92299.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414537|gb|ADM39656.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 341
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 39/173 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G K +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
PL+ + +++K L I V+ + S +P+ + LKEAG K V I
Sbjct: 81 PLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVY---------AERLKEAGLKRVTI 129
Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248
++ +E + I AG+ + V+ KG+N
Sbjct: 130 SL-----DSLEDERFKKINGRGVSVSKVLEGIEAAKQAGLGVKINMVVQKGVN 177
>gi|258422713|ref|ZP_05685618.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9635]
gi|257847124|gb|EEV71133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9635]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|109157586|pdb|2FB2|A Chain A, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
gi|109157587|pdb|2FB2|B Chain B, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|49484483|ref|YP_041707.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MRSA252]
gi|257423751|ref|ZP_05600180.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257426429|ref|ZP_05602831.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257429068|ref|ZP_05605455.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 68-397]
gi|257431715|ref|ZP_05608078.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus E1410]
gi|257434675|ref|ZP_05610726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M876]
gi|282902170|ref|ZP_06310063.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C160]
gi|282906610|ref|ZP_06314458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282909580|ref|ZP_06317391.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282911828|ref|ZP_06319624.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282915116|ref|ZP_06322893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M899]
gi|282920843|ref|ZP_06328561.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C427]
gi|282925748|ref|ZP_06333396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C101]
gi|283959046|ref|ZP_06376487.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293497520|ref|ZP_06665374.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 58-424]
gi|293511095|ref|ZP_06669792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M809]
gi|293549701|ref|ZP_06672373.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M1015]
gi|295428850|ref|ZP_06821474.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|81650568|sp|Q6GEG6|MOAA_STAAR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|49242612|emb|CAG41333.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272769|gb|EEV04871.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257276060|gb|EEV07511.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257279549|gb|EEV10136.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 68-397]
gi|257282594|gb|EEV12726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus E1410]
gi|257285271|gb|EEV15387.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M876]
gi|282312577|gb|EFB42981.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C101]
gi|282315258|gb|EFB45642.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C427]
gi|282320837|gb|EFB51171.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M899]
gi|282323524|gb|EFB53840.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282326559|gb|EFB56861.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282329509|gb|EFB59030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282596629|gb|EFC01588.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus C160]
gi|283788638|gb|EFC27465.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290918748|gb|EFD95824.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M1015]
gi|291096451|gb|EFE26709.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466082|gb|EFF08611.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus M809]
gi|295127199|gb|EFG56841.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|312437321|gb|ADQ76392.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193523|gb|EFU23919.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS00]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|15925258|ref|NP_372792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50]
gi|156980583|ref|YP_001442842.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu3]
gi|255007046|ref|ZP_05145647.2| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|24211997|sp|Q931G4|MOAA_STAAM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|166217891|sp|A7X5J1|MOAA_STAA1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|14248041|dbj|BAB58430.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722718|dbj|BAF79135.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus Mu3]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQELYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|15927848|ref|NP_375381.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus N315]
gi|21283915|ref|NP_647003.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MW2]
gi|49487049|ref|YP_044270.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650853|ref|YP_187068.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus COL]
gi|87161067|ref|YP_494854.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88196183|ref|YP_501000.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|148268706|ref|YP_001247649.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH9]
gi|150394772|ref|YP_001317447.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH1]
gi|151222380|ref|YP_001333202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|161510463|ref|YP_001576122.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253314609|ref|ZP_04837822.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|253729935|ref|ZP_04864100.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257794612|ref|ZP_05643591.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9781]
gi|258408785|ref|ZP_05681069.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9763]
gi|258422383|ref|ZP_05685295.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9719]
gi|258439773|ref|ZP_05690519.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9299]
gi|258442671|ref|ZP_05691231.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8115]
gi|258446630|ref|ZP_05694785.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6300]
gi|258450252|ref|ZP_05698344.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6224]
gi|258450738|ref|ZP_05698797.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5948]
gi|258455375|ref|ZP_05703335.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5937]
gi|262048529|ref|ZP_06021413.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
D30]
gi|262052284|ref|ZP_06024488.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
930918-3]
gi|269203899|ref|YP_003283168.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED98]
gi|282893707|ref|ZP_06301939.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8117]
gi|282922136|ref|ZP_06329832.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9765]
gi|282926815|ref|ZP_06334442.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A10102]
gi|283767359|ref|ZP_06340274.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus H19]
gi|284025292|ref|ZP_06379690.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 132]
gi|294848805|ref|ZP_06789550.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9754]
gi|295404949|ref|ZP_06814762.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8819]
gi|300910930|ref|ZP_07128380.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH70]
gi|304379453|ref|ZP_07362188.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|54037811|sp|P65389|MOAA_STAAW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|54041471|sp|P65388|MOAA_STAAN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|66773819|sp|P69848|MOAA_STAA8 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81648816|sp|Q6G754|MOAA_STAAS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81693942|sp|Q5HDT9|MOAA_STAAC RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|123722359|sp|Q2FEM4|MOAA_STAA3 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|172049050|sp|A6QJA8|MOAA_STAAE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028696|sp|A6U3Z2|MOAA_STAA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028697|sp|A5IV50|MOAA_STAA9 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028698|sp|A8Z366|MOAA_STAAT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|52695872|pdb|1TV7|A Chain A, Structure Of The S-Adenosylmethionine Dependent Enzyme
Moaa
gi|52695873|pdb|1TV7|B Chain B, Structure Of The S-Adenosylmethionine Dependent Enzyme
Moaa
gi|52695874|pdb|1TV8|A Chain A, Structure Of Moaa In Complex With S-Adenosylmethionine
gi|52695875|pdb|1TV8|B Chain B, Structure Of Moaa In Complex With S-Adenosylmethionine
gi|109157588|pdb|2FB3|A Chain A, Structure Of Moaa In Complex With 5'-Gtp
gi|109157589|pdb|2FB3|B Chain B, Structure Of Moaa In Complex With 5'-Gtp
gi|13702068|dbj|BAB43360.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus N315]
gi|21205357|dbj|BAB96051.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus MW2]
gi|49245492|emb|CAG43969.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285039|gb|AAW37133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus COL]
gi|87127041|gb|ABD21555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87203741|gb|ABD31551.1| molybdopterin cofactor biosynthesis protein A, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147741775|gb|ABQ50073.1| GTP cyclohydrolase subunit MoaA [Staphylococcus aureus subsp.
aureus JH9]
gi|149947224|gb|ABR53160.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus JH1]
gi|150375180|dbj|BAF68440.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160369272|gb|ABX30243.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253726382|gb|EES95111.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257788584|gb|EEV26924.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9781]
gi|257840468|gb|EEV64928.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9763]
gi|257841814|gb|EEV66251.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9719]
gi|257847549|gb|EEV71551.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9299]
gi|257851792|gb|EEV75726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8115]
gi|257854698|gb|EEV77646.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6300]
gi|257856344|gb|EEV79253.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A6224]
gi|257861521|gb|EEV84323.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5948]
gi|257862586|gb|EEV85354.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A5937]
gi|259159803|gb|EEW44843.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
930918-3]
gi|259163387|gb|EEW47945.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
D30]
gi|262076189|gb|ACY12162.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED98]
gi|282591266|gb|EFB96339.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A10102]
gi|282593604|gb|EFB98597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9765]
gi|282763765|gb|EFC03893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8117]
gi|283461238|gb|EFC08322.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus H19]
gi|285817930|gb|ADC38417.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
04-02981]
gi|294824184|gb|EFG40608.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A9754]
gi|294969894|gb|EFG45912.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
A8819]
gi|298695526|gb|ADI98748.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ED133]
gi|300887910|gb|EFK83105.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus TCH70]
gi|304341985|gb|EFM07889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|312830616|emb|CBX35458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129647|gb|EFT85638.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS03]
gi|315198198|gb|EFU28529.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
aureus subsp. aureus CGS01]
gi|329314952|gb|AEB89365.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus T0131]
gi|329723623|gb|EGG60152.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21172]
gi|329730314|gb|EGG66704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21193]
gi|329732017|gb|EGG68372.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
subsp. aureus 21189]
Length = 340
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|325262830|ref|ZP_08129566.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
gi|324031924|gb|EGB93203.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
Length = 440
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 21/149 (14%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E D + PL+ R +K+ C +C +C + + D
Sbjct: 131 EMLDINHTKEYEPLRLSKTGEHTRAYIKVQDGCNQFCSYCIIP--FARGRVRSRAKADVL 188
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + E EV+ TG LS + L +++ + ++ ++ +R S
Sbjct: 189 EEVRRLAEN-GYQEVVLTGI---HLSSYGIDLEETESLLSLIRAVHEVRGIRRIRLGS-- 242
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++P+ I E +Q L K I H
Sbjct: 243 --LEPRIITEEFVQELASLEK---ICPHF 266
>gi|225375407|ref|ZP_03752628.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
16841]
gi|225212743|gb|EEG95097.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
16841]
Length = 438
Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C + +S+D + + E E++ TG
Sbjct: 146 HTRAFIKVQDGCNQFCSYCIIP--FARGRVRSRNSEDVIREVKRLAEH-GFREIVLTGIH 202
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + L +++ + + ++ +R S ++P+ + L K I
Sbjct: 203 LSSYGVDTGDNLLHLIREVHNVDGIERIRLGS----LEPRIVTDGFAAALAGLPK---IC 255
Query: 211 IHA 213
H
Sbjct: 256 PHF 258
>gi|304313911|ref|YP_003849058.1| molybdopterin cofactor biosynthesis protein A [Methanothermobacter
marburgensis str. Marburg]
gi|313104133|sp|Q50746|MOAA_METTM RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|302587370|gb|ADL57745.1| predicted molybdopterin cofactor biosynthesis protein A
[Methanothermobacter marburgensis str. Marburg]
Length = 305
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR P L + + C V C +C R ++ S + +S +D E + + ++
Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+GG+PLI + ++++ + I + + + + +L L++AG +
Sbjct: 64 SGGEPLIRDD--IVEIVEKINSIG-FRDISITTNG------TLLEDLSVPLRDAGLD-RV 113
Query: 210 AIHANHPYEFSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
+ + E I+R AGI + V+L+G+N
Sbjct: 114 NVSFDT---LKPETYRFITRKDYLERVKAGIEGAVMAGLDPVKINMVILRGVN 163
>gi|258645469|ref|ZP_05732938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
15470]
gi|260402822|gb|EEW96369.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
15470]
Length = 447
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 79/233 (33%), Gaps = 77/233 (33%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150
R +K+ C YC FC + L S+ A+ I+ + EV+ T
Sbjct: 152 KTRAFIKIQEGCDNYCTFC-----IIPFARGKLKSRRQSDAVEEIRRLVEKGYREVVLTG 206
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D + L ++ L I + +R S ++ ++ ELI+ ++E
Sbjct: 207 IHLGNYGKD--LHDGTSLSTLVTELVRIPDLLRIRLGS----IESVELSDELIRIIREEP 260
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
K V +H + G +DD IL + R
Sbjct: 261 K-VCPHLHL----------------------------PIQAG-SDD--ILKRMNR----- 283
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
H+R + E ++++ +L+++I GL I+ PG
Sbjct: 284 -----------------HYR--LAEYKELIRNLRKEIPGLALTTDLIVGFPGE 317
>gi|256827193|ref|YP_003151152.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
gi|256583336|gb|ACU94470.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
Length = 409
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 11/123 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTG 151
+P R+ LK+ C C FC + + + A Y + + EV+ TG
Sbjct: 128 FPTRVGLKIQDGCSAACTFCI-VHVARGKAFSRPLPDVLREAHELY---DAGVREVVLTG 183
Query: 152 GD--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ ++ L KV + L I + LR R+ ++P ELI+ L V
Sbjct: 184 INLGTYTSNNANLAKVAQQL--IDEMPKLRV--RISSIEPLHATDELIEVLSRQEGRVCR 239
Query: 210 AIH 212
+H
Sbjct: 240 HLH 242
>gi|307295474|ref|ZP_07575310.1| molybdenum cofactor biosynthesis protein A [Sphingobium
chlorophenolicum L-1]
gi|306878513|gb|EFN09733.1| molybdenum cofactor biosynthesis protein A [Sphingobium
chlorophenolicum L-1]
Length = 341
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 26/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C M K VL+ ++ + + + TGG+PL+
Sbjct: 29 ISVTDRCDLRCRYCMAERMTFLPKDQVLTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 87
Query: 159 HKRLQKVLKTLRY-----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
+ ++ + + V + +R+ + Q L +AG + + +++
Sbjct: 88 D--IVDLVHRIGRHVGKGLDEVTLTTNGTRL---------AQHAQALADAGVRRINVSMD 136
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ P F+ + AG+ + V LKGIN+D
Sbjct: 137 SRDPDRFAHVTRNGDIRLVFEGLEAAQAAGLAVKINMVALKGINED 182
>gi|78043007|ref|YP_359644.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
modifying protein [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995122|gb|ABB14021.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
modifying protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 365
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
P I Y L+L +C + CR C+R S KG ++ K E L +
Sbjct: 13 EPQPDIQEIY-----LELSGLCNLNCRHCYRN--SWSYKGGLMERKTWEKVLEDAKALPL 65
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYI 172
+ ++ G G+PL+ +++++ ++ +
Sbjct: 66 LSRIVLGGIGEPLLHP--EIKEIITNIKAM 93
>gi|42783913|ref|NP_981160.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
gi|42739843|gb|AAS43768.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10987]
Length = 334
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 15 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 74 PLLRKD--LTKLIARLMKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172
>gi|297539312|ref|YP_003675081.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301]
gi|297258659|gb|ADI30504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301]
Length = 456
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 18/124 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
L ++ C YC FC V S+ EA L + ++ + E+ G +
Sbjct: 165 AFLSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEAILTEAAQLAEQGVKEITLLGQNV 219
Query: 155 ----LILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ L +++ + I V+ +RF + P QR LI C K +
Sbjct: 220 NAYRAQYNDLEADLAMLIEYIAEIPQVERIRFTTSHPNEMSQR----LIDCFANIPK-LA 274
Query: 209 IAIH 212
+ +H
Sbjct: 275 VQLH 278
>gi|257125843|ref|YP_003163957.1| radical SAM protein [Leptotrichia buccalis C-1013-b]
gi|257049782|gb|ACV38966.1| Radical SAM domain protein [Leptotrichia buccalis C-1013-b]
Length = 316
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 28/189 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C C FC + S+K + ++ + I K+ ++ FT G+PL
Sbjct: 9 ISLTEKCNYRCFFCHEEGLDMSKKRISKTKEEVYDLIE-IALKNGYNDLTFTDGEPLT-K 66
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYIAIH---- 212
K +Q K L + K + + + ++ EL++C+ + I++H
Sbjct: 67 KKDIQWYFKKLDHKKMYPDITI-----VTNGFLMDDELLECVSKYKGNFKFNISLHSLNP 121
Query: 213 ------------ANHPYEFSEEAIAAISRLANAGIILLS---QSVLLKGINDDPEILANL 257
N + + A + L+ VLLKGIN + + +
Sbjct: 122 EDYEKIICLAENLNSEKVMDVRFKKVVENIRKAKLRNLNIKLNFVLLKGINTGKDKIREI 181
Query: 258 MRTFVELRI 266
+ ++ I
Sbjct: 182 LEFALQNNI 190
>gi|20808722|ref|NP_623893.1| Fe-S oxidoreductase [Thermoanaerobacter tengcongensis MB4]
gi|20517363|gb|AAM25497.1| predicted Fe-S oxidoreductases [Thermoanaerobacter tengcongensis
MB4]
Length = 475
Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGD 153
+++++ + + C C++C+ + + + + Y + I+ + GG+
Sbjct: 86 EKLVIIVTNNCNCRCKYCYANGGSYGLDVNNMKRDEAKNIIDYFVKNFRVIYNIQIFGGE 145
Query: 154 PLILSH--KRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
P++ K + + + LR + I+ + +P E I +K+
Sbjct: 146 PMLNYDVIKVICEYFENLRNNNIIDYMPQFGIVTNGTYLP--------SEAIDIMKKFRF 197
Query: 206 PVYIAI 211
+ I++
Sbjct: 198 NITISL 203
>gi|163783468|ref|ZP_02178459.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
gi|159881232|gb|EDP74745.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
Length = 362
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + E + D + P G++ ++ L + C +YC+ C+ + L
Sbjct: 1 MLRVSEYIRKALSDEPYRPFPGVI------LIWNLTNRCNLYCKHCYSSA--NQETKGEL 52
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPL----------ILSHKRLQKVLKT---LRYIK 173
S + + ++ I +GG+PL IL K ++ L T L
Sbjct: 53 SLDEIRKVADDL-VNEKVRFAILSGGEPLLREDIYDVSAILREKGIKTYLSTNGLLINRD 111
Query: 174 HVQILR 179
+V+++R
Sbjct: 112 NVKLIR 117
>gi|254252868|ref|ZP_04946186.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
AUO158]
gi|124895477|gb|EAY69357.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
AUO158]
Length = 369
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQ-- 121
P+ D + P + GI H PD L + + C C +C RE+
Sbjct: 7 PLADVSGMPDVSGIAHV-PDGALTDTFARPLRDLRISVTDRCNFRCVYCMPREVFDKDYP 65
Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLAHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|88602761|ref|YP_502939.1| radical SAM family protein [Methanospirillum hungatei JF-1]
gi|88188223|gb|ABD41220.1| GTP cyclohydrolase subunit MoaA [Methanospirillum hungatei JF-1]
Length = 292
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ D+ P+ + + + C + C +C R + T LS +D A L
Sbjct: 3 LHDSYGRPISNLR--------ISVNSGCNLRCVYCHREGETKPE--TPLSLEDIRAILD- 51
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
+ I V FTGG+PL+ +++ +R + + + L
Sbjct: 52 VAGNIGIRTVKFTGGEPLLRED-----IVEIIRSVPP------GIESSMTTNGTLLGSLA 100
Query: 198 QCLKEAGK-PVYIAIHANHP---YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGI 247
L++AG V I++ + +P + + + I +AG+ + VLLKGI
Sbjct: 101 HDLRDAGLARVNISLDSLNPETYKSITGTGLLSDVLEGIEAARDAGLTPIKINMVLLKGI 160
Query: 248 N 248
N
Sbjct: 161 N 161
>gi|229093829|ref|ZP_04224927.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
gi|228689562|gb|EEL43371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-42]
Length = 339
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
KIST612]
Length = 318
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + + + + +C + C +C E + + T LS ++ EA + I ++ T
Sbjct: 7 RKVNYLRISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEALVRA-GADMGIDKIRLT 65
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
GG+PL+ L ++K L I ++ + + PE+ LK AG + V I
Sbjct: 66 GGEPLV-RAGVLD-LVKKLGAIPGIRDFAMTTNGI------LLPEMAADLKAAGLRRVNI 117
Query: 210 AIHANHPYEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGINDD 250
++ F E A I+R AGI L +VL+KG NDD
Sbjct: 118 SL-----DTFDPEKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDD 167
>gi|304439005|ref|ZP_07398925.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372494|gb|EFM26080.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 288
Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTG 151
++++ C C FC K +D E Y++E+ V
Sbjct: 17 LIVQATVGCSYNKCDFC------SMYKDDTFHLRDLEELKVEVKEYLEERPFYKRVFIAD 70
Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILR-FHS-RVPIVDPQRINPELIQCLKEAGKPVY 208
GD L LS+ +L + +++++ + + + + + R E ++ L+E G +
Sbjct: 71 GDALCLSNDKLVDLCDFFAKNMENLERITSYATAKDIL----RKTDEELRELREHGIEMV 126
Query: 209 IAIHANHPYEFSEEAIA---------AISRLANAGIIL 237
+ + E ++ A + AGI +
Sbjct: 127 YVGYESGSDEILKDVNKNSTAEEYILATKKAKAAGIKV 164
>gi|281417744|ref|ZP_06248764.1| protein of unknown function DUF512 [Clostridium thermocellum JW20]
gi|281409146|gb|EFB39404.1| protein of unknown function DUF512 [Clostridium thermocellum JW20]
Length = 440
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C FCF ++ + T+ Y ++ + F G+ + L++
Sbjct: 87 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
++ + +K P+ +++H ++P E
Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161
Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
+ + + I RL GI + +Q VL++G+ND E+ L+ L + +
Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221
Query: 267 KP 268
P
Sbjct: 222 VP 223
>gi|256003358|ref|ZP_05428349.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
2360]
gi|255992648|gb|EEU02739.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
2360]
gi|316940219|gb|ADU74253.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
1313]
Length = 440
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C FCF ++ + T+ Y ++ + F G+ + L++
Sbjct: 87 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
++ + +K P+ +++H ++P E
Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161
Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
+ + + I RL GI + +Q VL++G+ND E+ L+ L + +
Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221
Query: 267 KP 268
P
Sbjct: 222 VP 223
>gi|15790256|ref|NP_280080.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
gi|10580720|gb|AAG19560.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
Length = 356
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 57/249 (22%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+P+ P ++ ++ C + C C + LS+ + + L
Sbjct: 1 MTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLTDAAAFG 57
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQC 199
V+ +GGDPL T+ ++H R+ + P + P I+
Sbjct: 58 DGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLTPTAIEA 106
Query: 200 LKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-LSQSVLL 244
L +AG + H EF EA + A + G+ L ++ +V
Sbjct: 107 LADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQVNTTVCA 162
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASL 297
D E L + EL + + + F + + G+ + +
Sbjct: 163 ----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSPARAEEV 208
Query: 298 KEKISGLCQ 306
+ G+ +
Sbjct: 209 MAWLDGVAR 217
>gi|125973540|ref|YP_001037450.1| hypothetical protein Cthe_1025 [Clostridium thermocellum ATCC
27405]
gi|125713765|gb|ABN52257.1| protein of unknown function DUF512 [Clostridium thermocellum ATCC
27405]
Length = 445
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C C FCF ++ + T+ Y ++ + F G+ + L++
Sbjct: 92 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 138
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
++ + +K P+ +++H ++P E
Sbjct: 139 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 166
Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
+ + + I RL GI + +Q VL++G+ND E+ L+ L + +
Sbjct: 167 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 226
Query: 267 KP 268
P
Sbjct: 227 VP 228
>gi|312622597|ref|YP_004024210.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203064|gb|ADQ46391.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 341
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ L + E L I ++ E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INLDEEV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212
+ +K+L+ + ++ +R +R P I+ E + LK I
Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLILLKFYNVRTIELGIQSM 120
Query: 213 ANHPYEF------SEEAIAAISRLANAGIILLSQ 240
+H ++ + A+ + G +L Q
Sbjct: 121 FDHVLNACARGHTAQHSKNAMEMIKKFGFLLGVQ 154
>gi|289423896|ref|ZP_06425689.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
gi|289155673|gb|EFD04345.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
Length = 442
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 40/207 (19%)
Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANL-INPHNPNDPIARQFIPQKEELNILPEERE 75
+ + E+I EI+++ NL + ++ R + + EEL+ +
Sbjct: 79 YSQVSPEEILEIEDV-------------NLVMGTND-----RRTIVDRIEELDSNSKLST 120
Query: 76 --DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + ++ + R +K+ C YC +C + + S++ +
Sbjct: 121 VDDIMKVREFESIEISQNNGKTRAFIKIQDGCDRYCTYC-----IIPYARGRIRSRNIDE 175
Query: 134 ALAYI--QEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPI 186
I + EV+ TG + + +K + I ++ +R S
Sbjct: 176 IREEIITLANNGYKEVVLTGIHVASYGKDLKEDIGILDVIKAVNDIDGIERIRLSS---- 231
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
V+P E I + + K + H
Sbjct: 232 VEPVLFTDEFIDEICKIDK---LVPHF 255
>gi|229159568|ref|ZP_04287582.1| dehydrogenase [Bacillus cereus R309803]
gi|228623870|gb|EEK80682.1| dehydrogenase [Bacillus cereus R309803]
Length = 375
Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|229171266|ref|ZP_04298856.1| dehydrogenase [Bacillus cereus MM3]
gi|228612223|gb|EEK69455.1| dehydrogenase [Bacillus cereus MM3]
Length = 375
Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|308069953|ref|YP_003871558.1| hypothetical protein PPE_03202 [Paenibacillus polymyxa E681]
gi|305859232|gb|ADM71020.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 447
Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 60/145 (41%), Gaps = 23/145 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C +C FC G + S+D + +A ++ + E++ TG
Sbjct: 143 HTRAFLKIQDGCNNFCTFCIIPWSRG-----LSRSRDAASIIAQARQLVHAGYKEIVLTG 197
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD + + L +L L ++ ++ +R S ++ +I+ +++ L + K
Sbjct: 198 IHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDVLNRSTK 251
Query: 206 PVYIAIHANHPYEF-SEEAIAAISR 229
+ H + P + + + + R
Sbjct: 252 ---LVRHFHIPLQAGDDTVLKRMRR 273
>gi|170756026|ref|YP_001782588.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
gi|169121238|gb|ACA45074.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
Okra]
Length = 432
Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|153939005|ref|YP_001392232.1| RNA modification protein [Clostridium botulinum F str. Langeland]
gi|152934901|gb|ABS40399.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
Langeland]
gi|295320230|gb|ADG00608.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
230613]
Length = 432
Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
Length = 444
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 42/169 (24%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ H C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 83 LMDEYHSCCNKCMFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 129
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ R + + +++++H + NPEL + L H
Sbjct: 130 TNMRDKDI---------ERVIKYHLSPINISVHTTNPELRCKML-----------H---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
F+ + + I R AGI + SQ VL +G+ND L RT +L
Sbjct: 166 NRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLND----EEELDRTISDLG 210
>gi|320115265|ref|YP_004185424.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|319928356|gb|ADV79041.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 327
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ + C C FC VG + + D + + +++ + + + TGG+PLI
Sbjct: 4 VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 57
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
K L +++ L+ H ++ + + + I+ + I+ LKE+ V I
Sbjct: 58 -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 109
Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245
H +E + A I+ L N GI L + L K
Sbjct: 110 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 149
>gi|229022012|ref|ZP_04178568.1| dehydrogenase [Bacillus cereus AH1272]
gi|228739268|gb|EEL89708.1| dehydrogenase [Bacillus cereus AH1272]
Length = 369
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 28 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 84 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133
Query: 215 H 215
H
Sbjct: 134 H 134
>gi|163939949|ref|YP_001644833.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
gi|163862146|gb|ABY43205.1| molybdenum cofactor biosynthesis protein A [Bacillus
weihenstephanensis KBAB4]
Length = 337
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARSLKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|167036843|ref|YP_001664421.1| radical SAM domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166855677|gb|ABY94085.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 338
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ + C C FC VG + + D + + +++ + + + TGG+PLI
Sbjct: 15 VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 68
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
K L +++ L+ H ++ + + + I+ + I+ LKE+ V I
Sbjct: 69 -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 120
Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245
H +E + A I+ L N GI L + L K
Sbjct: 121 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 160
>gi|258542214|ref|YP_003187647.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-01]
gi|256633292|dbj|BAH99267.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-01]
gi|256636351|dbj|BAI02320.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-03]
gi|256639404|dbj|BAI05366.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-07]
gi|256642460|dbj|BAI08415.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-22]
gi|256645515|dbj|BAI11463.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-26]
gi|256648568|dbj|BAI14509.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-32]
gi|256651621|dbj|BAI17555.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654612|dbj|BAI20539.1| molybdenum cofactor biosynthesis protein A [Acetobacter
pasteurianus IFO 3283-12]
Length = 338
Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 37/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C M + VL+ + + + + TGG+PL+
Sbjct: 18 VSVTDRCDMRCTYCMAERMTFLPRSDVLNYDELLRLCRVFVQH-GVRRLRITGGEPLVRR 76
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHS-----------------RVPIVDPQRINPEL 196
+ L LK ++ L + R V ++
Sbjct: 77 DIGPFFQELGSWLKHSDNRGQLEELTLTTNGSHLAQYAQTLFDAGVRRVNVSLDTLDEAR 136
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ GK + I + G+ L +V + G+NDD
Sbjct: 137 FAKITRRGK--------------LAATLEGIRAARDVGLALRINTVAMAGVNDD 176
>gi|294791673|ref|ZP_06756821.1| radical SAM domain protein [Veillonella sp. 6_1_27]
gi|294456903|gb|EFG25265.1| radical SAM domain protein [Veillonella sp. 6_1_27]
Length = 391
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
CP C FC + + G + L+ + + + Y+ + + WEV F GG
Sbjct: 5 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63
Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
K LQ +L + + +R +R P + E I L+ G K V +
Sbjct: 64 TAITKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118
Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + H + E + A++RL + + + Q LL G
Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160
>gi|284048503|ref|YP_003398842.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952724|gb|ADB47527.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
Length = 292
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDP 154
L++ C CRFC +V + L I++ ++ + G DP
Sbjct: 17 CFLQVTSGCSHNKCRFCT---FYKEAPFSVSPESEIREDLQEIRDSGWKVKRIFLQGADP 73
Query: 155 LILSHKRLQKVLK 167
+LS+ RL++++
Sbjct: 74 FLLSYDRLKRIMD 86
>gi|218887708|ref|YP_002437029.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218758662|gb|ACL09561.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 427
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 40/188 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
R+ + + C + C +C R+ ++ ++S AL Y + +I +
Sbjct: 23 GRVHVPVAPRCNIQCGYCNRKYDCVNESRPGVTSAVLSPRQALDYVDKVLAADPRITVIG 82
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G GDP+ + L+ + L + +H ++L S + P + LKE G
Sbjct: 83 IAGPGDPMANPAETLETL--RLVHERHPELLFCLSSNGLGLP-----PHLDRLKELGVTH 135
Query: 208 YIAIHANHP---------------------YEFSEEAIAA----ISRLANAGIILLSQSV 242
N E +E +A + L G+++ ++
Sbjct: 136 VTVT-INAVDPAIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTI 194
Query: 243 LLKGINDD 250
L+ G+ND
Sbjct: 195 LVPGVNDR 202
>gi|159901008|ref|YP_001547255.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
ATCC 23779]
gi|238066313|sp|A9AZS3|RIMO_HERA2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|159894047|gb|ABX07127.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
ATCC 23779]
Length = 469
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 32/189 (16%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
L++ P D +G I LK+ C + C FC G +
Sbjct: 141 LSLTPAATGDSLGAYGDWRTTAITRNKRGPSAYLKISDGCNLRCAFCTIPSFKGDMRSKA 200
Query: 126 L------SSKDTEAALAYI---QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHV 175
+ + + EA + I + + G D L + L +L+ L +
Sbjct: 201 VGSILGEARELVEAGVQEIILVAQH-----LTDYGRD-LGMKQNGLGVLLEELAAVVPAD 254
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEF--------SEEAI 224
+ +R PQ + P+L++ + V + + HP +++
Sbjct: 255 RWIRL----MYAYPQSVTPDLVETMARLPQLCHYVDMPLQHAHPDTLRRMRRPPDTDKTK 310
Query: 225 AAISRLANA 233
A ++ L A
Sbjct: 311 AIVNSLRQA 319
>gi|229114076|ref|ZP_04243501.1| dehydrogenase [Bacillus cereus Rock1-3]
gi|228669346|gb|EEL24763.1| dehydrogenase [Bacillus cereus Rock1-3]
Length = 375
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|86143254|ref|ZP_01061656.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
blandensis MED217]
gi|85830159|gb|EAQ48619.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
blandensis MED217]
Length = 335
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 22/189 (11%)
Query: 90 VH-RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
H R + + + L C + C +C + + S + ++S+++ EA E + ++
Sbjct: 11 THGRKHNYLRISLSEKCNLRCTYCMPHDGIPLSPRANLMSAEEIEAFAKVFVEN-GVDKI 69
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
TGG+PL+ +LK L + V+ L + + I K+ G K
Sbjct: 70 RLTGGEPLVRKD--FSDILKRLAKLP-VK-LSITTNAL------LTHRFIADFKKYGLKD 119
Query: 207 VYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ +++ + + +F+ I +L G + +VL+K N+D + +
Sbjct: 120 INVSLDSLNAEKFNFITRRDQYKKAFTNIEQLIKEGFNVKINAVLMKNFNEDEIVEFIKL 179
Query: 259 RTFVELRIK 267
++ ++
Sbjct: 180 TRERDINVR 188
>gi|299144166|ref|ZP_07037246.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518651|gb|EFI42390.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 435
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 28/130 (21%)
Query: 95 DRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R +K+ C YC +C R + ++ A Y E+I T
Sbjct: 145 TRAYIKVQDGCNRYCTYCIIPFARGNIRSRSIEDSMNEARKLAKAGY-------KEIILT 197
Query: 151 G-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +RL +++ + I ++ +R S ++P+ I + ++ +
Sbjct: 198 GIHIGSYGYD---IGKERLIDLIENIASIDGIERIRLSS----IEPRTITDDFMKRVVAT 250
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 251 NK---LCDHF 257
>gi|228989607|ref|ZP_04149591.1| dehydrogenase [Bacillus pseudomycoides DSM 12442]
gi|228995795|ref|ZP_04155455.1| dehydrogenase [Bacillus mycoides Rock3-17]
gi|229003415|ref|ZP_04161235.1| dehydrogenase [Bacillus mycoides Rock1-4]
gi|228757793|gb|EEM07018.1| dehydrogenase [Bacillus mycoides Rock1-4]
gi|228763956|gb|EEM12843.1| dehydrogenase [Bacillus mycoides Rock3-17]
gi|228770144|gb|EEM18724.1| dehydrogenase [Bacillus pseudomycoides DSM 12442]
Length = 410
Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 69 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 124
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 125 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 174
Query: 215 H 215
H
Sbjct: 175 H 175
>gi|282917614|ref|ZP_06325366.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
[Staphylococcus aureus subsp. aureus D139]
gi|282318576|gb|EFB48934.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
[Staphylococcus aureus subsp. aureus D139]
Length = 217
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P
Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
L+ L ++ L I ++ + R V I+ L
Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
Q + + + I + G+ + V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175
>gi|288942731|ref|YP_003444971.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
vinosum DSM 180]
gi|288898103|gb|ADC63939.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
vinosum DSM 180]
Length = 500
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 65/221 (29%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
+N P ED H Y R+ + + C + C +C R+ G
Sbjct: 35 VNNHPCFSEDA------------HHHYA-RMHVAVAPACNIQCHYCNRKYDCANESRPGV 81
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQ---------------- 163
+ + + LA Q+ + G GDPL + L+
Sbjct: 82 VSELLTPDQAVKKVLAVAAAIPQMTVLGIAGPGDPLANPERTLETFRQLAEKAPDIRLCV 141
Query: 164 --------KVLKTLRY--IKHVQILRFHSRVPIVDP---QRINPELI--QCLKEAGKPVY 208
++ L I+HV + + VDP +I P + + K
Sbjct: 142 STNGLALPDLVDELCQYNIEHV-TITIN----CVDPDVGAKIYPWIFWNNRRIKGRKAAE 196
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
I + +L G+++ SVL+ G+ND
Sbjct: 197 I---------LIRRQQEGLEKLVARGVLVKVNSVLIPGVND 228
>gi|319954255|ref|YP_004165522.1| gtp cyclohydrolase subunit moaa [Cellulophaga algicola DSM 14237]
gi|319422915|gb|ADV50024.1| GTP cyclohydrolase subunit MoaA [Cellulophaga algicola DSM 14237]
Length = 327
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C E + ++ + + + L+ I I ++ TGG+P +
Sbjct: 15 LAVTDRCNLRCNYCMPSEGIDFAENDKLFTIDELIR-LSQILITQGITKIRITGGEPFVR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
L +L+ L I ++ + + ++ P I LK G K + +++ A
Sbjct: 74 KD--LMVLLRELSKIDALEDISITTNATVIGPY------ISELKALGIKNINVSLDA--- 122
Query: 217 YEFSEEAIAAISRLAN 232
+++ I+R
Sbjct: 123 --ITKDVFEKITRRKQ 136
>gi|296132280|ref|YP_003639527.1| molybdenum cofactor biosynthesis protein A [Thermincola sp. JR]
gi|296030858|gb|ADG81626.1| molybdenum cofactor biosynthesis protein A [Thermincola potens JR]
Length = 326
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 24/165 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C +C E V + +LS ++ + K I ++ TGG+PL+
Sbjct: 14 VSVTDRCNYRCVYCMPAEGVPMHCRDEILSLEEILKVIKS-STKLGIRKIRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
K + +++ + I + + + + P LKEAG K V I++ P
Sbjct: 72 -RKGIINLVQGIARIPQIDDIALTTNG-ALLPA-----YATALKEAGLKRVNISLDTLKP 124
Query: 217 YEFSEEAIAAISRLAN--AGI---------ILLSQSVLLKGINDD 250
F + + RL + AGI + +V+++G NDD
Sbjct: 125 DRFRQITR--VGRLQDVWAGIEAAWEEGFEPVKINTVVIRGFNDD 167
>gi|270294216|ref|ZP_06200418.1| radical SAM domain-containing protein [Bacteroides sp. D20]
gi|270275683|gb|EFA21543.1| radical SAM domain-containing protein [Bacteroides sp. D20]
Length = 292
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D++ + + + C C FC + V++ + + + Y++ +I E+ F+GG+P
Sbjct: 8 DKLRILVTNGCNYRCPFCHNEGQTSKDRFNVMNLDNFKLLIDYLK-DEEISEITFSGGEP 66
Query: 155 LILSH 159
+ +
Sbjct: 67 FLNPN 71
>gi|229074347|ref|ZP_04207385.1| dehydrogenase [Bacillus cereus Rock4-18]
gi|229095122|ref|ZP_04226117.1| dehydrogenase [Bacillus cereus Rock3-29]
gi|229101224|ref|ZP_04231988.1| dehydrogenase [Bacillus cereus Rock3-28]
gi|228682192|gb|EEL36305.1| dehydrogenase [Bacillus cereus Rock3-28]
gi|228688307|gb|EEL42190.1| dehydrogenase [Bacillus cereus Rock3-29]
gi|228708789|gb|EEL60924.1| dehydrogenase [Bacillus cereus Rock4-18]
Length = 375
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|149907724|ref|ZP_01896471.1| radical SAM domain protein [Moritella sp. PE36]
gi|149809394|gb|EDM69323.1| radical SAM domain protein [Moritella sp. PE36]
Length = 295
Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSK--DTEA-ALAYIQEKSQIWEVIFTGG 152
++L++ + C C FC +M + + K D EA L+ + + V G
Sbjct: 19 LILQVANGCSWNNCTFC---DMYTQPQKKFRAKKIADIEAEILSVVASGQKHQRVFLADG 75
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D + L KRL+++L +R + HVQ +
Sbjct: 76 DAMTLPFKRLKEILLLIRKHMPHVQRV 102
>gi|332298374|ref|YP_004440296.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
gi|332181477|gb|AEE17165.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
Length = 515
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 23/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C R + + ++ ++ E + I+ ++Q EV+ TG +
Sbjct: 188 HSRASIKIQDGCNNACTYC-RIHLARGKAVSLDAASVLER-VRSIEARNQ-HEVVLTGVN 244
Query: 154 ---------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L + L + + + +RF R+ + P+R++ L + +
Sbjct: 245 LSQYRGSFGSFFLDIAGLLRFL-----LDNTERIRF--RLSSLYPERVDDALCEVIAHER 297
Query: 205 KPVYIAIHA 213
I H
Sbjct: 298 ----IMPHF 302
>gi|304403939|ref|ZP_07385601.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
YK9]
gi|304346917|gb|EFM12749.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
YK9]
Length = 464
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 38/168 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C FC G + S E + + E++ TG
Sbjct: 143 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSVIAQAEQLVE-----AGYKEIVLTG 197
Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD L + RL +L L ++ ++ +R S ++ +I+ ++I L + K
Sbjct: 198 IHTGGYGD--DLENYRLSDLLWDLDKVEGLERIRISS----IEASQIDDKMIDVLNRSSK 251
Query: 206 PVYIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237
+ +H P + + E + L A G+ +
Sbjct: 252 -MCRHLHI--PLQAGEDAVLKRMRRKYTTAEFAEKVKMLHRAMPGVAI 296
>gi|229083725|ref|ZP_04216046.1| dehydrogenase [Bacillus cereus Rock3-44]
gi|228699583|gb|EEL52247.1| dehydrogenase [Bacillus cereus Rock3-44]
Length = 375
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
DSM 2588]
Length = 326
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 32/175 (18%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
VH Y + + L C + C +C E + L D A LA I + + ++
Sbjct: 9 VHDY---LRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRL 65
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL-----RFHSRVPIVDPQRINPELIQCLKEAG 204
TGG+PL+ K++ +L + + R H E L+EAG
Sbjct: 66 TGGEPLVRKDA--AKIILSLSRLPVELTMTTNGARLH-------------EFADVLEEAG 110
Query: 205 ---KPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + + + I L N GI + V++KG+ND+
Sbjct: 111 IRSLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165
>gi|163938411|ref|YP_001643295.1| YfkB-like domain-containing protein [Bacillus weihenstephanensis
KBAB4]
gi|229009905|ref|ZP_04167124.1| dehydrogenase [Bacillus mycoides DSM 2048]
gi|163860608|gb|ABY41667.1| YfkB-like domain protein [Bacillus weihenstephanensis KBAB4]
gi|228751336|gb|EEM01143.1| dehydrogenase [Bacillus mycoides DSM 2048]
Length = 375
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|307565379|ref|ZP_07627870.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
gi|307345911|gb|EFN91257.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
Length = 452
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + + S K E A+A E++ TG
Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPPIKSLVKQAEEAVA-----EGGREIVLTG 212
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD +++ ++K L +K ++ R S ++P I+ +LI+ +
Sbjct: 213 VNIGDFGRTTNESFLDLVKALDNVKGIERYRISS----LEPDLIDDDLIEYCATSEH--- 265
Query: 209 IAIHA 213
H
Sbjct: 266 FMPHF 270
>gi|227485372|ref|ZP_03915688.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
51172]
gi|227236663|gb|EEI86678.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
51172]
Length = 472
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +ED + + K + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKDLKHKFYANRIVLFAPLYLSNYCVNGCVYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
S LS ++ + + +Q++ + G DP+ + + + T+ IKH
Sbjct: 111 NRSIPRKKLSQEEIKEQVIALQDQGHKRLALEAGEDPINNPIDYILESIHTIYNIKH 167
>gi|168211168|ref|ZP_02636793.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
3626]
gi|169344594|ref|ZP_02865560.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
gi|169297204|gb|EDS79316.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
gi|170710824|gb|EDT23006.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
3626]
Length = 418
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 64 KEELNILPEEREDPIGDNNHSPL---KGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVG 119
KEEL + E+ I + KG + L L C + C +C++ + +
Sbjct: 47 KEELKSMGFSLENNINEIELMKCTLNKGKFSEKSMTLFLSLTRQCNLNCSYCYQDKRKMM 106
Query: 120 SQKGTVLSSKDTEAALAYIQEKS-QIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKH 174
++ + L+ D ++++KS + E+ T GG+PL L+ + +++ L +K+
Sbjct: 107 DKENSFLNKNDWFKIFEFLKKKSVNLNELHITLFGGEPL-LNKSIILQIIDDLNSLKN 163
>gi|196043992|ref|ZP_03111229.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225866714|ref|YP_002752092.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
gi|196025328|gb|EDX63998.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB108]
gi|225787425|gb|ACO27642.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
03BB102]
Length = 337
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|118479860|ref|YP_897011.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
str. Al Hakam]
gi|118419085|gb|ABK87504.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
Hakam]
Length = 339
Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|226227077|ref|YP_002761183.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca
T-27]
gi|226090268|dbj|BAH38713.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca
T-27]
Length = 323
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 21/173 (12%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C E + KG +L ++ + + + + TGG+P I
Sbjct: 14 ISVTDRCNFRCQYCMPVEGLPWLPKGDILRYEEIADIVGQLAPM-GLKRLRITGGEPTI- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
L ++++ LR I ++ + + + PQ + L EAG V I+ + P
Sbjct: 72 -RPELPRLIRMLRDIPGIEDIALSTNG-VKLPQ-----MSDALAEAGLHRVNISADSLRP 124
Query: 217 YEFSEEAIA--------AISRLANAGI-ILLSQSVLLKGINDD-PEILANLMR 259
A A AGI + V+++GINDD A L R
Sbjct: 125 DRVVAIARRDLGFDLKTAALAAERAGIGPIKINVVVMRGINDDEVADFAALTR 177
>gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
Length = 426
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
+R+ LK+ C C +C G + + + A + E+I TG
Sbjct: 136 DERVNLKIQDGCDNTCSYCLVTIARGPSR--SIKMEHVLETAAELAHT--FDEIILTGVH 191
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L ++++ L I H+ LR S ++P I+ ++ L +
Sbjct: 192 IGSYGKD--LAEPSSLGRLMERLLEIPHLGRLRLSS----IEPAEIDETILGLL--SHPK 243
Query: 207 VYIAIHAN 214
+ +H +
Sbjct: 244 LCRHLHIS 251
>gi|228917377|ref|ZP_04080930.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842304|gb|EEM87399.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|229124294|ref|ZP_04253485.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
gi|228659195|gb|EEL14844.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
95/8201]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|170758363|ref|YP_001788268.1| RNA modification protein [Clostridium botulinum A3 str. Loch Maree]
gi|169405352|gb|ACA53763.1| RNA modification enzyme, MiaB family [Clostridium botulinum A3 str.
Loch Maree]
Length = 432
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 23/134 (17%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+ Y D R LK+ C +C +C F R V S+K + ++ + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKPEKI-MEEVQK----LSKH-GF 188
Query: 145 WEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E+I +G D L +L+ + ++ +Q +R S +DP E I
Sbjct: 189 KEIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIQRIRIGS----IDPTFFTEEEIMR 244
Query: 200 LKEAGKPVYIAIHA 213
+ + + H
Sbjct: 245 ISKLKR---FCPHF 255
>gi|196040891|ref|ZP_03108189.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|301056234|ref|YP_003794445.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
gi|196028345|gb|EDX66954.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
NVH0597-99]
gi|300378403|gb|ADK07307.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
anthracis str. CI]
Length = 337
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|167633892|ref|ZP_02392215.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170685934|ref|ZP_02877157.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
gi|254687534|ref|ZP_05151390.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
CNEVA-9066]
gi|254725099|ref|ZP_05186882.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A1055]
gi|254741872|ref|ZP_05199559.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Kruger B]
gi|167530693|gb|EDR93395.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0442]
gi|170670398|gb|EDT21138.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
A0465]
Length = 337
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|196032982|ref|ZP_03100395.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|218905955|ref|YP_002453789.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
gi|195994411|gb|EDX58366.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
gi|218538708|gb|ACK91106.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
Length = 337
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|153816459|ref|ZP_01969127.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
gi|331087554|ref|ZP_08336485.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846201|gb|EDK23119.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
gi|330400694|gb|EGG80298.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 483
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ I + D I ++ S +YP + + ++ C +C +C +
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216
Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174
S+D +A + I+ ++ + EV+ G + P+ ++L+ + I
Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ +RF + P+ ++ ELI+ + ++ K + +H
Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304
>gi|77919453|ref|YP_357268.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
DSM 2380]
gi|77545536|gb|ABA89098.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
DSM 2380]
Length = 432
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 16/142 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFT-- 150
R +++ + C +C +C G + + L + + + +I
Sbjct: 138 RSRAFVQIQNGCNAFCSYCIIPHARGPSR-SALPQQVVDQVCKFCTAGFPEIVLTGIHIG 196
Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D + L +++ L V LR S ++PQ ++ ELI + +
Sbjct: 197 GYGND--LQPPLSLADLVRRLLDDTQVSRLRLGS----IEPQEVSMELIDLVAHCER--- 247
Query: 209 IAIHANHPYEF-SEEAIAAISR 229
+ H + P + + + A++R
Sbjct: 248 LCPHFHIPLQAGDDAVLKAMNR 269
>gi|49478739|ref|YP_038771.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228936036|ref|ZP_04098846.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|49330295|gb|AAT60941.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228823804|gb|EEM69626.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|52140778|ref|YP_086052.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
gi|51974247|gb|AAU15797.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
Length = 337
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|306821751|ref|ZP_07455347.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550220|gb|EFM38215.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 145
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ L L C + C +C + V QK ++S + Y+ + I + TGG+P
Sbjct: 12 VRLSLTDRCNLNCVYCMPKGQSPVFLQKDEIMSVDEIYKICLYLSK-IGIDTIKLTGGEP 70
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRV 184
L+ ++V+K ++ I ++ + +R+
Sbjct: 71 LLRED--FEEVVKKIKTIDEIKNITLTTNGTRL 101
>gi|229013933|ref|ZP_04171059.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
2048]
gi|228747353|gb|EEL97230.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
2048]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K+++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229062411|ref|ZP_04199727.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
gi|228716882|gb|EEL68569.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K+++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229135567|ref|ZP_04264350.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
gi|228647909|gb|EEL03961.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST196]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K+++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229169460|ref|ZP_04297166.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
gi|228614018|gb|EEK71137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
Length = 339
Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C + C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K+++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ + I AG+ + V+ KG+ND
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177
>gi|294501748|ref|YP_003565448.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
B1551]
gi|294351685|gb|ADE72014.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
B1551]
Length = 338
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C CR+C E+ G+ +LS + E + + +V TGG+
Sbjct: 18 LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTR-LFALLGVKKVRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
PL+ K L ++ L+ I+ + + +
Sbjct: 77 PLL--RKGLPDLINRLKQIEGIDDIAITT 103
>gi|229056258|ref|ZP_04195679.1| dehydrogenase [Bacillus cereus AH603]
gi|229165420|ref|ZP_04293204.1| dehydrogenase [Bacillus cereus AH621]
gi|228618018|gb|EEK75059.1| dehydrogenase [Bacillus cereus AH621]
gi|228721063|gb|EEL72601.1| dehydrogenase [Bacillus cereus AH603]
Length = 369
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L I + + TGG+P +
Sbjct: 28 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 84 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133
Query: 215 H 215
H
Sbjct: 134 H 134
>gi|145631425|ref|ZP_01787195.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
gi|144982962|gb|EDJ90471.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
Length = 41
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
++ E +I +L+ SG P ++ G K
Sbjct: 2 ISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 37
>gi|119962194|ref|YP_947341.1| molybdenum cofactor biosynthesis protein A [Arthrobacter aurescens
TC1]
gi|119949053|gb|ABM07964.1| molybdopterin cofactor synthesis protein A [Arthrobacter aurescens
TC1]
Length = 379
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 36/190 (18%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ RY R L L C + C +C E + K V++ + +
Sbjct: 36 GLWDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLSKQAVMTKDEIVRIVRVGVNALG 95
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
+ E+ TGG+PL+ + L +++ +R H P + +
Sbjct: 96 VRELRLTGGEPLVRAD--LVEIIAGIRS-DHPD-----------LPISMTTNGVGLDKKA 141
Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
Q LK AG + +++ + H F++ AG+ + +VL++GI
Sbjct: 142 QALKAAGLTRINVSLDSLHEETFTKLTRRPFLDRVLAGVDAAWAAGLGPVKLNAVLMRGI 201
Query: 248 ND--DPEILA 255
ND P++LA
Sbjct: 202 NDAESPDLLA 211
>gi|154504516|ref|ZP_02041254.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
gi|153794998|gb|EDN77418.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
Length = 430
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R +K+ C +C +C G + + +D A + + + EV+ TG
Sbjct: 142 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSR--AKEDVVAEVTDLAKN-GYQEVVLTGIH 198
Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + L +++ + I+ ++ +R S ++P+ I E +Q + K
Sbjct: 199 LSSYGID--FENEDNLLSLIRAVHEIEGIKRIRLGS----LEPRIITEEFVQAIAALPK- 251
Query: 207 VYIAIHA 213
+ H
Sbjct: 252 --MCPHF 256
>gi|328766119|gb|EGF76180.1| hypothetical protein BATDEDRAFT_28746 [Batrachochytrium dendrobatidis
JAM81]
Length = 1450
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 57/316 (18%), Positives = 114/316 (36%), Gaps = 77/316 (24%)
Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-----LK 100
LI+ P D +A Q ++L I IG + L H Y RI+ +
Sbjct: 1085 LISKSAPTD-LALQ---LADDLGITA------IGFARGNRLNIYTHPY--RIIEANLRIS 1132
Query: 101 LLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ C C +C F R+ V K +LS ++ E E I ++ TGG+PL
Sbjct: 1133 VIDRCNFRCTYCMPKEIFGRDFVFMPKDQLLSFEEIERLAKNFVE-LGIRKIRLTGGEPL 1191
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPELI 197
+ L +++ L +K ++ + + R+ + ++ +
Sbjct: 1192 LRRD--LPILIERLTRMKDLEDIALTTNGSLLGALASKLKDAGLDRINVSL-DALDDAIF 1248
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + ++G P + I + G+ + V+ KG+ND + +
Sbjct: 1249 KKINDSGVG---------PERI----LRGIKKAHAVGLEVKVNMVVKKGMNDS--QIVPM 1293
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGG 316
F E I Y+ D T+ + + + ++I+ LK + L+
Sbjct: 1294 ANYFKENGITLRYIEFMD-VGQTNGWDFSKVITKKEIIEKLKGN--------FALE---- 1340
Query: 317 YGKVKIDTHNIKKVGN 332
++ + I +V
Sbjct: 1341 ----PVEPNYIGEVAK 1352
>gi|304406819|ref|ZP_07388474.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
curdlanolyticus YK9]
gi|304344352|gb|EFM10191.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
curdlanolyticus YK9]
Length = 333
Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y + + + C + C +C E V +LS + + +
Sbjct: 9 GRVHNY---LRISVTDRCNLRCVYCMPEEGVQFTDTSNLLSYDHIVELVQS-AASLGVTK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ TGG+PL+ L ++ L I + + + ++ Q + L+ AG
Sbjct: 65 LRITGGEPLV--RPGLDGLISRLSRIPGISDIALTTNGLLLAQQ------AEALRAAGLN 116
Query: 207 -VYIAIHANHPYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDD 250
V I++ F E + + AG + VLL+G+N+D
Sbjct: 117 RVNISLDTLDSTRFKFIARRGELRRVMEGIEAAGRVGFDPIKLNCVLLRGVNED 170
>gi|313226405|emb|CBY21549.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + CR+C E V + +LS+++ + + + + + ++ TGG+PL+
Sbjct: 25 ISLTEKCNLRCRYCMPIEGVKLTPSDQLLSAQELYRFSSLLVKNAGVQKIRLTGGEPLV- 83
Query: 158 SHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY------- 208
+ +Q+++ L + V+ + + + ++ + L++AG
Sbjct: 84 -RREIQEIISDLNSLRDDGVKQIGITTNGVALSKRK-----AKRLRDAGLDTANISLDTL 137
Query: 209 --IAIHANHPYE--FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + AI +AGI VL +G+NDD
Sbjct: 138 EPMKAEFITRRSKDMHYSVMKAIENSIDAGITTKINCVLQRGLNDD 183
>gi|281357638|ref|ZP_06244125.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
gi|281315895|gb|EFA99921.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
Length = 482
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 42/225 (18%)
Query: 95 DRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIF 149
+R+L ++ +C C +C T L +E A + I++ +++ +V+
Sbjct: 21 NRLLSIEIEFNRLCNYRCPYC-----YAGDPETELPEMSSELADSVIRQAAELGARKVVI 75
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GG+PL+ L++ ++ + + +I ++ + V
Sbjct: 76 LGGEPLLYP--ELERKIELVNSLGMGAEIFTNG--------ALLDEAAARMFAAHNCRVV 125
Query: 209 IAIHANHPY---------EFSEEAIAAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256
+ +++ P E E A A+ L AG + + SV+ +++ + +
Sbjct: 126 VKLNSLDPAVQARMTGEPEALELAQRALRLLREAGCGAGRVAASSVI---CSENVDGMPA 182
Query: 257 LMRTFVELRIKPYYLHHPDLAAG----TSHFRLTIEEGQKIVASL 297
L R E I PY G H + +++ +
Sbjct: 183 LWRYLREREILPY--FEMMTPQGRMLENRHLMVEPARLRQVFEEI 225
>gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma
proteobacterium HTCC2207]
Length = 336
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C EM K +LS ++ A E I ++ TGG+PLI
Sbjct: 25 LSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVE-LGIRKIRLTGGEPLIRR 83
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYI-AIHAN 214
+ K++ +L + + L + + P + Q LK+ + + + ++ A
Sbjct: 84 D--ILKLVSSLSALPGLDELTMTTNGL------LLPTMAQPLKDAGISRLNISVDSLKAE 135
Query: 215 HPYEFS--EEAIAAISRLANAGII----LLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ + + + + A + + +V+L G NDD + +L R V+ +
Sbjct: 136 RFKQLTRVGDLSQVLEGIHAANAVGFGKIKLNAVILAGFNDD--EVIDLARFAVDNGM 191
>gi|308070036|ref|YP_003871641.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
E681]
gi|305859315|gb|ADM71103.1| Molybdenum cofactor biosynthesis protein A (narA protein)
[Paenibacillus polymyxa E681]
Length = 337
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C CR+C E+ G K +L+ ++ L+ I + ++ TGG+
Sbjct: 18 ISVIDRCNFRCRYCMPEEIFGHDYPFLPKEKILTFEEITR-LSRIFVSLGVTKLRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L ++ +L + V+ + + + P + L+EAG K V +++
Sbjct: 77 PLLRKD--LSLLIHSLTQLDGVEDIAMTTNG-VFLP-----KYAVALREAGLKRVTVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
N + + I A AG+ + V+ KG ND D +A+ +
Sbjct: 129 SLDDDRFRQMNGGRSSVKAVLDGIEAAAQAGMQVKINMVVQKGFNDQDIVPMADYFQK 186
>gi|115376179|ref|ZP_01463422.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115366829|gb|EAU65821.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%)
Query: 86 LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
L + +Y R + + C C++C V + ++ + + AL
Sbjct: 40 LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 99
Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ + ++ F GG+PL L+ ++ V++ + + L+F V + R+
Sbjct: 100 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 155
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240
+ E++ K+ G ++++ + P + I R A L Q
Sbjct: 156 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 210
Query: 241 SV 242
+V
Sbjct: 211 AV 212
>gi|83589922|ref|YP_429931.1| hypothetical protein Moth_1074 [Moorella thermoacetica ATCC 39073]
gi|123752930|sp|Q2RJK1|RIMO_MOOTA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|83572836|gb|ABC19388.1| SSU ribosomal protein S12P methylthiotransferase [Moorella
thermoacetica ATCC 39073]
Length = 432
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152
LK+ C C +C + G + L EA + ++ + G
Sbjct: 143 AYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSLAARGIKELVLVAQDTTAYGL 202
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAI 211
D RL ++L+ L I+ ++ +R P RI PELI+ + E G Y+ +
Sbjct: 203 DCY--GEYRLPELLRRLARIEGIEWVRL----LYAYPTRITPELIEVMATEPGVVPYLDL 256
Query: 212 HANHPYE 218
H E
Sbjct: 257 PLQHASE 263
>gi|87312365|ref|ZP_01094457.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
DSM 3645]
gi|87284930|gb|EAQ76872.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
DSM 3645]
Length = 333
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E V + + +L+ ++ E +A + + + TGG+PL+
Sbjct: 20 ISVTDRCNIRCFYCMPLENVQFKPRAELLTFEEIER-VARLAVSLGVRKFRLTGGEPLV- 77
Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
+L ++++ L I V+ L
Sbjct: 78 -RAQLHELIQRLAAIPGVEDL 97
>gi|228948475|ref|ZP_04110757.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228811234|gb|EEM57573.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 339
Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 24/166 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMND 176
>gi|330815962|ref|YP_004359667.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
BSR3]
gi|327368355|gb|AEA59711.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
BSR3]
Length = 370
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 47/197 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C RE+ +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPREVFDKDYPFLPHSALLSLEELERTARIFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
PL+ K L+ +++ L ++ V + LR +RV +
Sbjct: 100 PLL--RKNLEFLIERLARMETVDGRPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
++ L + + N S + + I +AG L V+ +G ND
Sbjct: 157 LDDTLFRRM-------------NDADFASADVLEGIFAAQDAGLAPLKVNMVVKRGTND- 202
Query: 251 PEILANLMRTFVELRIK 267
+ + R F +
Sbjct: 203 -AEIVPMARRFRNTGVV 218
>gi|301059397|ref|ZP_07200319.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300446478|gb|EFK10321.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 453
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 18/185 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L CP C +C + + + ++ + Y K I + F L+
Sbjct: 210 VCLMTSTGCPYSCHYCA-SHFLFPEF-VQRNPEEISEEILYWHNKWGIRDFSFYDDALLV 267
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHA 213
S K + +L+ + H +RFH+ I + I + L + G +
Sbjct: 268 SSDKHMAVLLERIA--DHNLNIRFHTPNAIHVKE-ITKSIALRLHQTGFQTIRLGLETSD 324
Query: 214 NHPY-EFS-----EEAIAAISRLANAGIILLSQ-SV-LLKGI-NDDPEILANLMRTFVEL 264
NH + A+ L NAG +Q V ++ G+ P+ +A +
Sbjct: 325 NHKRWHLDKKISQGDFAHAMDHLRNAGFH-PNQIGVYIMVGLPEQSPDAVAETIHHADRW 383
Query: 265 RIKPY 269
PY
Sbjct: 384 GGIPY 388
>gi|295090679|emb|CBK76786.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10]
Length = 290
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+GIV+R P ++++ C C FC M ++ V S + L +
Sbjct: 4 EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58
Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHSRVPIVDPQRINPEL 196
+ +V GD L+L ++L +L +R + + V++ + + I+ R + E
Sbjct: 59 GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGTAQDIL---RKSEEE 115
Query: 197 IQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
++ LKEAG + + E + E A +L GI
Sbjct: 116 LRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRCGIQ 164
>gi|226311621|ref|YP_002771515.1| hypothetical protein BBR47_20340 [Brevibacillus brevis NBRC 100599]
gi|226094569|dbj|BAH43011.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 452
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
R LK+ C +C FC G + S + + + Y++
Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKPESVVEQAQKLVEAGYLEIVLTGIHTGG 202
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D L L K+L L ++ ++ +R S ++ +I E+I+ + + + V
Sbjct: 203 YGED---LEDYNLAKLLIDLHQVEGLKRIRISS----IEASQITDEVIEVINNSDR-VVR 254
Query: 210 AIHANHPYEF-SEEAIAAISR 229
+H P + +E + + R
Sbjct: 255 HLHV--PLQAGDDEVLKRMRR 273
>gi|222150403|ref|YP_002559556.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
caseolyticus JCSC5402]
gi|222119525|dbj|BAH16860.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
caseolyticus JCSC5402]
Length = 336
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +LS ++ +A + + + +V TGG+
Sbjct: 17 ISVTDRCNFRCTYCMPKEIFGDDYVFLPKDELLSFEELTR-IAKVYAQLGVKKVRITGGE 75
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L +++ + I+ ++ +
Sbjct: 76 PLLRRD--LPDLIREIHAIEGIEDI 98
>gi|221211776|ref|ZP_03584754.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221167861|gb|EEE00330.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
Length = 367
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE+ GS + + A L I + ++ TGG+P
Sbjct: 39 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLGRIARAFVSLGVEKIRITGGEP 98
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR +RV + +
Sbjct: 99 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 155
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G NDD
Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201
Query: 252 EILANLMRTFVELRI 266
+ L+R F +
Sbjct: 202 -QILPLVRHFRHTGV 215
>gi|83590678|ref|YP_430687.1| hypothetical protein Moth_1844 [Moorella thermoacetica ATCC 39073]
gi|83573592|gb|ABC20144.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 360
Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 30/134 (22%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
++C CRFC + G +G +LS ++ A + +++ GG +
Sbjct: 60 TNICVNACRFCAFYRLPGDPEGYLLSREEIGRKIEATLAAGG--TQILMQGG---LHPDL 114
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L +IK + HS P+ E+ ++ G PV
Sbjct: 115 DLAWFEDLFSWIKSRYPVTLHSLSPV--------EIDDLARKEGLPVI------------ 154
Query: 221 EEAIAAISRLANAG 234
+ RL AG
Sbjct: 155 ----EVLRRLKKAG 164
>gi|206900889|ref|YP_002250798.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
H-6-12]
gi|229890516|sp|B5YE40|MIAB_DICT6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|206739992|gb|ACI19050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
H-6-12]
Length = 440
Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 15/108 (13%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157
C +C +C + G +K ++ + Y+ + + + G D L
Sbjct: 154 GCNNFCTYCIVPYLRGREKSR--DPEEIIREVEYLASQGVVEVTLLGQNVDSYGKD---L 208
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L +L + I ++ +RF + P+ ++ +LI+ + K
Sbjct: 209 GNVDLADLLVEIHRIPRIKRIRFLTSH----PRDVSDKLIRVVATHPK 252
>gi|75760857|ref|ZP_00740872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228967829|ref|ZP_04128843.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74491671|gb|EAO54872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228791879|gb|EEM39467.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 339
Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|317500218|ref|ZP_07958449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
8_1_57FAA]
gi|316898389|gb|EFV20429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
8_1_57FAA]
Length = 483
Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ I + D I ++ S +YP + + ++ C +C +C +
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216
Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174
S+D +A + I+ ++ + EV+ G + P+ ++L+ + I
Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ +RF + P+ ++ ELI+ + ++ K + +H
Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304
>gi|291087073|ref|ZP_06345323.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|291076389|gb|EFE13753.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
Length = 452
Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
R +K+ C +C +C R + V+ + AA Y I S
Sbjct: 151 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 210
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ T +P + L ++ L I ++ +R S ++P+ I E + L
Sbjct: 211 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 263
>gi|167644029|ref|YP_001681692.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
gi|167346459|gb|ABZ69194.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
Length = 348
Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 39/181 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
+ + C + C +C M K VLS ++ + + + ++ TGG+PL+
Sbjct: 35 VSVTDRCDLRCTYCMAEHMTFLPKAEVLSLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 93
Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQ 198
L+ L ++ L H L R + V + P+L +
Sbjct: 94 GIMTLVERLSRHLATGALDELTLTTNGTQLAQ--HASDLARLGVKRINVSLDTLKPDLFR 151
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
L G + +A I AGI + +V L+ D+ E L L+
Sbjct: 152 KLTRGGD--------------LSKVLAGIDAALAAGIQVKINAVALRH--DNAEELPALI 195
Query: 259 R 259
+
Sbjct: 196 Q 196
>gi|296331887|ref|ZP_06874352.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305673499|ref|YP_003865171.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296150965|gb|EFG91849.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411743|gb|ADM36862.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 373
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 16/119 (13%)
Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P E + + D GD + ++ +C + C C +
Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ L + L ++E ++ + TGG+P +LS K +++ + L H + +R
Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR 112
>gi|289427369|ref|ZP_06429082.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes J165]
gi|295129634|ref|YP_003580297.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK137]
gi|289159299|gb|EFD07490.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes J165]
gi|291375565|gb|ADD99419.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK137]
gi|332674504|gb|AEE71320.1| conserved radical SAM superfamily protein [Propionibacterium acnes
266]
Length = 364
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY ++L C + C +C+RR+ G + ++ + ++ Q V G
Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209
G+P L ++ V K + I R+ + + R++ ++I LK V +
Sbjct: 61 GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113
Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
++ P +E + + A + LA+A I + +VL
Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152
>gi|312793341|ref|YP_004026264.1| Radical SAM domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180481|gb|ADQ40651.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 341
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ + E L I + E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
+ +K+L+ + ++ +R +R P I+ E ++ LK K + + I
Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117
Query: 215 HPYEFSEEAIAAISR 229
++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130
>gi|237750753|ref|ZP_04581233.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373843|gb|EEO24234.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 412
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 10/126 (7%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
R +K+ C C +C + GS S + I E+S + EVI TG +
Sbjct: 115 RAFIKIQEGCNFACSYCIIPSVRGS--ARSFSEAHILDQIK-ILEQSGVTEVILTGTNIG 171
Query: 154 PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
L K + +++ + I + +R S ++P +I+ ++ L+ ++ I
Sbjct: 172 SYGLDTKTHIATLIQKIHDISGILRIRLGS----LEPSQIDSAFLEILELNKLERHLHIA 227
Query: 213 ANHPYE 218
H E
Sbjct: 228 LQHTSE 233
>gi|221317881|ref|ZP_03599175.1| YfkA [Bacillus subtilis subsp. subtilis str. JH642]
gi|221322154|ref|ZP_03603448.1| YfkA [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767189|ref|NP_388677.2| Fe-S oxidoreductase, radical SAM superfamily [Bacillus subtilis
subsp. subtilis str. 168]
gi|321314524|ref|YP_004206811.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis BSn5]
gi|261278024|sp|O34400|YFKA_BACSU RecName: Full=Putative protein yfkA
gi|225184816|emb|CAB12625.2| putative Fe-S oxidoreductase, radical SAM superfamily [Bacillus
subtilis subsp. subtilis str. 168]
gi|291483237|dbj|BAI84312.1| hypothetical protein BSNT_01329 [Bacillus subtilis subsp. natto
BEST195]
gi|320020798|gb|ADV95784.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus subtilis BSn5]
Length = 373
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%)
Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P E + + D GD + ++ +C + C C +
Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ L + L ++E ++ + TGG+P +LS K +++ + L H + +R
Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112
Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
+IN L ++ P +H +H
Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140
>gi|146282949|ref|YP_001173102.1| oxygen-independent coproporphyrinogen III oxidase, putative
[Pseudomonas stutzeri A1501]
gi|145571154|gb|ABP80260.1| oxygen-independent coproporphyrinogen III oxidase, putative
[Pseudomonas stutzeri A1501]
Length = 298
Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC EM + + + + E L I+ + + V G
Sbjct: 24 LILPVTNGCSWNACTFC---EMYTAPQKKFRARDEVE-VLEEIRRCGEQLIVQRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL K+L+ +R + VQ +
Sbjct: 80 DALVLPTRRLLKILEQIRQCLPEVQRV 106
>gi|50841594|ref|YP_054821.1| radical SAM superfamily protein [Propionibacterium acnes KPA171202]
gi|289424485|ref|ZP_06426268.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK187]
gi|50839196|gb|AAT81863.1| conserved radical SAM superfamily protein [Propionibacterium acnes
KPA171202]
gi|289155182|gb|EFD03864.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
acnes SK187]
Length = 364
Score = 43.6 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY ++L C + C +C+RR+ G + ++ + ++ Q V G
Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209
G+P L ++ V K + I R+ + + R++ ++I LK V +
Sbjct: 61 GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113
Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
++ P +E + + A + LA+A I + +VL
Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152
>gi|2626813|dbj|BAA23391.1| YfkA [Bacillus subtilis]
Length = 154
Score = 43.6 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%)
Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P E + + D GD + ++ +C + C C +
Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ L + L ++E ++ + TGG+P +LS K +++ + L H + +R
Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112
Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
+IN L ++ P +H +H
Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140
>gi|315925688|ref|ZP_07921897.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621006|gb|EFV00978.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 408
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 37/160 (23%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R P + + + C C CFR K LS K+ E + + V TG
Sbjct: 80 RIPIQADIVVTGKCHCNCWHCFR----IKDKREDLSLKEIERVMGELYALGTAT-VGITG 134
Query: 152 GDPLILSHKRLQKVLK--------TLRYIKHVQILRFH--------SRVPIVDPQRINPE 195
G+P++ ++ +LK L H F +RV + +
Sbjct: 135 GEPMLRED--IRDILKLIPEGMEGQLYTTGHQIDKNFAEFIQSTNVTRVIVSL-DHYLED 191
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
++ H H YE EA+ AI L ++G+
Sbjct: 192 AANAMR----------HYGHAYE---EAVKAIQCLVSSGV 218
>gi|229148819|ref|ZP_04277067.1| dehydrogenase [Bacillus cereus m1550]
gi|228634613|gb|EEK91194.1| dehydrogenase [Bacillus cereus m1550]
Length = 375
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|225028525|ref|ZP_03717717.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
gi|224954168|gb|EEG35377.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
Length = 450
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 28/131 (21%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + V+ AA Y E++
Sbjct: 150 HTRAYIKIQDGCNQFCSYCIIPYTRGRIRSKNPEEVIEEVKNLAAQGY-------KEIVL 202
Query: 150 TG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG D L L V+K ++ ++ V+ +R S ++P+ I E ++ L +
Sbjct: 203 TGIHLSSYGKD---LGTVTLLDVIKRIQQVEDVERIRLGS----LEPRIITEEFVKELVK 255
Query: 203 AGKPVYIAIHA 213
K + H
Sbjct: 256 CDK---VCPHF 263
>gi|152996920|ref|YP_001341755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
gi|229890562|sp|A6VZE1|MIAB_MARMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|150837844|gb|ABR71820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
Length = 451
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 13/122 (10%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT 150
+ ++ C YC FC R E V ++L + E + I V
Sbjct: 148 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFDSILKEVVQLAEQGVREI--HLLGQNVNAY 205
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD L ++ + I V+ +RF + P+ + LI+ + K +
Sbjct: 206 RGDTAEGDEADLADIIHAVAQIDGVERIRFTTSHPV----EFSDSLIEAFRNEPK-LVSH 260
Query: 211 IH 212
+H
Sbjct: 261 LH 262
>gi|307266180|ref|ZP_07547723.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306918784|gb|EFN49015.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 317
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + +L +++ + I + I +V FTGG+PL+
Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
K ++ ++ IK ++ + +++ E+ LKEAG K V I++ +
Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121
Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + ++ AI + + G+ + +V++K INDD
Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKSINDD 167
>gi|228906226|ref|ZP_04070113.1| dehydrogenase [Bacillus thuringiensis IBL 200]
gi|228853382|gb|EEM98152.1| dehydrogenase [Bacillus thuringiensis IBL 200]
Length = 375
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|30018672|ref|NP_830303.1| thioredoxin-like oxidoreductase [Bacillus cereus ATCC 14579]
gi|228956898|ref|ZP_04118679.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229108087|ref|ZP_04237712.1| dehydrogenase [Bacillus cereus Rock1-15]
gi|229125914|ref|ZP_04254939.1| dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|229143207|ref|ZP_04271639.1| dehydrogenase [Bacillus cereus BDRD-ST24]
gi|296501246|ref|YP_003662946.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171]
gi|29894213|gb|AAP07504.1| Thioredoxin-like oxidoreductases [Bacillus cereus ATCC 14579]
gi|228640288|gb|EEK96686.1| dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228657572|gb|EEL13385.1| dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|228675362|gb|EEL30581.1| dehydrogenase [Bacillus cereus Rock1-15]
gi|228802741|gb|EEM49577.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296322298|gb|ADH05226.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171]
Length = 375
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|322383639|ref|ZP_08057390.1| ribosomal protein S12 methylthiotransferase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321151851|gb|EFX44794.1| ribosomal protein S12 methylthiotransferase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 446
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + S + A ++ + E++ T
Sbjct: 139 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 195
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + L K+L L + ++ +R S ++ +I E+++ L + K
Sbjct: 196 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 247
Query: 207 VYIAIHA 213
+ +H
Sbjct: 248 MCRHLHI 254
>gi|42779617|ref|NP_976864.1| hypothetical protein BCE_0537 [Bacillus cereus ATCC 10987]
gi|206974237|ref|ZP_03235154.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217958018|ref|YP_002336562.1| hypothetical protein BCAH187_A0537 [Bacillus cereus AH187]
gi|222094217|ref|YP_002528274.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1]
gi|229137284|ref|ZP_04265900.1| dehydrogenase [Bacillus cereus BDRD-ST26]
gi|229194799|ref|ZP_04321586.1| dehydrogenase [Bacillus cereus m1293]
gi|42735533|gb|AAS39472.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|206747477|gb|EDZ58867.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217065915|gb|ACJ80165.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|221238272|gb|ACM10982.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1]
gi|228588647|gb|EEK46678.1| dehydrogenase [Bacillus cereus m1293]
gi|228646187|gb|EEL02405.1| dehydrogenase [Bacillus cereus BDRD-ST26]
gi|324324522|gb|ADY19782.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 375
Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|226950381|ref|YP_002805472.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
gi|226843573|gb|ACO86239.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
Length = 432
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|218899882|ref|YP_002448293.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
gi|218545891|gb|ACK98285.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
Length = 337
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 24/166 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMND 174
>gi|148380907|ref|YP_001255448.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 3502]
gi|153931336|ref|YP_001385215.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
gi|153937595|ref|YP_001388684.1| RNA modification protein [Clostridium botulinum A str. Hall]
gi|148290391|emb|CAL84518.1| putative radical SAM superfamily protein [Clostridium botulinum A
str. ATCC 3502]
gi|152927380|gb|ABS32880.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 19397]
gi|152933509|gb|ABS39008.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
Hall]
Length = 432
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|16080723|ref|NP_391551.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311629|ref|ZP_03593476.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315956|ref|ZP_03597761.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320868|ref|ZP_03602162.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221325153|ref|ZP_03606447.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. SMY]
gi|730103|sp|P39757|MOAA_BACSU RecName: Full=Molybdenum cofactor biosynthesis protein A;
Short=Protein narA
gi|516272|emb|CAA84540.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|1648856|emb|CAB03683.1| MoaA-like protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2636195|emb|CAB15687.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. subtilis str. 168]
Length = 341
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G K +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
PL+ + +++K L I ++ + S +P+ +R+ L +
Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138
Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
K+ G+ V ++ + + I AG+ + V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177
>gi|321313219|ref|YP_004205506.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
gi|320019493|gb|ADV94479.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
Length = 341
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G K +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
PL+ + +++K L I ++ + S +P+ +R+ L +
Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138
Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
K+ G+ V ++ + + I AG+ + V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177
>gi|254736837|ref|ZP_05194543.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
Western North America USA6153]
Length = 247
Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 26 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 84
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 85 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 136
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 137 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 183
>gi|291486249|dbj|BAI87324.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
subsp. natto BEST195]
Length = 341
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G K +LS ++ E + + ++ TGG+
Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
PL+ + +++K L I ++ + S +P+ +R+ L +
Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138
Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
K+ G+ V ++ + + I AG+ + V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177
>gi|254456428|ref|ZP_05069857.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083430|gb|EDZ60856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
sp. HTCC7211]
Length = 442
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 13/116 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIF-TGGDP 154
L + C +C FC V S+ E L Y+ + V+ +
Sbjct: 152 LTIQEGCDKFCHFC-----VVPYTRGPEYSRPLEQILDEAKYLADNGAQEIVLLGQNVNA 206
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+L ++ + I ++ +R+ + P+ ++ +LI+ K + K + +
Sbjct: 207 YSYEQNKLSNLIFEIEKIPQIKRIRYTTSH----PKDMSDDLIKVYKSSKKLMPLV 258
>gi|52144823|ref|YP_082004.1| moaA/nifB/pqqE family protein [Bacillus cereus E33L]
gi|300119045|ref|ZP_07056756.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1]
gi|51978292|gb|AAU19842.1| probable moaA/nifB/pqqE family protein [Bacillus cereus E33L]
gi|298723661|gb|EFI64392.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|330503695|ref|YP_004380564.1| putative radical SAM protein [Pseudomonas mendocina NK-01]
gi|328917981|gb|AEB58812.1| putative radical SAM protein [Pseudomonas mendocina NK-01]
Length = 496
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 83 HSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
H+PL + +Y R L + C CR+C G +S++ E
Sbjct: 77 HNPLPEMAAQYRSRKSFVFGGPALHLFVVTLRCNHSCRYCQVSRAPLGGAGHDMSAEHAE 136
Query: 133 AALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL 169
A+ + E + V F GG+PL L+ R+++V++ +
Sbjct: 137 YAVERLFESPSPVLTVEFQGGEPL-LAFNRIRQVVEAV 173
>gi|229028271|ref|ZP_04184407.1| dehydrogenase [Bacillus cereus AH1271]
gi|228733035|gb|EEL83881.1| dehydrogenase [Bacillus cereus AH1271]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|229048433|ref|ZP_04194000.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
gi|229130005|ref|ZP_04258969.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|229147295|ref|ZP_04275646.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228636196|gb|EEK92675.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-ST24]
gi|228653449|gb|EEL09323.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
BDRD-Cer4]
gi|228722948|gb|EEL74326.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
Length = 339
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ GS +L+ + E LA + + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229152925|ref|ZP_04281107.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
gi|228630538|gb|EEK87185.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
Length = 339
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|218233618|ref|YP_002369523.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
gi|218161575|gb|ACK61567.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
Length = 337
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175
>gi|218231727|ref|YP_002365264.1| hypothetical protein BCB4264_A0486 [Bacillus cereus B4264]
gi|218159684|gb|ACK59676.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|206967566|ref|ZP_03228522.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228919345|ref|ZP_04082714.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|229068169|ref|ZP_04201476.1| dehydrogenase [Bacillus cereus F65185]
gi|229177006|ref|ZP_04304401.1| dehydrogenase [Bacillus cereus 172560W]
gi|229188686|ref|ZP_04315725.1| dehydrogenase [Bacillus cereus ATCC 10876]
gi|206736486|gb|EDZ53633.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228594875|gb|EEK52655.1| dehydrogenase [Bacillus cereus ATCC 10876]
gi|228606481|gb|EEK63907.1| dehydrogenase [Bacillus cereus 172560W]
gi|228714983|gb|EEL66851.1| dehydrogenase [Bacillus cereus F65185]
gi|228840281|gb|EEM85553.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|160901857|ref|YP_001567438.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
gi|189028692|sp|A9BF51|MOAA_PETMO RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|160359501|gb|ABX31115.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
Length = 323
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C + V + + +L ++ + + + I +V TGG+PL+
Sbjct: 14 VSITDRCNLRCIYCMPPQGVTFKTHSSILRYEEIIKIVE-VGTELGIKKVRITGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
+ + ++K LR I ++ + + ++ LK AG V I++ + +P
Sbjct: 72 -RQGVVNLIKELRKIPELEDITMTTNGVLLPKYAF------ALKRAGLSRVNISLDSLNP 124
Query: 217 ---YEFS--EEAIAAISRLANA---GI-ILLSQSVLLKGINDDP-------EILANLMRT 260
+ E AI + A G+ + +V++KGIND+ I +L
Sbjct: 125 DTYKTITRRGEFSQAIEGIKAALEVGLNPVKINTVVMKGINDNELENFVNLTIDKDLHVR 184
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
F+E Y+ + + + ++ +++ E ++I+ +
Sbjct: 185 FIE------YMPMGETSLLSGNYYVSLNEFKEIIIDKMGMVP 220
>gi|30022797|ref|NP_834428.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|296505191|ref|YP_003666891.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
gi|29898356|gb|AAP11629.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
14579]
gi|296326243|gb|ADH09171.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
BMB171]
Length = 337
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ GS +L+ + E LA + + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175
>gi|228950973|ref|ZP_04113094.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229077776|ref|ZP_04210403.1| dehydrogenase [Bacillus cereus Rock4-2]
gi|228705504|gb|EEL57863.1| dehydrogenase [Bacillus cereus Rock4-2]
gi|228808700|gb|EEM55198.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|218895539|ref|YP_002443950.1| hypothetical protein BCG9842_B4837 [Bacillus cereus G9842]
gi|218541756|gb|ACK94150.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|196034724|ref|ZP_03102132.1| conserved hypothetical protein [Bacillus cereus W]
gi|228944235|ref|ZP_04106611.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|195992767|gb|EDX56727.1| conserved hypothetical protein [Bacillus cereus W]
gi|228815386|gb|EEM61631.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|167462198|ref|ZP_02327287.1| RNA modification enzyme, MiaB family protein [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 449
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + S + A ++ + E++ T
Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + L K+L L + ++ +R S ++ +I E+++ L + K
Sbjct: 199 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 250
Query: 207 VYIAIHA 213
+ +H
Sbjct: 251 MCRHLHI 257
>gi|118476173|ref|YP_893324.1| radical SAM superfamily oxidoreductase [Bacillus thuringiensis str.
Al Hakam]
gi|225862462|ref|YP_002747840.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102]
gi|118415398|gb|ABK83817.1| oxidoreductase, radical SAM superfamily [Bacillus thuringiensis
str. Al Hakam]
gi|225788857|gb|ACO29074.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|75760084|ref|ZP_00740147.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228977177|ref|ZP_04137576.1| dehydrogenase [Bacillus thuringiensis Bt407]
gi|74492434|gb|EAO55587.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228782486|gb|EEM30665.1| dehydrogenase [Bacillus thuringiensis Bt407]
gi|326938204|gb|AEA14100.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|47567247|ref|ZP_00237961.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241]
gi|228983679|ref|ZP_04143879.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|229042322|ref|ZP_04190072.1| dehydrogenase [Bacillus cereus AH676]
gi|47556090|gb|EAL14427.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241]
gi|228726981|gb|EEL78188.1| dehydrogenase [Bacillus cereus AH676]
gi|228776031|gb|EEM24397.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 375
Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|303233275|ref|ZP_07319947.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
PB189-T1-4]
gi|302480665|gb|EFL43753.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
PB189-T1-4]
Length = 532
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 32/173 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C C FC + G +D A + + + I E+I G D I
Sbjct: 220 AFVKISEGCSRMCAFCAIPHIRGPY--ASRPPQDILAEVDML-VDAGIHEIILIGQDTGI 276
Query: 157 L-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
K L +L+ + + HV+ + RV + P+ + PELI +++ + + YI
Sbjct: 277 WGCDFKEPKTLAWLLQQVAH--HVRGKQCWIRVLYLQPEGMTPELISTIRDTPEVLPYID 334
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
I H E + R+ G + L L T
Sbjct: 335 IPIQHCSE------QVLKRMGRTG---------------SAQELHELFATLRR 366
>gi|312200419|ref|YP_004020480.1| radical SAM domain protein [Frankia sp. EuI1c]
gi|311231755|gb|ADP84610.1| Radical SAM domain protein [Frankia sp. EuI1c]
Length = 428
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 33/161 (20%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQEKSQIW----- 145
+LK+ C + C +C+ V S + +S + E A+ I E ++
Sbjct: 55 ILKIHSRCNLACDYCY----VYSAADSGWRRQPPRMSRRTAEQAIRRIAEHTRTHGLSQV 110
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
E++ GG+PL+ + + LR I +R ++ V + L+ L E
Sbjct: 111 EIVLHGGEPLLAGADFVGWLADELRRQIPPPVRVRIVTQTNGVA---LRAGLLDLLVERD 167
Query: 205 KPVYIA------IHANHPYEFS------EEAIAAISRLANA 233
V ++ H H F+ A+ L +A
Sbjct: 168 IAVCVSLDGPSGAHDRH-RRFADGRRSYPRVREALELLTSA 207
>gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521]
gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 453
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 65 EELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+E+ L E ED + HS + Y I L ++H C + C++CF E
Sbjct: 63 DEIQELAEDGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKH--V 175
G V+S + + A+ Y+ ++S E+ GG+P L ++++++K R +
Sbjct: 121 GHGGVMSVETAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDKIKEIIKYARDNEEKWG 179
Query: 176 QILRF 180
+ +RF
Sbjct: 180 KRIRF 184
>gi|160940239|ref|ZP_02087584.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC
BAA-613]
gi|158436819|gb|EDP14586.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC
BAA-613]
Length = 472
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 41/188 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 85 LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 131
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ + + + +I+R + Q NP+L + L
Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPQLRCKMLN--------------- 167
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
F+ + + + L + + + Q V K +ND E+ + R P+ +
Sbjct: 168 NRFAGDKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTIRDL---SRYLPFLRSVSVV 224
Query: 277 AAGTSHFR 284
AG + FR
Sbjct: 225 PAGITKFR 232
>gi|324328622|gb|ADY23882.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 337
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E LA + + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|85859326|ref|YP_461528.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
gi|85722417|gb|ABC77360.1| radical SAM superfamily [Syntrophus aciditrophicus SB]
Length = 408
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 69/200 (34%), Gaps = 45/200 (22%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + ++ C + C C L++ + + + I ++FTGG
Sbjct: 60 YPGHPVWEVTRACNLSCIHC--HAKSSQAASDELTTAEGKRLIDQIASMPAFRTLVFTGG 117
Query: 153 DPLILSHKRLQKVLKT-----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+PL+ + ++L+ L I + I+ + + LK+ G V
Sbjct: 118 EPLVRKD--IFELLRHSQKAGLANI------------LATNGTLIDDAMARKLKDHGV-V 162
Query: 208 YIAIHANHPYE-----------FSEEAIAAISRLANAGIIL--------LSQSV---LLK 245
AI + P E E A+ I AGI+L + V L+
Sbjct: 163 CNAISVDAPDETIHNYVRNSPRAFELALRGIEATKKAGILLQINTTAMEYNLPVLSELID 222
Query: 246 GINDDPEILANLMRTFVELR 265
IND + LM V +
Sbjct: 223 FINDQGASVM-LMYQLVAVG 241
>gi|30260587|ref|NP_842964.1| hypothetical protein BA_0421 [Bacillus anthracis str. Ames]
gi|47525697|ref|YP_017046.1| hypothetical protein GBAA_0421 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183436|ref|YP_026688.1| hypothetical protein BAS0408 [Bacillus anthracis str. Sterne]
gi|65317850|ref|ZP_00390809.1| COG0535: Predicted Fe-S oxidoreductases [Bacillus anthracis str.
A2012]
gi|170707171|ref|ZP_02897627.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|229603544|ref|YP_002865034.1| hypothetical protein BAA_0486 [Bacillus anthracis str. A0248]
gi|254762009|ref|ZP_05213858.1| hypothetical protein BantA9_26321 [Bacillus anthracis str.
Australia 94]
gi|30253955|gb|AAP24450.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47500845|gb|AAT29521.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177363|gb|AAT52739.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|170127949|gb|EDS96820.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|229267952|gb|ACQ49589.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 375
Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + + P +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGV----------PTQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|257470893|ref|ZP_05634983.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
gi|317065094|ref|ZP_07929579.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
gi|313690770|gb|EFS27605.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
ATCC 49185]
Length = 324
Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C++C R M + +L+ ++ + + I K I ++ TGG+PL+
Sbjct: 14 LSITDRCNLRCQYCMSERNMNFLPREELLTFEEIKRVVK-IFSKIGIKKIRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
+ +L+ + ++ ++ + + + + LK K + I++ +P
Sbjct: 72 -RRNFSDILENISSVEGIKEINLTTNGLL-----LGENFESLLKNKVKKINISLDTLNPV 125
Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + ++ + I + GI + VL+KG ND+
Sbjct: 126 LYNEITRGGSLDKVLKNIFKAIELGIERVKINIVLIKGKNDN 167
>gi|40062747|gb|AAR37641.1| molybdenum cofactor biosynthesis protein A [uncultured marine
bacterium 439]
Length = 331
Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C +C + + VLS ++ + E + +V TGG+PL+
Sbjct: 17 VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVGLFAE-LGVTKVRLTGGEPLLR 75
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
+ + + L I + + P+ + P L LK G I+I + P
Sbjct: 76 KD--ILDLTRMLGDIPGLTDI------PLSTNAHLLPSLAGKLKSHGINRANISIDSLIP 127
Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249
E + + I I AG+ + V++KG+ND
Sbjct: 128 ERFKEITRDGDLARVIKGIDAAIAAGMSPIKLNMVVMKGVND 169
>gi|49480103|ref|YP_034749.1| moaA/nifB/pqqE family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|218901625|ref|YP_002449459.1| hypothetical protein BCAH820_0467 [Bacillus cereus AH820]
gi|228925675|ref|ZP_04088762.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|229120083|ref|ZP_04249335.1| dehydrogenase [Bacillus cereus 95/8201]
gi|49331659|gb|AAT62305.1| probable moaA/nifB/pqqE family protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|218536468|gb|ACK88866.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|228663321|gb|EEL18909.1| dehydrogenase [Bacillus cereus 95/8201]
gi|228833950|gb|EEM79500.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 375
Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|295092195|emb|CBK78302.1| MiaB-like tRNA modifying enzyme [Clostridium cf. saccharolyticum
K10]
Length = 443
Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
R +K+ C +C +C R + V+ + AA Y I S
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 201
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ T +P + L ++ L I ++ +R S ++P+ I E + L
Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254
>gi|23097891|ref|NP_691357.1| hypothetical protein OB0436 [Oceanobacillus iheyensis HTE831]
gi|22776115|dbj|BAC12392.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 376
Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++C + C C + L + E L I + + TGG+P +++
Sbjct: 36 FTTTYMCNMRCAHCAVGYTLQQMDPDALPMELIEKRLDEI---PHLRTLSITGGEP-MMN 91
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
K +++ + L H + ++ + P E++ L +H +H
Sbjct: 92 KKSVRQYVLPLLKYAHERGIKTQMNSNLTLPYNRYEEIVPYLD--------VLHISH 140
>gi|320161385|ref|YP_004174609.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
UNI-1]
gi|319995238|dbj|BAJ64009.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
UNI-1]
Length = 328
Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 99 LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C + + + ++ ++ + + + I ++ TGG+PL
Sbjct: 15 ISVTDRCNLRCVYCMPPQGIPLTSHDAIMRYEEIVEVVR-VAAEQGITDIRLTGGEPL-- 71
Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
RL +++ + + ++ + + ++ +R E LKEAG K V I++
Sbjct: 72 --ARLGITELVHMIAAVPGIRDISMTTNGLLL--ERFAGE----LKEAGLKRVNISLDTL 123
Query: 215 HPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
+P F+ I +AG+ + +V+++G+NDD
Sbjct: 124 NPERFARITRGGSFEQVWRGILAAESAGLYPIKLNTVVMRGVNDD 168
>gi|298385134|ref|ZP_06994693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_14]
gi|298262278|gb|EFI05143.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_14]
Length = 164
Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72
Query: 142 SQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93
>gi|161522430|ref|YP_001585359.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|160345983|gb|ABX19067.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 408
Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE+ GS + + A L I + ++ TGG+P
Sbjct: 80 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 139
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR +RV + +
Sbjct: 140 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 196
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G NDD
Sbjct: 197 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 242
Query: 252 EILANLMRTFVELRI 266
+ L+R F +
Sbjct: 243 -QILPLVRHFRHTGV 256
>gi|303229106|ref|ZP_07315908.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516230|gb|EFL58170.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 435
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150
R +K+ C YC FC + L S+ + + + E E++ T
Sbjct: 147 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 200
Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G G+ + R L V+K L I ++ +RF S ++ ++ ELI+ L K
Sbjct: 201 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 255
Query: 206 PVYIAIH 212
V +H
Sbjct: 256 RVCPHLH 262
>gi|229182806|ref|ZP_04310045.1| dehydrogenase [Bacillus cereus BGSC 6E1]
gi|228600686|gb|EEK58267.1| dehydrogenase [Bacillus cereus BGSC 6E1]
Length = 375
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|196040113|ref|ZP_03107415.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196045287|ref|ZP_03112519.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108]
gi|228913169|ref|ZP_04076808.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|301052137|ref|YP_003790348.1| putative moaA/nifB/pqqE family protein [Bacillus anthracis CI]
gi|196023871|gb|EDX62546.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108]
gi|196028968|gb|EDX67573.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|228846574|gb|EEM91587.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300374306|gb|ADK03210.1| probable moaA/nifB/pqqE family protein [Bacillus cereus biovar
anthracis str. CI]
Length = 375
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|165870651|ref|ZP_02215304.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167634839|ref|ZP_02393158.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641253|ref|ZP_02399506.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170688985|ref|ZP_02880186.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|177654528|ref|ZP_02936384.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190567633|ref|ZP_03020546.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227813094|ref|YP_002813103.1| hypothetical protein BAMEG_0492 [Bacillus anthracis str. CDC 684]
gi|254686810|ref|ZP_05150668.1| hypothetical protein BantC_23620 [Bacillus anthracis str.
CNEVA-9066]
gi|254724884|ref|ZP_05186667.1| hypothetical protein BantA1_20854 [Bacillus anthracis str. A1055]
gi|254738964|ref|ZP_05196666.1| hypothetical protein BantWNA_27720 [Bacillus anthracis str. Western
North America USA6153]
gi|254744552|ref|ZP_05202231.1| hypothetical protein BantKB_26716 [Bacillus anthracis str. Kruger
B]
gi|254756190|ref|ZP_05208219.1| hypothetical protein BantV_27321 [Bacillus anthracis str. Vollum]
gi|164713485|gb|EDR19009.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510761|gb|EDR86154.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167529913|gb|EDR92661.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170667086|gb|EDT17848.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172080640|gb|EDT65723.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190561420|gb|EDV15392.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227003854|gb|ACP13597.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
Length = 375
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|161525364|ref|YP_001580376.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189349899|ref|YP_001945527.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|160342793|gb|ABX15879.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
gi|189333921|dbj|BAG42991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans ATCC 17616]
Length = 370
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%)
Query: 58 RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
R+ IP + +++ +P + + D PL+ + + + C C +C
Sbjct: 3 RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54
Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
RE+ G +L+ ++ E + ++ TGG+PL+ K L+ +++
Sbjct: 55 MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111
Query: 168 TLRYI 172
L +
Sbjct: 112 RLARL 116
>gi|94502018|ref|ZP_01308524.1| radical SAM domain protein [Oceanobacter sp. RED65]
gi|94425825|gb|EAT10827.1| radical SAM domain protein [Oceanobacter sp. RED65]
Length = 294
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGG 152
++L++ + C C FC EM ++ + K+ E I I +V G
Sbjct: 18 LILQVTNGCSWNNCTFC---EMYTQEQKKFKARKEEEVEQDIINASKMIQPFEKVFLADG 74
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D ++L +RL+ +L++++ + V+ +
Sbjct: 75 DAMVLPMRRLKAILQSIKQHMPWVKRV 101
>gi|229089543|ref|ZP_04220810.1| dehydrogenase [Bacillus cereus Rock3-42]
gi|228693759|gb|EEL47455.1| dehydrogenase [Bacillus cereus Rock3-42]
Length = 375
Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K + + L H + +R +IN L L + P +H +
Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|303241628|ref|ZP_07328127.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
CD2]
gi|302590848|gb|EFL60597.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
CD2]
Length = 438
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 24/133 (18%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
V++ R +K+ C +C +C + + S+ E L ++ + E+
Sbjct: 138 VYKERTRAFIKIQEGCSQFCSYC-----IIPYARGPIRSRPVEYVLDEVRKLALNGYKEI 192
Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ TG D + L ++K + I V+ +R S ++P I E + +
Sbjct: 193 VLTGIHIASYGKD---IKTTSLIDIIKKVHEIDGVERVRLGS----IEPTTITHEFVNEI 245
Query: 201 KEAGKPVYIAIHA 213
+ K + H
Sbjct: 246 GKLEK---VCPHF 255
>gi|282850176|ref|ZP_06259555.1| MiaB-like protein [Veillonella parvula ATCC 17745]
gi|294791828|ref|ZP_06756976.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
gi|294793689|ref|ZP_06758826.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
gi|282579669|gb|EFB85073.1| MiaB-like protein [Veillonella parvula ATCC 17745]
gi|294455259|gb|EFG23631.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
gi|294457058|gb|EFG25420.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
Length = 431
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC FC + L S+ + + + E++ TG
Sbjct: 145 RAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTGIH 199
Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G+ + R L V+K L I ++ +RF S ++ ++ EL++ L K V
Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKRVC 254
Query: 209 IAIH 212
+H
Sbjct: 255 PHLH 258
>gi|226311475|ref|YP_002771369.1| coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599]
gi|226094423|dbj|BAH42865.1| putative coproporphyrinogen III oxidase [Brevibacillus brevis NBRC
100599]
Length = 507
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDT 131
I D + + + + + + CP C +C R +
Sbjct: 154 IVDKQLNVVPDLYQIDRELSVYIGIPFCPTKCAYCTFPAYAIRSHTASVNPFLEGLHYEM 213
Query: 132 EAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
E +++ Q I + F GG P ++ + ++ +T+ R H+ +R + V P
Sbjct: 214 ERMGEWLRANDQRITSIYFGGGTPTSITADDMNQLFETMHRSFPHMGDVRELT-VEAGRP 272
Query: 190 QRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
I E + +K + I P F++E + AI R
Sbjct: 273 DTITREKLDVMKRWEVDRISIN-----PQSFTQETLQAIGR 308
>gi|221201327|ref|ZP_03574366.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
gi|221208807|ref|ZP_03581805.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221214113|ref|ZP_03587086.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221166290|gb|EED98763.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD1]
gi|221171263|gb|EEE03712.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221178595|gb|EEE11003.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
Length = 370
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%)
Query: 58 RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
R+ IP + +++ +P + + D PL+ + + + C C +C
Sbjct: 3 RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54
Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
RE+ G +L+ ++ E + ++ TGG+PL+ K L+ +++
Sbjct: 55 MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111
Query: 168 TLRYI 172
L +
Sbjct: 112 RLARL 116
>gi|49187615|ref|YP_030868.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
anthracis str. Sterne]
gi|49181542|gb|AAT56918.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
anthracis str. Sterne]
Length = 252
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 31 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 89
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 90 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 141
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 142 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 188
>gi|108757868|ref|YP_632408.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
DK 1622]
gi|108461748|gb|ABF86933.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
DK 1622]
Length = 334
Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 45/223 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C K +L ++ E + I V TGG+PLI
Sbjct: 30 LSITDRCNFRCSYC--SPASWGGKRDLLGPEELERITSVFARM-GIRRVRLTGGEPLIRP 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + + + + +Q L + L + L+EAG N
Sbjct: 87 D--ILDIARRIAAVPGIQHLAI-TSNASHL-----ERLARPLREAG-----VTQLN--LS 131
Query: 219 FSEEAIAAISRLANAG---IILLS--------------QSVLLKGINDDPEILANLMRTF 261
R++ G +L V+++G+ND E + L+
Sbjct: 132 LDTLLAETFRRISKQGDFDAVLRGVDAAAGAGYASLKLNVVVMRGVND--EEASALIAYA 189
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
P + G + ++V L+ SGL
Sbjct: 190 HARGFTP--RFIELMPFGQG---TPVPTA-ELVERLQA--SGL 224
>gi|332669698|ref|YP_004452706.1| Radical SAM domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338736|gb|AEE45319.1| Radical SAM domain protein [Cellulomonas fimi ATCC 484]
Length = 398
Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 40/202 (19%)
Query: 85 PLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
P++ + H DR ++ ++ C + CR C R + + + L + D + + +
Sbjct: 19 PVRVLHHDVSDRPFLVIWEVTRACALACRHC-RADAIPRRDPRELDTDDGKRLMDDLASF 77
Query: 142 SQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRIN 193
++ TGGDP L +++ + + P V P R+
Sbjct: 78 GAPRPLLVLTGGDPFERPD--LTELVA------------YGTSIGLSVALAPSVTP-RLT 122
Query: 194 PELIQCLKEAGKPVYIA--------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+++ L++AG H + + A+ + +AGI L + +
Sbjct: 123 RDVLLELRDAGAKAVSVSLDGAQAETHDAFRGVPGVYDATLTAMEAVRSAGIRLQVNTTV 182
Query: 244 LKGINDDPEILANLMRTFVELR 265
G L ++R ++
Sbjct: 183 TAG---TVHELPWVLRRVLDAG 201
>gi|288959088|ref|YP_003449429.1| nitrogen fixation protein [Azospirillum sp. B510]
gi|288911396|dbj|BAI72885.1| nitrogen fixation protein [Azospirillum sp. B510]
Length = 521
Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 87/256 (33%), Gaps = 67/256 (26%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + + LA QE Q
Sbjct: 65 AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSEKLTPDQALKKILAVAQEIPQ 124
Query: 144 IWEVIFTG-GDPL-----------------------ILSHKRLQ--KVLKTLRY--IKHV 175
+ + G GD L LS L + T+ I HV
Sbjct: 125 LSVIGIAGPGDSLAAAGKNTFATFEMLQKKAPDLKLCLSTNGLALPDHVDTIAQYNIDHV 184
Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+ + +VDP+ RI P + K G +H E+ + + L
Sbjct: 185 -TITIN----MVDPEVGARIYPWIFYKHKRWTGLDAAKILH--------EQQMLGLEMLT 231
Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHF--- 283
+ GI++ SV++ G+ND E L + + I P D A GT +F
Sbjct: 232 SRGILVKVNSVMIPGVND--EHLLEVNKAVKSCGAFLHNIMPL---ISDPAHGT-YFGLN 285
Query: 284 --RLTIEEGQKIVASL 297
R + K+V
Sbjct: 286 GQRGPTAQELKLVQDA 301
>gi|256389735|ref|YP_003111299.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
44928]
gi|256355961|gb|ACU69458.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
Length = 815
Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 36/161 (22%)
Query: 98 LLKLLHVCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-----IF 149
+LK+ C + C C+ E + V+S + E I + ++ V I
Sbjct: 13 ILKVHSRCDLACNHCYMYEGADQSWQARPKVMSLETAERIGGRIADHARRHGVDSVRLIL 72
Query: 150 TGGDPLILSHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+PL+ ++L+ ++ LR + + +R H+ R++ + + V
Sbjct: 73 HGGEPLLAGTEQLEGIILRLRKVLDGITADIRVHTNAV-----RLDARFLDLFVKHDVRV 127
Query: 208 YIAI---------H-------ANHPYEFSEEAIAAISRLAN 232
+++ H +HP AA++ L
Sbjct: 128 GVSLDGDRLANDRHRLYSDGRTSHPQ-----VRAALALLRR 163
>gi|187778883|ref|ZP_02995356.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC
15579]
gi|187772508|gb|EDU36310.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC
15579]
Length = 454
Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + +++++ I + + H+ +P+ R+ EL+
Sbjct: 139 MKDEDIERIIN--YKISPIN-ISVHT----TNPELRV--ELLN----------------- 172
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 173 -NRFAGNIYERMKKLAEGGIKMNCQVVLCPGLN-NAEELKRTIEDLYAL 219
>gi|325289531|ref|YP_004265712.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324964932|gb|ADY55711.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 332
Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R V ++ LS+ + E L I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDSGVRQEEE--LSTAEAETMLEQIAR-AGFKIMIFSGGEPLM 59
Query: 157 LSH-KRLQKVLKTL 169
L + L
Sbjct: 60 RPDIVDLAAYAREL 73
>gi|312877235|ref|ZP_07737203.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311795949|gb|EFR12310.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 218
Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ + E L I + E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
+ +K+L+ + ++ +R +R P I+ E ++ LK K + + I
Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117
Query: 215 HPYEFSEEAIAAISR 229
++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130
>gi|210623865|ref|ZP_03294100.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
gi|210153291|gb|EEA84297.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
Length = 432
Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 20/128 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+D + + ++ EV+ TG
Sbjct: 141 RTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDLDNIVEEVKLLASKGYKEVVLTG 195
Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ K +L V+K + I ++ +R S V+P E ++ + + K
Sbjct: 196 IHVASYGKDIKDKEVKLLDVIKAVNEIDGIERIRTSS----VEPILFTDEFVEEISKMNK 251
Query: 206 PVYIAIHA 213
+ H
Sbjct: 252 ---VCPHF 256
>gi|169830805|ref|YP_001716787.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
audaxviator MP104C]
gi|169637649|gb|ACA59155.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
audaxviator MP104C]
Length = 327
Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 41/222 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
+ L C + C +C G QK + E+ + I+ + I ++ TGG+PL+
Sbjct: 17 VSLTERCNLNCFYC----RPGEQKTPTVDGLPLESLMRVIRAGARVGIRKIRLTGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
V+ L I + + + ++ P+ Q L+ AG K V I++
Sbjct: 73 RPDVI--PVVAALNEIPQIDDIALTTNGSLLAPR------AQGLRAAGLKRVNISLDTLR 124
Query: 216 PYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDDP-EILANLMRTFVELR 265
P F + E A ++ L A + V+++GINDD + L
Sbjct: 125 PDRFRSITRNGELSAVMNGLEAALAQDLHPVKLNMVVMRGINDDEIDDFVRLTED----- 179
Query: 266 IKPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKE 299
+P LH +SH+ + +E ++ +
Sbjct: 180 -RP--LHIRFIELMPIGVSSHWASEYYVPADEIRRNIDQRYG 218
>gi|118580731|ref|YP_901981.1| MiaB-like tRNA modifying protein [Pelobacter propionicus DSM 2379]
gi|118503441|gb|ABK99923.1| MiaB-like tRNA modifying enzyme [Pelobacter propionicus DSM 2379]
Length = 427
Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 17/151 (11%)
Query: 72 EEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ ED + D + ++H R L++ + C +C +C G + +S
Sbjct: 110 DASEDMVKDAGQATGGALLHLTSFAEHTRAFLQVQNGCDSFCSYCIVPYARG--RSRSVS 167
Query: 128 SKDTEAALAYIQEKSQIWEVIFT----GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHS 182
+ + + S EV+ T G L LS + L +++ + ++ LR S
Sbjct: 168 PAEVLEGVRRL-VDSGFREVVLTGIHLGAYGLDLSPGESLACLVERILEETSLERLRIGS 226
Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++P + LI + + V H
Sbjct: 227 ----LEPNEFDDRLISLFSRSPR-VCHHFHI 252
>gi|310823369|ref|YP_003955727.1| hypothetical protein STAUR_6143 [Stigmatella aurantiaca DW4/3-1]
gi|309396441|gb|ADO73900.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 480
Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%)
Query: 86 LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
L + +Y R + + C C++C V + ++ + + AL
Sbjct: 79 LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 138
Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
+ + ++ F GG+PL L+ ++ V++ + + L+F V + R+
Sbjct: 139 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 194
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240
+ E++ K+ G ++++ + P + I R A L Q
Sbjct: 195 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 249
Query: 241 SV 242
+V
Sbjct: 250 AV 251
>gi|299783310|gb|ADJ41308.1| Molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum CECT 5716]
Length = 332
Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + I +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGIHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98
>gi|313680339|ref|YP_004058078.1| radical sam domain protein [Oceanithermus profundus DSM 14977]
gi|313153054|gb|ADR36905.1| Radical SAM domain protein [Oceanithermus profundus DSM 14977]
Length = 357
Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148
RYP + ++ H C + C+ C ++ + TE A +++E + ++
Sbjct: 7 RYPFLVAWEMTHACDLACKHC----RASAEPDPLPGEITTEEAFRFLEEMATYKPKPILL 62
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TGGDPL L ++L+ R + ++ P V P + E+I KE
Sbjct: 63 PTGGDPL--KRHDLWEILEKARELG----IKIGI-TPAVTP-LLTHEVIDRFKELDVH 112
>gi|302330623|gb|ADL20817.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium
pseudotuberculosis 1002]
Length = 412
Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147
I H+ P + ++ C + C+ C G + + + A L + + V
Sbjct: 34 INHK-PFIAIWEVTRACGLVCKHCRANAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200
+ TGGDP + L+++++ + ++ P V P R+ E I L
Sbjct: 92 VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136
Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ GK + +++ F A + +AG L S L K +
Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ L++T +E+ K +Y+ F + G + A
Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228
>gi|65319439|ref|ZP_00392398.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
anthracis str. A2012]
Length = 337
Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ + + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGXKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128
Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175
>gi|303232181|ref|ZP_07318884.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513287|gb|EFL55326.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
Length = 431
Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150
R +K+ C YC FC + L S+ + + + E E++ T
Sbjct: 143 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 196
Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G G+ + R L V+K L I ++ +RF S ++ ++ ELI+ L K
Sbjct: 197 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 251
Query: 206 PVYIAIH 212
V +H
Sbjct: 252 RVCPHLH 258
>gi|295402412|ref|ZP_06812366.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermoglucosidasius C56-YS93]
gi|294975575|gb|EFG51199.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermoglucosidasius C56-YS93]
Length = 340
Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G + +L+ ++ E + ++ TGG+
Sbjct: 21 ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196
PL+ L ++ L I ++ + R + V ++ ++
Sbjct: 80 PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G V + + I AG+ + V+ KG+ND
Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178
>gi|312112039|ref|YP_003990355.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y4.1MC1]
gi|311217140|gb|ADP75744.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
Y4.1MC1]
Length = 340
Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C E+ G + +L+ ++ E + ++ TGG+
Sbjct: 21 ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196
PL+ L ++ L I ++ + R + V ++ ++
Sbjct: 80 PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G V + + I AG+ + V+ KG+ND
Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178
>gi|302385233|ref|YP_003821055.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
gi|302195861|gb|ADL03432.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
Length = 347
Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+L C + C+ C+ + + ++S++ + Y+ E I+E I +GG+PL+
Sbjct: 45 FELTSHCNLACKHCYNNSGINNISDA-MTSQNWISFSQYLVEHGGIFECIISGGEPLLFG 103
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKP 206
+ L + I H + I + + E+ L++
Sbjct: 104 ND-----LFKIMDILHED----GTLFFLITNGYLLTKEIADQLRKYRYH 143
>gi|296132310|ref|YP_003639557.1| Radical SAM domain protein [Thermincola sp. JR]
gi|296030888|gb|ADG81656.1| Radical SAM domain protein [Thermincola potens JR]
Length = 443
Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 41/164 (25%)
Query: 80 DNNHSPLKGIVH-------------------RYPDRIL-------LKLLHVCPVYCRFCF 113
+ +++ +KGIV+ +YP + +++ CP C FC
Sbjct: 149 EEDYTSVKGIVYMEKRGGIRFTGRRRPVNLNKYPPFAIKHRLFSPIEITRGCPYLCSFCQ 208
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPL--------ILSHKRLQ 163
+ G Q + E L Y++ ++ + ++ F + ++ +L+
Sbjct: 209 TGHIFGPQ----PRHRSIENILGYVRLLTERGLTDIKFITPNAFSYGSPDGKTINVNKLE 264
Query: 164 KVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+L+ +R I + + S V P+ + E + +++
Sbjct: 265 ALLRGVRAIIGNRGRIFMGSFPSEVRPEHVTEETVNLVRKYANN 308
>gi|291539696|emb|CBL12807.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis XB6B4]
Length = 435
Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + +G V S K E L I KS EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEINELAKSGYKEVVLTG 197
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + + L +++ + I+ ++ +R S ++P+ + + + L E K
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250
Query: 209 IAIHA 213
I H
Sbjct: 251 ICPHF 255
>gi|229161145|ref|ZP_04289132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
gi|228622241|gb|EEK79080.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
R309803]
Length = 337
Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGTDYAFLQEECLLTFDEIERLARLFISM-GVEKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKLLKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175
>gi|57168872|ref|ZP_00368002.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
gi|305431977|ref|ZP_07401144.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
gi|57019708|gb|EAL56394.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
gi|304445061|gb|EFM37707.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
Length = 418
Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y EV+
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEQALLRQVEILGANGY-------SEVVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDERWME 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|219669369|ref|YP_002459804.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219539629|gb|ACL21368.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 332
Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G Q L++ + + L I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAR-AGFKIMIFSGGEPLL 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210
+ +++ + LR F + + I E+ + LKEAG + + +
Sbjct: 60 RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108
Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236
+H + +F EEA+ + G+
Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140
>gi|160915923|ref|ZP_02078131.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
gi|158432399|gb|EDP10688.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
Length = 249
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 18/190 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + L+ C + C++C + Q+ + S + + AL Y Q + +GG+
Sbjct: 19 PGVRFVIFLNGCQMRCKYCHNVDTWQMQEANMTSDELLKKALRYRSYWKQGGGITVSGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ L+ + + + K V + + P Q +L + L + H
Sbjct: 79 PLLQIDFVLE-LFEKAKA-KGVHTV-LDTSGNPFTIEQPFFDKLQKLLAVTDLILLDIKH 135
Query: 213 AN---HPYEFSEEAIAAI----SRLANAGIILLSQSVLLKGINDDPEILANLM---RTFV 262
+ H E + + A I L+ + + VL+ GINDD L L +
Sbjct: 136 IDALAH-KELTGQDNANILAFARYLSEIQKPVWIRHVLVPGINDDEAQLKRLSVFIKELS 194
Query: 263 ---ELRIKPY 269
+ + PY
Sbjct: 195 NVERVEVLPY 204
>gi|194335250|ref|YP_002017044.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194307727|gb|ACF42427.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 428
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 29/187 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
P I ++ C + C C V S +V T L I E + I E+ F+G
Sbjct: 96 PQTIFWEVTSRCNLQCLHC-----VVSAGESVTHDLSTRRCLELIDEWAAIGVQEITFSG 150
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL L++ L L + L + + ++ + K G V I++
Sbjct: 151 GEPL------LREDLFELAAAAKQRNLTI---SMATNGTLMTRDVARRCKALGFDVQISL 201
Query: 212 HANHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ E + + I + G+ L +VL K DD L L+
Sbjct: 202 DGSTAEIYGAVRGRKEAFADVMEGIRNTLSEGVNLTVGTVLTKNNVDDIPELLKLVE--- 258
Query: 263 ELRIKPY 269
I PY
Sbjct: 259 RSGI-PY 264
>gi|315928738|gb|EFV08014.1| uncharacterized protein family UPF0004 family protein
[Campylobacter jejuni subsp. jejuni 305]
Length = 255
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 137 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 189
Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E
Sbjct: 190 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 245
Query: 207 VYIAIHANH 215
++ I H
Sbjct: 246 RHLHIALQH 254
>gi|308070144|ref|YP_003871749.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681]
gi|305859423|gb|ADM71211.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681]
Length = 371
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148
H P ++ ++ C + C C R E L+ ++ + + I E V+
Sbjct: 11 HTDPFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTLEEGKKLIDQIAEMNHP---LVV 66
Query: 149 FTGGDPLILSH 159
FTGGDPL+
Sbjct: 67 FTGGDPLMRPD 77
>gi|258514901|ref|YP_003191123.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257778606|gb|ACV62500.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 367
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 95 DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEV 147
DR+ + ++C C+FC G + VLS + EA ALA I E+
Sbjct: 54 DRVHFIVNRHINHTNICANRCKFCAFGRDAGDKGAYVLSLDEIEAKALA--SRNENISEI 111
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV 175
GG + +L ++ L+ +K V
Sbjct: 112 HIVGG---LNPDLKLDYYVEALKRVKRV 136
>gi|255525323|ref|ZP_05392263.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|296188191|ref|ZP_06856583.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|255510995|gb|EET87295.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
gi|296047317|gb|EFG86759.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
Length = 436
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 37/189 (19%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFR 114
+Q + KE + E + + Y D R LK+ C +C +C
Sbjct: 115 RKQVVEVKEVMKNNAFEELN-------------IESYQDKTRAFLKIQDGCNRFCSYCLI 161
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-------GDPLILSHKRLQKVLK 167
+ K + E+I +G D + L VL+
Sbjct: 162 -PFARGAVCSKPPEKIISEVKE-LAAH-GFKEIILSGIHTASYGVD--LEEDCSLLSVLE 216
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--PYEFSEEAIA 225
+ I ++ +R S +DPQ +I+ + K + H H E +
Sbjct: 217 QIDKIPGIERVRIGS----IDPQFFTEGVIERISVLKK---LCPHF-HLSLQSGCNETLK 268
Query: 226 AISRLANAG 234
++R AG
Sbjct: 269 RMNRRYTAG 277
>gi|289578151|ref|YP_003476778.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
gi|289527864|gb|ADD02216.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
Length = 726
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ + C C FC +G + S D + + +++ + + + TGG+PLI
Sbjct: 410 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDYKQLVRFLKGNN--YHIQITGGEPLI 463
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-----PVYIAI 211
L +++ L+ H+ + + + + I+ E I+ LKE+ V I
Sbjct: 464 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVGQVSIYA 515
Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245
H +E + I+ + N GI L + VL K
Sbjct: 516 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 555
>gi|168217879|ref|ZP_02643504.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens NCTC 8239]
gi|182380088|gb|EDT77567.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens NCTC 8239]
Length = 473
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKYCNNELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + E + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|89894967|ref|YP_518454.1| hypothetical protein DSY2221 [Desulfitobacterium hafniense Y51]
gi|89334415|dbj|BAE84010.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 332
Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G Q L++ + + L I + + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAK-AGFKIMIFSGGEPLL 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210
+ +++ + LR F + + I E+ + LKEAG + + +
Sbjct: 60 RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108
Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236
+H + +F EEA+ + G+
Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140
>gi|313896883|ref|ZP_07830430.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320530825|ref|ZP_08031863.1| radical SAM domain protein [Selenomonas artemidis F0399]
gi|312974330|gb|EFR39798.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320136911|gb|EFW28855.1| radical SAM domain protein [Selenomonas artemidis F0399]
Length = 333
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 8 TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 64
Query: 160 KRLQKVLKTLRYIK 173
L + L I
Sbjct: 65 IELVAYARGLGLIP 78
>gi|312127785|ref|YP_003992659.1| Radical SAM domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777804|gb|ADQ07290.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 341
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ L + E L I + E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INPNEDV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ +K+L+ + ++ +R +R P I+ E ++ LK
Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTI 113
>gi|253570571|ref|ZP_04847979.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_6]
gi|251839520|gb|EES67603.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 1_1_6]
Length = 164
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72
Query: 142 SQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93
>gi|212697143|ref|ZP_03305271.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
7454]
gi|212675918|gb|EEB35525.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
7454]
Length = 166
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
G + +Y R + C C+ CF +E + G + K T+ ++Y+++
Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNFWTEKQTQEVISYLKKD 62
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+I + GG+P S + L K++K +R
Sbjct: 63 -EIEGLTILGGEPFE-STEDLIKIVKKIRE 90
>gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
Length = 365
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C +MV K +LS ++ E ALA+I+ + ++ TGG+PL
Sbjct: 46 LSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFIRR--GVRKIRITGGEPLH- 102
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKPVYIA 210
+ L +++ L + LR R + R+ + + ++
Sbjct: 103 -RRGLMGLIENLG-----RTLRPAERECGLDELTLTTNATRLAEVAGDLAARGVRRINVS 156
Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ P F A ++ AG+ + +V L+G+N+D
Sbjct: 157 LDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGVNED 204
>gi|304437665|ref|ZP_07397617.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369298|gb|EFM22971.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 378
Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 53 VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 109
Query: 160 KRLQKVLKTLRYIK 173
L + L I
Sbjct: 110 LELVAYARGLGLIP 123
>gi|147677311|ref|YP_001211526.1| Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
gi|146273408|dbj|BAF59157.1| predicted Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
Length = 330
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 41/213 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC+ C+R G++ LS+++ A + I + +IF+GG+PL+
Sbjct: 3 VSWNTTNACNMYCKHCYRDA--GAKAAEELSTEEGLALIDQIAG-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA- 213
+ ++ R + LR F + + I E + LKEAG V + I
Sbjct: 60 RDD--IFTLVARARE----RGLRPVFGTNGTL-----ITGETARRLKEAGAAV-MGISLD 107
Query: 214 -----NHPY-EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
+H + A+ + AG+ + ++ D+ E L V
Sbjct: 108 SVDPKSHDDFRATPGAWQGAVDGMRACREAGLPFQVHTTVMGWNKDEVE---RLTDFAVR 164
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
+ +++ F + I
Sbjct: 165 MGAVGHHIF----------FLVPTGRAVGIAEE 187
>gi|29347409|ref|NP_810912.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides thetaiotaomicron VPI-5482]
gi|29339309|gb|AAO77106.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides thetaiotaomicron VPI-5482]
Length = 164
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
++ YP+ I+ L C +C C E + G +L+ + ++ + I+
Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72
Query: 142 SQIWEVIFTGGDPLILSHKRL 162
+ V F+GGDP L
Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93
>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 341
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ + + E L+ + K + E+ + GG+
Sbjct: 8 IFIPQYGCPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLS--KNKGEDVELAYYGGN-F 64
Query: 156 ILSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
++Q K+L+ R ++++ +R +R P I+ E++ LK+
Sbjct: 65 TAIDIKMQQKLLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTV 113
>gi|188589299|ref|YP_001920259.1| hypothetical protein CLH_0864 [Clostridium botulinum E3 str. Alaska
E43]
gi|188499580|gb|ACD52716.1| conserved hypothetical protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 434
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C FC G+ + K E + E EVI +G
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197
Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L +L+ + I + +R S ++P E+I +K K
Sbjct: 198 TASYGVDLGAGVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250
Query: 209 IAIHA 213
+ H
Sbjct: 251 LCPHF 255
>gi|167753918|ref|ZP_02426045.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216]
gi|167658543|gb|EDS02673.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216]
Length = 344
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 44/228 (19%)
Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
DR L + C + CRFC LS+ + + + E+ ++ V+F G
Sbjct: 101 DRATLCISSQAGCRMGCRFCATGRQ---GLQHSLSTNEILNQIESLPERERLTNVVFMGM 157
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEAG 204
G+PL L +L L + F P RI L + L+
Sbjct: 158 GEPL----DNLDSLLPALEVLTSAWG--FG-----WSPTRITVSTAGVASRLERFLEATQ 206
Query: 205 KPVYIAIH--ANH------PYEFSEEAIAAISRLANAGIILLSQS------VLLKGINDD 250
+ +++H H P E + + L Q +++ G+ND
Sbjct: 207 VHLAVSLHNPFPHERAEIMPIEKAWPIREVVEILRRYDFT--HQRRVSFEYIVMSGLNDS 264
Query: 251 PEILANLMRTFVELRIKPYYL-HHPDLAAGTSHFRLTIEEGQKIVASL 297
P + L R ++ + + H G+ +F +
Sbjct: 265 PRHIRELCRLLDGIKCRINLIRFH--KIPGSPYFS-PDDRAMIAFRDA 309
>gi|94967848|ref|YP_589896.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549898|gb|ABF39822.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
Ellin345]
Length = 375
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 35/212 (16%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P + + C + C C L++ D + + I E + + TGG
Sbjct: 10 KPFIAIWETTQACDLACVHCRACAQPQRSSDE-LTTADAKKLVDEIAEM-AVPVFVLTGG 67
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211
DPL + +++ + +R S P P + E I LKEAG + +++
Sbjct: 68 DPLKRPD--IFEIVGYAAS----RKVRI-SLTPSATP-LLTREAILRLKEAGLARLAVSL 119
Query: 212 HANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + A+ G+ + + + + + + +++
Sbjct: 120 DGPTA-EIHDAFRKVAGSFQWTMDAVRWAREIGLPVQINTTITRH---NFHQIHDVIALL 175
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
+L I + + F + GQ I
Sbjct: 176 EKLDITLWSVF----------FLVPTGRGQDI 197
>gi|71907513|ref|YP_285100.1| radical SAM family protein [Dechloromonas aromatica RCB]
gi|71847134|gb|AAZ46630.1| Radical SAM [Dechloromonas aromatica RCB]
Length = 296
Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
+ ++L + C C FC EM + + ++ + + L I+ + I V
Sbjct: 18 ESLILPVTDGCSWNKCTFC---EMYTAPQKKFVARGE-DEVLESIRLTGLRYGNDIRRVF 73
Query: 149 FTGGDPLILSHKRLQKVLKTLR-YIKHVQIL 178
GD L+L +RL +L+ + ++ V+ +
Sbjct: 74 LADGDALVLPTRRLLTILEAIHTHMPAVRRI 104
>gi|242399892|ref|YP_002995317.1| MooA-like molybdenum cofactor biosynthesis protein A related
[Thermococcus sibiricus MM 739]
gi|242266286|gb|ACS90968.1| MooA-like molybdenum cofactor biosynthesis protein A related
[Thermococcus sibiricus MM 739]
Length = 419
Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 37/185 (20%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
G++ R + I ++ C V C FC E S+ + D + L + E +Q
Sbjct: 108 GLIDRGTNLIQVRGSTGCNVSCIFCSVDEGPYSRTRILDYVVDVDYLLKWFNEVAQFKGK 167
Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
E G G+PL+ + ++++ LR +V ++ S +N +LI+ L E
Sbjct: 168 RLEAHLDGQGEPLVYP--FIVELVQGLRENPNVSVISMQSNG-----ALLNDKLIEELAE 220
Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
AG V ++IH NH E +E L NAGI +L V++
Sbjct: 221 AGLDRVNLSIHSFDPEKAKMLMGMKDYDLNHVLEMAE-------ALINAGIDVLFAPVII 273
Query: 245 KGIND 249
GIND
Sbjct: 274 FGIND 278
>gi|325290323|ref|YP_004266504.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
glycolicus DSM 8271]
gi|324965724|gb|ADY56503.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
glycolicus DSM 8271]
Length = 442
Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C C +C ++ GS + + + +A++ E+ + E+I T D
Sbjct: 147 AYIKIAEGCNNRCSYCVIPQIKGSYRSR--TKESILGEVAWLAEQ-GVKEIIVTAQDTTR 203
Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
L +L + I ++ +R P+ ELI+ +++ K Y+
Sbjct: 204 YGMDIYQGLELANLLAAIAEIDGIEWIRL----LYCYPEVFTDELIEVMRKEPKICKYLD 259
Query: 211 IHANHPY-----EFS-----EEAIAAISRLANA 233
I H E + ++ I++L A
Sbjct: 260 IPLQHANNKILTEMNRRYLKQDVERLINKLRKA 292
>gi|298504362|gb|ADI83085.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
oxidoreductase [Geobacter sulfurreducens KN400]
Length = 428
Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R +P +E+ P R + + RY ++ CP C FC
Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
V G +D + LA I+ +++ D L+ + + +L+ L +
Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPIKARPILRGLAEMD- 233
Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEAI- 224
+R+ S+ + R +PEL++ + ++G HAN + +
Sbjct: 234 ---VRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGSHANMAKSGTRYSQT 286
Query: 225 AAISRLANAGIIL 237
+ R+ +AGIIL
Sbjct: 287 DLMKRVRDAGIIL 299
>gi|293115612|ref|ZP_05792317.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
DSM 2876]
gi|292809090|gb|EFF68295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
DSM 2876]
Length = 444
Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 28/132 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ + +A I+ S EV+ TG
Sbjct: 146 HTRAYVKIQDGCNRFCSYC-----IIPYVRGRIRSRKPDDVMAEIKRVAASGCKEVVLTG 200
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
D S +L V++ + I+ ++ +R S ++P + E ++ L
Sbjct: 201 IHLSSYGLDFKD----STVKLIDVIEAVNRIEGIERIRLGS----LEPLIVTEEFVRRLA 252
Query: 202 EAGKPVYIAIHA 213
+ K I H
Sbjct: 253 KCKK---ICPHF 261
>gi|323698700|ref|ZP_08110612.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio sp.
ND132]
gi|323458632|gb|EGB14497.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
desulfuricans ND132]
Length = 422
Score = 43.2 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 28/182 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
R+ L + C + C +C R+ ++ ++S + A Y ++++ +I
Sbjct: 20 GRVHLPVAPKCNIQCNYCNRKYDCVNESRPGVTSGVLKPFQAAEYMEKVLEKEPRITVAG 79
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQ----------RINPEL 196
G GDP + L+ L KH +++ + + P + +
Sbjct: 80 IAGPGDPFANPAETLE--TMRLLNAKHPELIFCLSTNGMGILPYLDDIAELGVSHVTITI 137
Query: 197 IQCLKEAGKPVY-------IAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIN 248
G +Y + H E + AI L GI + S+++ GIN
Sbjct: 138 SAVDPAIGAQIYAWVKDGNVVYHGEKGAEILLDRQLKAIKGLKERGITVKINSIVIPGIN 197
Query: 249 DD 250
D
Sbjct: 198 DH 199
>gi|325847803|ref|ZP_08170025.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480821|gb|EGC83874.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 432
Score = 43.2 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
R +K+ C +YC +C ++S+D + + + + E++ T
Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196
Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHISKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250
>gi|323476926|gb|ADX82164.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4]
Length = 394
Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
+ S + + + ++ + L G + P E +E R
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193
Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
G +I+ + Q V+L+ IN D + L L+ I P+ +H
Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251
>gi|323474023|gb|ADX84629.1| Radical SAM domain protein [Sulfolobus islandicus REY15A]
Length = 394
Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
+ S + + + ++ + L G + P E +E R
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193
Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
G +I+ + Q V+L+ IN D + L L+ I P+ +H
Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251
>gi|210623789|ref|ZP_03294049.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
gi|210153371|gb|EEA84377.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
Length = 465
Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 48/245 (19%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRRE 116
Q +E+ L EE ++N+ VHR P + L + H C + C++CF ++
Sbjct: 62 QVEEAWDEIANLEEEGL-LYTEDNYQFHPAFVHREPVVKALCLNVAHDCNLKCKYCFAKQ 120
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI- 172
K ++S + + AL ++ S ++ F GG+PL ++ + ++++++ R I
Sbjct: 121 GNFGGKPELMSFEVGKRALDFLVANSGSRRNLDIDFFGGEPL-MNFEVVKQLVEYGRSIE 179
Query: 173 -KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+H + +RF + +N E+I + E V +++ + A++
Sbjct: 180 KEHGKNMRF---TITTNGLLLNDEIIDYINENMHNVVLSL----------DGRKAVNDNM 226
Query: 232 NAGIILLSQSVLLKGIND--DPEILANLMRTFVELRIKP----YYLH------HPDLAAG 279
IND +++ M+ VE R P YY+ + D +
Sbjct: 227 RM------------TINDKGSYDVIVPKMQKLVEKR--PKDKYYYVRGTFTRENLDFSKD 272
Query: 280 TSHFR 284
HFR
Sbjct: 273 ILHFR 277
>gi|182414976|ref|YP_001820042.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177842190|gb|ACB76442.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 351
Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+P + + + C + C C + ++G L+++D I
Sbjct: 5 FPAFVSFTVTNACNLRCAMCGQWSPAGYIRSGRGRRGHPLTAEDWMRLADEAAAH-GIKS 63
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIV 187
++ GG+P +L +Q++L+ L + + I +R+
Sbjct: 64 ILLRGGEPFMLP--GIQRLLEHLHDLGMFISIDTNGTRLAAF 103
>gi|76809653|ref|YP_334300.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710b]
gi|76579106|gb|ABA48581.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710b]
Length = 370
Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 47/197 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
PL+ K L+ +++ L + V + LR SRV +
Sbjct: 100 PLL--RKNLEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL--- 154
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
L L + +H S + + I AG + V+ +G ND
Sbjct: 155 --DALDDTLFKLR---------DHADFASADVLDGIFAAHAAGLAPVKVNMVVKRGTND- 202
Query: 251 PEILANLMRTFVELRIK 267
+ + R F +
Sbjct: 203 -AEIVPMARRFKGTGVV 218
>gi|295706646|ref|YP_003599721.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
DSM 319]
gi|294804305|gb|ADF41371.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
DSM 319]
Length = 452
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG + L ++L+ L +K ++ +R S ++ +I E+I+ L ++ + V
Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254
Query: 210 AIHA 213
+H
Sbjct: 255 HLHI 258
>gi|294501299|ref|YP_003564999.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
B1551]
gi|294351236|gb|ADE71565.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
B1551]
Length = 452
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG + L ++L+ L +K ++ +R S ++ +I E+I+ L ++ + V
Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254
Query: 210 AIHA 213
+H
Sbjct: 255 HLHI 258
>gi|256544964|ref|ZP_05472334.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus vaginalis ATCC 51170]
gi|256399351|gb|EEU12958.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus vaginalis ATCC 51170]
Length = 166
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
G + +Y R + C C+ CF +E + G + + K T+ + Y+++
Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNLWTDKQTQEIITYLKKD 62
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+I + GG+P S + L K++K +R
Sbjct: 63 -EIEGLTILGGEPFE-STEDLIKIVKKIR 89
>gi|153852905|ref|ZP_01994342.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814]
gi|149754547|gb|EDM64478.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814]
Length = 481
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 52/195 (26%)
Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
I + P EE L + +E +D +G + G++ Y C C FCF
Sbjct: 65 IRK---PSGEEWLLEIDKEYDDELGVEFEN---GLMSEYR---------SCSNKCMFCFI 109
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+M + T+ Y ++ + F G+ + +++ + + I H
Sbjct: 110 DQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITMTNMKQADI----DRIIH 152
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
+Q+ PI + ++C +H F+ E + + L A
Sbjct: 153 MQL------APINISVQTTNPELRC---------KMLH----NRFAGEKLKFLQDLYEAH 193
Query: 235 IILLSQSVLLKGIND 249
I + Q VL KG+ND
Sbjct: 194 IEMNGQIVLCKGVND 208
>gi|315651093|ref|ZP_07904127.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
gi|315486683|gb|EFU77031.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
Length = 351
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 33/166 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151
+ C C+ C+ + L S + E TG
Sbjct: 9 WHITDECDQRCKHCY---IFSGGNYNCLKSMSWQEMQDTFNNCLDFCETYGRTPYFYLTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA- 210
GDP++ L L +++ + +P +N ++ + LKE G Y
Sbjct: 66 GDPILHPD---FWKLLELFSENNIKF------TIMGNPFHLNDDVCKKLKEYGCEKYQMS 116
Query: 211 ------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
H P + + I L AGI SV++ ++
Sbjct: 117 IDGIRETHDWFRKPGSYDC-TLEKIGCLNKAGIR----SVIMTTVS 157
>gi|311069144|ref|YP_003974067.1| YqeV protein [Bacillus atrophaeus 1942]
gi|310869661|gb|ADP33136.1| YqeV [Bacillus atrophaeus 1942]
Length = 451
Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L+ L + ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDARVDGLKRIRISS----IEASQITDEVIEVLDRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|86604900|ref|YP_473663.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
JA-3-3Ab]
gi|86553442|gb|ABC98400.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
JA-3-3Ab]
Length = 312
Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 27/165 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + CR+C K + L+ + + + + + I EV TGG+PL+
Sbjct: 16 VSLTDQCNLRCRYCMPLHPEFLDKSSYLTPQQYKEIIGELLDY-GIEEVRITGGEPLVRQ 74
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+V++ L +K + L + ++ R L +A + + +
Sbjct: 75 D--FDEVIQELAKLK-IPSLSLTTNGLLL--HRYWDVL-----KAANVLNLNVSL---DS 121
Query: 219 FSEEAIAAISR-------LAN------AGIILLSQSVLLKGINDD 250
AAI+R L N G L +V+++GIND
Sbjct: 122 LQPSTQAAIARRDCLADILRNIQEGIARGFSLKVNTVVMRGINDC 166
>gi|221198572|ref|ZP_03571617.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
gi|221207801|ref|ZP_03580808.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221172298|gb|EEE04738.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2]
gi|221181023|gb|EEE13425.1| molybdenum cofactor biosynthesis protein A [Burkholderia
multivorans CGD2M]
Length = 367
Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
L ++ C C +C RE+ GS + + A L I + ++ TGG+P
Sbjct: 39 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 98
Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
L+ + L+ +++ L + V + LR +RV + +
Sbjct: 99 LL--RRHLETLIERLAALTTVHGRPVELALTTNGALLAAKARTLRDAGLARVTVSL-DAL 155
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
+ + + + +A PV + A I AG + +V+ +G NDD
Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201
Query: 252 EILANLMRTFVELRI 266
+ L+R F +
Sbjct: 202 -QMLPLVRHFRHTGV 215
>gi|218883344|ref|YP_002427726.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
1221n]
gi|218764960|gb|ACL10359.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
1221n]
Length = 439
Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFCFRREMVGSQ 121
+EE ++ R PI + H P Y RI+ L++ CP C +C V
Sbjct: 143 REEDKVIATGRARPIDLDKHDPFP-----YWRRIINPLEITRGCPYGCLYC----QVSYI 193
Query: 122 KGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLI-------------LSHKRLQKVL 166
G + E + Y++E ++I + F D L L + L +
Sbjct: 194 HGMSYRHRSIEKIVFYVKEMARIGVRDYRFITPDSLSYGLTKISREPDTGLIEELLSSIH 253
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LR I + + S V P+ +N ++++ L++
Sbjct: 254 SALRSIG--GRIFYGSFPSEVRPEHVNKDVVRVLRKY 288
>gi|14520330|ref|NP_125805.1| molybdenum cofactor biosynthesis protein A [Pyrococcus abyssi GE5]
gi|18203544|sp|Q9V2G2|MOAA_PYRAB RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|5457545|emb|CAB49036.1| moaA molybdenum cofactor biosynthesis protein [Pyrococcus abyssi
GE5]
Length = 306
Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + C +C R + + ++ E + I + I +V TGG+P I
Sbjct: 15 ISLTKECNLNCFYCHREGQL--DGERTMKPEEIERIVR-IASRLGIKKVKLTGGEPTIRK 71
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-------------K 205
+ ++++ +R +V L + + L + LKEAG K
Sbjct: 72 D--IVEIIRRIR--PYVVDLSLTTNGTTLY------TLAEELKEAGLDRVNISLDTLDRK 121
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ + ++ I I + + V+++GINDD + +L+R
Sbjct: 122 KYKMITGFD----VLDQVIKGIEKATKLFYPVKLNMVVMRGINDD--EIWDLIR 169
>gi|254556403|ref|YP_003062820.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
JDM1]
gi|254045330|gb|ACT62123.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
JDM1]
Length = 332
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C + C +C +E + VLS + + + +V T
Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG+PL+ + ++++ ++ + + + + +L + LKEAG
Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115
>gi|28378196|ref|NP_785088.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
WCFS1]
gi|38258047|sp|Q88WY1|MOAA_LACPL RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|28271031|emb|CAD63936.1| molybdopterin precursor synthase MoaA [Lactobacillus plantarum
WCFS1]
Length = 332
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C + C +C +E + VLS + + + +V T
Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG+PL+ + ++++ ++ + + + + +L + LKEAG
Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115
>gi|320450824|ref|YP_004202920.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
gi|320150993|gb|ADW22371.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
Length = 375
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 39/222 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP + ++ + C + CR C M G LS+++ + + ++ TG
Sbjct: 8 QYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLGLIEEVATYRPKPLLLLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207
GDPL L +++ R +V P P + E + LKEAG +
Sbjct: 67 GDPLARPD--LLFLIQRARE--------LGLKVGLTPAATP-LLTREKVFQLKEAGVTRL 115
Query: 208 YIAIHANHPYE---FSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+++ P F E +AA+ AG+ + + + ++ + L
Sbjct: 116 ALSLDGASPKSHDAFRGEEGTFARTLAALGWAKEAGLPTQVNTTVTR---ENWPEIQALP 172
Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
E + + L F + + G ++ L +
Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAR 203
>gi|317489825|ref|ZP_07948322.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|316911074|gb|EFV32686.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
Length = 334
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 47/215 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS ++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
+ +++ + LR P+ I PE+ LKEAG
Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108
Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
+ H H Y+ + I A AG+ Q L + D + + + ++
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCDITDF 161
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
VE+ +Y+ F + + G+ I
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186
>gi|282883211|ref|ZP_06291810.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
gi|281297023|gb|EFA89520.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
Length = 431
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149
H+ R +K+ C YC +C +GT+ S + + I+ + E+I
Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCIIPY----ARGTIRSRRIGDCVREAIRLANAGYKEIIL 196
Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
T G D L RL +++ + + ++ +R S V+P I+ + ++
Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246
>gi|229019959|ref|ZP_04176752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
gi|229026193|ref|ZP_04182557.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
gi|228735121|gb|EEL85752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
gi|228741343|gb|EEL91550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
Length = 339
Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRITGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIKAAKEAGLEVKVNMVVKKGMNDH 177
>gi|225567883|ref|ZP_03776908.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
15053]
gi|225163361|gb|EEG75980.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
15053]
Length = 307
Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 31/184 (16%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213
L+++ V+I+ +R P ++ ++I L++ KPV++ +
Sbjct: 98 YAPLPYLRRIFTEAARHPDVRIISIATR-----PDCLDKDVISMLEDIRRIKPVWVELGL 152
Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFV 262
+E + A + L +AGI ++ ++L L G +D ++ + +
Sbjct: 153 QTIHEETAAFIGRGYSLPVFEQAAAMLQDAGIDVIVHTILALPG--EDLSMMLDTLHYLN 210
Query: 263 ELRI---KPYYLHHPDLAAGTSH-----FRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
I K LH A ++ F + + L + G P +L
Sbjct: 211 GAGIQGLKLQLLHVLRGTALAAYYEAHPFWIP---SMEEYFYLLGRCIGSISPDIVLHRL 267
Query: 315 GGYG 318
G G
Sbjct: 268 TGDG 271
>gi|333029185|ref|ZP_08457246.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides coprosuis DSM 18011]
gi|332739782|gb|EGJ70264.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides coprosuis DSM 18011]
Length = 153
Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 88 GIVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
I+H Y + I+ CP C C E + GT+L+ + + + I
Sbjct: 2 NILHTYSETIVDGDGIRYSIYFAGCPHRCVGCHNPESRNPKAGTLLTDEKLDKIIDEINN 61
Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
+ + +GGDP + L
Sbjct: 62 NPLLDGITLSGGDPFFNPIEML 83
>gi|110799003|ref|YP_694570.1| thiamine biosynthesis protein ThiH [Clostridium perfringens ATCC
13124]
gi|110673650|gb|ABG82637.1| putative thiazole biosynthesis protein ThiH [Clostridium
perfringens ATCC 13124]
Length = 473
Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + K L+ + + ++ + G DP+
Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150
Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
L +L ++ I ++ +R R+ + + + LK+
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAATSVEDY-KRLKDAEIGTYILFQET 203
Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
KP Y +H + P A+ R AGI + V L G+ D E LA LM
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262
Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
+ P+ L P + + + E+ +KIVA L+ L P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312
>gi|310780511|ref|YP_003968843.1| ribonucleoside-triphosphate reductase class III activase subunit
[Ilyobacter polytropus DSM 2926]
gi|309749834|gb|ADO84495.1| ribonucleoside-triphosphate reductase class III activase subunit
[Ilyobacter polytropus DSM 2926]
Length = 166
Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C YC+ C E G VL + ++ I + V +GGDP + + L
Sbjct: 24 SGCSHYCQGCHNPETWKGDIGEVLDETYMKKIISQISNNPLLDGVTLSGGDPFFIPEELL 83
Query: 163 QKVLKTLRYIKH 174
L+ L+ H
Sbjct: 84 G-FLRRLKEETH 94
>gi|300858354|ref|YP_003783337.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis
FRC41]
gi|300685808|gb|ADK28730.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206071|gb|ADL10413.1| Predicted Fe-S oxidoreductase [Corynebacterium pseudotuberculosis
C231]
Length = 412
Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147
I H+ P + ++ C + C+ C G + + + A L + + V
Sbjct: 34 INHK-PFIAIWEVTRACGLVCKHCRADAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200
+ TGGDP + L+++++ + ++ P V P R+ E I L
Sbjct: 92 VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136
Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ GK + +++ F A + +AG L S L K +
Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ L++T +E+ K +Y+ F + G + A
Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228
>gi|160879625|ref|YP_001558593.1| molybdenum cofactor biosynthesis protein A [Clostridium
phytofermentans ISDg]
gi|160428291|gb|ABX41854.1| molybdenum cofactor biosynthesis protein A [Clostridium
phytofermentans ISDg]
Length = 332
Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 20/160 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C ++ + ++L+ ++ I ++ TGG+P++
Sbjct: 14 ISITDRCNLRCTYCMPEDVEKLEHESILTYEEILRICKS-ASSLGIRKIKITGGEPMVRK 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA---GKPVYIAI---- 211
K++ ++ I ++ + + + E ++ L + G V +
Sbjct: 73 DAV--KLMANIKAIPGIEFVTLTTNGV------LLEEHVEELAKIPLDGVNVSLDTLNTD 124
Query: 212 ---HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
EF + I +L AGI V KG+N
Sbjct: 125 TFKKITRRDEFLK-VWNGIQKLIEAGIPTKINCVPQKGVN 163
>gi|292670086|ref|ZP_06603512.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
gi|292648274|gb|EFF66246.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
Length = 346
Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 21 TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 77
Query: 160 KRLQKVLKTLRYIK 173
L + L I
Sbjct: 78 LELVSYARGLGLIP 91
>gi|238059271|ref|ZP_04603980.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
gi|237881082|gb|EEP69910.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
Length = 399
Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 31/169 (18%)
Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWE 146
P L +HV C + C FC G+ V + + E + +
Sbjct: 43 PRDALFLYVHVPFCEMRCGFCNLFTRTGAPAEQVTAYLRQLRRQAERVADALGGDPRHAR 102
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCL 200
V F GG P L+ L ++ + +R+P V P P+ + L
Sbjct: 103 VAFGGGTPTYLTAGELTELFD-------IATSTLGARLPGVPLSVETSPATATPDRLAVL 155
Query: 201 KEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
G V I + A P + E AA+ + +A I LL+
Sbjct: 156 AAHGATRVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDAAIPLLN 203
>gi|78222094|ref|YP_383841.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
gi|78193349|gb|ABB31116.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
Length = 431
Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 17/127 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R L++ + C +C +C G + S + A + + EV+ T
Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPYARGRSRSVSFS--EALAGIRNFAAQ-GFREVVLTGIH 196
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + L +L+ K V LR S V+P + L+ L + +
Sbjct: 197 LGAYGLD--LAPPTNLLALLEASEAEKAVPRLRVGS----VEPNELTDALVDFLARS-ET 249
Query: 207 VYIAIHA 213
V +H
Sbjct: 250 VCPHLHI 256
>gi|284996927|ref|YP_003418694.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
gi|284444822|gb|ADB86324.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
Length = 394
Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 93/234 (39%), Gaps = 32/234 (13%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
+ S + + + ++ + L G + P E ++ + +
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLISLGLTYAQIT-LDGPKEVHDKRRFFVRGRGSF 198
Query: 234 GIILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
+I+ + Q V+L+ IN D + L L+ I P+ +H
Sbjct: 199 DVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251
>gi|241676232|ref|XP_002400329.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
scapularis]
gi|215504220|gb|EEC13714.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
scapularis]
Length = 381
Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R + + L C + C +C E V L S D LA + + +V TG
Sbjct: 62 RKHSYLRISLTEKCSLRCVYCMPAEGVPLTPNEKLLSSDEIVHLATLFATFGVNKVRLTG 121
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL+ +++ L I ++ L + + + LK+AG
Sbjct: 122 GEPLVRKDTL--DIVEKLSQIPQLETLGMTTNGLV------LSRKLADLKKAGL-----T 168
Query: 212 HAN 214
H N
Sbjct: 169 HLN 171
>gi|300813542|ref|ZP_07093873.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512290|gb|EFK39459.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 431
Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 21/117 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149
H+ R +K+ C YC +C + +GT+ S + + I+ + E+I
Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCI----IPYARGTIRSRRIGDCVREAIRLANAGYKEIIL 196
Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
T G D L RL +++ + + ++ +R S V+P I+ + ++
Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246
>gi|89097965|ref|ZP_01170852.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
B-14911]
gi|89087467|gb|EAR66581.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
B-14911]
Length = 309
Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 32/146 (21%)
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--- 178
K +LS ++ E + + I + TGG+PL+ L ++++ L I V +
Sbjct: 15 KDQLLSFEEIEKLASVFAKAFGIQKFRLTGGEPLMRKD--LPQLVEKLSSIPGVDDIAMT 72
Query: 179 -------RF-------HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
R+ R + ++ EL + G V ++ +
Sbjct: 73 TNGILLPRYAKELKSAGLRRVSISLDSLDDELFGKINGRGIKV-------------DQVL 119
Query: 225 AAISRLANAGIILLSQSVLLKGINDD 250
I A AG+ + V+ KG+ND
Sbjct: 120 KGIDAAAEAGLKVKINMVVQKGVNDH 145
>gi|119356260|ref|YP_910904.1| RNA modification protein [Chlorobium phaeobacteroides DSM 266]
gi|119353609|gb|ABL64480.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides
DSM 266]
Length = 446
Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 25/150 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C C +C R +++ A Y E++
Sbjct: 146 RTRAFLKIQDGCDYGCAYCTIPFARGRSRSFSPDDIIAQASALVASGY-------REIVL 198
Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG GD RL +L+ L + V +R S ++P ++ LI + +
Sbjct: 199 TGVNIGD-YRYRGVRLAALLRMLEKVP-VARIRISS----IEPDILDDALIAVVAASE-- 250
Query: 207 VYIAIHANHPYE--FSEEAIAAISRLANAG 234
IA H + P + A R AG
Sbjct: 251 -IIAPHFHLPLQSGSDAVLRAMCRRYDTAG 279
>gi|212550840|ref|YP_002309157.1| hypothetical protein CFPG_483 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549078|dbj|BAG83746.1| conserved hypothetical protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 477
Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
++ C C +C + +KG +S + + I E I ++ F GG+PL
Sbjct: 92 MIVPTVRCNSNCIYCQASKKNLIEKGFDMSKGIAKKIVKMIFESPSSIIKIEFQGGEPLT 151
Query: 157 LSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ + +Q +++ +I KH++ + + + I P++++ LK+ +
Sbjct: 152 -NFEMVQYIMEEAEWINLFKKKHLEFV-ICTNI-----SLITPKILRYLKKHKCHI 200
>gi|331084033|ref|ZP_08333140.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330402395|gb|EGG81965.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 491
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ + I + D I + P++ +YP + + ++ C +C +C + G ++
Sbjct: 172 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 226
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176
+ KD + + + + EV+ G + + K L + +L + I+ ++
Sbjct: 227 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 282
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+RF + P+ ++ ELI+ +K + K + +H
Sbjct: 283 RIRFMTSH----PKDLSDELIEVMKNS-KKICKHLH 313
>gi|313900870|ref|ZP_07834360.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
HGF2]
gi|312954290|gb|EFR35968.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
HGF2]
Length = 362
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 62/204 (30%), Gaps = 43/204 (21%)
Query: 90 VHRYP-----DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
HRY R L++ + C C +C R + L +D
Sbjct: 46 AHRYYGNKVYTRGLIEFSNYCRNDCYYCGIRRSNSHAQRYRLKKEDILTCCDEGYNLGFR 105
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA- 203
V+ +G D + + L +++ ++ R P I L + KE+
Sbjct: 106 TFVLQSGEDGYY-TDELLIEIITDIKR-----------RYPDCA---ITLSLGEKEKESY 150
Query: 204 -------------GKPVYIAIHAN--HPYEFSEEAIAAISRLANA-------GIILLSQS 241
A H HP E + E + A GI++ S S
Sbjct: 151 QCYYDAGADRYLLRHETSNAQHYRCLHPKELTSEHRKQCLKDLKAIGFQTGCGIMVGSPS 210
Query: 242 VLLKGINDDPEILANLMRTFVELR 265
LK I +D + L V +
Sbjct: 211 QTLKHIVEDLHFMKELQPEMVGIG 234
>gi|238927734|ref|ZP_04659494.1| radical SAM [Selenomonas flueggei ATCC 43531]
gi|238884450|gb|EEQ48088.1| radical SAM [Selenomonas flueggei ATCC 43531]
Length = 384
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ + C +YC C+R G + LS+++ + L I + + +IF+GG+PL
Sbjct: 59 VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 115
Query: 160 KRLQKVLKTLRYIK 173
L + L I
Sbjct: 116 IELVAYARGLGLIP 129
>gi|269797767|ref|YP_003311667.1| radical SAM protein [Veillonella parvula DSM 2008]
gi|269094396|gb|ACZ24387.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
Length = 399
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
CP C FC + + G + L+ + + + Y+ + + WEV F GG
Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68
Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
K LQ +L + + +R +R P + E I L+ G K V +
Sbjct: 69 TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123
Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + H + E + A++RL + + + Q LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165
>gi|154148690|ref|YP_001406630.1| hypothetical protein CHAB381_1072 [Campylobacter hominis ATCC
BAA-381]
gi|153804699|gb|ABS51706.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
Length = 414
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 16/130 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQI----W 145
+ + +K+ C C +C + G + L ++ + +A ++I
Sbjct: 130 KSHTKAFIKIQEGCDFNCSYCIIPSVRGKSRSVDENLIIEEVKKIIA--GNHTEIVLTGT 187
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ G D + L ++L+ L I ++ +R S ++P +I+ + + L E
Sbjct: 188 NIGSYGKD----NGSSLGELLQKLGKISGLKRIRLGS----IEPSQIDEKFREILDEPWL 239
Query: 206 PVYIAIHANH 215
++ I H
Sbjct: 240 EKHLHIALQH 249
>gi|326389860|ref|ZP_08211424.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
200]
gi|325994128|gb|EGD52556.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
200]
Length = 455
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D + L ++ S E++ T
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L + L ++K + I ++ +R S P E ++ +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268
Query: 205 K 205
K
Sbjct: 269 K 269
>gi|307266431|ref|ZP_07547967.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306918539|gb|EFN48777.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 455
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D + L ++ S E++ T
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L + L ++K + I ++ +R S P E ++ +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268
Query: 205 K 205
K
Sbjct: 269 K 269
>gi|256751980|ref|ZP_05492850.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
CCSD1]
gi|320116201|ref|YP_004186360.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256749185|gb|EEU62219.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
CCSD1]
gi|319929292|gb|ADV79977.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 455
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D + L ++ S E++ T
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L + L ++K + I ++ +R S P E ++ +
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268
Query: 205 K 205
K
Sbjct: 269 K 269
>gi|167039974|ref|YP_001662959.1| MiaB-like tRNA modifying protein [Thermoanaerobacter sp. X514]
gi|300914064|ref|ZP_07131380.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
gi|307724703|ref|YP_003904454.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
gi|166854214|gb|ABY92623.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X514]
gi|300888999|gb|EFK84145.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
gi|307581764|gb|ADN55163.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
Length = 449
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D + L ++ S E++ T
Sbjct: 155 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 209
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L + L ++K + I ++ +R S P E ++ +
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 262
Query: 205 K 205
K
Sbjct: 263 K 263
>gi|167037786|ref|YP_001665364.1| MiaB-like tRNA modifying protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166856620|gb|ABY95028.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 467
Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
R +K+ C YC +C + + S+D + L ++ S E++ T
Sbjct: 173 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 227
Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L + L ++K + I ++ +R S P E ++ +
Sbjct: 228 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 280
Query: 205 K 205
K
Sbjct: 281 K 281
>gi|153951587|ref|YP_001397915.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
269.97]
gi|152939033|gb|ABS43774.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
269.97]
Length = 416
Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L E
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDETWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|269837323|ref|YP_003319551.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
20745]
gi|269786586|gb|ACZ38729.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
20745]
Length = 449
Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 33/156 (21%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI 138
++ P++ + R R ++K+ C +C +C G+ + + + + A+
Sbjct: 137 DSDEPVEHVETR--TRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQEAID-- 192
Query: 139 QEKSQIWEVIFTGGDPLILSHK------RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
EV+ TG RL +L+ + ++ LR S V P I
Sbjct: 193 ---EGYREVVLTGTHVGTYKWPEGDRTLRLADLLELVLEATTIERLRVTS----VGPHEI 245
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
+ I NHP + A+
Sbjct: 246 DERFIAL-------------VNHPR-MAPHLHMALQ 267
>gi|237737408|ref|ZP_04567889.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
mortiferum ATCC 9817]
gi|229421270|gb|EEO36317.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
mortiferum ATCC 9817]
Length = 324
Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C++C +++V K +LS ++ + I I ++ TGG+PL+
Sbjct: 14 LSITDRCNLRCKYCMGDKDIVFLPKDELLSVEEIGRVIK-IFSDLGIKKIRITGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
+ + +++T+ I+ ++ + + R++ EL + LK+ + I +
Sbjct: 72 -RRNFRDIVETINNIEDIEEINITTNGI-----RLSEEL-EFLKDKKIH-SLNISLDTLK 123
Query: 217 ----YEFS--EEAIAAISRLANAGIIL------LSQSVLLKGINDD 250
E + + + L A I L L+ VL++G ND
Sbjct: 124 KDLFKEITGGGDLDKVLFSLHRA-IELKFKRIKLN-VVLVRGKNDS 167
>gi|237730471|ref|ZP_04560952.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
gi|226906010|gb|EEH91928.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
Length = 445
Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC--FR 114
R IP +EL + + + P R++ + C +C FC ++
Sbjct: 30 WRGAIPVAKELLSQTWQ------EVINQPTPP-----RKRLVYLHIPFCATHCTFCGFYQ 78
Query: 115 REMVGSQKGTVLSS--KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
++ ++ E A + + + + I V F GG P LS + L +++ LR
Sbjct: 79 NRFEEDNCALYTNALLREIEMEADSALHQSAPIHAVYFGGGTPSALSAQDLARIITALRD 138
Query: 172 ---IKHVQILRFHSRVPIVDPQRINP 194
+ + RV D RI+
Sbjct: 139 KLPLAPDCEITIEGRVLNFDDARIDA 164
>gi|303245617|ref|ZP_07331900.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
JJ]
gi|302492880|gb|EFL52745.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
JJ]
Length = 432
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 19/179 (10%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118
EL+++P +G + +P P LK+ C CR+C R ++
Sbjct: 105 LPTELDLIPGRLATALGADADAPAGRRSSTPPSYAYLKIAEGCDHACRYCTIPAIRGKLA 164
Query: 119 GSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+++ + + +Q +V G D + + L+ +L+ L + +
Sbjct: 165 SRPIDGLITEAKGLIDQGARELVLVAQ--DVTAYGRDLGM--KEGLKALLEKLLPLPGLS 220
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233
LR + P + L+ L AG+P Y I H E +AA++R A
Sbjct: 221 WLRL----LYLYPSGVTESLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272
>gi|121534710|ref|ZP_01666531.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
gi|121306730|gb|EAX47651.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
Length = 327
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 32/214 (14%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C C+R G+++ L++ + + L I + + +I +GG+PL+
Sbjct: 7 TTQACNINCLHCYRDA--GAKRADELTTAEGKKLLGEIAK-AGFKIMILSGGEPLLRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVY-IAI------ 211
+ ++++ R + LR + ++ P E+ + LK+AG V I+I
Sbjct: 63 -IYELIRHARAVG----LRPVIGTNGTLIAP-----EVAKKLKDAGLAVAGISIDSLDRS 112
Query: 212 HANHPYEFSEE---AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
H +H S + I AG+ + + + + + VEL
Sbjct: 113 HHDHFRGCSGAWEQTLRGIEACRQAGLPFQIHTTVTSW---NEHEILAITDKAVELGAIA 169
Query: 269 YYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKI 301
+++ G T++ Q +L E+I
Sbjct: 170 HHIFFLVPTGRGKDIEDTTLKTAQ--YEALLERI 201
>gi|86152771|ref|ZP_01070976.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612428|ref|YP_001000685.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005607|ref|ZP_02271365.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
81-176]
gi|85843656|gb|EAQ60866.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249241|gb|EAQ72202.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
81-176]
Length = 416
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|329725446|gb|EGG61929.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU144]
Length = 448
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + K E A + S E++ TG
Sbjct: 142 RTRDSLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250
Query: 207 VYIAIHA 213
V +H
Sbjct: 251 VVRHLHI 257
>gi|322807272|emb|CBZ04846.1| miab family protein, possibly involved in tRNA or rRNAmodification
[Clostridium botulinum H04402 065]
Length = 432
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K E + ++ K
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|168179386|ref|ZP_02614050.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
gi|182669715|gb|EDT81691.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
Length = 432
Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K E + ++ K
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|15669097|ref|NP_247902.1| chondro-6-sulfatase regulatory protein [Methanocaldococcus
jannaschii DSM 2661]
gi|3334424|sp|Q58317|Y907_METJA RecName: Full=Uncharacterized protein MJ0907
gi|1591581|gb|AAB98909.1| chondro-6-sulfatase regulatory protein isolog [Methanocaldococcus
jannaschii DSM 2661]
Length = 286
Score = 42.8 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ G+ H ++LK+ + C + C +C+ + A+ Y+
Sbjct: 2 VDGMKH-----LILKVTNRCNLNCIYCYANNKNNKDMDFKTAK----NAIDYLLNLDNQI 52
Query: 146 EVIFTGGDPLILSHKRLQKVLK 167
++ FTGG+PL L+ ++K++
Sbjct: 53 KIQFTGGEPL-LNFNLIEKIVD 73
>gi|167586605|ref|ZP_02378993.1| molybdenum cofactor biosynthesis protein A [Burkholderia ubonensis
Bu]
Length = 370
Score = 42.8 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 81 NNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131
H+P G++H R L + + C C +C F ++ +L+ ++
Sbjct: 20 AAHTP-DGLLHDTLARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTLEEI 78
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 79 ERIARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|326791250|ref|YP_004309071.1| ribosomal protein S12 methylthiotransferase rimO [Clostridium
lentocellum DSM 5427]
gi|326542014|gb|ADZ83873.1| Ribosomal protein S12 methylthiotransferase rimO [Clostridium
lentocellum DSM 5427]
Length = 448
Score = 42.8 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 24/159 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
+K+ C +C +C ++ G + + +A + + + E+I D
Sbjct: 150 AYVKISEGCDKHCTYCIIPKLRGKYRSRQMDK--IKAEVEKLAAD-GVSEIILVAQDTTE 206
Query: 154 -PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
L + L K+L L I+ ++ +R V P+ I ELI+ +K K Y+ I
Sbjct: 207 YGRDLENASLAKLLHELGEIEGIEWIR----VLYCYPESITDELIEEIKTNPKVCKYLDI 262
Query: 212 HANHP-----YEFS-----EEAIAAISRLANA--GIILL 238
H + E+ + +L GI L
Sbjct: 263 PIQHASTAILKRMARKSSLEQLKERLGKLRQEIPGIALR 301
>gi|315645963|ref|ZP_07899084.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
V453]
gi|315278724|gb|EFU42038.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
V453]
Length = 447
Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + S + A + E++ TG
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IQQAHQLVGA--GYKEIVLTGIH 198
Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD L RL +L L + ++ +R S ++ +I+ +++ L + K +
Sbjct: 199 TGGYGD--DLEEYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSTK-M 251
Query: 208 YIAIHA 213
+H
Sbjct: 252 CRHLHI 257
>gi|321314705|ref|YP_004206992.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
gi|291483457|dbj|BAI84532.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
BEST195]
gi|320020979|gb|ADV95965.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
Length = 501
Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ +++E ++ + F GG P ++ + + + + + R V+ +R + V P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + L + + I P + E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307
>gi|154505306|ref|ZP_02042044.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
gi|153794349|gb|EDN76769.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
Length = 440
Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C +C +C ++ G+ + + + + Y+ E+ ++ L
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLLSEAEYLAEQGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
K L K+L+ L I ++ +R P+ I ELIQ +KE K Y+ +
Sbjct: 204 GKDLYGEKSLHKLLRELCKISGIRWIRI----LYCYPEEIYDELIQTIKEEPKICHYLDL 259
Query: 212 HANHPY-EF---------SEEAIAAISRLAN 232
H E +E I IS+L
Sbjct: 260 PIQHANDEILKRMGRRTTKQELIDIISKLRR 290
>gi|225175074|ref|ZP_03729070.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
gi|225169250|gb|EEG78048.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
Length = 431
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C +C + ++ + AA A + E++ +
Sbjct: 140 RTRAFLKVQEGCRQFCSYCI---VPYARGPLHSRPPEDAAAEAERLAEQGFSEMVLSGVH 196
Query: 151 ----GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L + L +++ L I+ ++ +R S ++P I P+LI+ L + K
Sbjct: 197 LGSYGED---LPGELALSDLIRELVTIEKIRRIRISS----IEPTEITPDLIEVLLDYPK 249
Query: 206 PVYIAIHA 213
V +H
Sbjct: 250 -VCRHLHI 256
>gi|225389119|ref|ZP_03758843.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
DSM 15981]
gi|225044818|gb|EEG55064.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
DSM 15981]
Length = 378
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +YP + + ++ C +C +C + G ++ ++ + + + E++
Sbjct: 191 VERKYPFKSGVNIIFGCNNFCSYCIVPYVRGRERSRRP--EEILKEVKRLAAD-GVVEIM 247
Query: 149 FTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G + + K L++ +L+ + I ++ +RF + P+ ++ ELI+ + +
Sbjct: 248 LLGQN-VNSYGKNLEEPMTFAQLLREVEKIDGIERIRFMTSH----PKDLSDELIEVMSQ 302
Query: 203 AGKPVYIAIH 212
+ K + +H
Sbjct: 303 S-KKICRHLH 311
>gi|196015044|ref|XP_002117380.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
gi|190580133|gb|EDV20219.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
Length = 590
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGT 124
E+ E D G R D + + L C + C++C E VG + +
Sbjct: 40 EVKPFSEFLTDSFG------------RKHDYLRISLTERCNLRCQYCMPSEGVGLTPQER 87
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+L++ + L+ + + ++ TGG+PL+ L +++ + I + ++
Sbjct: 88 LLTADEIIK-LSQLFASEGVTKIRLTGGEPLVRRD--LIDIVREINLIPGIDVI 138
>gi|296242016|ref|YP_003649503.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094600|gb|ADG90551.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
Length = 305
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 33/186 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C +C +C+ +G + T S+ + + LA +++ S I + T DP
Sbjct: 32 LHPYTGCSHFCLYCYATSYIGRKPSTPKSNFLESLKTDLAKVEKGSIIE--LSTSSDPY- 88
Query: 157 LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+++ + L H ++ I RI + L ++ + I
Sbjct: 89 ---PPIEEWVGLTRNTLLLLRDH------GMKILITTKSRIVERDVDILSKS--HAAVMI 137
Query: 212 HANH-----PYEFSEEAI------AAISRLANAGIILLSQS-VLLKGINDDPEILANLMR 259
A I L + G+ + + ++ G+NDDP L L+
Sbjct: 138 TITTLDREVSRRLEPGAASPEDRLRTIQYLKDHGVPVGVRIDPVIPGVNDDPLELKELVD 197
Query: 260 TFVELR 265
V+
Sbjct: 198 AVVDAG 203
>gi|225017551|ref|ZP_03706743.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
DSM 5476]
gi|224949701|gb|EEG30910.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
DSM 5476]
Length = 441
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 27/168 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C C +C + G + L +D ++ S + E+I D
Sbjct: 147 AYLKIAEGCDNNCTYCAIPAIRGPYRSRKL--EDIVEEAEWLAS-SGVKELIVVAQDTTR 203
Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
+L ++L+ L I +R V P+ + EL+ L E K YI
Sbjct: 204 YGSDLYGELKLPELLRRLCQIDGFVWIR----VLYCYPEMVTDELLDVLAEEPKMAKYID 259
Query: 211 I---HAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
I H N H EE ++ + R+ I L + L+ G
Sbjct: 260 IPIQHINSAVLRRMHRRSTREEILSVVQRVRERVPNITLR--TTLIAG 305
>gi|91773394|ref|YP_566086.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
6242]
gi|91712409|gb|ABE52336.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242]
Length = 403
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 26/146 (17%)
Query: 92 RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148
+Y P+ + ++ C C C M G + + K + AL +
Sbjct: 100 KYVPETVSFEITRNCNCNCEHCI---MSGGEGDLDTATIKKAIDEALD-----MGAVVIT 151
Query: 149 FTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
FT GDPL+ L + + + I V I + + PE+ Q LK+ G
Sbjct: 152 FTEGDPLLREDIFELIEYVDKDKAI--VNIYTPGTEM--------TPEVAQKLKDTGLHN 201
Query: 208 YIAIHANHPYEFSEEAIAAISRLANA 233
+ + E ++ +L A
Sbjct: 202 LLVSIYSTV----PEEHDSVRKLKGA 223
>gi|15894987|ref|NP_348336.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
gi|15024675|gb|AAK79676.1|AE007680_9 Fe-S oxidoreductase, related to NifB/MoaA family with PDZ
N-terminal domain [Clostridium acetobutylicum ATCC 824]
gi|325509124|gb|ADZ20760.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
Length = 437
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 37/167 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L C C FCF ++ + T+ D ++ L+++Q V T +
Sbjct: 80 ILDSAKSCRNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----NM 129
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
S + +++K I + I V +P+ L++
Sbjct: 130 SDDDIDRIIK--YRISPINI-----SVQTTNPE---------LRKKMLN----------N 163
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
+F+ + + +L+NAGI + Q VL GIN E + + +L
Sbjct: 164 KFAGNLMERMKKLSNAGITMNCQVVLCPGIN-SGEEFSKTVNDLYKL 209
>gi|16079597|ref|NP_390421.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. subtilis str. 168]
gi|221310468|ref|ZP_03592315.1| hypothetical protein Bsubs1_13906 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314791|ref|ZP_03596596.1| hypothetical protein BsubsN3_13822 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319714|ref|ZP_03601008.1| hypothetical protein BsubsJ_13743 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323991|ref|ZP_03605285.1| hypothetical protein BsubsS_13877 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|1730990|sp|P54462|YQEV_BACSU RecName: Full=Putative methylthiotransferase yqeV
gi|1303812|dbj|BAA12468.1| YqeV [Bacillus subtilis]
gi|1890061|dbj|BAA12080.1| YqeV [Bacillus subtilis]
gi|2634989|emb|CAB14485.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. subtilis str. 168]
gi|291484990|dbj|BAI86065.1| hypothetical protein BSNT_03787 [Bacillus subtilis subsp. natto
BEST195]
Length = 451
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L L ++ V+ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVNHLHI 258
>gi|119718600|ref|YP_925565.1| radical SAM domain-containing protein [Nocardioides sp. JS614]
gi|119539261|gb|ABL83878.1| Radical SAM domain protein [Nocardioides sp. JS614]
Length = 381
Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 27/135 (20%)
Query: 81 NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ ++ + H DR L+ + C + CR C R + L+++ +A L
Sbjct: 7 ADQRAVRQLHHDPGDRPLITIWEVTRACALVCRHC-RADAQTRADPRQLTTEQGKALLDD 65
Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDP 189
I + + V+ TGGDP L ++ +R+ + + P V P
Sbjct: 66 IAGFGKPYPIVVLTGGDPFERPD--LAEL------------VRYGTALGLHVALSPSVTP 111
Query: 190 QRINPELIQCLKEAG 204
R+ P+++ L+ AG
Sbjct: 112 -RLTPDVLAELRAAG 125
>gi|296333299|ref|ZP_06875752.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675196|ref|YP_003866868.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296149497|gb|EFG90393.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413440|gb|ADM38559.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 451
Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L L ++ V+ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVNHLHI 258
>gi|187477325|ref|YP_785349.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
gi|115421911|emb|CAJ48431.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
Length = 360
Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 60/254 (23%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDT 131
P+ D PL+ + + + C C +C R++ + +LS ++
Sbjct: 24 PLRDQRGRPLRDLR--------ISVTDRCNFRCTYCMPRDVFDASYRFMPHSALLSFEEI 75
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
A ++ TGG+PL+ + K++ L + R P P
Sbjct: 76 TRAARVFTRLGT-EKIRLTGGEPLLRKD--VDKLIAMLADL----------RTPQGLPLD 122
Query: 192 IN----PELIQC----LKEAGK-PVYIAIHANHPYEF--------SE-EAIAAISRLANA 233
+ L+ LK AG V +++ A P F + + + I A A
Sbjct: 123 LTLTTNASLLARKASALKAAGLGRVTVSLDALDPGRFKQLADADYTPSDVLRGIDAAAAA 182
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
G+ + V+ +G+NDD + L R F H + + G +
Sbjct: 183 GLPVKVNMVVRRGVNDD--QILPLARHFRHSG------HVLRFI---EYMDVGNSNGWNL 231
Query: 294 VA-----SLKEKIS 302
L ++S
Sbjct: 232 AEVLPSAELIARLS 245
>gi|16081159|ref|NP_388865.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308821|ref|ZP_03590668.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313144|ref|ZP_03594949.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318068|ref|ZP_03599362.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322343|ref|ZP_03603637.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|59799598|sp|Q796V8|HEMZ_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 2;
Short=Coprogen oxidase; Short=Coproporphyrinogenase
gi|32468726|emb|CAB12823.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 501
Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ +++E ++ + F GG P ++ + + + + + R V+ +R + V P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + L + + I P + E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307
>gi|228987980|ref|ZP_04148086.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771784|gb|EEM20244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 339
Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|222098198|ref|YP_002532255.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
gi|221242256|gb|ACM14966.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
Length = 334
Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 15 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 74 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172
>gi|206977358|ref|ZP_03238255.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|217962214|ref|YP_002340784.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
gi|206744509|gb|EDZ55919.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
H3081.97]
gi|217067222|gb|ACJ81472.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
Length = 337
Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|23099419|ref|NP_692885.1| hypothetical protein OB1964 [Oceanobacillus iheyensis HTE831]
gi|22777648|dbj|BAC13920.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 450
Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + E A ++ E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWSRGLLR-SRDPKNVIEQATKLVKA--GYKELVLTGIH 198
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D + +L+ L ++ ++ +R S ++ +I E+I + ++ K
Sbjct: 199 TAGYGED---MKDYNFAMLLRELEEVEGLERIRISS----IEASQITDEVIDVIDQSNK- 250
Query: 207 VYIAIHA 213
+ +H
Sbjct: 251 IVRHLHV 257
>gi|47565151|ref|ZP_00236194.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
gi|47557937|gb|EAL16262.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
G9241]
Length = 337
Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175
>gi|260173948|ref|ZP_05760360.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
gi|315922216|ref|ZP_07918456.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
gi|313696091|gb|EFS32926.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D2]
Length = 152
Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E G L+ + ++ + I+ + V F+GGDP + L
Sbjct: 25 GCSHHCLGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83
>gi|257460123|ref|ZP_05625227.1| radical SAM domain protein [Campylobacter gracilis RM3268]
gi|257442564|gb|EEV17703.1| radical SAM domain protein [Campylobacter gracilis RM3268]
Length = 275
Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 36/184 (19%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148
R+ L + C + C FC R ++ ++ + + A Y++ + I +
Sbjct: 24 GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83
Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191
G GDP+ + K L L +HV I+R V
Sbjct: 84 IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143
Query: 192 INPELIQCLKEAGKPVYIAIHAN---HPYE----FSEEAIAAISRLANAGIILLSQSVLL 244
+ P++ GK H N H E E I +L A +I+ +V++
Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYHGEEGARILGERQEEGIRKLKEARMIVKINTVVI 197
Query: 245 KGIN 248
G+N
Sbjct: 198 PGVN 201
>gi|138894331|ref|YP_001124784.1| molybdenum cofactor biosynthesis protein A [Geobacillus
thermodenitrificans NG80-2]
gi|196248059|ref|ZP_03146761.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
G11MC16]
gi|134265844|gb|ABO66039.1| Molybdenum cofactor biosynthesis protein A [Geobacillus
thermodenitrificans NG80-2]
gi|196212843|gb|EDY07600.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
G11MC16]
Length = 341
Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 38/174 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L ++ C C +C E+ G +G +L+ ++ A L+ + + ++ TGG+
Sbjct: 22 LSVIDQCNFRCIYCMPAEVFGPNFRFLAEGELLTVEEM-ALLSECFVELGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQR---------------INPEL 196
PL+ L ++ L I ++ + + + QR ++ ++
Sbjct: 81 PLLRRD--LDALVARLSAIPGLRDIGLTTNGVHLVKWAQRLKEAGLKRVNVSLDALDDDI 138
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G V + I AG+ + V+ KG ND
Sbjct: 139 FRKMNGIGVGVA-------------PVLKGIEAARAAGLGVKVNMVVKKGWNDS 179
>gi|187778464|ref|ZP_02994937.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
15579]
gi|187772089|gb|EDU35891.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
15579]
Length = 432
Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K E + ++ K
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKVMEEVRKLSKHGFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEDIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245
Query: 201 KEAGKPVYIAIHA 213
+ K H
Sbjct: 246 SKLKK---FCPHF 255
>gi|325829809|ref|ZP_08163267.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Eggerthella sp. HGA1]
gi|325487976|gb|EGC90413.1| putative heme d1 biosynthesis radical SAM protein NirJ2
[Eggerthella sp. HGA1]
Length = 334
Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 47/215 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS ++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
+ +++ + LR P+ I PE+ LKEAG
Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108
Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
+ H H Y+ + I A AG+ Q L + D + + + +
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
VE+ +Y+ F + + G+ I
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186
>gi|294793531|ref|ZP_06758668.1| radical SAM domain protein [Veillonella sp. 3_1_44]
gi|294455101|gb|EFG23473.1| radical SAM domain protein [Veillonella sp. 3_1_44]
Length = 394
Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
CP C FC + + G + L+ + + + Y+ + + WEV F GG
Sbjct: 5 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63
Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
K LQ +L + + +R +R P + E I L+ G K V +
Sbjct: 64 TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118
Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ + H + E + A++RL + + + Q LL G
Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160
>gi|118602407|ref|YP_903622.1| radical SAM protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|205829871|sp|A1AW44|RLMN_RUTMC RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|118567346|gb|ABL02151.1| 23S rRNA m(2)A-2503 methyltransferase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 356
Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 37/186 (19%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI-QEKSQIWEVIFTG-GDPLILS- 158
C + C FC M G K + A Y+ + +I V+F G G+PL+
Sbjct: 111 GCGLACTFCS-TGMQGFNKNLTTAEIIAQVLIASRYLNSKTKRISNVVFMGMGEPLLNEH 169
Query: 159 ------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
L + L + + + + P +++ + + +++H
Sbjct: 170 AVYNACDLLLDDLAFGLSR----RKVTISTSGVV-------PAMLRMSERTPVSLAVSLH 218
Query: 213 AN--HPY-EFSE--------EAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLM 258
A+ H E E + A AG +L + V+LKG+ND E L+
Sbjct: 219 ASDDHLRNELVPINQKYSLEELLKACKVYLQAGTQKRHILFEYVMLKGVNDSIEHANKLV 278
Query: 259 RTFVEL 264
+ +
Sbjct: 279 KLLKGI 284
>gi|54024605|ref|YP_118847.1| hypothetical protein nfa26360 [Nocardia farcinica IFM 10152]
gi|54016113|dbj|BAD57483.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 526
Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 27/204 (13%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
P K L P DP+ L + ++ +L +L C + C CF +
Sbjct: 87 PTKAHLPDTPG-NFDPVPAAYLRGLPEMQTQHTCILLADILAGCNLRCPTCF--ADSTPE 143
Query: 122 KGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
V++ D A + +E ++ ++ +GG+P + L +L L + +
Sbjct: 144 LAGVVAVADVLANVDQRLAREHGRLDVLMLSGGEPTLHPD--LPTLLAELTARP-ITRIL 200
Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAIAAI 227
++ R+ + L+ L E + V + + + H + A+
Sbjct: 201 INTNGV-----RLARDESLVALLAEHRERVEVYLQYDGVSAAASRHHRGGDLRALKAEAL 255
Query: 228 SRLANAGI-ILLSQSVLLKGINDD 250
RL+ GI L +V L G+NDD
Sbjct: 256 RRLSGHGIFTTLVMTVAL-GVNDD 278
>gi|6685644|sp|O27593|MOAA_METTH RecName: Full=Probable molybdenum cofactor biosynthesis protein A
Length = 305
Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C V C +C R M S+ LS+ D E + + ++ +GG+PLI
Sbjct: 16 LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ ++++ + I + + + + L EAG + + +
Sbjct: 73 D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 119
Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
+ E I+R +GI + V+L+G+N
Sbjct: 120 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 163
>gi|295106858|emb|CBL04401.1| Predicted Fe-S oxidoreductases [Gordonibacter pamelaeae 7-10-1-b]
Length = 335
Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 74/215 (34%), Gaps = 47/215 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS+ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EASALELSTDEGRKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
+ +++ + LR P+ I PE LKEAG
Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEAAARLKEAGACAMGISVDS 108
Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
+ A H H Y+ + I A AG+ Q L + D + + + +
Sbjct: 109 LDAAKHDKFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
VE+ +Y+ F + + G+ I
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186
>gi|262196535|ref|YP_003267744.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum
DSM 14365]
gi|262079882|gb|ACY15851.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum
DSM 14365]
Length = 346
Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 77/212 (36%), Gaps = 21/212 (9%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C C +C MV + +LS ++ E + + + TGG+P +
Sbjct: 25 VSLTDRCNFRCTYCMPATGMVFRARKELLSFEELERLIGVFAS-VGVRRIRLTGGEP-TV 82
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
+ + ++ + + + V + + PEL Q L EAG V I++ P
Sbjct: 83 RAEVVS-LVGRIARVPGID------EVVMTSNGHLFPELAQPLAEAGLAGVNISLDTLDP 135
Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
F A I AG+ + +V LKG ND + L I P
Sbjct: 136 ERFRALTRRGDLARVLAGIDAARAAGLEVKINAVALKGEND--AEVPALCAYAWGRGITP 193
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
++ H ++ G + +I A++
Sbjct: 194 RFIEHMPMSEGQLYSETRQLTAAEIRAAVSAH 225
>gi|154500609|ref|ZP_02038647.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
29799]
gi|150270498|gb|EDM97807.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
29799]
Length = 253
Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 25/193 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + CP+ C +C + G++ GT ++ + AA + + + TGG+
Sbjct: 21 PGIRFVVFFQGCPMRCLYCHNPDTWGTEGGTEMTVDELLAAYQRNKGFYRQGGITATGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPVYI 209
PL L L ++ + H + + P E +
Sbjct: 81 PL-LQLPFLTELFTAAKEQG------IHTCLDTSGIVYRPDHRQGEFDALFAVTDLVLLD 133
Query: 210 AIHAN---HPYEFSEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANL----- 257
HA+ H + + + +A L A + ++ + V++ G+ D P+ L L
Sbjct: 134 IKHADPQGH-RQLTGQDQSPVLAFARALEQAKVPIIVRHVVVPGLTDSPQELTALGRLIA 192
Query: 258 -MRTFVELRIKPY 269
R L + PY
Sbjct: 193 PFRNLKGLEVLPY 205
>gi|299148082|ref|ZP_07041145.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_23]
gi|298514265|gb|EFI38151.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 3_1_23]
Length = 152
Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E G L+ + ++ + I+ + V F+GGDP + L
Sbjct: 25 GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83
>gi|227504771|ref|ZP_03934820.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940]
gi|227198621|gb|EEI78669.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940]
Length = 394
Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 24/120 (20%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
P + ++ C + C+ C R + L+++ +A L I + V+ TG
Sbjct: 17 KPFIAIWEVTRACQLVCQHC-RADAQHEPAPGQLTTEQGKALLDSIASYDKPRPIVVLTG 75
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDPQRINPELIQCLKEAG 204
GDP L+++ + + + + P V P R+ E ++ L+ AG
Sbjct: 76 GDPFERGD--LEELTE------------YGTSLGLNVSLSPSVTP-RLTRERLEGLRAAG 120
>gi|313159153|gb|EFR58528.1| menaquinone biosynthesis protein, SCO4494 family [Alistipes sp.
HGB5]
Length = 360
Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++ + C CRFC R GS + + ++ E +A ++ I EV GG +
Sbjct: 58 IEPTNRCVFNCRFCSYRRPAGSPEAWDYTMEEIEQ-IARGRQGKGITEVHIVGG---VHP 113
Query: 159 HKRLQKVLKTLRYIKHV 175
L+ + +R +K +
Sbjct: 114 DHGLEYYIDMIRRVKAI 130
>gi|303232268|ref|ZP_07318967.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
gi|302481678|gb|EFL44739.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
Length = 449
Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R +K+ C C FC + G S D + ++ ++ EV+ TG
Sbjct: 162 RTRPGIKVQDGCNNRCSFCIVWKARGP-----ACSADVDEIISQVRATQAHGAHEVVLTG 216
Query: 152 ---GDP---LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GD S RL +L + ++ +R S ++P I EL+ + +
Sbjct: 217 INLGDYRYEYKGSRLRLPGLLSEIMKQTSIERIRLSS----IEPPDITDELLDVIAGSEG 272
Query: 206 PVYIAIHA 213
+ +H
Sbjct: 273 RIAQFLHI 280
>gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
Length = 365
Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 48/224 (21%)
Query: 104 VCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
CP+ C FC F+R + + + ++ +++ I V+F G G+PL+
Sbjct: 134 GCPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVGHD-------INNVVFMGMGEPLL 186
Query: 157 LSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
++ L+ V+ + + PE I+ L + G +Y+ +
Sbjct: 187 NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI--------PEGIRRLADEGLDIYLCLSL 238
Query: 214 NHPY-EFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANL-- 257
+ P E +A+ G+ L + V+LK +ND P+ L
Sbjct: 239 HAPNNELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELAT 298
Query: 258 --MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
V + + PY + AGT R + + LK
Sbjct: 299 LFSNLQVYVNLIPY-----NPVAGTQFARPSASRIAPFMKILKG 337
>gi|311067283|ref|YP_003972206.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus atrophaeus 1942]
gi|310867800|gb|ADP31275.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
[Bacillus atrophaeus 1942]
Length = 372
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L ++E + + TGG+P +
Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLQRLEEIPLLRSISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L ++ P +H +
Sbjct: 89 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIERYEWIIPYLDVLHIS 138
Query: 215 H 215
H
Sbjct: 139 H 139
>gi|303239253|ref|ZP_07325782.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
gi|302593298|gb|EFL63017.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
Length = 434
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 40/164 (24%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++ ++ C C FCF ++ + ++ D ++ L+++Q V T
Sbjct: 77 EKEIMDEARSCRNNCLFCFIDQLPKGMRKSLYFKDD-DSRLSFLQGN----FVTLT---- 127
Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIH 212
++ + + ++++ + I + H+ +P RI + LK
Sbjct: 128 -NMTDEDIDRIIRYRICPI----NISVHT----TNPDLRI-----KMLK----------- 162
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
F+ + + +LA AGI++ Q VL G N+ E++
Sbjct: 163 ----NRFAGDVYTRLQKLAAAGIMMNCQIVLCPGYNNGEELIKT 202
>gi|239623740|ref|ZP_04666771.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521771|gb|EEQ61637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 492
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
K ++ I E D I + P++ +YP + + ++ C +C +C + G ++
Sbjct: 170 HKHKMVIDVWEDTDQIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 224
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLRYI 172
++ + + + EV+ G + P+ +L+ + +
Sbjct: 225 SR--KPEEIIKEIRRLASD-GVVEVMLLGQNVNSYGKNLETPMTF-----AGLLREVEKV 276
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ +RF + P+ ++ ELI+ + +GK + +H
Sbjct: 277 DGIRRIRFMTSH----PKDLSDELIEVMAGSGK-ICRHLH 311
>gi|149199462|ref|ZP_01876497.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
gi|149137397|gb|EDM25815.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
Length = 437
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 13/124 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C C FC + S+D E L + E++ TG
Sbjct: 148 KTRANLKIQDGCDFMCTFC-----IIPMARGRSRSRDMENLLEEARTLIGQGFREIVITG 202
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ + V+ L ++ ++ +R S P P++I + + +
Sbjct: 203 VNVATYDSQGRTFLDVIDRLNELEGIERIRISSIEPTTIPEKI----FDYMADPNHALVP 258
Query: 210 AIHA 213
+H
Sbjct: 259 YLHI 262
>gi|310659190|ref|YP_003936911.1| hypothetical protein CLOST_1886 [Clostridium sticklandii DSM 519]
gi|308825968|emb|CBH22006.1| conserved protein of unknown function [Clostridium sticklandii]
Length = 445
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 58/185 (31%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
++ + C C FCF ++ + T+ D ++ L+++Q + T +
Sbjct: 87 IIDSVKTCRNKCIFCFIDQLPEGMRETLYFKDD-DSRLSFLQGN----FITMT-----NM 136
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
K + K++K RI+ PV +++H +P
Sbjct: 137 GDKEIDKMIK----------------------YRIS------------PVNVSVHTTNPT 162
Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
F+ + + + RL +A I + +Q VL+ +ND E+ LA+L
Sbjct: 163 LRAKMLGNRFAGDVLDKMKRLKSADITMNAQIVLVPDVNDKEELDKTINDLASLYPQLNS 222
Query: 264 LRIKP 268
+ I P
Sbjct: 223 VAIVP 227
>gi|134277196|ref|ZP_01763911.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 305]
gi|134250846|gb|EBA50925.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 305]
Length = 377
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
P++R+ IP +L+ P + D PL+ + + + C C
Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58
Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
+C R + G +L+ ++ E + ++ TGG+PL+ K L+
Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115
Query: 165 VLKTLRYIKHV 175
+++ L + V
Sbjct: 116 LIERLANMTTV 126
>gi|126454258|ref|YP_001067111.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106a]
gi|217420454|ref|ZP_03451959.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 576]
gi|226197916|ref|ZP_03793490.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pakistan 9]
gi|254259569|ref|ZP_04950623.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710a]
gi|126227900|gb|ABN91440.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106a]
gi|217395866|gb|EEC35883.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 576]
gi|225930104|gb|EEH26117.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pakistan 9]
gi|254218258|gb|EET07642.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1710a]
Length = 377
Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
P++R+ IP +L+ P + D PL+ + + + C C
Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58
Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
+C R + G +L+ ++ E + ++ TGG+PL+ K L+
Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115
Query: 165 VLKTLRYIKHV 175
+++ L + V
Sbjct: 116 LIERLANMTTV 126
>gi|313114194|ref|ZP_07799746.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623603|gb|EFQ07006.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 487
Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 166
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ K+L + I H + RF + I+ ++I + V +++
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220
>gi|295100532|emb|CBK98077.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Faecalibacterium
prausnitzii L2-6]
Length = 483
Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 103 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 162
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ K+L + I H + RF + I+ ++I + V +++
Sbjct: 163 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 216
>gi|291459649|ref|ZP_06599039.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417681|gb|EFE91400.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 432
Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ + + + C + C CF G + L ++ A + I+E + + +++ +GG+PL
Sbjct: 108 KVHITMTNNCNMRCPHCFVSA--GIVEKQELKVEEILAVVERIKEINGLTDIVVSGGEPL 165
Query: 156 ILS 158
I S
Sbjct: 166 IHS 168
>gi|239623774|ref|ZP_04666805.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521805|gb|EEQ61671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 448
Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 24/192 (12%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
I +Q + K ++ + D + Y LK+ C C +C
Sbjct: 111 IVKQVLEGKGITHLTSFHDLGELPDTQAGRVVTTGGYY---AFLKIAEGCDKRCTYCIIP 167
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRY 171
+ G + + + + ++ L K L K+L L
Sbjct: 168 YLRGPYR--SVPMEQLLEEARQLASGGVKELILVAQETTLYGKDIYGGKSLPKLLHELAQ 225
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP-YEF---------S 220
I +Q +R P+ I ELI+ ++ K Y+ I H
Sbjct: 226 IPGIQWIRIQ----YCYPEEITDELIEAIRSEEKVCHYLDIPIQHASNRILKRMGRRTNR 281
Query: 221 EEAIAAISRLAN 232
EE I++L
Sbjct: 282 EELTERIAKLRK 293
>gi|331649321|ref|ZP_08350407.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli M605]
gi|331041819|gb|EGI13963.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli M605]
Length = 445
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + +R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RNRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|301060145|ref|ZP_07201012.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300445657|gb|EFK09555.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 295
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 97 ILLKLLHVCPVY-CRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
ILL++ C C FC + T+LS D A Y++ + +I G
Sbjct: 21 ILLQVTLGCSHNKCTFCGTYTDKRFTIKDDKTILS--DILFASKYMKRQDRI---FLMDG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHV-QILRFH 181
D LI+ KRL +L +R +H+ I R
Sbjct: 76 DALIIPQKRLMWILDRIR--EHLPWIKRVG 103
>gi|237813219|ref|YP_002897670.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei MSHR346]
gi|237506155|gb|ACQ98473.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei MSHR346]
Length = 377
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
P++R+ IP +L+ P + D PL+ + + + C C
Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58
Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
+C R + G +L+ ++ E + ++ TGG+PL+ K L+
Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115
Query: 165 VLKTLRYIKHV 175
+++ L + V
Sbjct: 116 LIERLANMTTV 126
>gi|255691222|ref|ZP_05414897.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides finegoldii DSM 17565]
gi|260623136|gb|EEX46007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides finegoldii DSM 17565]
Length = 163
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E + G L+ + ++ + I+ + V F+GGDP L
Sbjct: 35 GCSHHCPGCHNPESWNPEAGERLTEEKIQSIIKEIKANPLLDGVTFSGGDPFYNPEAFL 93
>gi|254521757|ref|ZP_05133812.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
SKA14]
gi|219719348|gb|EED37873.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
SKA14]
Length = 326
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 13/175 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L C C +C + L + + + ++ TGG+P +
Sbjct: 17 LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
L +++ T+ + ++ + + +P P R + ++ +
Sbjct: 76 D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133
Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
H E ++ G+ + +VLL+G+NDD P+ + L +R
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186
>gi|91203561|emb|CAJ71214.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 331
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 32/187 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R+P ++L++ H+C + C C R + T+ + I E V TG
Sbjct: 25 RFPLVLMLEVTHLCNLACEGCGR---ILEYHDTMREMLSVGECMQAIHECPTP-VVTITG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYI 209
G+PL+ + K++ + IK + + + + L+ LK+ K + I
Sbjct: 81 GEPLMHP--EIDKIISGI--IKEKRHVYLCTNGIL---------LVDALKKLKPHKYLNI 127
Query: 210 AIHANHPYE---------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-ILANLMR 259
+H + E + A AI AG + + + + K D E + L
Sbjct: 128 NVHIDGLAETHDKIAGKGIFDRATNAIREAKKAGFKVCTNTTIFK---DTSEKEIVELFS 184
Query: 260 TFVELRI 266
L +
Sbjct: 185 FLQGLGV 191
>gi|134299022|ref|YP_001112518.1| hypothetical protein Dred_1159 [Desulfotomaculum reducens MI-1]
gi|134051722|gb|ABO49693.1| protein of unknown function DUF512 [Desulfotomaculum reducens MI-1]
Length = 439
Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 60/185 (32%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C FCF +M S + ++ YI++
Sbjct: 84 FGPIRRCHNRCLFCFVDQMAPSMRESL-----------YIKDD----------------- 115
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
RL + +V+ + EL + + + P+YI++H + E
Sbjct: 116 DYRLSFWQGNFVSLTNVK----------------DEELKRIIDQKLGPLYISVHTTNS-E 158
Query: 219 F---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
+ + + + LA AGI + +Q VL GIND E+ LA L
Sbjct: 159 LRCRMLNNRHAGKILEQLKMLAEAGIEMQTQVVLCPGINDGEELKRTIRDLALLWPQVHS 218
Query: 264 LRIKP 268
L + P
Sbjct: 219 LAVVP 223
>gi|167947811|ref|ZP_02534885.1| hypothetical protein Epers_15217 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 213
Score = 42.8 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 26/168 (15%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
Q + ++ +LNI+P+ + + G++ R R +K+ C C FC V
Sbjct: 45 QIVQRELDLNIMPQ----SVTEEESG---GLLARGRQRAFIKVQDGCRYRCTFCI----V 93
Query: 119 GSQKGTVLSSKDTEAALAYI-QEKSQ-IWEVIFTG---GDPLILSHKRLQKVLKTLRYIK 173
+G S E +A I + S+ I EV+ TG G L +++ +
Sbjct: 94 TLARGEERSRPADEEVIAEINRLHSEGIQEVVLTGVHLGGYGSDIDSDLGQLIDRVLADS 153
Query: 174 HVQILRFHSRVPIVDPQ---------RINPELIQCLKEAGKPVYIAIH 212
+ LR S P P R P L L + + + IA H
Sbjct: 154 EIPRLRVGSLEPWDLPDNFWSRFDNPRFMPHLHLPL-QRRQRLCIATH 200
>gi|320449128|ref|YP_004201224.1| radical SAM domain-containing protein [Thermus scotoductus SA-01]
gi|320149297|gb|ADW20675.1| radical SAM domain protein [Thermus scotoductus SA-01]
Length = 356
Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+HR+P + ++ C + C+ C R V L++++ L + + ++
Sbjct: 5 LHRFPLLVAWEMTRACLLACQHC-RASAVPDPLPGELTTEEGLRLLEELATYTPKPILLP 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAG-K 205
TGGDPL L +L+ + R +V P V P R+ E+++ KE
Sbjct: 64 TGGDPLARPDLFL--LLEEAK--------RLGLKVGITPAVTP-RLTREVVERFKELSVH 112
Query: 206 PVYIAI 211
+ I++
Sbjct: 113 QMAISL 118
>gi|167570715|ref|ZP_02363589.1| molybdenum cofactor biosynthesis protein A [Burkholderia
oklahomensis C6786]
Length = 363
Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 34 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92
Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199
PL+ K ++ +++ L + V + + +V R+ L
Sbjct: 93 PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 150
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258
K + N S + + I AG + V+ +G ND + +
Sbjct: 151 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 202
Query: 259 RTFVELRIK 267
R F +
Sbjct: 203 RRFKGTGVV 211
>gi|53720059|ref|YP_109045.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei K96243]
gi|53725728|ref|YP_102316.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 23344]
gi|254199210|ref|ZP_04905576.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
FMH]
gi|254205515|ref|ZP_04911867.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
JHU]
gi|254296849|ref|ZP_04964302.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 406e]
gi|52210473|emb|CAH36456.1| putative molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei K96243]
gi|52429151|gb|AAU49744.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 23344]
gi|147748806|gb|EDK55880.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
FMH]
gi|147752958|gb|EDK60023.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
JHU]
gi|157807170|gb|EDO84340.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 406e]
Length = 360
Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 31 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 89
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K L+ +++ L + V
Sbjct: 90 PLL--RKNLEFLIERLANMTTV 109
>gi|282856153|ref|ZP_06265436.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
W5455]
gi|282585912|gb|EFB91197.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
W5455]
Length = 435
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 21/138 (15%)
Query: 61 IPQKEELNILPEER-----EDP--IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
+P E + +E+ +DP + + +P + ++P + + + H C +C +C
Sbjct: 108 VPDALETAMSGDEKIVLLDDDPRELHELRFAP---LERQFPWKASVMISHGCDNFCTYCI 164
Query: 114 ----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
R ++S + E + I Q V G D L +L
Sbjct: 165 VPYVRGRFASRSPREIMSEAEQLVEGGVKEICLLGQ--NVDTYGKD---LDRYSFADLLN 219
Query: 168 TLRYIKHVQILRFHSRVP 185
+ +IK ++ LRF + P
Sbjct: 220 DVAHIKGLERLRFMTSYP 237
>gi|228960999|ref|ZP_04122629.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798716|gb|EEM45699.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 339
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|228955004|ref|ZP_04117021.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229072231|ref|ZP_04205438.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
gi|229081982|ref|ZP_04214473.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228701359|gb|EEL53854.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228710888|gb|EEL62856.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
gi|228804731|gb|EEM51333.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 339
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229193012|ref|ZP_04319968.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10876]
gi|228590459|gb|EEK48322.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
10876]
Length = 339
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|168181641|ref|ZP_02616305.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|237796408|ref|YP_002863960.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
str. 657]
gi|182675137|gb|EDT87098.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|229261767|gb|ACQ52800.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
str. 657]
Length = 432
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
+ Y D R LK+ C +C +C ++ +G V S K + + +
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189
Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+I +G D L +L+ + ++ ++ +R S +DP E I +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIGI 245
Query: 201 KEAGKPVYIAIHA 213
+ + H
Sbjct: 246 SKLKR---FCPHF 255
>gi|206969465|ref|ZP_03230419.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
gi|206735153|gb|EDZ52321.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
Length = 334
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 15 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 74 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 125
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 126 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 172
>gi|160944519|ref|ZP_02091747.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
M21/2]
gi|158444301|gb|EDP21305.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
M21/2]
Length = 325
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 17/168 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + +C + CR+C + ++ VL+ ++ A + I V TGG+PL+
Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
K + +++ L+ ++ + + + +L L V I++ P
Sbjct: 71 RKNVAQLVAGLKATPGIRRVTLTTNA-----MLLAEQLSALLDAGLDSVNISLDTLRPEV 125
Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANL 257
+ + A + +G+ + V G+N+ E LA L
Sbjct: 126 FRQITARDDFAAVQAGLQAALESGLPVKLNCVPQAGVNEGELETLAAL 173
>gi|148265592|ref|YP_001232298.1| molybdenum cofactor biosynthesis protein A [Geobacter
uraniireducens Rf4]
gi|146399092|gb|ABQ27725.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4]
Length = 325
Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C + + + S + +A S I ++ TGG+PL+
Sbjct: 16 LSVTDRCNMRCVYCMPADGIPLLTHNDILSYEELLLVAKTAVASGIEKIRVTGGEPLV-- 73
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
K + L L I ++ L + E+ + L++AG + I++ + P
Sbjct: 74 RKGIVPFLTRLAAIPGLRQLVLTTNGL------YLAEMAESLRQAGVQRLNISLDSLQPE 127
Query: 218 EFSEEAIAA--------ISRLANAGIILLSQSVLLKGIND 249
F+ A I+ AG L V+++G+ND
Sbjct: 128 TFAGITRGADLHRVMAGIAAAEQAGFPLKINVVVMRGVND 167
>gi|310821937|ref|YP_003954295.1| molybdenum cofactor biosynthesis protein moaa [Stigmatella
aurantiaca DW4/3-1]
gi|309395009|gb|ADO72468.1| Molybdenum cofactor biosynthesis protein MoaA [Stigmatella
aurantiaca DW4/3-1]
Length = 335
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 45/223 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C K +LS+ + E ++ I V TGG+PLI
Sbjct: 28 LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 84
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ ++ + L + V+ + + N ++ L N
Sbjct: 85 D--ILEIAQRLSALPGVERVAITT----------NASHLERLA-VPLREAGVSQLN--IS 129
Query: 219 FSEEAIAAISRLANAG-----------------IILLSQSVLLKGINDDPEILANLMRTF 261
+ R++ G L V+++G+ND A L+
Sbjct: 130 LDTLSAETFRRISKQGDFASTLRGIDAAAAAGFASLKLNVVVMRGVNDGEA--AALVEYA 187
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
+ P + G + +++ L+ SGL
Sbjct: 188 HARGLTP--RFIELMPFGQGE---PVPTA-ELIERLQA--SGL 222
>gi|121598421|ref|YP_993796.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
SAVP1]
gi|124385812|ref|YP_001028740.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10229]
gi|126451180|ref|YP_001081354.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10247]
gi|242314341|ref|ZP_04813357.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106b]
gi|251767263|ref|ZP_02266560.2| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
PRL-20]
gi|254178129|ref|ZP_04884784.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 10399]
gi|254357683|ref|ZP_04973956.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
2002721280]
gi|121227231|gb|ABM49749.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
SAVP1]
gi|124293832|gb|ABN03101.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10229]
gi|126244050|gb|ABO07143.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
NCTC 10247]
gi|148026810|gb|EDK84831.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
2002721280]
gi|160699168|gb|EDP89138.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
ATCC 10399]
gi|242137580|gb|EES23982.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 1106b]
gi|243063305|gb|EES45491.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
PRL-20]
Length = 363
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 34 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K L+ +++ L + V
Sbjct: 93 PLL--RKNLEFLIERLANMTTV 112
>gi|298377685|ref|ZP_06987636.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
gi|298265388|gb|EFI07050.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
Length = 444
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A + E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I K
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|295697132|ref|YP_003590370.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
gi|295412734|gb|ADG07226.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
Length = 394
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ ++ C ++C C + LS+++ L + E + V+ TGGDP
Sbjct: 29 VIWEVTRACSLHCLHCRADAQF-RRDPRELSTEEGFRLLDELAEWK-VPLVVLTGGDPFE 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ L + LR S P P R+ E ++ LKEAG
Sbjct: 87 RPD------VFDLVRYGAERGLRM-SVTPSATP-RVTREALERLKEAG 126
>gi|255016549|ref|ZP_05288675.1| putative Fe-S oxidoreductase [Bacteroides sp. 2_1_7]
Length = 444
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A + E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I K
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|150006722|ref|YP_001301465.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
gi|149935146|gb|ABR41843.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
Length = 444
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A + E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L + + R S ++P I E I K
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|152974241|ref|YP_001373758.1| YfkB-like domain-containing protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152022993|gb|ABS20763.1| YfkB-like domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 375
Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L E L + E + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPM---ELLLKRLDEVPHLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S K + + L H + +R +IN L L + P +H +
Sbjct: 90 MSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|323486989|ref|ZP_08092303.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
WAL-14163]
gi|323692033|ref|ZP_08106281.1| MiaB family RNA modification enzyme [Clostridium symbiosum
WAL-14673]
gi|323399701|gb|EGA92085.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
WAL-14163]
gi|323503956|gb|EGB19770.1| MiaB family RNA modification enzyme [Clostridium symbiosum
WAL-14673]
Length = 445
Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 27/154 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152
LK+ C C +C + G + + TEA Q ++ E G
Sbjct: 146 AFLKISEGCNKRCTYCIIPSLRGPYRSVPMERLLTEAGQLAGQGVKELILVAQETTLYGT 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D + K L ++L+ L I ++ LR P+ I EL+Q +KE K Y+ I
Sbjct: 206 D--LYGKKMLPELLRRLAEIPGIEWLRVQ----YCYPEEITEELVQVIKEEEKVCHYLDI 259
Query: 212 HANHP-------------YEFSEEAIAAISRLAN 232
H E E I+RL
Sbjct: 260 PIQHASDRILKSMGRKTSRE---ELKERIARLRE 290
>gi|222475965|ref|YP_002564486.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
gi|222454336|gb|ACM58600.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 258
Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ C + C FC G + +D ++ + + Q V+ TGG+PLI
Sbjct: 42 VFVRTSGCNLRCWFCDSYHTSWEPTG---AWRDVDSIIEEVHSHEQANHVVLTGGEPLIH 98
Query: 158 SHKRLQKVLKTLRY 171
++L+ L
Sbjct: 99 EESI--ELLERLAA 110
>gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 453
Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 65 EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+E+ L EE ED + HS + Y I L ++H C + C++CF E
Sbjct: 63 DEIQELAEEGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
G V+S+ + A+ Y+ ++S E+ GG+P L +++++K R
Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDTIKEIIKYARD 173
>gi|268326277|emb|CBH39865.1| conserved hypothetical protein, radical SAM superfamily [uncultured
archaeon]
Length = 395
Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ ++ C + C C G + L+ ++ A + I I +FTGG+PL
Sbjct: 77 VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132
Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L ++ + I V I + I E+ + L++ V I
Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177
>gi|268325167|emb|CBH38755.1| conserved hypothetical protein, radical SAM superfamily [uncultured
archaeon]
Length = 395
Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++ ++ C + C C G + L+ ++ A + I I +FTGG+PL
Sbjct: 77 VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132
Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L ++ + I V I + I E+ + L++ V I
Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177
>gi|184155556|ref|YP_001843896.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
IFO 3956]
gi|260662959|ref|ZP_05863852.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
28-3-CHN]
gi|226704822|sp|B2GCN4|MOAA_LACF3 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|183226900|dbj|BAG27416.1| molybdopterin precursor synthase MoaA [Lactobacillus fermentum IFO
3956]
gi|260552580|gb|EEX25580.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
28-3-CHN]
Length = 332
Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + + +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98
>gi|160883454|ref|ZP_02064457.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
gi|237720232|ref|ZP_04550713.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_2_4]
gi|293371156|ref|ZP_06617693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CMC 3f]
gi|156111174|gb|EDO12919.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
gi|229450784|gb|EEO56575.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_2_4]
gi|292633814|gb|EFF52366.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CMC 3f]
Length = 152
Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E + G L+ + ++ + I+ + V F+GGDP + L
Sbjct: 25 GCSHHCPGCHNPESWNPRAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83
>gi|15679546|ref|NP_276663.1| molybdenum cofactor biosynthesis protein A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622671|gb|AAB86024.1| molybdenum cofactor biosynthesis MoaA [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 316
Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C V C +C R M S+ LS+ D E + + ++ +GG+PLI
Sbjct: 27 LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 83
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ ++++ + I + + + + L EAG + + +
Sbjct: 84 D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 130
Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
+ E I+R +GI + V+L+G+N
Sbjct: 131 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 174
>gi|227514963|ref|ZP_03945012.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum ATCC 14931]
gi|227086662|gb|EEI21974.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
fermentum ATCC 14931]
Length = 332
Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C +E + VLS + + + + +V T
Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GG+PL+ + +++ ++ I ++ + +
Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98
>gi|126441374|ref|YP_001059824.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 668]
gi|126220867|gb|ABN84373.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 668]
Length = 377
Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
P++R+ IP +L+ P + D PL+ + + + C C
Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58
Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
+C R + G +L+ ++ E + ++ TGG+PL+ K L+
Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115
Query: 165 VLKTLRYIKHV 175
+++ L + V
Sbjct: 116 LIERLANMTTV 126
>gi|150018843|ref|YP_001311097.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905308|gb|ABR36141.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 288
Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
+ +++++ C C FC M S+K T+ S +D +A + Y +E S + ++ G
Sbjct: 14 NSLIIQVTLGCSHNKCNFC---NMYKSKKFTIKSLEDIKADVNYFREMYSYVEKIFLADG 70
Query: 153 DPLILSHKRLQKVLKTLR 170
D LI+ ++L+++L +R
Sbjct: 71 DALIIPTEKLKEILTLIR 88
>gi|46447397|ref|YP_008762.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46401038|emb|CAF24487.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 434
Score = 42.4 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
Query: 60 FIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
IP +E E + ++ + + + + R +K+ C +C +C V
Sbjct: 100 VIPNREKEQLLARLFPKENLPEFSITQFDS-----HTRAFIKVQDGCNSFCTYCII-PYV 153
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG-----DPLILS---HKRLQKVLKTLR 170
+ + + E A A I E++ TG D + RL ++++ +
Sbjct: 154 RGRSRSRSVEEVLEEAKALISN--GYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVD 211
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ ++ LR S +DP ++ EL + GK ++H
Sbjct: 212 QLPGLERLRLSS----IDPDEVDDELSDAILN-GKHTCHSMHI 249
>gi|313904016|ref|ZP_07837396.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
gi|313471165|gb|EFR66487.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
Length = 453
Score = 42.4 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
LK+ C +C +C +M G + + +D + ++ E G
Sbjct: 148 LKIAEGCDRHCTYCAIPDMRGPYR--SVPMEDLLEEARGLAADGVKELILVAQETTLYGT 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D + + KRL +LK L I+ + +R V P+ I PELIQ +KE K Y+ I
Sbjct: 206 D--LYNEKRLHILLKELCKIEDIHWIR----VLYCYPEEIYPELIQTMKEEPKICHYMDI 259
Query: 212 HANHPY 217
H
Sbjct: 260 PIQHAN 265
>gi|285017403|ref|YP_003375114.1| molybdenum cofactor biosynthesis protein a [Xanthomonas albilineans
GPE PC73]
gi|283472621|emb|CBA15126.1| probable molybdenum cofactor biosynthesis protein a [Xanthomonas
albilineans]
Length = 344
Score = 42.4 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 28/176 (15%)
Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIW 145
R L L ++ C C +C + V G LS E +
Sbjct: 18 RGRALHDLRLSVIEACNFRCGYCMPADKVPDDYGFDAAGRLSFAQIETLARAFVRN-GVR 76
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ TGG+PL+ + L ++++ L I V+ L + + Q L++AG
Sbjct: 77 KLRLTGGEPLL--RRELPELVRRLARIAGVEDLAMTTNGV------LLATHAQALRDAGL 128
Query: 206 P-VYIAIHANHP---YEFS------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
V +++ A P + S + +A I AG+ + V+ +G+NDD
Sbjct: 129 QRVTVSLDAIDPLLFRQLSGGRGEIAQVLAGIDAAVAAGLGPVKLNCVVQRGVNDD 184
>gi|326796263|ref|YP_004314083.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Marinomonas mediterranea MMB-1]
gi|326547027|gb|ADZ92247.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Marinomonas mediterranea MMB-1]
Length = 450
Score = 42.4 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 19/125 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
+ ++ C YC FC V S+ E L + + S+ + E+ G +
Sbjct: 148 AFVSVMEGCSKYCTFC-----VVPYTRGEEVSRPYEDVLKEVAQLSEQGVREIHLLGQNV 202
Query: 155 LILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ L ++ + I+ V+ +RF + P+ LI+ + K +
Sbjct: 203 NAYRGETQDGDEADLADIIHAIARIEGVERIRFTTSHPV----EFTDSLIEAFRTEPK-L 257
Query: 208 YIAIH 212
+H
Sbjct: 258 VSHLH 262
>gi|52081091|ref|YP_079882.1| hypothetical protein BL02101 [Bacillus licheniformis ATCC 14580]
gi|52786470|ref|YP_092299.1| YqeV [Bacillus licheniformis ATCC 14580]
gi|319644951|ref|ZP_07999184.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
gi|52004302|gb|AAU24244.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
gi|52348972|gb|AAU41606.1| YqeV [Bacillus licheniformis ATCC 14580]
gi|317392760|gb|EFV73554.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
Length = 451
Score = 42.4 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIRQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + ++LK L +K ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAQLLKELDSRVKGLKRIRISS----IEASQITDEVIEVLDRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|254302542|ref|ZP_04969900.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148322734|gb|EDK87984.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 348
Score = 42.4 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKE 202
F GG LQK + L +KH V+ +R +R P+ I+ E++ LK+
Sbjct: 60 FFGG-TFTGISMNLQK--EYLEVVKHYIDNNDVEGVRISTR-----PECIDDEILTQLKK 111
Query: 203 AGKPVY 208
G
Sbjct: 112 YGVKTI 117
>gi|108801200|ref|YP_641397.1| radical SAM family protein [Mycobacterium sp. MCS]
gi|119870351|ref|YP_940303.1| radical SAM domain-containing protein [Mycobacterium sp. KMS]
gi|126437180|ref|YP_001072871.1| radical SAM domain-containing protein [Mycobacterium sp. JLS]
gi|108771619|gb|ABG10341.1| Radical SAM [Mycobacterium sp. MCS]
gi|119696440|gb|ABL93513.1| Radical SAM domain protein [Mycobacterium sp. KMS]
gi|126236980|gb|ABO00381.1| Radical SAM domain protein [Mycobacterium sp. JLS]
Length = 514
Score = 42.4 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 42/198 (21%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKD 130
DPI L + ++ +L + C + C CF V + +
Sbjct: 90 DPIPQAYLRGLPEMQTQHTCILLQDISDTCNLRCPTCFTESSPDLRNVVPVAEVLANVDQ 149
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL------RFHSRV 184
+E ++ V+ +GG+P + RL ++L L +IL R +
Sbjct: 150 RLR-----RENGRLDVVMLSGGEPTLHP--RLAELLTELVDRPITRILVNTNGVRIAT-- 200
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----------FSEEAIAAISRLANAG 234
+ L+ L + V + + + E AA+ RL+
Sbjct: 201 --------DDALLDLLTAHRERVEVYLQYDGLSEAAHRHHRGGDLRRIKRAALQRLSERE 252
Query: 235 I--ILLSQSVLLKGINDD 250
I L+ + L G+NDD
Sbjct: 253 IFTTLVMTTAL--GVNDD 268
>gi|46581406|ref|YP_012214.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450828|gb|AAS97474.1| radical SAM domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235063|gb|ADP87917.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
Length = 370
Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149
+P R+ L+L + C C C R G D + AL I + +F
Sbjct: 86 FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 142
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G+PL+ R+ ++L L + S+ + P + L + +
Sbjct: 143 HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 200
Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
A + + RLA+ L Q L+ + + E+
Sbjct: 201 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 253
>gi|20094510|ref|NP_614357.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
gi|19887619|gb|AAM02287.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
Length = 499
Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 38/174 (21%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPL 155
++ + + C + C CF S + E L ++ + + V F GG+PL
Sbjct: 96 IIDVTNRCNMNCPVCFANAEAKGYV-YEPSLEQIEEMLDLLRSERPVPAPAVQFAGGEPL 154
Query: 156 ILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ +++ + HVQI V+ R NPEL + L AG V + +
Sbjct: 155 VRED-----IVEIVAAADERGFHVQIATNG-----VEFAR-NPELAEDLHAAGLNV-VYL 202
Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLL----KGINDD 250
+ E EE AI L GI +VL+ +G+NDD
Sbjct: 203 QFDGLNPEIYEEIRGSRKVLELKKEAIKVLEREGIS----TVLVPTLARGVNDD 252
>gi|51892771|ref|YP_075462.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
14863]
gi|81388877|sp|Q67NX5|RIMO_SYMTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|51856460|dbj|BAD40618.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
14863]
Length = 485
Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
LK+ C C FC R +++ A + ++E I + +
Sbjct: 163 TAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDEARRLAGMG-VRELVVISQDTTYY 221
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
G D + L ++L+ L + ++ +R H P RI ELI+ +
Sbjct: 222 GLD--LYRKPMLARLLRELAQVDGIRWIRIHYS----YPTRITDELIEVI 265
>gi|310828246|ref|YP_003960603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
KIST612]
gi|308739980|gb|ADO37640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
KIST612]
Length = 439
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 18/140 (12%)
Query: 72 EEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
ER I D++H ++ + +YP + + +++ C +C +C + S+
Sbjct: 123 GERIFEIWDDSHEIIEDLPVDRKYPFKSFVTIMNGCNNFCTYC-----IVPYTRGREVSR 177
Query: 130 DTEAALAYIQ--EKSQIWEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHS 182
E + + EV G + + +L+ L I+ ++ +RF +
Sbjct: 178 QPEKIIEEVTRLADEGCLEVTLLGQNVNSYGNDLKTGYHFADLLRDLNQIEKIKRIRFMT 237
Query: 183 RVPIVDPQRINPELIQCLKE 202
P+ + E+I+ + +
Sbjct: 238 SH----PKDLTDEVIEAIAQ 253
>gi|256751942|ref|ZP_05492812.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749147|gb|EEU62181.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 522
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ + C C FC +G + S D + + +++ + + + TGG+PLI
Sbjct: 206 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDCKQLVRFLKGNN--YHIQITGGEPLI 259
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
L +++ L+ H+ + + + + I+ E I+ LKE+ V I
Sbjct: 260 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVVQVSIYA 311
Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245
H +E + I+ + N GI L + VL K
Sbjct: 312 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 351
>gi|119897898|ref|YP_933111.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
gi|119670311|emb|CAL94224.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
Length = 357
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 33/181 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C RE+ +G +LS ++ + + ++ TGG+
Sbjct: 39 ISVTDRCNFRCVYCMPREVFDKDYPFLPRGQLLSFEEILRVARLFVAR-GVRKIRITGGE 97
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
PL+ ++++++ L + V+ L + + P L + L++AG
Sbjct: 98 PLLRKD--IERLVEMLAALDGVE-LTLTTNGV------LLPRLAKKLRDAGLHRVTVSLD 148
Query: 210 ---------AIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIND-DPEILANLM 258
A++P E + I+ +AG + V+ +G ND D E +A
Sbjct: 149 ALDDATFRRMNDADYPVE---RVLEGIAAARDAGFEGIKVNMVVKRGTNDQDIEAMAQHF 205
Query: 259 R 259
R
Sbjct: 206 R 206
>gi|310658041|ref|YP_003935762.1| radical sam domain-containing protein [Clostridium sticklandii DSM
519]
gi|308824819|emb|CBH20857.1| Radical SAM domain protein [Clostridium sticklandii]
Length = 304
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 38/210 (18%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI- 138
D + + +KGI+ + L C C +C R + E A+ +
Sbjct: 14 DMHFTKVKGILSPKNG---MNLYRGCTHGCIYCDSRSTCYQMNHKFEDIEIKENAIELLE 70
Query: 139 ----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQ 190
+++ + + + DP I +L+ K L V RF ++ IV
Sbjct: 71 DALKRKRKKCMIGMGSMTDPYIPEEIKLKHTRKALEV---VSRYRFGITLITKSNIVL-- 125
Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLS 239
R + +L++ + E K V + E ++E A+ L +AGI ++
Sbjct: 126 R-DLDLLKEINEKTKCVVQMTLTTYDEELCKEIEPNVSTTKERFEALLTLRDAGIPTVVW 184
Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPY 269
+ LL IND E L L I Y
Sbjct: 185 LTPLLPYINDTEENL---------LGILNY 205
>gi|288801250|ref|ZP_06406705.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288331861|gb|EFC70344.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 447
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + +SS + E A + E++ TG
Sbjct: 154 RTRYFLKVQDGCSYFCTYCTIPFARGFSRNPSISSLVEQAEQA-----AREGGKEIVLTG 208
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + +++ ++K L ++ ++ R S ++P ++ E+I+ +
Sbjct: 209 VNIGDFGVSTNETFFDLIKALDKVEGIKRFRISS----LEPDLLSDEIIEYCANSR---A 261
Query: 209 IAIHA 213
H
Sbjct: 262 FMPHF 266
>gi|282856950|ref|ZP_06266205.1| radical SAM domain protein [Pyramidobacter piscolens W5455]
gi|282585241|gb|EFB90554.1| radical SAM domain protein [Pyramidobacter piscolens W5455]
Length = 344
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 29/153 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151
+ C C+ C+ + ++S + V TG
Sbjct: 9 WHITDDCDQRCKHCY---IYSGGAKRCVNSMSWAQMEDVLANCHDFCSVYRRRPYFYITG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVY 208
GDP++ ++LK LR + V + +P ++ + LKE G +
Sbjct: 66 GDPILHPD--FWRLLKKLRKMD-------APFVILGNPFHLDDTVCARLKELGCEQYQLS 116
Query: 209 I----AIH--ANHPYEFSEEAIAAISRLANAGI 235
+ H P F + IS L AGI
Sbjct: 117 LDGLRETHDWFRRPGSFDC-TLEKISALKKAGI 148
>gi|282163555|ref|YP_003355940.1| hypothetical protein MCP_0885 [Methanocella paludicola SANAE]
gi|282155869|dbj|BAI60957.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 375
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 13/115 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R P + +++ C + C +C + L ++ + + + +V +
Sbjct: 5 RSPRSVDIEITGKCNLRCLYC--SHFTSASDISNDLPKEEWLEFFKGL-NRCSVMDVTLS 61
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG+P S ++++++ + + +RF + + I EL L +
Sbjct: 62 GGEPFCRSD--IREIIEGII----LNRMRF---SILTNGTLITDELAAFLSSTRR 107
>gi|270295900|ref|ZP_06202100.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
gi|270273304|gb|EFA19166.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
Length = 438
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C YC +C G + ++S +A+ A + +I GD
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++K L ++ ++ R S ++P + E+I+ + + + H
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260
Query: 214 NHP-YEFSEEAIAAISR 229
+ P S+E + + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277
>gi|256545382|ref|ZP_05472745.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
gi|256398943|gb|EEU12557.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
Length = 432
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG 152
R +K+ C +YC +C ++S+D + + + + E++ TG
Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGYKEIVLTGI 196
Query: 153 DPLILS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L V++ + I ++ +R S ++P+ I+ E ++ +K+ K
Sbjct: 197 HVASYGKDFDLDISLIDVIEHIAKIDGIERIRLSS----MEPRHIDREFLKRMKDTKK 250
>gi|226324639|ref|ZP_03800157.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
gi|225207087|gb|EEG89441.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
Length = 441
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 26/133 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + +D + + E EV+ TG
Sbjct: 144 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSR--KKEDVVEEVRTLAEH-GYQEVVLTGI- 199
Query: 154 PLILSHKRLQK-------------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
LS L+ +++ + ++ ++ +R S ++P+ + E + L
Sbjct: 200 --HLSSYGLEWKDENGKQTEGLLDLIRAVHGVEGIKRIRLGS----LEPRIVTEEFAKEL 253
Query: 201 KEAGKPVYIAIHA 213
K I H
Sbjct: 254 ACLPK---ICPHF 263
>gi|220903851|ref|YP_002479163.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868150|gb|ACL48485.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 296
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 66/200 (33%), Gaps = 54/200 (27%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
HR R L + C V C F RR G + + EAAL +++
Sbjct: 18 AHRSFGRAHLPVAAGCNVQCGFYDRRYSCVNESRPGVTARLLEPEEALEAALRAVKQMPH 77
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVP---------------- 185
+ + G GDPL + + L L+ LR + H+ + +
Sbjct: 78 LSVIGIAGPGDPLADAGRTLHT-LEALRKALPHILLC-LSTNGLALPLHAAALSSLGVGH 135
Query: 186 ------IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA---------ISRL 230
VDP I ++ + + + AA I RL
Sbjct: 136 VTVTVNAVDPS-IGADIYTWVSDG------------ARRLTGTDAAALLLERQEEGIRRL 182
Query: 231 ANAGIILLSQSVLLKGINDD 250
AG+ + SV++ GIND
Sbjct: 183 KAAGVTVKINSVVIPGINDR 202
>gi|190574699|ref|YP_001972544.1| putative molybdenum cofactor biosynthesis protein A
[Stenotrophomonas maltophilia K279a]
gi|226707389|sp|B2FUM0|MOAA_STRMK RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|190012621|emb|CAQ46249.1| putative molybdenum cofactor biosynthesis protein A
[Stenotrophomonas maltophilia K279a]
Length = 326
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 55/158 (34%), Gaps = 11/158 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L C C +C + L + + + ++ TGG+P +
Sbjct: 17 LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
L +++ T+ + ++ + + +P P R + ++ +
Sbjct: 76 D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTIT 133
Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD 250
H E ++ G+ + +VLL+G+NDD
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDD 169
>gi|167903657|ref|ZP_02490862.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei NCTC 13177]
Length = 370
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K L+ +++ L + V
Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119
>gi|160890923|ref|ZP_02071926.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
gi|317479661|ref|ZP_07938785.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
gi|156859922|gb|EDO53353.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
gi|316904162|gb|EFV25992.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
Length = 438
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C YC +C G + ++S +A+ A + +I GD
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++K L ++ ++ R S ++P + E+I+ + + + H
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260
Query: 214 NHP-YEFSEEAIAAISR 229
+ P S+E + + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277
>gi|158320492|ref|YP_001512999.1| radical SAM domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158140691|gb|ABW19003.1| Radical SAM domain protein [Alkaliphilus oremlandii OhILAs]
Length = 342
Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 30/186 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ CP C FC ++++ G + EA L ++++ ++ E+ F GG
Sbjct: 10 IFIPHRGCPHDCSFCNQKKIAGIGTDVTAEQVLEIIEAQLEHLKDVNRPKEIAFYGG-SF 68
Query: 156 I-LSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
L +++ +++L + +Q +R +R P IN E++Q L G +
Sbjct: 69 TGLPYEQQRQLLAMAYEKKKLNFIQDIRISTR-----PDYINEEILQLLGSYGVSIIELG 123
Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLM 258
+ N H E + A + + I L Q V L G D E +
Sbjct: 124 VQSTDPTVLELNNRGHSKE---DVYRAAALIKKQNIQLGLQMMVGLYG--DTKEKMLRTA 178
Query: 259 RTFVEL 264
R ++
Sbjct: 179 RDIIDC 184
>gi|313893435|ref|ZP_07827007.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
str. F0412]
gi|313442076|gb|EFR60496.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
str. F0412]
Length = 431
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
R +K+ C YC FC + L S+ E + + E++ TG
Sbjct: 145 RAFMKIQEGCNNYCSFC-----IIPYTRGKLKSRKIEDIVEEAKRLVDHGFHEIVLTGIH 199
Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G+ + R L V+K L I + +RF S ++ ++ EL++ L + K V
Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPELYRIRFGS----IESVEVSDELVE-LMDTDKRVC 254
Query: 209 IAIH 212
+H
Sbjct: 255 PNLH 258
>gi|187932620|ref|YP_001885098.1| hypothetical protein CLL_A0897 [Clostridium botulinum B str. Eklund
17B]
gi|187720773|gb|ACD21994.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 434
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C FC G+ + + + E EVI +G
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA--TCSKKPEKVLEEVKKLAEH-GFKEVILSGIH 197
Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L +L+ + I+ + +R S ++P E+I +K K
Sbjct: 198 TASYGVDLGTGVTLISLLEDIEKIEGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250
Query: 209 IAIHA 213
+ H
Sbjct: 251 LCPHF 255
>gi|330444283|ref|YP_004377269.1| MiaB-like tRNA modifying protein [Chlamydophila pecorum E58]
gi|328807393|gb|AEB41566.1| MiaB-like tRNA modifying enzyme [Chlamydophila pecorum E58]
Length = 425
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R +K+ C +C +C + G + L I+ + EV+ +G
Sbjct: 138 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPS-----QEILEEIRTLIEGGYREVVISG 192
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
GD L +L+ + + ++ LR S +DP + +L Q L
Sbjct: 193 INVGD-YSHEGDSLASLLRKIDMLPGLERLRVSS----IDPDDVQEDLCQAL 239
>gi|154253144|ref|YP_001413968.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
lavamentivorans DS-1]
gi|154157094|gb|ABS64311.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
lavamentivorans DS-1]
Length = 345
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 21/162 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 30 VSVTDRCDFRCVYCMSEHMNFLPKPELLTLEELDRVCSAFIA-KGVRKLRLTGGEPLVRR 88
Query: 159 H--KRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ + + L + + + S++ R +L + + +++
Sbjct: 89 DVMTLIRSLGRHLESGALDELTLTTNGSQL-----ARYADDLHAA---GIRRINVSLDTL 140
Query: 215 HPY---EFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
+P E + + + I+ AG+ + +V LKG+N
Sbjct: 141 NPDLFAEITRWGRLPQVLDGIAAAKRAGLQIKINTVALKGVN 182
>gi|152991807|ref|YP_001357528.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1]
gi|166217892|sp|A6Q6R2|MOAA_SULNB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|151423668|dbj|BAF71171.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1]
Length = 326
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 15/180 (8%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C + K +LS ++ + + + ++ TGG+PL+
Sbjct: 15 VSVTERCNFRCQYCMPEKPFSWVPKENLLSFEELFLFMK-VAMDEGVNKIRITGGEPLLR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI------AI 211
L +K + K L + + PQ + ++ + +
Sbjct: 74 ED--LDSFIKMIHDYKPDIDLALTTNAYL-LPQ--TAQKLKDAGLKRLNISLDSLKPEVA 128
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP--EILANLMRTFVELRIKPY 269
H + + + I + G+ + V LKGIND+ +++ M +++R Y
Sbjct: 129 HQIAQKDVLGQVLKGIDKALEVGLGVKINMVPLKGINDNEILDVMEYCMDRNIKIRFIEY 188
>gi|20094416|ref|NP_614263.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
gi|19887500|gb|AAM02193.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
Length = 403
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ R P+ + + + CP C C + T LS++D A+ + V
Sbjct: 85 LGRRVPEAVTMAVTQRCPCNCVHCSADRR----RPTELSTEDWHRAIRE-ALDLGTYNVT 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
FTGGDPL L ++++ +
Sbjct: 140 FTGGDPLFRED--LPELIQAVDD 160
>gi|331083857|ref|ZP_08332966.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 6_1_63FAA]
gi|330403282|gb|EGG82842.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 446
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
LK+ C C +C ++ G+ + + + + Y+ + + E+I G
Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D I K L K+LK L I +Q +R P+ I PELIQ +KE K
Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253
>gi|291557494|emb|CBL34611.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
[Eubacterium siraeum V10Sc8a]
Length = 480
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 17/141 (12%)
Query: 98 LLKLLHVCPVYCRFC-FRRE-------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
L + CP C +C F ++G G +L D A + + ++ V
Sbjct: 160 LYVSIPFCPSRCSYCSFISASGEGALKLIGDYFGLLLKELDIYADIVK-RFSLKVDTVYI 218
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
GG P LS +L +++ L + +R + P I + ++ LK G + +
Sbjct: 219 GGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRRIS 276
Query: 209 IAIHANHPYEFSEEAIAAISR 229
I P ++ + A+ R
Sbjct: 277 IN-----PQSMNDSVLEAVGR 292
>gi|120554396|ref|YP_958747.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324245|gb|ABM18560.1| Radical SAM domain protein [Marinobacter aquaeolei VT8]
Length = 298
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 41/170 (24%)
Query: 97 ILLKLLHVCPVY-CRFC---------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
++L + + C C FC FR D E A A + +
Sbjct: 22 LILPVTNGCSWNQCTFCEMYTQPQKKFRARKPEDI------RADIEKAAAAFGD---VRR 72
Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP---QRINPELIQCLKE 202
V GD ++L +RL +++ L R ++ + P + + E + L+E
Sbjct: 73 VFLADGDAMVLPTRRLLEIIADLKRAFPGLERV-----SSYCLPRNLAKKSVEELAQLRE 127
Query: 203 AGKPVYIAIHANHPYEF--------SEE-AIAAISRLANAG----IILLS 239
AG + + E + E +A+ ++ AG +++L+
Sbjct: 128 AGLKILYVGMESGDDEVLRRVNKGETWESTRSALVKIREAGLVSSVMVLN 177
>gi|325847827|ref|ZP_08170049.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480845|gb|EGC83898.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 166
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
G + +Y R + C C+ CF E + G + + K T+ ++Y+++
Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNNEYMNPNFGNLWTEKQTQEVISYLKKD 62
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
++ + GG+P S + L K++K +R
Sbjct: 63 -EVEGLTILGGEPFE-STEDLIKIVKKIRE 90
>gi|167720586|ref|ZP_02403822.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei DM98]
gi|167739576|ref|ZP_02412350.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 14]
gi|167816780|ref|ZP_02448460.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 91]
gi|167825186|ref|ZP_02456657.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 9]
gi|167846683|ref|ZP_02472191.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei B7210]
gi|167895272|ref|ZP_02482674.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 7894]
gi|167911906|ref|ZP_02498997.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei 112]
gi|167919900|ref|ZP_02506991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei BCC215]
gi|254191222|ref|ZP_04897726.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pasteur 52237]
gi|254195839|ref|ZP_04902265.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei S13]
gi|157938894|gb|EDO94564.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei Pasteur 52237]
gi|169652584|gb|EDS85277.1| molybdenum cofactor biosynthesis protein A [Burkholderia
pseudomallei S13]
Length = 370
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K L+ +++ L + V
Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119
>gi|283782364|ref|YP_003373119.1| radical SAM domain-containing protein [Pirellula staleyi DSM 6068]
gi|283440817|gb|ADB19259.1| Radical SAM domain protein [Pirellula staleyi DSM 6068]
Length = 518
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 32/170 (18%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
L+++ C + C C+ G + +V D + A+ + +V +GG+P I
Sbjct: 102 LVEVTSSCNLTCPMCYASSAPGGKHTSV---DDCKLAIDRLVAVEGRADVCQLSGGEPTI 158
Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L+ ++ I +V I +RF S +P L++ +++ + + I
Sbjct: 159 HP--ELETIVDYALAQPIDYVMINTNGIRFAS----------DPALVEFIRQRRERMEIY 206
Query: 211 IHANHPY-EFSEEAI---------AAISRLANAGIILLSQSVLLKGINDD 250
+ E + + A+ L AGI + + L G+NDD
Sbjct: 207 FQLDGLNDEIALKLRGEKLLERKIKALDALEAAGIHVTLVATLQAGVNDD 256
>gi|254446971|ref|ZP_05060438.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HTCC5015]
gi|198263110|gb|EDY87388.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HTCC5015]
Length = 329
Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + L + C + CR+C LS + + + + +V T
Sbjct: 10 RKVTYVRLSVTDRCDLRCRYCMPEGFSDYHVPDHWLSVDEWLHLVGALAR-GGVQKVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GG+PL+ + L ++++ + I+ ++ + +
Sbjct: 69 GGEPLL--RRELPELIEGISQIEGIEDIALST 98
>gi|154497024|ref|ZP_02035720.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
29799]
gi|150273423|gb|EDN00551.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
29799]
Length = 493
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 82/252 (32%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS 142
+ + L + CP C +C V + G L ++ EAA ++
Sbjct: 166 KEDEISLYVGIPFCPTRCAYCS---FVSADVGKALKLLPPYLEALFREVEAAGDLLKRLG 222
Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDPQRINPELIQC 199
+ V GG P LS ++L ++ +R H+ + R + + P I E +
Sbjct: 223 LYVRTVYIGGGTPTTLSAEQLSALMGHIRT--HIDLSR-CTEYTVEAGRPDTITAEKLAA 279
Query: 200 LKEAG-KPVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS------ 239
LKE G V + P S++ + A+ R + N+GI ++
Sbjct: 280 LKENGADRVSVN-----PQSMSDKVLRAMGRSHTAADILRAYELVRNSGIPCVNMDLIAG 334
Query: 240 --------------Q---------SV----LLKG------------INDDPEILANLMRT 260
Q +V L KG D ++L T
Sbjct: 335 LPEDSREGFRSTLDQVLSMDPANITVHTLALKKGSRLMTEGGSLPTAEDVADMLDYAWTT 394
Query: 261 FVELRIKPYYLH 272
PYYL+
Sbjct: 395 LRGAGYVPYYLY 406
>gi|145301230|ref|YP_001144070.1| radical SAM domain-containing protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142856007|gb|ABO92322.1| radical SAM domain protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 484
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 21/162 (12%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI----------LLKLLHVCPVYCR 110
+P EL + + G + L+ + +Y R + + C C
Sbjct: 58 LPTDTELYQELKRKSFLAGSEDSYALRCLSAKYRQRKSFLSGGPGLHIFVITLRCGNSCE 117
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTL 169
+C + +S + A+ + E I F GG+PL+ ++K +
Sbjct: 118 YCQASRKSVTSSQHDMSQETARNAVDRVFESPNQRITIEFQGGEPLLAFD-----LIKFI 172
Query: 170 RYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV 207
H + H + + Q I E++ +K +
Sbjct: 173 VDYAHEKN-SVHGKSLVFVIATSLQYITDEMLDFIKLHSIQI 213
>gi|295402407|ref|ZP_06812361.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112044|ref|YP_003990360.1| radical SAM protein [Geobacillus sp. Y4.1MC1]
gi|294975570|gb|EFG51194.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217145|gb|ADP75749.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1]
Length = 373
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 24/180 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD
Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKRLIDDIYEMEQPL-LVFTGGD 65
Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ L K I + LR S P P + E I+ KE G + A
Sbjct: 66 PLMRPDVFELAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEIGLSRW-AFS 115
Query: 213 ANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ P E + AI L I + +V+ + + +A L+
Sbjct: 116 LDGPNAEIHDRFRGMPGSFDLTIKAIEYLHELDIPVQINTVISRYNVHALDEMAKLVEKL 175
>gi|148657495|ref|YP_001277700.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
gi|148569605|gb|ABQ91750.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
Length = 800
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 90 VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+H PDR++ + + + C + C C+ G ++ + D + +
Sbjct: 444 LHTPPDRLVNAYIHITYACNLTCAHCY--AEAGPRRREAMPVGDVLRLAEE-AARLGFQK 500
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
V+ TGG+PL+ + +L+ L + ++ R R + P + P+LI L A
Sbjct: 501 VVITGGEPLMHPQR--DALLEGLAALRPLLRPTRLALRTNLAYP--LTPKLIAALVHAAD 556
Query: 206 PVYIAI 211
V +++
Sbjct: 557 QVIVSL 562
>gi|255658518|ref|ZP_05403927.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
gi|260849318|gb|EEX69325.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
Length = 332
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
+ C +YC C+R G + L++++ + L+ I + + +IF+GG+PL+
Sbjct: 8 TTNACNMYCAHCYRDA--GCRAEEELNTEEGKKLLSEIAK-AGFKIMIFSGGEPLMRPDI 64
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L K L I V F + + I ++ + LKEAG
Sbjct: 65 LELVKYASDLHMIP-V----FGTNGTL-----ITLDMAKKLKEAG 99
>gi|15674141|ref|NP_268316.1| hypothetical protein L19128 [Lactococcus lactis subsp. lactis
Il1403]
gi|12725219|gb|AAK06257.1|AE006444_8 unknown protein [Lactococcus lactis subsp. lactis Il1403]
Length = 707
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 28/184 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C+FC+ + +G L + L I + + +V GG+P
Sbjct: 13 WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTQVSLLGGEP--TE 65
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216
+ + ++ L LR S + Q++ N ELI+ L ++ + I P
Sbjct: 66 CEYFEYIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118
Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264
+ +A+ +++ L + V+ K N + + ++ T EL
Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178
Query: 265 RIKP 268
R+ P
Sbjct: 179 RLMP 182
>gi|330994803|ref|ZP_08318725.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
gi|329758064|gb|EGG74586.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
Length = 339
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 21/166 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C +M K +LS + E A + + TGG+PL+
Sbjct: 19 VSVTDRCDMRCIYCMAEDMTFLPKAEILSLTELERLCAAFIRH-GVRRLRITGGEPLVRR 77
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
+ + + L + L + R+ + L+ G + + +++
Sbjct: 78 DVMAFFREMGQWLGRPGGQPGLDELTLTTNA-----SRL-AAFAEDLRACGVRRINVSLD 131
Query: 213 ANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250
+ P F+ I AG+ L +V + G+NDD
Sbjct: 132 SLDPARFARITRRGNLSRTLDGIRAAREAGLALRINTVAMAGVNDD 177
>gi|291563253|emb|CBL42069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
bacterium SS3/4]
Length = 476
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
I +YP + + ++ C +C +C + G ++ +D + + + EV+
Sbjct: 178 IERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--EDIIKEIEGLVAD-GVVEVM 234
Query: 149 FTGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K
Sbjct: 235 LLGQN-VNSYGKNLEQPITFAELLRRVEKIEGLERIRFMTSH----PKDLSDELIETMKN 289
Query: 203 AGKPVYIAIH 212
+ K + +H
Sbjct: 290 S-KKICSHLH 298
>gi|167563554|ref|ZP_02356470.1| molybdenum cofactor biosynthesis protein A [Burkholderia
oklahomensis EO147]
Length = 370
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199
PL+ K ++ +++ L + V + + +V R+ L
Sbjct: 100 PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 157
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258
K + N S + + I AG + V+ +G ND + +
Sbjct: 158 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 209
Query: 259 RTFVELRIK 267
R F +
Sbjct: 210 RRFKGTGVV 218
>gi|148243988|ref|YP_001220226.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acidiphilium cryptum JF-5]
gi|146400551|gb|ABQ29084.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acidiphilium cryptum JF-5]
Length = 235
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 37/164 (22%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILSHKR 161
CP+ CR+C V Q S AL ++ ++ + + V+F+GG+P + +
Sbjct: 31 RGCPLRCRYC---HNVDLQARRGTSPLRWLEALTWLDQRRGLLDSVVFSGGEPTM--DRC 85
Query: 162 LQKVLKTLRY--------------------IKHVQILRFHSRVPIVDPQRINPE------ 195
L+++++ +R + +Q + + P D RI
Sbjct: 86 LEQMIRDVRSLGFEVALHTAGVSPKRLERVLPMLQWVGLDIKAPFGDYARITGSEASGAR 145
Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS-RLANAGI 235
+ L+E+G P + HP + + ++ L +GI
Sbjct: 146 ARVALAMLRESGVPYEVRTTV-HPALLDAQVLQTLALDLRASGI 188
>gi|325971811|ref|YP_004248002.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
gi|324027049|gb|ADY13808.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
Length = 437
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y R LK+ C C +C R + + ++ + + E ALA E S E++ TG
Sbjct: 142 YHSRAYLKIQDGCDNSCAYC-RVHIARGKAVSLQTEQVIERALA--LEASGFQEIMLTGV 198
Query: 153 DPLILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + + L+K+L L +R R+ ++P I+ L+ L +
Sbjct: 199 N-LTMYDHQGEGLGGLLEKLLAKLSS-----SVRI--RLSSMEPDHIDDRLLDVLTDRRM 250
Query: 206 PVYIAI 211
+ I
Sbjct: 251 QPHFHI 256
>gi|322434558|ref|YP_004216770.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162285|gb|ADW67990.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
Length = 359
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 59/214 (27%), Gaps = 64/214 (29%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C CR+C+ R + + Y +++E LI
Sbjct: 65 INPYRGCEFGCRYCYARY----THEFLAAKNRPADTPDY--RDPELFER-------LIFL 111
Query: 159 HKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKEA------- 203
+ +L+ LR I + + + DP RI L++
Sbjct: 112 KENAAWLLEQELRKIDPAEEIALGT---ATDPYQPIERTARITRSLLEVFARKSGYRLGI 168
Query: 204 -------------------GKPVYIAIHANHP-----YEFSEEA------IAAISRLANA 233
+ + P A AA+ L A
Sbjct: 169 ISKSQLILRDIDLLSEISKRNTLVLHTTITTPDAKLARVLEPRAPRPDLRFAAVKALREA 228
Query: 234 GIIL--LSQSVLLKGINDDPEILANLMRTFVELR 265
G+ + L S LL GI D+ + L + R E
Sbjct: 229 GLTVGILC-SPLLPGITDNEKALDAMARRAAEAG 261
>gi|296446184|ref|ZP_06888132.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
gi|296256378|gb|EFH03457.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
Length = 400
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 46/148 (31%), Gaps = 25/148 (16%)
Query: 57 ARQFI-------PQKEELNILPEEREDP------------IGDNNHSPLKGIVHRYPDRI 97
ARQ I P E + R DP +G+ +PL R
Sbjct: 48 ARQAIRRLHRERPSAEIVVAGCAARIDPASFATMAGVTRVLGEAQDAPLARSASEGQTRA 107
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--PL 155
L + + C C FC G + D A + + E++ TG D
Sbjct: 108 FLAVQNGCDHRCSFCVIP--FGRGPSRSAAPADVIAEARRLVAVGR-REIVLTGVDLTSY 164
Query: 156 ILSHKRLQKVLKT-LRYIKHVQILRFHS 182
L + + LR ++ LR S
Sbjct: 165 RHEDVTLGALAREILRATPQLERLRLSS 192
>gi|260587855|ref|ZP_05853768.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
gi|260542120|gb|EEX22689.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
Length = 446
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
LK+ C C +C ++ G+ + + + + Y+ + + E+I G
Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D I K L K+LK L I +Q +R P+ I PELIQ +KE K
Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253
>gi|87198947|ref|YP_496204.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
DSM 12444]
gi|87134628|gb|ABD25370.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
DSM 12444]
Length = 339
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 34/170 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C M K VLS ++ L +I + ++ TGG+PL+
Sbjct: 25 LSVTDRCDLRCAYCMPERMEFLPKAEVLSLEELHRLSLHFIAR--GVRKIRLTGGEPLVR 82
Query: 158 SH--KRLQKVLKTLRY-IKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200
++ + + L + + + +R+ V ++ E L
Sbjct: 83 RDMVDLVRALGRKLGDGLDELTMTTNGTRLAEFAGDLAAAGLRRINVSLDTLDREAFARL 142
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + + I+ AG+ + +V LKGIN+D
Sbjct: 143 SR--------------RDVLPQVLEGIAAAREAGLRVKINAVALKGINED 178
>gi|319787616|ref|YP_004147091.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
suwonensis 11-1]
gi|317466128|gb|ADV27860.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
suwonensis 11-1]
Length = 339
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
L ++ C C +C + V GT +S+ E + + + ++ TGG+P
Sbjct: 24 LSVIDACNFRCGYCMPADRVPDDHGTSAASRMSFDQIETLVRGFVQ-VGVRKLRLTGGEP 82
Query: 155 LILSHKRLQKVLKTLRYIKHVQIL 178
L+ + L +++ L I ++ L
Sbjct: 83 LL--RRNLPELIARLARIPGIEDL 104
>gi|26250136|ref|NP_756176.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
gi|26110565|gb|AAN82750.1|AE016768_168 Putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli CFT073]
Length = 445
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|20089140|ref|NP_615215.1| hypothetical protein MA0242 [Methanosarcina acetivorans C2A]
gi|19914008|gb|AAM03695.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 373
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R +++ CP CR+C + G + +VL + L +I
Sbjct: 142 RAPIEISRGCPWGCRYCQTPRLFGREVRHRSIDSVLKNARYYDDLRFIASN-----AFAY 196
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +++K+L L + +I F + V P+ + E ++ +++
Sbjct: 197 GSDGIHPRFDKVEKLLSALHELPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 248
>gi|253681883|ref|ZP_04862680.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561595|gb|EES91047.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 444
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 39/176 (22%)
Query: 57 ARQFIPQKEELNILPEER--EDPIGDNNHSPLKGIVHRYPD-------RIL--------L 99
+Q IP+ + + + + +D I + + K +Y D RIL +
Sbjct: 90 LQQLIPEIDIMLGVNDYANIQDYIDEFFENKNKICKCKYSDVSINEGKRILTTDKHVAYI 149
Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDP 154
++ C +C +C ++ G + + S K+ A + E+I G D
Sbjct: 150 RISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVGQDT 201
Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
I S +L +++ + I+ ++ +R V P+ I ELI+ +K K
Sbjct: 202 AIYGRDIYSENKLPDLIRAISEIESIEWIR----VLYTYPEEITDELIEEIKNNDK 253
>gi|167772323|ref|ZP_02444376.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM
17241]
gi|167665426|gb|EDS09556.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM
17241]
Length = 434
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 36/164 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ L+ H C C FCF +M + ++ Y ++ +F G+
Sbjct: 76 ETYLMDRQHTCKNKCVFCFVDQMPPGMRDSL-----------YFKDDDSRMSFLF--GNY 122
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ L++ + I + +R P+ ++ + HA
Sbjct: 123 ITLTN-----LTDA--DIDRIIKMRI---SPVNISVHTTDPALRV------QLMKNPHA- 165
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
++ I RL AGI + +Q VL G+ND + L
Sbjct: 166 ------AGSLRYIGRLTGAGIRVNAQLVLCPGLNDGAALERTLC 203
>gi|313682137|ref|YP_004059875.1| miab-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
gi|313154997|gb|ADR33675.1| MiaB-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
Length = 415
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V ++ +K E + + E + TG +
Sbjct: 132 KSRAFIKIQEGCNFRCSYCII-PFVRGDARSMDEAKILEQ-IQRLASN-GFGEFVLTGTN 188
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + +++K + I+ V+ +R S ++P +IN + L E ++
Sbjct: 189 VGSYGQGEGRNIAELMKKMSLIRGVRRIRVGS----LEPIQINESFREILSEPWLERHLH 244
Query: 211 IHANH 215
I H
Sbjct: 245 IAIQH 249
>gi|94499363|ref|ZP_01305901.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65]
gi|94428995|gb|EAT13967.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65]
Length = 330
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 21/180 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C C +C +M + VLS + E E + + TGG+PLI
Sbjct: 15 VRISVTDRCDFRCVYCMAEDMTFIPRKDVLSFEQIELISQAFVE-LGVTSIRLTGGEPLI 73
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
K + ++ L + + + + PQ L LK+AG + I++ +
Sbjct: 74 --RKNIVDLVAKLNQLDGLNEITMTTNG-SQLPQ-----LAHGLKQAGLSRLNISLDSLK 125
Query: 216 PYEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
P F E I AG + +V+L+G NDD + +L++ + I
Sbjct: 126 PERFKELTRTGDLQNVLVGIEAAKQAGFDRIKLNAVILRGRNDD--EILDLVKFVRDQGI 183
>gi|303237126|ref|ZP_07323696.1| MiaB-like protein [Prevotella disiens FB035-09AN]
gi|302482513|gb|EFL45538.1| MiaB-like protein [Prevotella disiens FB035-09AN]
Length = 452
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + + S + E A K E++ TG
Sbjct: 159 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIQSLVEQAEQA-----AKEGGKEIVLTG 213
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + + ++K L ++ ++ R S ++P I+ ELI+ +
Sbjct: 214 VNIGDFGRTTSESFLDLVKALDQVEGIERFRISS----LEPDLIDDELIRYCATSR---A 266
Query: 209 IAIHA 213
H
Sbjct: 267 FMPHF 271
>gi|291519359|emb|CBK74580.1| SSU ribosomal protein S12P methylthiotransferase [Butyrivibrio
fibrisolvens 16/4]
Length = 442
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 14/113 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
LK+ C C +C + G + + ++ + + +I E G
Sbjct: 149 LKIAEGCNKRCTYCIIPYIRGDYR--SVPMEEILSEAKQLVADGVKEIILVAQETTVYGM 206
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D I + K L ++L L I ++ +R P+ I ELI+C+ K
Sbjct: 207 D--IYNKKSLPELLNKLCEIDGLEWIRI----LYAYPEEITDELIECMASQPK 253
>gi|237732747|ref|ZP_04563228.1| radical SAM-superfamily protein [Mollicutes bacterium D7]
gi|229384170|gb|EEO34261.1| radical SAM-superfamily protein [Coprobacillus sp. D7]
Length = 402
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C +C C + + S+ + + +A + ++ + + FTGG+PL+
Sbjct: 102 IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 160
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211
L++++ ++ R ++ + LKEAG + I++
Sbjct: 161 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 207
Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
H +H Y + A+ AI AG+ +SQ+V +
Sbjct: 208 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 248
>gi|168704786|ref|ZP_02737063.1| hypothetical protein GobsU_34937 [Gemmata obscuriglobus UQM 2246]
Length = 467
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C C +C +M G K ++ + + E+I D
Sbjct: 169 AYLKVSEGCDRLCTYCAIPKMRG--KHVTKPIEEVIREARELAAD-GVRELIIVAQDTTY 225
Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
RL ++L+ L +++++ +R P+ I+ ELI+ + K
Sbjct: 226 YGMDLYGRTRLAELLRELDKVENIEWIR----TLYAYPEHISDELIETFAGSKK 275
>gi|167756317|ref|ZP_02428444.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402]
gi|167703725|gb|EDS18304.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402]
Length = 366
Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C +C C + + S+ + + +A + ++ + + FTGG+PL+
Sbjct: 66 IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 124
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211
L++++ ++ R ++ + LKEAG + I++
Sbjct: 125 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 171
Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
H +H Y + A+ AI AG+ +SQ+V +
Sbjct: 172 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 212
>gi|301059325|ref|ZP_07200252.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300446554|gb|EFK10392.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 375
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
P + L + + C + CR C S +V S T+ I++ + + E+ TG
Sbjct: 21 PKILTLMVTNGCNLACRHC--WPQSVSGTESVASPVSTKTLKEIIRQWSRLDLEEICLTG 78
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL ++L+ V+ + + ++ P+ + E + + + V +++
Sbjct: 79 GEPLTHP--HWLEILRFACEQTEVKRVCLQTNATLLKPE--DCEELAGIGKREILVQVSL 134
Query: 212 HANHPYEFS--------EEAIAAISRLANAGIILLSQSVL----LKGINDDPEILANLMR 259
N E A+ + RL AG L ++V+ + + + LM
Sbjct: 135 EGNTEAEHDLVRGKGNFLAAVRGMERLVQAG--LGKRTVVALTETRH---NFPSIPRLME 189
Query: 260 TFVELRI 266
+ +
Sbjct: 190 RLSSMGV 196
>gi|266624276|ref|ZP_06117211.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479]
gi|288863884|gb|EFC96182.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479]
Length = 295
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
+H F+ +A+ I L AG+ + Q VL KG+ND E+ + R + PY
Sbjct: 2 MLH----NRFAGQALKRIDELYKAGVPMNGQIVLCKGLNDGVELERTI-RDLSK--YLPY 54
Query: 270 YLHHPDLAAGTSHFR 284
+ G S FR
Sbjct: 55 MESVSVVPVGLSKFR 69
>gi|325270230|ref|ZP_08136837.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
gi|324987531|gb|EGC19507.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
Length = 450
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S E A + E++ TG
Sbjct: 157 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AREGGKEIVLTG 211
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + + ++K L ++ ++ R S ++P I+ +LI +
Sbjct: 212 VNIGDFGETTGESFLDLVKALDRVEGIRRFRISS----LEPDLIDDDLIAYCARSR---A 264
Query: 209 IAIHA 213
H
Sbjct: 265 FMPHF 269
>gi|261855784|ref|YP_003263067.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
neapolitanus c2]
gi|261836253|gb|ACX96020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
neapolitanus c2]
Length = 482
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 20/149 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC FC G + D A +A + E+ + EV G +
Sbjct: 172 TAFVSIMEGCSKYCSFCVVPYTRGEEISRPF--DDVIAEVAELAEQ-GVREVNLLGQNVN 228
Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
++ + L +++ + I + +RF + P+ LI+ + K +
Sbjct: 229 AYRGVMHDGQIADLALLIEYIARIDSIGRIRFTTSHPV----EFTDRLIEAYRNVPK-LA 283
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIIL 237
+H P + + I L G +
Sbjct: 284 AYLHL--PVQVGSD---RILALMKRGHTV 307
>gi|153853286|ref|ZP_01994695.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
gi|149754072|gb|EDM64003.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
Length = 440
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 21/136 (15%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+ + G + Y LK+ C +C +C V +V + + A
Sbjct: 131 PLPETKRLVTTGGHYAY-----LKIAEGCDKHCTYCII-PKVRGNYRSVPMERLIKEAQE 184
Query: 137 YIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ E+I G D I K L K+LK L IK ++ +R P
Sbjct: 185 --LADQGVKELILVAQETTVYGQD--IYGEKSLHKLLKELCQIKGIRWIRL----LYCYP 236
Query: 190 QRINPELIQCLKEAGK 205
+ I+ LIQ +KE K
Sbjct: 237 EEIDDNLIQVMKEEPK 252
>gi|54301718|ref|YP_131711.1| hypothetical protein PBPRB0038 [Photobacterium profundum SS9]
gi|46915138|emb|CAG21911.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 295
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 31/165 (18%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYI-QEKSQIWEVIFTGG 152
++L++ + C C FC +M K D E L I +++ V G
Sbjct: 19 LILQVTNGCSHNQCTFC---DMYTQPHKKFRPKKPDDIERELQQIVASGTRVHRVFLADG 75
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHS----RVPIVDPQRINPELIQCLKEAGKPV 207
D + L RLQ + + + VQ R S R E + L++ G +
Sbjct: 76 DAMTLPFARLQHICSLINQYLPDVQ--RISSYCLPRNLTNK----TEEQLAELRQLGLSL 129
Query: 208 YIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239
+ E + A+ +L AG +++L+
Sbjct: 130 LYVGCESGDDEVLAKVQKGETFESSLIALKKLKAAGMKSSVMILN 174
>gi|15669680|ref|NP_248493.1| hypothetical protein MJ_1487 [Methanocaldococcus jannaschii DSM
2661]
gi|38258708|sp|Q58882|Y1487_METJA RecName: Full=Uncharacterized methyltransferase MJ1487
gi|1592124|gb|AAB99497.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 426
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 88/240 (36%), Gaps = 53/240 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
+++ CP C FC + G + +D E Y I + + ++ F +
Sbjct: 177 IEITRGCPYKCYFCQTPRIFG----KKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFG 232
Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEA--GK 205
L+ +++K+L+++R I + + F + V P+ +N E + + K
Sbjct: 233 YGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNK 292
Query: 206 PVYIAI-----------HANHPYEFSEEAIAAISRLANAGIILLSQSV-LLKGI----ND 249
+ I H H E + A+ AG+ + V + G+ +
Sbjct: 293 NLVIGAQSGSEKVLELCHRGHTVE---DVYNAVRVARKAGLGVD---VDFIFGLPGETEE 346
Query: 250 DPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEKIS 302
D E +M+ +++ K + + P + + +KI+ +++ +I
Sbjct: 347 DVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGKVDKKIIRAMRYEIP 399
>gi|67527057|gb|AAY68326.1| putative molybdenum cofactor biosynthesis enzyme [uncultured marine
bacterium 66A03]
Length = 334
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 46/193 (23%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + + C C +C +M K +L+ ++ E ++ TGG+P
Sbjct: 15 DYVRISVTDRCDFRCVYCMSEQMTFLPKKDLLTLEEIAIVCDSFIELGT-KKIRLTGGEP 73
Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRI 192
L+ + + ++K L HV+ + + R V +
Sbjct: 74 LV--RRNIMHLIKHLGT--HVKKGKLEEITITTNGSQLQKFSDLLLEAGVRRINVSIDTL 129
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
+PE + + GK + + + AG+ + +V LKGINDD
Sbjct: 130 DPEKFERITRWGK--------------LDVVLNGLDAAKKAGLKIKLNTVALKGINDD-- 173
Query: 253 ILANLMRTFVELR 265
L
Sbjct: 174 ---ELSTMLNWAG 183
>gi|78358583|ref|YP_390032.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220988|gb|ABB40337.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 464
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 44/240 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+L ++ C ++CRFCF G + + ++ V +GG+P
Sbjct: 94 TLLFEITSRCNLHCRFCFASA--GKSAPPDPDMAALRTLMDNARPRTGPCNVQLSGGEP- 150
Query: 156 ILSHKRLQKVLKTL-RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA-GKPVYI 209
+ L +++ VQ+ LR R P + Q L + G I
Sbjct: 151 TMRDD-LPQIIGMAKERFPFVQLNTNGLRIA-REPSLAAQLARAGLDSVFLQFDGTQDAI 208
Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVEL--R 265
A E + A+ L+ AGI I+L +V+ G+NDD + L
Sbjct: 209 YT-ALRGMPLLREKMEAVRLLSEAGIGIVLVPTVV-PGVNDDNIGEILRLGAALCPAVRG 266
Query: 266 IKPYYLHHPDLAAGTSHF-RLTIEEGQ-----------------KIVASLKEKISGLCQP 307
+ P SHF R +G +I+ L+++ +GL
Sbjct: 267 VH----FQP-----VSHFGRHPAPDGATRAPEQGPPPAERITLPEIMRGLEKQTAGLVTT 317
>gi|261855208|ref|YP_003262491.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus
neapolitanus c2]
gi|261835677|gb|ACX95444.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus
neapolitanus c2]
Length = 328
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + L++ + E L + E + V TGG+PL+
Sbjct: 17 LSVTDRCDLRCFYCMPEGFNDFEVPEHWLTADEIERLLGVMAEM-GLRRVRITGGEPLV- 74
Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRV-PIVDP------QRINPELIQCLKEAGKPV 207
+ ++ +++ + + ++ + +R+ + P RIN L + K
Sbjct: 75 -RRGIEDIVRRIDALPGIRDIALSTNATRLGKMAAPLKAAGVDRINVSLDTLDADRFKQ- 132
Query: 208 YIAIHANHPYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN 256
++ + I + +AG+ + V++KG+N DD E +
Sbjct: 133 -----------ITQGKLSKVIDGLMAAKDAGLSPIKLNMVVMKGVNEDDVESVLE 176
>gi|225572114|ref|ZP_03780978.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
10507]
gi|225040448|gb|EEG50694.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
10507]
Length = 488
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ + I E D I + P +YP + + ++ C +C +C + G ++
Sbjct: 171 SDRMIIDIWEGTDQIVE--DLPTD---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERS 225
Query: 124 TVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHV 175
+ ++ E +A + EV+ G + + K L + +L+ + ++ +
Sbjct: 226 REPKAIIREIEKLVA-----DGVREVMLLGQN-VNSYGKTLDEPVSFARLLEEVEQVEGL 279
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ +RF + P+ ++ ELIQ + ++ K + +H
Sbjct: 280 ERIRFMTSH----PKDLSDELIQVMAKSQK-ICRHLH 311
>gi|91773247|ref|YP_565939.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
6242]
gi|91712262|gb|ABE52189.1| FeMo cofactor biosynthesis protein nifB [Methanococcoides burtonii
DSM 6242]
Length = 312
Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 35/212 (16%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140
K H++ RI L + C + C +C R+ G + + E +++
Sbjct: 33 KNAQHKF-GRIHLAVAPKCNIQCNYCDRKFDCVNESRPGVTSEILTPQEALEKTRQVLKD 91
Query: 141 KSQIWEVIFTG-GDPLIL--SHKRLQKVLKTLRYI-------------KHVQILRFHSRV 184
I V G GDPL + + L+ + + K ++LR
Sbjct: 92 HPFIKVVAVAGPGDPLANDETFETLELIKNEFPDVTLCLSTNGLALPDKMDELLRVGVST 151
Query: 185 PIV-----DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
V DP +I +++ + GK + I + AG+++
Sbjct: 152 LTVTLNAIDP-KIQAQIVDHISYKGKSY---TGVEAAEILIANQLEGIKKAVEAGMVIKV 207
Query: 240 QSVLLKGINDD--PEILANLMR-TFVELRIKP 268
+VL+ IN D E+ + + I P
Sbjct: 208 NTVLIPEINKDHIVEVAKKIREMGVFIMNIMP 239
>gi|262277765|ref|ZP_06055558.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HIMB114]
gi|262224868|gb|EEY75327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HIMB114]
Length = 435
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154
+ + C +C+FC V S+D L I + E++ G +
Sbjct: 153 VTIQEGCDKFCKFC-----VVPYTRGPEFSRDHNKILDEILSLTDNGTKEIVLLGQNVSA 207
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L +++K + I +V+ +RF + P + ELI E K
Sbjct: 208 YKNNDISLARLIKKIAKINNVKRIRFTTSHPND----FDQELISLFGEEPK 254
>gi|258406363|ref|YP_003199105.1| ribosomal RNA large subunit methyltransferase N [Desulfohalobium
retbaense DSM 5692]
gi|257798590|gb|ACV69527.1| radical SAM enzyme, Cfr family [Desulfohalobium retbaense DSM 5692]
Length = 359
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 78/298 (26%)
Query: 11 AQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
A+ ++ IK +++ +S AL+ V PIA +P E++
Sbjct: 28 AEQIWQWLWIKGATSFEDMTNVSKSLRSALSQVF-----------PIA---LPTVAEVHT 73
Query: 70 LPEEREDPIGDNNHSPL------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ + + + + G H L C + C FC Q G
Sbjct: 74 SADGTRKFLLNLHDGHVLETVLIPGGEHF---TQCLSTQVGCNLGCTFCS-----TGQMG 125
Query: 124 TVLSSKDTEAALAYIQEKSQIWE----------VIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ E A I ++ +W+ V G+PL L+ + + L L
Sbjct: 126 LTRNLSAAEIAGQVIVARNHLWQTGTGMRLRNLVFMGMGEPL-LNWENVDNALDRL---- 180
Query: 174 HVQILRFHSRVPIVDPQRIN------PELIQCLKEAGK-PVYIAIHANHPYE-----FSE 221
H+ P+R+ P + L + K + +++HA P +
Sbjct: 181 ------IHASAMNFSPRRVTVSTVGVPGTLDALGHSHKASLAVSLHA--PNQELREKIMP 232
Query: 222 EAIAAI------SRLA------NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
A + +RL + + VLL G+ND + L+R +R K
Sbjct: 233 RAARMLPLPDLLARLRSYPMAPRQRVTIE--YVLLGGVNDSLDQARQLVRCLNGIRCK 288
>gi|170290655|ref|YP_001737471.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174735|gb|ACB07788.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 310
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + + C C FC R V ++ + ++ + + + + V TGG+PL+
Sbjct: 15 ISVTNSCNYNCFFCHREGHYVRGEE---MRPEEIGRLMRVLSKH-GVKRVKLTGGEPLMR 70
Query: 158 SHKRLQKVLKTLRY 171
L++++ L+
Sbjct: 71 RD--LEEIVSELKS 82
>gi|110643748|ref|YP_671478.1| coproporphyrinogen III oxidase [Escherichia coli 536]
gi|227883662|ref|ZP_04001467.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
gi|300985061|ref|ZP_07177267.1| radical SAM domain protein [Escherichia coli MS 45-1]
gi|300987452|ref|ZP_07178220.1| radical SAM domain protein [Escherichia coli MS 200-1]
gi|301050257|ref|ZP_07197148.1| radical SAM domain protein [Escherichia coli MS 185-1]
gi|110345340|gb|ABG71577.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli 536]
gi|222035213|emb|CAP77958.1| oxygen independent coproporphyrinogen III oxidase [Escherichia coli
LF82]
gi|227839541|gb|EEJ50007.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
gi|300298029|gb|EFJ54414.1| radical SAM domain protein [Escherichia coli MS 185-1]
gi|300306144|gb|EFJ60664.1| radical SAM domain protein [Escherichia coli MS 200-1]
gi|300408221|gb|EFJ91759.1| radical SAM domain protein [Escherichia coli MS 45-1]
gi|307555606|gb|ADN48381.1| putative coproporphyrinogen III oxidase [Escherichia coli ABU
83972]
gi|312948061|gb|ADR28888.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
857C]
gi|315291787|gb|EFU51141.1| radical SAM domain protein [Escherichia coli MS 153-1]
gi|315296048|gb|EFU55357.1| radical SAM domain protein [Escherichia coli MS 16-3]
gi|324014495|gb|EGB83714.1| radical SAM domain protein [Escherichia coli MS 60-1]
Length = 445
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|116749338|ref|YP_846025.1| molybdenum cofactor biosynthesis protein A [Syntrophobacter
fumaroxidans MPOB]
gi|116698402|gb|ABK17590.1| GTP cyclohydrolase subunit MoaA [Syntrophobacter fumaroxidans MPOB]
Length = 329
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 30/192 (15%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + G +L ++ LA I I ++ TGG+PL+
Sbjct: 18 LSITDRCNLRCTYCMPEGGVPKLAHGDILRYEEILR-LARIVTAMGISKIRITGGEPLVR 76
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQ----RINPELIQCLKEAGKPV 207
+ ++ I ++ L + R+ Q RIN L LK
Sbjct: 77 RDVLF--LCGSIAGIPQLRSLSITTNGVLLGRLAGGLFQAGIKRINVSL-DTLKPGRFAS 133
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ EE I AG + +V+++G+NDD +A+L R E
Sbjct: 134 I------TRQDCFEEVWKGIMAAHEAGFAPIKLNAVVMRGVNDD--EIADLARLTFE--- 182
Query: 267 KPYYLHHPDLAA 278
Y H
Sbjct: 183 ---YPFHMRFIE 191
>gi|323141762|ref|ZP_08076632.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
[Phascolarctobacterium sp. YIT 12067]
gi|322413751|gb|EFY04600.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
[Phascolarctobacterium sp. YIT 12067]
Length = 427
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 61/188 (32%)
Query: 90 VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
+ +YPD + + C C FCF +M+ + + Y+++
Sbjct: 64 IEKYPDEDLGLEFDSAVFDRVATCYNNCVFCFVDQMIPGMRPGL-----------YVRDD 112
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
RL + + +++ + + + ++
Sbjct: 113 -----------------DYRLSFLYGNFITLTNMK----------------DEDFERIIR 139
Query: 202 EAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
P+Y+++HA P F+ + + + L +AGI + +Q V G ND EI
Sbjct: 140 THLTPLYVSVHATDPQVRCQMMHNRFAGQLMERLQLLFDAGIQVHTQIVCCPGYND-GEI 198
Query: 254 LANLMRTF 261
LA
Sbjct: 199 LAKSFHDL 206
>gi|302872012|ref|YP_003840648.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574871|gb|ADL42662.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 341
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + CP C FC ++ + G ++ L + E L I + E+ + GG+
Sbjct: 8 IFIPQYACPFNCIFCNQKIISGEKEEVSLDRIKRQIEQGLK-INSDEHV-ELAYYGGNFT 65
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
+ +K+L+ K ++ +R +R P I+ E ++ LK K + + I
Sbjct: 66 AIDIDFQKKLLELANSFKKIKSIRISTR-----PDCIDEERLRFLKLYNVKTIELGI--- 117
Query: 215 HPYEFSEEAIAAISR 229
++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130
>gi|256842238|ref|ZP_05547742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
gi|301308989|ref|ZP_07214934.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
gi|256736122|gb|EEU49452.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
gi|300833015|gb|EFK63640.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
Length = 444
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A + E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L ++ + R S ++P I E I K
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|229198890|ref|ZP_04325581.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
gi|228584593|gb|EEK42720.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
Length = 339
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDIFKAINGRNINTKPVIKGIIAAKEAGLDVKVNMVVKKGMNDH 177
>gi|28211649|ref|NP_782593.1| Fe-S oxidoreductase [Clostridium tetani E88]
gi|28204091|gb|AAO36530.1| Fe-S oxidoreductase [Clostridium tetani E88]
Length = 433
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C + K E ++ EV +G
Sbjct: 141 KTRAFLKIQDGCNSFCSYCLI-PFARGGICSKEPKKVIEEIKKLVEH--GFKEVTLSGIQ 197
Query: 154 -PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L + + L +L+ + I+ ++ +R S + P+ ++I K
Sbjct: 198 ISLYGNDFQDNWDLITLLEEIDKIEGIERVRIGS----ISPKYFKDDIIDRFSNLKK--- 250
Query: 209 IAIHA 213
+ H
Sbjct: 251 LCPHF 255
>gi|331685157|ref|ZP_08385743.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli H299]
gi|331077528|gb|EGI48740.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli H299]
Length = 445
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|212704755|ref|ZP_03312883.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
gi|212671818|gb|EEB32301.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
Length = 399
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 34/182 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C G S+++ +A + Q+ +IFTGGDP++
Sbjct: 57 WEVTRSCNLACKHCRAEAHPEPYPGE-FSTEEAKALIDTF---PQVGNPIIIFTGGDPMM 112
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG-KPVYIAIH- 212
+ L H + L P I PEL + +KEAG I+I
Sbjct: 113 RPD------VYELVAYAHNKGLTC-----AFSPNGTLITPELARKIKEAGVNRCSISIDG 161
Query: 213 ---ANHPYEFSE------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
A+H EF ++ I L AG+ + + + ++ ++
Sbjct: 162 ADAASH-DEFRGVPGAFDASMRGIEYLKQAGVPFQINTTVTR---NNLHSFKDIFNLCER 217
Query: 264 LR 265
+
Sbjct: 218 IG 219
>gi|296332403|ref|ZP_06874864.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673684|ref|YP_003865356.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150321|gb|EFG91209.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411928|gb|ADM37047.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 501
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 153 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ +++E ++ + F GG P ++ + + + + + R V+ +R + V P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + L + + I P + E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307
>gi|212697105|ref|ZP_03305233.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
7454]
gi|212675880|gb|EEB35487.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
7454]
Length = 432
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
R +K+ C +YC +C ++S+D + + + + E++ T
Sbjct: 142 TRSYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196
Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHIAKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250
>gi|116670001|ref|YP_830934.1| molybdenum cofactor biosynthesis protein A [Arthrobacter sp. FB24]
gi|116610110|gb|ABK02834.1| GTP cyclohydrolase subunit MoaA [Arthrobacter sp. FB24]
Length = 347
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 34/182 (18%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G++ RY R L L C + C +C E + K V+S+++ + +
Sbjct: 4 GLMDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVDMLG 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
+ E+ TGG+PL+ + L ++ LR H +PI + +
Sbjct: 64 VRELRLTGGEPLVRAD--LLDIISALRQA--------HPELPIS----MTTNAVGLDKKA 109
Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
LK AG + +++ + H F++ AG+ + +VL++GI
Sbjct: 110 AGLKAAGLSRINVSLDSLHEETFTKLTRRPFLDKVLAGVDAAWAAGLGPVKLNAVLMRGI 169
Query: 248 ND 249
ND
Sbjct: 170 ND 171
>gi|294784572|ref|ZP_06749861.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 3_1_27]
gi|294487788|gb|EFG35147.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 3_1_27]
Length = 348
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|260496870|ref|ZP_05815990.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
3_1_33]
gi|260196612|gb|EEW94139.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
3_1_33]
Length = 348
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|256027059|ref|ZP_05440893.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D11]
gi|289765043|ref|ZP_06524421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D11]
gi|289716598|gb|EFD80610.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D11]
Length = 348
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|237743503|ref|ZP_04573984.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 7_1]
gi|229433282|gb|EEO43494.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 7_1]
Length = 348
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|19703498|ref|NP_603060.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|19713586|gb|AAL94359.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 348
Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|319650177|ref|ZP_08004324.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
gi|317398109|gb|EFV78800.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
Length = 504
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
I D + + + + + + + CP C +C F + ++G+V S +
Sbjct: 155 IVDRQLAVVPDLYNLKNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVNSFLGGLHFEM 214
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP 189
+++E +I V + GG P ++ + + + + + V+ +R + V P
Sbjct: 215 RKIGEWLKENDVKITTVYYGGGTPTSITAEEMDMLYEEMYDSFPDVENIREVT-VEAGRP 273
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I PE ++ LK+ + I P + +E + AI R
Sbjct: 274 DTITPEKLEVLKKWNIDRISIN-----PQSYIQETLKAIGR 309
>gi|229032383|ref|ZP_04188354.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
gi|228728946|gb|EEL79951.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
Length = 339
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I+ + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIEGLVDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177
>gi|120601413|ref|YP_965813.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561642|gb|ABM27386.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
Length = 327
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147
P + L+L + C + C FC M G+ + + + +A + + + +I V
Sbjct: 7 PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
G+P++ ++ L+ L +L I H + F+S
Sbjct: 67 GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98
>gi|134295140|ref|YP_001118875.1| molybdenum cofactor biosynthesis protein A [Burkholderia
vietnamiensis G4]
gi|134138297|gb|ABO54040.1| GTP cyclohydrolase subunit MoaA [Burkholderia vietnamiensis G4]
Length = 370
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSAMPDISGVAHT-PDGALTDRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|297529334|ref|YP_003670609.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
gi|297252586|gb|ADI26032.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
Length = 449
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L +L+ L + ++ LR S ++ +I E+I LK + K
Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLRRLRISS----IEASQITDEVIDVLKRSEK 251
Query: 206 PVYIAIHA 213
+ +H
Sbjct: 252 -IVRHLHI 258
>gi|289191984|ref|YP_003457925.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
gi|288938434|gb|ADC69189.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
Length = 426
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 57/242 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
+++ CP C FC + G + + E Y I + + ++ F +
Sbjct: 177 IEITRGCPYGCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232
Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L+ +++K+L+ +R I + + F + V P+ +N E + + +
Sbjct: 233 YGSKDGKTLNIDKVEKLLENIREILGNNGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292
Query: 208 YIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI------- 247
+ + H H E + A++ GI SV L I
Sbjct: 293 SLVVGAQSGSQRILDLCHRGHTVE---DIYNAVTTAIKKGI-----SVSLDFIFGLPGET 344
Query: 248 NDDPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEK 300
+D E +M+ +++ K + + P + + +KI+ +++ +
Sbjct: 345 EEDVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGVVNKKIIRAMRHE 397
Query: 301 IS 302
I
Sbjct: 398 IP 399
>gi|229076235|ref|ZP_04209202.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-18]
gi|228706884|gb|EEL59090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-18]
Length = 339
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|229578332|ref|YP_002836730.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228009046|gb|ACP44808.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
Length = 394
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
>gi|226324718|ref|ZP_03800236.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
gi|225207166|gb|EEG89520.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
Length = 446
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 24/153 (15%)
Query: 67 LNILPEERED---PIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVG 119
L+ P ER D + D ++ P+ HR LK+ C +C +C V
Sbjct: 116 LSDSPMERGDVRLTMKDVDYLPVTD-THRMVTTGGHFAYLKIAEGCDKHCTYCII-PKVR 173
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYI 172
+V E A + E+I G D + KRL ++L+ L I
Sbjct: 174 GDFRSVPMEHLLEEAQN--LADGGVKELILVAQETTMYGTD--LYGEKRLPQLLRALCKI 229
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ +R P+ I ELIQ +KE K
Sbjct: 230 SGLRWIRI----LYCYPEEITDELIQVIKEEPK 258
>gi|227829999|ref|YP_002831778.1| radical SAM protein [Sulfolobus islandicus L.S.2.15]
gi|229582731|ref|YP_002841130.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
gi|227456446|gb|ACP35133.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15]
gi|228013447|gb|ACP49208.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
Length = 394
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
>gi|46581412|ref|YP_012220.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450834|gb|AAS97480.1| radical SAM domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235069|gb|ADP87923.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
Length = 327
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147
P + L+L + C + C FC M G+ + + + +A + + + +I V
Sbjct: 7 PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
G+P++ ++ L+ L +L I H + F+S
Sbjct: 67 GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98
>gi|322806672|emb|CBZ04241.1| ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
[Clostridium botulinum H04402 065]
Length = 445
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + ++ V+ +R P+
Sbjct: 185 ENLAKQ-GVREIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITKELIEEIKNNDK 254
>gi|307730551|ref|YP_003907775.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1003]
gi|307585086|gb|ADN58484.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1003]
Length = 369
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 77 PIGDNNHSPL--------KGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ--- 121
P+ D + +P+ G++H R L + + C C +C R +
Sbjct: 7 PVADLSAAPVISGPLQTPSGVLHDTLARPLRDLRISVTDRCNFRCVYCMPRAIFDKDYAF 66
Query: 122 --KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+LS ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 67 LPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPLL--RKNLEFLIERLAQL 116
>gi|2226152|emb|CAA74441.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
Length = 346
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 15/153 (9%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQ 139
+ + + + + CP C +C + + S + +++
Sbjct: 6 VPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLK 65
Query: 140 EKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELI 197
E ++ + F GG P ++ + + + + + R V+ +R + V P I E +
Sbjct: 66 EHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRPDTITEEKL 124
Query: 198 QCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
L + + I P + E + AI R
Sbjct: 125 AVLNKYDIDRISIN-----PQSYENETLKAIGR 152
>gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
nitrofigilis DSM 7299]
Length = 482
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 58/218 (26%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEK-SQ 143
H++ RI + + C + C +C R+ E LS +D + Y+ Q
Sbjct: 32 AHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSAKLSPEDAVKKVLYVGGDIQQ 91
Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTL--RYIKHVQ 176
+ V G GD L K RL + + + HV
Sbjct: 92 LSVVGIAGPGDALANPKKTFDTFRMLHEKAPDQKLCLSTNGLRLPDYVDEMVKYNVDHV- 150
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--------AIS 228
+ +S VDP E G +Y +H NH F E I
Sbjct: 151 TVTINS----VDPT----------GEIGAKIYPWVHWNHEKVFGAEGAKILLEQQLKGIK 196
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
L GI++ + SVL+ G+ND + L N+ + EL +
Sbjct: 197 MLTERGILVKANSVLIPGVND--KELVNVAKKLKELNV 232
>gi|284039515|ref|YP_003389445.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM
74]
gi|283818808|gb|ADB40646.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM
74]
Length = 326
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 25/218 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C E + K VL+ ++ E + + + +V TGG+P +
Sbjct: 15 LAVTDRCNLRCFYCMPEEGIKYLPKHQVLTYEEMERLVRVLAR-LGVQKVRITGGEPFV- 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI------ 211
L L L I + + + + P + L + +
Sbjct: 73 -RAGLMDFLHRLAEIDGLNDISLTTNGVLTAPH---IPALAALGVKSVNLSLDTLDRERF 128
Query: 212 -HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF-VELRIKP 268
E + + L AGI +V++ G N D L + RT V++R
Sbjct: 129 YKITRRDEL-PAVLKTLDALLEAGIQTKINAVVMDGQNTQDLVPLTEMTRTMPVDVR--- 184
Query: 269 YYLHHPDLA--AGTSHFRLTIEEGQKIVASLKEKISGL 304
++ SH+ + ++I+ ++ L
Sbjct: 185 ---FIEEMPFNGEGSHYPVLNWTHRRIIDEIRAHFPDL 219
>gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
Length = 437
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ +D + + +RY DR L + L H C C
Sbjct: 27 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 86
Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
+C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L
Sbjct: 87 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 143
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L LK L V+ F + + + +++ L++AG
Sbjct: 144 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 182
>gi|210621258|ref|ZP_03292564.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
gi|210154869|gb|EEA85875.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
Length = 349
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 55/254 (21%)
Query: 43 IANLINPHNPNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRI- 97
+ NLI+ N Q + KEE L I ++ D + + I Y R+
Sbjct: 1 MKNLIDKLEKN-----QIL-SKEEFVRLLAISEKDDIDYLTERAKCVRDDI---YGKRVF 51
Query: 98 ---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
L+++ + C C +C R + + LS + + E V+ G D
Sbjct: 52 IRGLIEISNYCKNDCYYCGIRRSNKNAQRYRLSKEQILSCCENGYELGFRTFVMQGGEDA 111
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVP---IVDP--QRINPELIQCLKEAGKPVYI 209
+ ++ +++ R P + +R + +KEAG Y+
Sbjct: 112 FF-KDDVVCDIVSSIKE-----------RYPDCAVTLSLGERSTESY-RKMKEAGADRYL 158
Query: 210 -------AIHAN--HPYEFSEEAIAAISRLANA-------GIILLS--QSVLLKGINDDP 251
IH N HP E E R A GI++ S Q+ L+ I +D
Sbjct: 159 LRHETFDNIHYNKLHPVELDPENRKRCLRDLKALRYQTGTGIMVGSPYQT--LENIAEDL 216
Query: 252 EILANLMRTFVELR 265
+ L + +
Sbjct: 217 LFIKELNPEMIGIG 230
>gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2]
gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 454
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ +D + + +RY DR L + L H C C
Sbjct: 44 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103
Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
+C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L
Sbjct: 104 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 160
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L LK L V+ F + + + +++ L++AG
Sbjct: 161 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199
>gi|18977826|ref|NP_579183.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638]
gi|18893579|gb|AAL81578.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638]
Length = 588
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 54/249 (21%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--W 145
HR +L + L + C + C +CF + V + + L ++++ I
Sbjct: 136 HRSHTNLLNIVLTNRCNLSCWYCF---FYAREGEPVYEPTLEQIRMMLRNAKKENPIGAN 192
Query: 146 EVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCL 200
V FTGG+P L ++ + + HVQ+ +R PEL++ +
Sbjct: 193 AVQFTGGEP-TLRDDLIEIIKIAKEEGYDHVQLNTDGIRLA----------FEPELVKKI 241
Query: 201 KEAGKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
+EAG + NH E + + GI+L+ L++ +ND
Sbjct: 242 REAGVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDHE 297
Query: 252 E---ILANLMRTFVELRIKPYYLHHP------DLAAGTSHFRLTIEEGQ-KIVASLKEKI 301
I L + + P FR+TI KI I
Sbjct: 298 AGAIINFGLNHLDIVRGVN----FQPISLVGRVPKKERQRFRITIAGAIKKIEEQTNGAI 353
Query: 302 S---GLCQP 307
S P
Sbjct: 354 SRDDWYPIP 362
>gi|302875219|ref|YP_003843852.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307688900|ref|ZP_07631346.1| biotin synthase [Clostridium cellulovorans 743B]
gi|302578076|gb|ADL52088.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 346
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 76 DPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
D + S + +Y R LL+ +VC C +C R + + LS +
Sbjct: 26 DQYDEELFSAANRVTEKYLGNQVELRGLLEFTNVCKRNCLYCGLRRENNNIERYRLSKEQ 85
Query: 131 T----EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIK 173
+ A++Y ++ GG D + +RL +++K ++ +
Sbjct: 86 ILDFSKKAVSY-----GYNTIVLQGGEDDYFTV--ERLSEIIKEIKQLD 127
>gi|198277605|ref|ZP_03210136.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
gi|198270103|gb|EDY94373.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
Length = 153
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C+ C E + G L+ + E + I + V F+GGDP + L
Sbjct: 26 GCAHRCKGCHNPESWNPKAGKPLTQEVLEQIIQEINANPLLDGVTFSGGDPFYNPEEFL 84
>gi|323692752|ref|ZP_08106980.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
WAL-14673]
gi|323503194|gb|EGB19028.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
WAL-14673]
Length = 436
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 23/132 (17%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + G V+ + AA Y E++
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194
Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
T G D + L ++ L I+ ++ +R S ++P+ I E + L
Sbjct: 195 TGIHLSSYGVDFSEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSALAG 250
Query: 203 AGKPVYIAIHAN 214
K + H +
Sbjct: 251 L-KSICPHFHLS 261
>gi|297531012|ref|YP_003672287.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
gi|297254264|gb|ADI27710.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
Length = 341
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C E+ G + +L+ ++ A LA + + ++ TGG+
Sbjct: 22 LSVTDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L +++ L + ++ +
Sbjct: 81 PLLRRD--LDALIERLSALPGLRDI 103
>gi|283780939|ref|YP_003371694.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
gi|283439392|gb|ADB17834.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
Length = 465
Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 25/154 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C C FC +M G K ++ + VI
Sbjct: 164 AYLKISEGCDRLCTFCAIPKMRG--KHATKPMEEVLKEARQLAADGVKELVIVAQDTTYY 221
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + RL ++L+ + ++ +Q +R P I ELI + ++ K V YI
Sbjct: 222 GID--LYGEPRLAELLREIEKVEGIQWIRL----MYFYPMYITDELIDVIAKSEKIVPYI 275
Query: 210 AI---HANH------PYEFS-EEAIAAISRLANA 233
+ H N + E I +L A
Sbjct: 276 DMPLQHINDTMLRRMSRRVTRAETELQIKKLREA 309
>gi|282860156|ref|ZP_06269231.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
gi|282587045|gb|EFB92275.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
Length = 451
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S K E A+A E++ TG
Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVKQAEEAVA-----EGGREIVLTG 212
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + + ++K L ++ ++ R S ++P I+ ELI +
Sbjct: 213 VNIGDFGRTTSESFLDLVKALDKVEGIERYRISS----LEPDLIDDELIAYCATSKH--- 265
Query: 209 IAIHA 213
H
Sbjct: 266 FMPHF 270
>gi|269139692|ref|YP_003296393.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
EIB202]
gi|267985353|gb|ACY85182.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
EIB202]
gi|304559561|gb|ADM42225.1| Molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
FL6-60]
Length = 328
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 55/259 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + VC C +C LS + +V TGG+P +
Sbjct: 17 LSVTDVCNFRCTYCLPDGYRPDSHAAKRFLSRDEIRRISHAFAALGT-EKVRLTGGEPTL 75
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
++ +R ++ L + R+ ++ ++AG I + +
Sbjct: 76 RRD--FCDIVAAVRENPAIRTL-----AVTTNGYRMARDVGAW-RDAGLT-AINVSVDSL 126
Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
H + E A I +AG + +VL++G+ND +L
Sbjct: 127 DARQFHA--ITGEDRFAQVMAGIDAAFDAGFERIKVNTVLMRGVND-----GSLKAFLHW 179
Query: 264 LRIKPYYLHHPDLAA------GTSHFR---LTIE--EGQKIVASLKEKISGLCQPFYILD 312
+R +P G+ FR ++ Q + A + ++ G
Sbjct: 180 IRRRP---IQMRFIELMETGDGSELFRRHHVSGATIRAQLLAAGWQRRLPGR-------- 228
Query: 313 LPGGYGKVKIDTHNIKKVG 331
G +V + +VG
Sbjct: 229 -SDGPAQVFWHPDYLGEVG 246
>gi|319793190|ref|YP_004154830.1| molybdenum cofactor biosynthesis protein a [Variovorax paradoxus
EPS]
gi|315595653|gb|ADU36719.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
EPS]
Length = 386
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 12/97 (12%)
Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL 135
P G++ R L + + C C +C F ++ +LS ++
Sbjct: 31 PATGLLRDRLGRPLTDLRISVTDRCNFRCSYCMPKDVFDKDYKYLPHSALLSFEEMTRLA 90
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ ++ TGG+PL+ K ++ +++ L I
Sbjct: 91 RLFAAH-GVRKIRLTGGEPLL--RKNIEALIEQLAEI 124
>gi|257094392|ref|YP_003168033.1| Radical SAM domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046916|gb|ACV36104.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 332
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ R + + + L + C C C G Q+ ++++ +A LA+I ++
Sbjct: 14 PALTRRSVETVQVNLGYRCNQSCLHCHVNA--GPQRKEEMTAETIDALLAFIAASPEVKV 71
Query: 147 VIFTGGDP-LILSHKRL 162
+ TGG P L + +RL
Sbjct: 72 LDLTGGAPELNPNFRRL 88
>gi|124009850|ref|ZP_01694518.1| radical SAM domain protein [Microscilla marina ATCC 23134]
gi|123984171|gb|EAY24532.1| radical SAM domain protein [Microscilla marina ATCC 23134]
Length = 310
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 28/166 (16%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + +C C C+ + KG +S ++ + + +I +I +GG+P
Sbjct: 9 ESVYWVFTQLCNDQCAHCY---NLSGPKGAKMSEEECMQIIENLP--PKIDRIILSGGEP 63
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF--HSR-VPIVDPQRINPELIQCLKEAGKPVYIAI 211
L ++L +L L+ R+ H++ + + + E++ L G +
Sbjct: 64 L-AERQKLYAILDRLKQ-------RYPAHTQLMLQTNGDLLTEEILDTLIAKGVTRFDIA 115
Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILAN 256
F + A A ++ LA+ +G+N DD + L +
Sbjct: 116 SI---DRFHKNAGARLTELADMFAS--------RGVNGDDKDPLVD 150
>gi|317152637|ref|YP_004120685.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
aespoeensis Aspo-2]
gi|316942888|gb|ADU61939.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
aespoeensis Aspo-2]
Length = 333
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 89/255 (34%), Gaps = 47/255 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C +L ++ + + + + + FTGG+P +
Sbjct: 18 ISVTDRCNLRCTYCAGEGQEFVPHSDILRYEEILELMD-MATRLGMVKFRFTGGEPFV-R 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
++ V + + + E + L +G + V I++ P
Sbjct: 76 KGFADFLIAAAARFPGVDMC-------VTTNATLIGEHVDRLASSGVRRVNISLDTLDPE 128
Query: 218 EFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267
+F + A I R +AG+++ +V +KGIND P + +++R
Sbjct: 129 KFHRVTGFDKYDVVRANIDRCLDAGMVVKVNAVAMKGINDGELPGFIEFARSRPLDMR-- 186
Query: 268 PYYLHHPDLAAGTS-----HFRLTIEEGQKIVASL-----------KEKISGLCQPFYIL 311
+ G H ++ + + I+A + + G P
Sbjct: 187 ----FIEFMPVGLETGWSDH---SVWKAEDILAQASALAELVPSGGEGNVPG--GPARTF 237
Query: 312 DLPGGYGKVKIDTHN 326
D+ GG G++ + +
Sbjct: 238 DIVGGQGRIGVISPY 252
>gi|153812695|ref|ZP_01965363.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
gi|149831211|gb|EDM86300.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
Length = 419
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C +C +C R + + VL +T AA Y EV+ TG
Sbjct: 124 RAYIKVQDGCNQFCTYCIIPFARGRVRSRKIEDVLREVETLAAKGY-------KEVVLTG 176
Query: 152 GDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
LS + L +++ + ++ + +R S ++P+ I E ++ +
Sbjct: 177 I---HLSSYGVDFPKEERESLLSLIQAVSRVEGISRIRLGS----LEPRIITEEFLEGIV 229
Query: 202 EAGKPVYIAIHA 213
+ GK + H
Sbjct: 230 KTGK---VCPHF 238
>gi|56421035|ref|YP_148353.1| hypothetical protein GK2500 [Geobacillus kaustophilus HTA426]
gi|261418482|ref|YP_003252164.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
gi|319767557|ref|YP_004133058.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
gi|56380877|dbj|BAD76785.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261374939|gb|ACX77682.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
gi|317112423|gb|ADU94915.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
Length = 449
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L +L+ L + ++ LR S ++ +I E+I LK + K
Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLKRLRISS----IEASQITDEVIDVLKRSEK 251
Query: 206 PVYIAIHA 213
+ +H
Sbjct: 252 -IVRHLHI 258
>gi|326407736|gb|ADZ64807.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis CV56]
Length = 707
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 28/184 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C+FC+ + +G L + L I + + V GG+P
Sbjct: 13 WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTHVSLLGGEP--TE 65
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216
+ + ++ L LR S + Q++ N ELI+ L ++ + I P
Sbjct: 66 CEYFEHIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118
Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264
+ +A+ +++ L + V+ K N + + ++ T EL
Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178
Query: 265 RIKP 268
R+ P
Sbjct: 179 RLMP 182
>gi|227486728|ref|ZP_03917044.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
51172]
gi|227235316|gb|EEI85331.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
51172]
Length = 432
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +YC +C G+ + S K+ E ++ E++ TG
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNVVSRPMDSIVKEAERL-----AENGFKEIVLTGI 196
Query: 153 DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L V++ + + ++ +R S ++P+ I + ++ +K K
Sbjct: 197 HVASYGKDFKDGISLIDVIENVAKVDGIKRIRLSS----MEPRHITRDFLERMKATKK 250
>gi|170041251|ref|XP_001848384.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
gi|167864830|gb|EDS28213.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
Length = 553
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 33/207 (15%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQ 139
SPL R+ + + L C + C++C E V + K ++L++ + LA +
Sbjct: 27 EEASPLTDKFGRFHSYLRISLTERCNLRCKYCMPEEGVPLTAKDSLLTTDEVLR-LAGLF 85
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ + ++ TGG+P + L ++ L+ I ++ + + + + +L+
Sbjct: 86 VREGVRKIRLTGGEPTVRKD--LTDIVAALKRIPSLESVGITTNGLM-----LTRQLVGL 138
Query: 200 LKEA--GKPVYIAIHANHPYEFSEEAIAAISRLAN-----AGIILLSQ--------SVLL 244
+ G + + I+R AGI L Q VL+
Sbjct: 139 QRAGLDGLNISLDT-------LKAAKYERITRRKGWERVIAGIDLAIQLGYKPKVNCVLM 191
Query: 245 KGINDDP--EILANLMRTFVELRIKPY 269
KG NDD + + V++R Y
Sbjct: 192 KGFNDDELCDFVEMTRDRCVDIRFIEY 218
>gi|115351039|ref|YP_772878.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
AMMD]
gi|115281027|gb|ABI86544.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
Length = 370
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|256751948|ref|ZP_05492818.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749153|gb|EEU62187.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 333
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++L + C + C +C+++ ++GS+ +L K + + + + VI GG+PL+
Sbjct: 24 IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 81
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ ++ +K V IL + + P+ I +L + + V I++
Sbjct: 82 -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 129
>gi|167630039|ref|YP_001680538.1| radical sam [Heliobacterium modesticaldum Ice1]
gi|167592779|gb|ABZ84527.1| radical sam [Heliobacterium modesticaldum Ice1]
Length = 331
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C ++C C+R G + L++++ + L I + + +IF+GG+PL+
Sbjct: 7 TTNQCNMFCDHCYRDA--GVKADQELNTQEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ L + LR F + + I EL + LK+AG
Sbjct: 63 -----IVELVAYATSKGLRSVFGTNGTL-----ITRELARDLKKAG 98
>gi|146297144|ref|YP_001180915.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|238065313|sp|A4XLD9|RIMO_CALS8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|145410720|gb|ABP67724.1| SSU ribosomal protein S12P methylthiotransferase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 440
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 12/116 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
+K+ C C +C + G+ + D + E E++ T D
Sbjct: 148 AYIKIAEGCNNRCSYCSIPLIRGNYTSRYI--DDIIQEARKLSED-GYKEIVLTAQDTTK 204
Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
I K L +L+ L I +++ +RF P+ I+ EL+ +K K V
Sbjct: 205 YGIDIYQKKMLATLLQKLSEIDNIKWIRF----LYSYPEDIDDELLNIVKSLPKVV 256
>gi|291550415|emb|CBL26677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus torques
L2-14]
Length = 482
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWE 146
+ +YP + + ++ C +C +C + G ++ + ++ E +A + E
Sbjct: 183 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREPKAIIREIERLVA-----DGVVE 237
Query: 147 VIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
V+ G + + K L++ +L+ + I+ ++ +RF + P+ ++ ELI+ +
Sbjct: 238 VMLLGQN-VNSYGKNLEEPMTFAQLLQEIEKIEGLERIRFMTSH----PKDLSDELIEVM 292
Query: 201 KEAGKPVYIAIH 212
++ K + +H
Sbjct: 293 SKS-KKICKHLH 303
>gi|120601419|ref|YP_965819.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561648|gb|ABM27392.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
Length = 317
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149
+P R+ L+L + C C C R G D + AL I + +F
Sbjct: 33 FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 89
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G+PL+ R+ ++L L + S+ + P + L + +
Sbjct: 90 HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 147
Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
A + + RLA+ L Q L+ + + E+
Sbjct: 148 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 200
>gi|172060044|ref|YP_001807696.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
gi|171992561|gb|ACB63480.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MC40-6]
Length = 370
Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|331091338|ref|ZP_08340178.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404499|gb|EGG84043.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
2_1_46FAA]
Length = 449
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C +C +C R + +K V++ A Y EV+
Sbjct: 162 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSREKENVVAEVKQLVANGY-------QEVVL 214
Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
T G D L + L ++ + I+ ++ +R S ++P+ I E + +
Sbjct: 215 TGIHLSSYGVD---LQGEDLLSLILAVNEIEGLKRIRLGS----LEPRIITEEFAKTISG 267
Query: 203 AGKPVYIAIHA 213
K I H
Sbjct: 268 LEK---ICPHF 275
>gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVI 148
+ + + C + C+FC+ M + +++ E A+ Y + E I V+
Sbjct: 179 RNTVCVSSQVGCAMNCQFCYTGRM--GLTRHLTAAEIVEQAV-YARRLFSSEVGSITNVV 235
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
F G G+P ++ V+K + H Q L F R V + P+L L+E+ +
Sbjct: 236 FMGMGEPF----HNIESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESNCAL 291
Query: 208 YIAIHANHPYEFSEEAIAAISRL-ANAGIILLSQS-----------------VLLKGIND 249
++++A ++E + + + LL Q+ V+L G+ND
Sbjct: 292 AVSLNAT-----TDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVND 346
Query: 250 DPEILANL 257
E L
Sbjct: 347 SLEDARRL 354
>gi|209521138|ref|ZP_03269865.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
gi|209498413|gb|EDZ98541.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
Length = 382
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +LS ++ E + ++ TGG+
Sbjct: 54 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQLFVAH-GVEKIRLTGGE 112
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 113 PLL--RKNLEFLIERLARL 129
>gi|282853150|ref|ZP_06262487.1| radical SAM domain protein [Propionibacterium acnes J139]
gi|282582603|gb|EFB87983.1| radical SAM domain protein [Propionibacterium acnes J139]
Length = 364
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY ++L C + C +C+RR+ G + ++ + ++ + V G
Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAG 60
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P L ++ V K + I+ ++ + + R++ ++I LK V +++
Sbjct: 61 GEP-TLVPSLIEHVAKRVVEIRWEKV----TCGIQTNAARLDGDIIAMLKRHSVRVGVSV 115
Query: 212 HANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
P +E + + A + LA+A I + +VL
Sbjct: 116 DGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152
>gi|150021064|ref|YP_001306418.1| radical SAM domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149793585|gb|ABR31033.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
Length = 314
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 15/112 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ C C FC + M G + + D + + E+ F GG
Sbjct: 5 IFLPNAGCKNRCIFCNQYSMTG---EKMPTKSDILKIID---KYPIKNEIAFYGG---TF 55
Query: 158 SHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ ++K ++ L +K + + +R +R P I E + LK+
Sbjct: 56 TGLSIKKQIEILESVKFLNLPIRISTR-----PDEITEENLHILKKYNVKTI 102
>gi|167752159|ref|ZP_02424286.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
gi|167660400|gb|EDS04530.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
Length = 433
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 13/141 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G+ + ++ D I Q E++ TG
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGASRNMPIA--DLVKEAEQIAAAGQ-REIVITGIN 198
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + +R +L+ L ++ ++ R S ++P + E+I + K
Sbjct: 199 TGDFGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCASSPK---FQ 251
Query: 211 IHANHPYEFSEEAIAAISRLA 231
H + P + +++ A R
Sbjct: 252 HHFHIPLQSGSDSVLARMRRR 272
>gi|160933141|ref|ZP_02080530.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753]
gi|156868215|gb|EDO61587.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753]
Length = 424
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIFTGGDP 154
LK+ C +C +C + G + + + E + ++E I + G D
Sbjct: 129 LKIAEGCDNHCTYCAIPLIRGGYRSRKMEDILAEAEKLAQWGVKELMVIAQDTTRYGED- 187
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
+ +L ++L L ++ ++ +R V P+RI EL++ + + K + Y+ +
Sbjct: 188 -LYGEGKLPQLLTELCKVEGLRWIR----VLYCYPERITDELLEVMAKEDKILKYMDLPL 242
Query: 214 NHPYEFSEEAIAAISR 229
H S + + A++R
Sbjct: 243 QH---CSRQVLRAMNR 255
>gi|302325942|gb|ADL25143.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 336
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + + C + C+ C++ G K L++ + + I + + +IF+GG
Sbjct: 5 YGMIVSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGG 61
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+P+ + L + LR F + + I +L LKEAG
Sbjct: 62 EPMTRPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 104
>gi|227498447|ref|ZP_03928593.1| predicted protein [Acidaminococcus sp. D21]
gi|226903905|gb|EEH89823.1| predicted protein [Acidaminococcus sp. D21]
Length = 369
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGG 152
+ I L L + C + CR+C + +V ++ + E E + F GG
Sbjct: 10 NTIFLMLGNGCNMNCRYCLQHPLVEKSLSGHVNPDVYRFIRQVVDENDDKTELGLHFYGG 69
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+PLI +++++ L+ V+ +RF + I + + I E+++ V I+
Sbjct: 70 EPLI-YFPLMKEIIGKLKD---VKGIRFST---ISNGKAITDEMVELFNSLPLYVCIS 120
>gi|73541963|ref|YP_296483.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha
JMP134]
gi|72119376|gb|AAZ61639.1| GTP cyclohydrolase subunit MoaA [Ralstonia eutropha JMP134]
Length = 396
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 83/260 (31%), Gaps = 55/260 (21%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ D R P E + P + D PL + + + C C
Sbjct: 32 DLRDHRYRSMTPSIPETLVEPSGL---VADTRARPLHDLR--------ISVTDRCNFRCV 80
Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+C +E+ +LS ++ E + ++ TGG+PL+ K ++K+
Sbjct: 81 YCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVS-LGVEKIRLTGGEPLL--RKNIEKL 137
Query: 166 LKTLRYIKHV--------------------QILR-FHSRVPIVDPQRINPELIQCLKEAG 204
++ L I V Q LR R V I+ + + +
Sbjct: 138 VEMLARIDTVSGKPLDLTLTTNASLLARKAQSLRDAGLRRVSVSLDAIDDVTFRRMNDVD 197
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
V +H E A+ + V+ +G ND + + R F
Sbjct: 198 FAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND--AEIVPMARHFRGS 243
Query: 265 RIKPYYLHHPDLAAGTSHFR 284
I Y+ D ++H++
Sbjct: 244 GIIVRYIEFMD-VGASNHWQ 262
>gi|256831301|ref|YP_003160028.1| Radical SAM domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256684832|gb|ACV07725.1| Radical SAM domain protein [Jonesia denitrificans DSM 20603]
Length = 386
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 81 NNHSPLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
+ H ++ + H DR + ++ C + C+ C R + + L+++ +A L
Sbjct: 5 DEHRSVRRLHHDAGDRPMITIWEVTRACALVCQHC-RADAQHRRNPRELTTEQGKALLDN 63
Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
I + + V+ TGGDP L L H Q L P V P ++ P+
Sbjct: 64 IASFGKPFPIVVMTGGDPFERDD------LAELVAHGHAQGLHMAL-SPSVTP-KMTPQR 115
Query: 197 IQCLKEAG 204
++ L+ AG
Sbjct: 116 LRELRAAG 123
>gi|51244049|ref|YP_063933.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54]
gi|50875086|emb|CAG34926.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54]
Length = 312
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 39/178 (21%)
Query: 104 VCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSH 159
VC + C +C + G +K V K E L Y + F+G G+P LS
Sbjct: 27 VCSLDCIYCESGRTTVLTGERKEYVSHEKVKEELLDYFANNPDPDYITFSGSGEP-TLS- 84
Query: 160 KRLQKVLKTLRYI----KHVQ--ILRFHS--RVPIVDPQRINPELI---------QCLKE 202
++ T+ +I +V+ +L + P V + + +L+ +
Sbjct: 85 ---SRIGDTIEFIKAQKPNVKVAVLTNGTLFSNPAVRRELMGADLVIPSLDAATWDSFRR 141
Query: 203 AGKPVY---IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+P+ + H F EE + + +L +L G+NDD E LA L
Sbjct: 142 INRPLATLDLDTHIEGIRLFKEEFSGKMD------LEIL----ILPGVNDDEESLAAL 189
>gi|323486941|ref|ZP_08092256.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
WAL-14163]
gi|323399713|gb|EGA92096.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
WAL-14163]
Length = 503
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+YP + + ++ C +C +C + G ++ + +D + + S + E++
Sbjct: 197 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 253
Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K +
Sbjct: 254 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 308
Query: 204 GKPVYIAIH 212
K + +H
Sbjct: 309 RK-ICRHLH 316
>gi|269126500|ref|YP_003299870.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
DSM 43183]
gi|268311458|gb|ACY97832.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
DSM 43183]
Length = 329
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 45/249 (18%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C E + K +L+ + +A + I EV +TGG+PL+
Sbjct: 15 VSLTDRCNLRCTYCMPPEGLPWLPKPQLLTDDEVVRLVAIGVRRLGITEVRYTGGEPLL- 73
Query: 158 SHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQ-------RINPELIQCLKEAGK 205
+ L ++++ LR + + R P R+N L +
Sbjct: 74 -RRGLVEIVRRTAELRPRPQISLTTNGIGLRRLA--PALAEAGLDRVNVSLDTLDAGLFR 130
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
+ H + +A + AG+ + +VL++G+ND + L+R +E
Sbjct: 131 RLA------HRDRL-ADVLAGLEAAHRAGLHPVKVNAVLMRGVNDHEAV--PLLRFCLER 181
Query: 265 RIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKE---------KISGLCQP--FYIL 311
+ + H R + ++I+A L + G P +++
Sbjct: 182 GYQ--LRFIEQMPLDAQHGWRRAQMVTAEEILAELSREFELTPEDPRTRGSA-PAETFLV 238
Query: 312 DLPGGYGKV 320
D GG G+V
Sbjct: 239 D--GGPGRV 245
>gi|257466298|ref|ZP_05630609.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
gonidiaformans ATCC 25563]
gi|315917455|ref|ZP_07913695.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691330|gb|EFS28165.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 348
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148
R+ + + CP +C FC ++++ G + + +D + Y++ EV
Sbjct: 2 RHYNIPIFISHFGCPNHCVFCNQKKINGQETDIQV--EDIHRIVKEYLKTLPKKSEKEVA 59
Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG LS + ++ L+ L YI+ +Q +R +R P I ++++ L++ G
Sbjct: 60 FFGGTFTGLSMELQREYLEALQEYIERGDIQGIRLSTR-----PDYIQKDILEQLRKYG 113
>gi|254518626|ref|ZP_05130682.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
7_2_43FAA]
gi|226912375|gb|EEH97576.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
7_2_43FAA]
Length = 323
Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 99 LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +K L++ + + K I +V FTGG+PL+
Sbjct: 14 ISLTDNCNLRCIYCMEEKNNTFLKKEDKLTNDEIYKIVCE-SAKLGIKKVRFTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ ++++ + I+ ++ + + + E ++ L +AG K V I++ +
Sbjct: 73 KD--IVELMQRINTIQGIEEIYLTTNGI------LLEENVEILAKAGLKGVNISLDSLKK 124
Query: 214 NHPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250
+ +AAI + + GI + +V+++ INDD
Sbjct: 125 ETFKRLTRLGDLNKVLAAIDKCISLGIKVKLNTVMIEDINDD 166
>gi|323691989|ref|ZP_08106237.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
WAL-14673]
gi|323503912|gb|EGB19726.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
WAL-14673]
Length = 500
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+YP + + ++ C +C +C + G ++ + +D + + S + E++
Sbjct: 194 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 250
Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K +
Sbjct: 251 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 305
Query: 204 GKPVYIAIH 212
K + +H
Sbjct: 306 RK-ICRHLH 313
>gi|167769111|ref|ZP_02441164.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
17241]
gi|167668751|gb|EDS12881.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
17241]
Length = 441
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 25/159 (15%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----FRREMVG 119
E+ G+ L+G +R+L LK+ C C +C R
Sbjct: 120 GEKTVAFGEKEALSLEG------ERVLANEPYFAYLKVAEGCDNRCSYCAIPLIRGPFRS 173
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+++ AA + + G D + L ++L+ L + V+ +R
Sbjct: 174 RPMENIVAEAQRLAACGVTELNVVAQDTTRYGED--LYGRLALPELLEKLCRLDGVRWVR 231
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217
+ P RI L+ + K V Y+ I H
Sbjct: 232 ----MLYCYPDRITDRLLDVMAREEKIVKYMDIPIQHVN 266
>gi|220927786|ref|YP_002504695.1| radical SAM protein [Clostridium cellulolyticum H10]
gi|219998114|gb|ACL74715.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
Length = 468
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 72 EEREDPIGDNN-HSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTV 125
+D I + H K I H R+ +L++ C + C +C + G
Sbjct: 57 GYLKDSILEEIVHPETKYIKHHLDHRVQFLILQVTQSCNLRCNYCTYSGNYTNRVHSGKS 116
Query: 126 LSSKDTEAALAYIQEK-SQIWEVIFT--GGDPLI 156
+S + + ++ Y+ + ++I +V + GG+PL+
Sbjct: 117 MSWELAKKSIDYLYDHSNEIEKVRISFYGGEPLL 150
>gi|325290900|ref|YP_004267081.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966301|gb|ADY57080.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 296
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 80/239 (33%), Gaps = 39/239 (16%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
H+Y RI L + C + C+FC R G + K E ++ +I
Sbjct: 28 HKY-GRIHLPVSPRCNIQCKFCKRSLNKFENRPGVAGSILTPEKALEVVDKALELCPEIT 86
Query: 146 EVIFTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVD 188
V G GD L + L L ++V +I++ + V
Sbjct: 87 VVGIAGPGDTL-ATPHALDTFQLVHEKYPDLIKCLSTNGLLLRENVNRIVKAGVKTVTVT 145
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA----ISRLANAGIILLSQSVLL 244
++PE LK ++ + E + + A I +++ GI++ +VL+
Sbjct: 146 VNAVDPE---ILKNICSYIFYNGQLINGKEAALWLLEAQLAGIKKISERGIVVKINTVLI 202
Query: 245 KGINDD--PEILANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
IN+ E+ + I P S FR+ E + E+
Sbjct: 203 PEINNGHVGEVARVTSAAGASTINIIP-----LIPQNEMSDFRVPNCEELNVEREAAER 256
>gi|257438968|ref|ZP_05614723.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
gi|257198553|gb|EEU96837.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
Length = 487
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + A+ ++ E S EV F GG+PL
Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGERALMSFEVGKRAMDFLIENSGSRRNLEVDFFGGEPL 166
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ K+L + I H + RF + I+ ++I + V +++
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220
>gi|237741210|ref|ZP_04571691.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 4_1_13]
gi|256846346|ref|ZP_05551803.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 3_1_36A2]
gi|229430742|gb|EEO40954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 4_1_13]
gi|256718115|gb|EEU31671.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. 3_1_36A2]
Length = 348
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG +S ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|160942971|ref|ZP_02090209.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
M21/2]
gi|158445665|gb|EDP22668.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
M21/2]
Length = 431
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C C +C G + + + A L + + EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L ++++ + ++ +R S +DP + PE I L K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248
>gi|116749020|ref|YP_845707.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
MPOB]
gi|238066613|sp|A0LIM0|RIMO_SYNFM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|116698084|gb|ABK17272.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
MPOB]
Length = 444
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 10/118 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGT----VLSSKDTEAALAYIQEKSQIWEVIF 149
+K+ C C FC + G + +L A + +
Sbjct: 146 RSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDILREAHRLVACGAKELNIVAQDTTA 205
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G D L +L++L I+ ++ +R P RI PELI+ + ++ K V
Sbjct: 206 FGSD--RGEEHALVSLLESLEEIEKLEWVRL----LYAYPDRITPELIRTMSQSRKVV 257
>gi|34764314|ref|ZP_00145148.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27885914|gb|EAA23256.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 320
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG +S ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|295103489|emb|CBL01033.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii
SL3/3]
Length = 431
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C C +C G + + + A L + + EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L ++++ + ++ +R S +DP + PE I L K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248
>gi|237714068|ref|ZP_04544549.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D1]
gi|262407119|ref|ZP_06083668.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_22]
gi|294644009|ref|ZP_06721789.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CC 2a]
gi|294810385|ref|ZP_06769043.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides xylanisolvens SD CC 1b]
gi|229445892|gb|EEO51683.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D1]
gi|262355822|gb|EEZ04913.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. 2_1_22]
gi|292640646|gb|EFF58884.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides ovatus SD CC 2a]
gi|294442412|gb|EFG11221.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides xylanisolvens SD CC 1b]
Length = 152
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E G L+ + ++ + I+ + V F+GGDP L
Sbjct: 25 GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83
>gi|315058449|gb|ADT72778.1| MiaB family protein [Campylobacter jejuni subsp. jejuni S3]
Length = 416
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|289578146|ref|YP_003476773.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
gi|289527859|gb|ADD02211.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
Length = 304
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++L + C + C +C+++ ++GS+ +L K + + + + VI GG+PL+
Sbjct: 9 IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 66
Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ ++ +K V IL + + P+ I +L + + V I++
Sbjct: 67 -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 114
>gi|205356717|ref|ZP_03223478.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205345455|gb|EDZ32097.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 354
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 70 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 122
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA
Sbjct: 123 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 178
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 179 RHLHIALQHTSE 190
>gi|149914618|ref|ZP_01903148.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
gi|149811411|gb|EDM71246.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
Length = 317
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIF 149
P+ + +C + C C+ + + +++ + L Y+ + ++ I E+ F
Sbjct: 34 PETLWFNTGTLCNITCANCYIESSPTNDRLVYITA---DEVLDYLDQITERGWPIREIGF 90
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGG+P ++ + + L V IL R P++ + L+ K + +
Sbjct: 91 TGGEPF-MNPEMISMTRACLERGYEVLILTNAMR-PMMRKS-VKAGLLDLAKTWRDTLTL 147
Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIIL 237
I +H E + I + L +AGI +
Sbjct: 148 RISVDHWSEVRHDEERGKDAFKRTIEGMCWLRDAGIRM 185
>gi|57237831|ref|YP_179079.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221]
gi|88596372|ref|ZP_01099609.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
84-25]
gi|148926084|ref|ZP_01809770.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp.
jejuni CG8486]
gi|218562622|ref|YP_002344401.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|57166635|gb|AAW35414.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221]
gi|88191213|gb|EAQ95185.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360328|emb|CAL35124.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|145845563|gb|EDK22655.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp.
jejuni CG8486]
gi|284926236|gb|ADC28588.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928365|gb|EFV07680.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
Length = 416
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240
Query: 207 VYIAIHANHPYE 218
++ I H E
Sbjct: 241 RHLHIALQHTSE 252
>gi|253582208|ref|ZP_04859431.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835747|gb|EES64285.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 469
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + L+ ++ + +++ + G DP+ S
Sbjct: 87 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPINCS 146
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
L +L ++ I ++ R V+ E + LKE KP
Sbjct: 147 ---LDYILDCIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
Y +H N P E A+ R AGI
Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232
>gi|83721219|ref|YP_442241.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
gi|167619209|ref|ZP_02387840.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis Bt4]
gi|257138434|ref|ZP_05586696.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
gi|83655044|gb|ABC39107.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis E264]
Length = 370
Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K ++ +++ L + V
Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119
>gi|328954329|ref|YP_004371663.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454653|gb|AEB10482.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 511
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 29/190 (15%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
SP+ + RY + L + C + CR C+ +G L L QE
Sbjct: 206 SPIPSL--RYLE---LMITERCNLRCRHCY----LGEVGEAELPLDAVLQTLQEFQEMQG 256
Query: 144 IWEVIFTGGDPLILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ V+ +GG+PL+ + L L LRF V + + + ++I+ L+
Sbjct: 257 LR-VLLSGGEPLMHRHWQELNNHLPEFE-------LRF---VLLSNGLLLTDKVIEALRV 305
Query: 203 AGKPVYI-AIHANHPYEFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
+ + + H + + + L +AG + +++ +G + LA +
Sbjct: 306 HEVQLSLDGLEPGHDLLRGPGTWKKTVDRMQALQSAGFEVSVATMIHRG---NVAELAEM 362
Query: 258 MRTFVELRIK 267
R + ++
Sbjct: 363 SRWLQQAEVR 372
>gi|160873411|ref|YP_001552727.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS195]
gi|160858933|gb|ABX47467.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS195]
gi|315265640|gb|ADT92493.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS678]
Length = 337
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179
>gi|306821073|ref|ZP_07454691.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550909|gb|EFM38882.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 452
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 38/147 (25%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150
R +K+ C YC +C + + S++ + +Q + EV+ T
Sbjct: 142 KNTRAFVKIQDGCDRYCSYC-----IIPYTRGRIRSRNIGDIVKEVQSLSDNGYKEVVLT 196
Query: 151 G------------------------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
G D I L V++ + IK + +R S
Sbjct: 197 GIHIASYGKDLKKSKDKLIPIIHSQKDDFIQEDISLIDVIEEVSKIKDIHRVRIGS---- 252
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
V+P I+ + +Q L + K H
Sbjct: 253 VEPIIISDDFLQRLTKIEK---FCPHF 276
>gi|325681387|ref|ZP_08160913.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
albus 8]
gi|324106877|gb|EGC01167.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
albus 8]
Length = 443
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%)
Query: 79 GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
G P++G I+ P +K+ C C +C + G K +D
Sbjct: 128 GSKTDLPMEGGRIISTEPFYAYIKIAEGCSNNCTYCAIPAIRG--KFRSRKMEDILEEAR 185
Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
++ E V+ G D I +L ++L+ L I + +R P+
Sbjct: 186 WLAENGVTELVVIAQDTTRYGED--IYGKSKLPELLRELCKIDGFKWIR----TLYSYPE 239
Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
RI+ E I L K V YI + H + + + +++R
Sbjct: 240 RISEEFIDVLASEEKLVKYIDMPIQH---CNGDVLRSMNR 276
>gi|113868543|ref|YP_727032.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha H16]
gi|113527319|emb|CAJ93664.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16]
Length = 374
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ +LS ++ E + ++ TGG+
Sbjct: 47 ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 105
Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
PL+ K ++ +++ L I+ V + LR +RV +
Sbjct: 106 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 162
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
I+ + + + V +H E A+ + V+ +G ND
Sbjct: 163 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 208
Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284
+ + + R F I ++H++
Sbjct: 209 QEIVPMARHFRNSGII--LRFIEFMDVGASNHWQ 240
>gi|91774113|ref|YP_566805.1| molybdenum cofactor biosynthesis protein A [Methanococcoides
burtonii DSM 6242]
gi|91713128|gb|ABE53055.1| Molybdenum cofactor biosynthesis protein A [Methanococcoides
burtonii DSM 6242]
Length = 318
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + + C + C +C G + S T + + K + +V F+GG+PL+
Sbjct: 21 ISITNRCNLDCIYC---HSEGDEGSRKEMSAKTISVIVSAAAKFGVNKVKFSGGEPLVRK 77
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK------------- 205
+ +L+ L +K V + + +R LKEAG
Sbjct: 78 D--FEDILRKLPKLKDVSVTTNG----VFLKERAFS-----LKEAGLDRVNVSLDTLDPE 126
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMR 259
H + E + + I +AG+ + VLLKGIN D+ + +L+R
Sbjct: 127 KYAYITHGS--PETLHKVLEGIDAAISAGLTPVKLNMVLLKGINEDEIGDMLDLVR 180
>gi|310658985|ref|YP_003936706.1| hypothetical protein CLOST_1681 [Clostridium sticklandii DSM 519]
gi|308825763|emb|CBH21801.1| conserved protein of unknown function [Clostridium sticklandii]
Length = 442
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%)
Query: 66 ELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EL D D S + +Y LK+ C C +C ++ G +
Sbjct: 118 ELGENNSLILDINHDLKPDSKRSLLTEKY--TAFLKIAEGCDNLCTYCIIPKLRGKYRSR 175
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILR 179
L +D + S + E+I D L I + K L ++L+ L I+ + +R
Sbjct: 176 KL--EDIVKEAKVLAA-SGVKEIIVIAQDTTKYGLDIYNEKSLPRLLRELNAIEDLNWIR 232
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGK 205
F P+ I+ +LI +KE+ K
Sbjct: 233 F----LYSYPEDIDLDLILTVKESDK 254
>gi|300869794|ref|YP_003784665.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
95/1000]
gi|300687493|gb|ADK30164.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
95/1000]
Length = 265
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156
+ + C + C +C E G +K T E ++E ++ + +V TGG+PL+
Sbjct: 14 VSVTDRCNLRCVYCMPEE--GIEKKTHNEILSYEQIYNVVKESAELGVKKVRLTGGEPLV 71
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
K + +++ +R +K+++ + + I+ P + + LK+AG
Sbjct: 72 --RKNIDELVAMIRTLKNIETIAMTTNALILSP------IAERLKKAGL 112
>gi|297200519|ref|ZP_06917916.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
29083]
gi|297147672|gb|EFH28704.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
29083]
Length = 401
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 31/158 (19%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIW-----EVIF 149
LLK+ C + C +C+ E V + ++ A A I E ++ +V+
Sbjct: 8 LLKIHSRCNLACDYCYVYESVDQSWRDRPRTMAPGVVRRAAALIAEHAREHALSEVQVVL 67
Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203
GG+PL++ +RL VL+ L + V LR R+ +P L+ L
Sbjct: 68 HGGEPLLVGAERLDAVLRELAGALDGVAELRLNLQTNGLRLVE------DPALLPVLARH 121
Query: 204 GKPVYI------AIHANHPYE-----FSEEAIAAISRL 230
G V + A H H + A+ L
Sbjct: 122 GVRVGVSLDGTPATHDRHRRRPGGSGSHADVARALRLL 159
>gi|210612282|ref|ZP_03289230.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
gi|210151656|gb|EEA82663.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
Length = 440
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQI----WEVIFTG 151
LK+ C +C +C + +V + + A + + +I E G
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPIERLLKEAEDLVAQGVKEIILVAQETTLYG 204
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D + K L K+L+ L I ++ +R P+ I ELIQ +KE K
Sbjct: 205 KD--LYGEKSLHKLLRELCKISGLRWIRI----LYCYPEEITDELIQVIKEEDK 252
>gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
Length = 464
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 80 DNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
++ + P+ G + ++ L + H C + C +CF + ++S + + AL
Sbjct: 78 EDTYEPMAGQLKAKTSGVIKALCLHIAHTCNLNCSYCFASQGKYHGDRALMSFETGKRAL 137
Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQ 190
++ E S EV F GG+PL ++ +++++ R I+ + RF +
Sbjct: 138 DFLVENSGTRRNLEVDFFGGEPL-MNFDVVKQLVAYARSIEKEAGKNFRF---TLTTNGM 193
Query: 191 RINPELIQCLKEAGKPVYIAI 211
I+ ++I+ + V +++
Sbjct: 194 LIDDDVIEFANKEMSNVVLSL 214
>gi|319424662|gb|ADV52736.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens
200]
Length = 337
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179
>gi|325289811|ref|YP_004265992.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM
8271]
gi|324965212|gb|ADY55991.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM
8271]
Length = 445
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 74/227 (32%), Gaps = 82/227 (36%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF R+M + ++ D Y + T G + LS+
Sbjct: 91 RCRNNCVFCFVRQMPQGLRKSLYDKDD-----DY--------RLSVTQGSYITLSN---- 133
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216
L ++ILR H P+Y+++HA +P
Sbjct: 134 -----LTEKDFLRILRLHIS----------------------PLYLSVHAWNPAARKKLM 166
Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGIN------DDPEILANLMRTFVELRIKPY 269
+ I RL I L +Q VL+ G N D LA L + + + P
Sbjct: 167 KNSRAALLPEQIQRLVEGRITLHTQIVLVPGYNDGEILWDTVNHLAELYPSVQSVGVVP- 225
Query: 270 YLHHPDLAAGTSHFR--LT-------------IEEGQKIVASLKEKI 301
G + FR L +EEG K+ +L+++
Sbjct: 226 --------VGLTKFREGLPLLRTVTRKEAEMILEEGTKLQETLRQRT 264
>gi|323483386|ref|ZP_08088774.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
gi|323691115|ref|ZP_08105395.1| radical SAM domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323403240|gb|EGA95550.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
gi|323504812|gb|EGB20594.1| radical SAM domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 291
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT----EAALAYI 138
+G+V+R P ++++ C C FC M ++ V ++ + A
Sbjct: 4 EGVVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKDKQFRVRKMEEIMADLQEAHDAY 60
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQIL-RFHSRVPIVDPQRINPEL 196
+ +V GD LI+ + L +L ++ + V + + + I+ R + E
Sbjct: 61 AAY--VQKVFLADGDALIMKTEDLLTILAAVKELFPRVTRVAAYGTAQDIL---RKSEEE 115
Query: 197 IQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGI 235
++ LKEAG + + H + E IAA +L GI
Sbjct: 116 LRLLKEAGLGIVYVGAETGDDEILEYIHKGVTAGEVIAAGQKLKRCGI 163
>gi|138896073|ref|YP_001126526.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
gi|196248967|ref|ZP_03147667.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
gi|134267586|gb|ABO67781.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
gi|196211843|gb|EDY06602.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
Length = 449
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L +L+ L + ++ +R S ++ ++ E+I L+ + K
Sbjct: 199 TGGYGTD---LKDYNFAALLRDLDEQVPGLKRIRISS----IEASQLTDEVIDVLRRSDK 251
Query: 206 PVYIAIHA 213
+ +H
Sbjct: 252 -IVRHLHI 258
>gi|323483779|ref|ZP_08089159.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
WAL-14163]
gi|323402970|gb|EGA95288.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
WAL-14163]
Length = 436
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 29/135 (21%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + G V+ + AA Y E++
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194
Query: 150 TGGDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
TG LS + L ++ L I+ ++ +R S ++P+ I E +
Sbjct: 195 TGI---HLSSYGVDFPEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSA 247
Query: 200 LKEAGKPVYIAIHAN 214
L K + H +
Sbjct: 248 LAGL-KSICPHFHLS 261
>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 349
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 19/120 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPL 155
+ + CP C FC +R++ G S + + L Y+ ++ EV F GG
Sbjct: 9 IFIPHYGCPNDCVFCNQRKITGMSTDISNSDVE-DTILEYLSYFKRKDNVEVAFYGG--- 64
Query: 156 ILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ L++ + H V+ +R +R P I+ +++ LK+ G +
Sbjct: 65 SFTAIPLEE-QSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYGVDII 118
>gi|15644072|ref|NP_229121.1| astB/chuR-related protein [Thermotoga maritima MSB8]
gi|148270594|ref|YP_001245054.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
gi|157364077|ref|YP_001470844.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
gi|170289295|ref|YP_001739533.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|222100244|ref|YP_002534812.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
gi|281412902|ref|YP_003346981.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|4981877|gb|AAD36391.1|AE001786_4 astB/chuR-related protein [Thermotoga maritima MSB8]
gi|147736138|gb|ABQ47478.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
gi|157314681|gb|ABV33780.1| Radical SAM domain protein [Thermotoga lettingae TMO]
gi|170176798|gb|ACB09850.1| Radical SAM domain protein [Thermotoga sp. RQ2]
gi|221572634|gb|ACM23446.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
gi|281374005|gb|ADA67567.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 463
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 30/195 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ L + VC + CR+C+ G + L + + + GG+PL
Sbjct: 83 RLALNVSQVCRLKCRYCYANAGTYGNPG-FMKRNVLVRTLDFFLSNYNVHNIHIFGGEPL 141
Query: 156 ILSHKRLQKVLKTLRY-----IKHVQILRFHSRVPIVD-----PQRINPELIQCLKEAGK 205
L+ + ++++ + L +++ + + + + + +I
Sbjct: 142 -LNIEMIEEMFRILTSKYAKKFNNLR-ITVATSLFVSEETINRFIKIYESYKDKF----- 194
Query: 206 PVYIAIHANHPYEFSEEAIAAIS------RLANAGIILLSQSVLLKGINDDPE-ILANLM 258
+Y+ + + P E + ++ I LL Q KG + E L
Sbjct: 195 QIYMVVSLDGPKEIQDNTRPSLDSKSSSFDRIKNNINLLKQ----KGFSISFEVTYTKLH 250
Query: 259 RTFVELRIKPY-YLH 272
+ +K Y Y +
Sbjct: 251 KQLGWNILKIYKYFY 265
>gi|87307866|ref|ZP_01090009.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
gi|87289480|gb|EAQ81371.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
Length = 355
Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 39/191 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + H C + C +C+ E + K + A+ ++ + E+ F GG+PLI
Sbjct: 9 LVVNHACNLRCTYCYTGEKIRRPMSPETGRKAIDRAIRSVRRDGTL-ELSFFGGEPLI-E 66
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV-------------PIVDPQRINPELIQCLKEAGK 205
+ + +++ R Q +R + + PQ L + G
Sbjct: 67 AELILDLVRYARSAADEQDVRLALSMTTNGTIESAAAWSVMTLPQ-----LELAISHDGL 121
Query: 206 PVYIAIHANHPYEFSEE-----AIAAISRLANAG----IILLSQSVLLKGINDDPEILAN 256
P + H H ++RL +AG I+++ Q D L +
Sbjct: 122 P---SAHDGHRVTVDGLPSSFRVQNTMARLIDAGKEFRIVMVVQP-------DSVASLPD 171
Query: 257 LMRTFVELRIK 267
M L ++
Sbjct: 172 GMEFLYTLGVR 182
>gi|224368605|ref|YP_002602768.1| HemN1 [Desulfobacterium autotrophicum HRM2]
gi|223691321|gb|ACN14604.1| HemN1 [Desulfobacterium autotrophicum HRM2]
Length = 291
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 35/162 (21%)
Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
+ +LL++ C C FC M K ++ S + E L + + V G
Sbjct: 15 NSLLLQVTVGCTHNKCTFCT---MYKDTKFSIESLEQIEEDLKEARALYGDVKRVFLVNG 71
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILR-------FHSRVPIVDPQRINPELIQCLKEAG 204
D +LS RL+ ++K + V+++ S+ + ++ L++
Sbjct: 72 DAFVLSANRLKPIVKLIIQYFPDVKVITMYASINNIKSK---------TDQELEELRDLR 122
Query: 205 -KPVYIAIHANHPYEFSEE----------AIAAISRLANAGI 235
++I H E + E + + RL AGI
Sbjct: 123 INDLWIGTETGH--EETLEYMNKGFSLKDSYEQLERLNKAGI 162
>gi|332877549|ref|ZP_08445296.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684655|gb|EGJ57505.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 447
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 32/190 (16%)
Query: 56 IARQFIPQKEELNILPEERE--DPIGDNNHSPLKGIVHRY--------PDRILLKLLHVC 105
I R +E L +LP ER+ D + P K I H + R LK+ C
Sbjct: 113 ILRY---LEERLPLLPAERKLADAEHEAYTVPTKDI-HTFVPSCSCGDRTRYFLKVQDGC 168
Query: 106 PVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHK 160
YC +C G + ++S + E A E++ TG GD + +
Sbjct: 169 DYYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGE 223
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEF 219
++K L ++ + R S ++P + E++ E+ H + P
Sbjct: 224 SFLDLVKALDRVEGIARYRISS----IEPNLLTEEVLAYCAESR---AFMPHFHIPLQSG 276
Query: 220 SEEAIAAISR 229
S+E + + R
Sbjct: 277 SDEVLKLMRR 286
>gi|312880310|ref|ZP_07740110.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
DSM 12260]
gi|310783601|gb|EFQ23999.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
DSM 12260]
Length = 446
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
R + + H C +C +C + S+D EA L ++ + E+ G
Sbjct: 147 RAYVTIAHGCDHFCAYC-----IVPYVRGRFQSRDPEAILREVRCLADRGVREITLLGQN 201
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D ++L+ + + V +R+ + P+ + EL++ + E
Sbjct: 202 VNRFGVDRSDGFSFP-----RLLREVAEVPGVLRVRYATSHPVD----FSEELVRVMAEH 252
Query: 204 GK 205
+
Sbjct: 253 PR 254
>gi|300853988|ref|YP_003778972.1| putative oxidoreductase [Clostridium ljungdahlii DSM 13528]
gi|300434103|gb|ADK13870.1| predicted oxidoreductase [Clostridium ljungdahlii DSM 13528]
Length = 463
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 19/129 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
+ R LK+ C +C +C + SK + + ++ ++ E+I
Sbjct: 164 QKRTRAFLKIQDGCNRFCSYC-----AIPFARGAVCSKSPDKIIEEVEKLSRNNFKEIIL 218
Query: 150 TGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+G L ++L+ + +K + +R S +DPQ +I+ + +
Sbjct: 219 SGIHIASYGTDIDGDWNLLRILQEIDKVKGIDRVRIGS----IDPQFFTEGVIEKMSKLE 274
Query: 205 KPVYIAIHA 213
K + H
Sbjct: 275 K---LCPHF 280
>gi|167581126|ref|ZP_02374000.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis TXDOH]
Length = 370
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K ++ +++ L + V
Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119
>gi|194366021|ref|YP_002028631.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
maltophilia R551-3]
gi|226707388|sp|B4SL67|MOAA_STRM5 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|194348825|gb|ACF51948.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
maltophilia R551-3]
Length = 326
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 13/175 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L C C +C + L + + + ++ TGG+P +
Sbjct: 17 LSLTEACNFRCSYCLPDGYQVDGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
L +++ T+ ++ + + +P P R + ++ +
Sbjct: 76 D--LDEIIATVAAAPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133
Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
H E ++ G+ + +VLL+G+NDD P+ + L +R
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186
>gi|262041408|ref|ZP_06014612.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041262|gb|EEW42329.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 395
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 34/232 (14%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
P+ SP+ + P + C + CR+C+ +K + E +
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDEKPVNKMDDARLEQFI 63
Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179
Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|229102501|ref|ZP_04233207.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
gi|228680891|gb|EEL35062.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
Length = 383
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H E + + AI L I + +V+ D + +A L+
Sbjct: 122 SLDGPTAEIHDHFRGTEESFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLKEMAMLIEE 181
Query: 261 F 261
Sbjct: 182 L 182
>gi|283797908|ref|ZP_06347061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|291074375|gb|EFE11739.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
gi|295091886|emb|CBK77993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium cf.
saccharolyticum K10]
Length = 483
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ I + D I ++ S +YP + + ++ C +C +C + G ++
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 221
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180
+D + + + EV+ G + + K L ++L+ + I+ ++ +RF
Sbjct: 222 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 277
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ P+ ++ ELI+ ++++ K + +H
Sbjct: 278 MTSH----PKDLSDELIEVMRDS-KKICRHLH 304
>gi|297619205|ref|YP_003707310.1| Radical SAM domain-containing protein [Methanococcus voltae A3]
gi|297378182|gb|ADI36337.1| Radical SAM domain protein [Methanococcus voltae A3]
Length = 327
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 92 RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y ++LKL + C + C++C+ ++ G + + + A+ Y+ ++
Sbjct: 2 KY---LILKLTNNCNLRCKYCYANLSSDLDGDISNRNMDFETAKKAIDYLLSIDNNLKIQ 58
Query: 149 FTGGDPLILSHKRLQKVLK 167
FTGG+PL L+ + L+K+++
Sbjct: 59 FTGGEPL-LNFELLKKIVE 76
>gi|238019340|ref|ZP_04599766.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
gi|237864039|gb|EEP65329.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
Length = 431
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 29/163 (17%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ ++ +N E G+ + R +K+ C YC FC
Sbjct: 117 RQINAVRDIMNESNFEEMPLYGNESDKA----------RAFMKIQEGCNNYCAFC----- 161
Query: 118 VGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTG---GDPLILSHKR--LQKVLKTL 169
+ L S+ + + + E E++ TG G+ + R L V+K L
Sbjct: 162 IIPYTRGKLKSRKVDDIVQEAKRLVEH-GFHEIVLTGIHLGNYGVELPGRPTLADVVKAL 220
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
I + +RF S ++ ++ EL++ L K V +H
Sbjct: 221 LEIPDLYRIRFGS----IESVEVSDELVE-LMATNKRVCPHLH 258
>gi|229590703|ref|YP_002872822.1| putative radical SAM protein [Pseudomonas fluorescens SBW25]
gi|229362569|emb|CAY49476.1| putative radical SAM protein [Pseudomonas fluorescens SBW25]
Length = 500
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 82 NHSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
H P + +Y R L + C C++C LS D
Sbjct: 80 RHDPFPEMAAQYRSRKDFLFQGPALHLFVVTLRCNHTCQYCQVSRAPLGGSNHDLSEADA 139
Query: 132 EAALAYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+AA+ + + + V F GG+PL L+ +R++++++
Sbjct: 140 QAAVDRLFESNAPALTVEFQGGEPL-LAFERVRQIVE 175
>gi|168187897|ref|ZP_02622532.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169294251|gb|EDS76384.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 444
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ C C +C ++ G + L A + E+I G D I
Sbjct: 147 AYIRISEGCDNLCTYCIIPKIRGKYRSRSL-ESIINEAKE--LANMGVKELILVGQDTAI 203
Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+L +LK L I+ ++ +R V P+ I ELI+ +K K
Sbjct: 204 YGSDLYEENKLSTLLKELSNIEDIEWIR----VLYTYPEEITDELIEEIKNNDK 253
>gi|160903003|ref|YP_001568584.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
gi|160360647|gb|ABX32261.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
Length = 455
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 13/123 (10%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFT 150
+L L C C +CF+ E + D+E + +I + + T
Sbjct: 91 TFVLYLTLNCNFNCVYCFQGEE-NKNRNITFKKNDSELIVNFIKKKFDASDDEKLTLTLT 149
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+PL L +Q+++ L V R +R I + ++ E + ++ +++
Sbjct: 150 GGEPL-LKFPLIQEIVTKLES--QVGKNRLSTR-LISNGSLLDEEKCRFFEKHN---WVS 202
Query: 211 IHA 213
Sbjct: 203 TQI 205
>gi|124026938|ref|YP_001012258.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus
butylicus DSM 5456]
gi|123977632|gb|ABM79913.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus
butylicus DSM 5456]
Length = 415
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 85/224 (37%), Gaps = 31/224 (13%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ + E P+ P + R P + + C + C+ C R + L
Sbjct: 1 MKVGSEHSGYPLH--RTWPFE----RNPLLVFWETTKACMLACKHC-RASAILKSLPGEL 53
Query: 127 SSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
++++ + + Q + ++ TGGDPL+ S + ++ + + LR P
Sbjct: 54 TTEEAYKLIDDVAAFGQPYPILVLTGGDPLLRSD--IWDIIAYAKG----KGLRLAV-AP 106
Query: 186 IVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIA----------AISRLANAG 234
V P + + ++ L E G V I++ + P E + AI G
Sbjct: 107 AVSPN-LTEDKVKKLAELGVDGVSISLDGSRP-EIHDGIRGTSGVFEKTLWAIKTFQEYG 164
Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ + + +++ D+ LA++ ++L +K + + +
Sbjct: 165 VRVQVNTAVMR---DNVHDLADIAALLLKLGVKVWEVFYLVPVG 205
>gi|120597074|ref|YP_961648.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. W3-18-1]
gi|146291496|ref|YP_001181920.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens
CN-32]
gi|120557167|gb|ABM23094.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. W3-18-1]
gi|145563186|gb|ABP74121.1| GTP cyclohydrolase subunit MoaA [Shewanella putrefaciens CN-32]
Length = 337
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179
>gi|308172658|ref|YP_003919363.1| hypothetical protein BAMF_0767 [Bacillus amyloliquefaciens DSM 7]
gi|307605522|emb|CBI41893.1| hypothetical protein yfkA1 [Bacillus amyloliquefaciens DSM 7]
Length = 177
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L ++E + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLEEIPLLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L + + P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|256828649|ref|YP_003157377.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
baculatum DSM 4028]
gi|256577825|gb|ACU88961.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
baculatum DSM 4028]
Length = 418
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 80/264 (30%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
R+ L + C + C +C R+ ++ ++S + A+ Y ++++ +I V
Sbjct: 22 GRVHLPVAPGCNIQCNYCNRKYDCVNESRPGVTSAILPPDRAVEYLDEVLKKEPRITVVG 81
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----------IVDPQRINPELI 197
G GDP+ + +TL I+ R +++ P + P+ ++
Sbjct: 82 IAGPGDPM-------AEAKRTLETIE-----RINAKYPNMLYCLSSNGLALPEHVD---- 125
Query: 198 QCLKEAGKPVYIAIHAN-HPYEFSEEA----------------------------IAAIS 228
L E G H E + +I
Sbjct: 126 -RLAELG-----VTHVTVTMNAVDPEIGAKIYSWVRVGKVVYRGVEGAKILLERQLESIR 179
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI---KPYYLHHPDLAAGTSHFRL 285
L GI + S+++ G+ND I + + I P LH
Sbjct: 180 LLKAKGITVKVNSIIIPGVNDHHLIEVAKVAASLGADIQNLIP--LHPTADTPFAG---- 233
Query: 286 TIEE-GQKIVASLKEKISGLCQPF 308
+EE ++++ L+ K G P
Sbjct: 234 -VEEPTKELIHELRAK-GGALVPQ 255
>gi|206559374|ref|YP_002230135.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia J2315]
gi|206561224|ref|YP_002231989.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia J2315]
gi|198035412|emb|CAR51288.1| molybdenum cofactor biosynthesis protein A 2 [Burkholderia
cenocepacia J2315]
gi|198037266|emb|CAR53188.1| molybdenum cofactor biosynthesis protein A 1 [Burkholderia
cenocepacia J2315]
Length = 370
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|218246611|ref|YP_002371982.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
8801]
gi|257059654|ref|YP_003137542.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
8802]
gi|218167089|gb|ACK65826.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
8801]
gi|256589820|gb|ACV00707.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
8802]
Length = 491
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%)
Query: 59 QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
Q I P +E + P ED H Y R+ + + C + C +C R+
Sbjct: 41 QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87
Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160
G + + AL + Q+ + G GDPL +
Sbjct: 88 DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147
Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200
L + + I HV L + ++DP ++I P ++
Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ K + + H + ++ L A I+ SV++ GIND
Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245
>gi|2183203|gb|AAC33370.1| nitrogenase [Cyanothece sp. PCC 8801]
Length = 558
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%)
Query: 59 QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
Q I P +E + P ED H Y R+ + + C + C +C R+
Sbjct: 41 QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87
Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160
G + + AL + Q+ + G GDPL +
Sbjct: 88 DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147
Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200
L + + I HV L + ++DP ++I P ++
Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
++ K + + H + ++ L A I+ SV++ GIND
Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245
>gi|317152988|ref|YP_004121036.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943239|gb|ADU62290.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 315
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 30/173 (17%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C + CR+C+ ++ + ++ LA + E ++ ++ GG+PL
Sbjct: 18 ITTSCSLSCRYCYASHW---KEERHIDTERFLELLAEMDEM-GVFLLLLAGGEPLRHPD- 72
Query: 161 RLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPV---YIAIHANHP 216
++L+ + V +L + P EL L E K + + + +HP
Sbjct: 73 -FFRILEAAIQTRMSVSVLTNGTESP---------ELAVRLAECHKNIHPFVVQVSLDHP 122
Query: 217 YEF--------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
E + I LA G+ +V+ +N D L +L F
Sbjct: 123 SEAVNDRTRGKTASVRQFIHTLAENGLTPQIATVIT-TVNKDR--LGDLFHAF 172
>gi|260587677|ref|ZP_05853590.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
gi|260541942|gb|EEX22511.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
Length = 312
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+ + I + D I + P++ +YP + + ++ C +C +C + G ++
Sbjct: 175 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 229
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176
+ KD + + + + EV+ G + + K L + +L + I+ ++
Sbjct: 230 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 285
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+RF + P+ ++ ELI+ +K + K
Sbjct: 286 RIRFMTSH----PKDLSDELIEVMKNSKK 310
>gi|255321817|ref|ZP_05362967.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
RM3277]
gi|255300921|gb|EET80188.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
RM3277]
Length = 322
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 19/162 (11%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C + + +LS ++ + + ++ TGG+PL+
Sbjct: 15 ISVTQRCNFRCKYCMPKTPFSWEPRENLLSFEEL-FLFVKVCLDEGVKKIRITGGEPLLR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------ 210
L K + + L + + + LK AG K + ++
Sbjct: 74 KD--LDKFIAMINEHSPDVDLAITTNGF------MLKHYAKALKNAGLKRINMSLDSLKT 125
Query: 211 --IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E +A + AG+ + +V L+G+NDD
Sbjct: 126 EKAKFLAQKSVLHEVLAGLDAALEAGLKVKLNTVALRGVNDD 167
>gi|226311189|ref|YP_002771083.1| menaquinone biosynthesis protein [Brevibacillus brevis NBRC 100599]
gi|226094137|dbj|BAH42579.1| putative menaquinone biosynthesis protein [Brevibacillus brevis
NBRC 100599]
Length = 368
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
+VC YCRFC GS +G VL E IQE + E++ GG
Sbjct: 60 TNVCDTYCRFCAFYRPPGSSEGYVLPR---ETIFEKIQETVDVGGTEILMQGG---TNPD 113
Query: 160 KRLQKVLKTLRYIK 173
+L LR IK
Sbjct: 114 LKLDYYTDLLRAIK 127
>gi|323463736|gb|ADX75889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
pseudintermedius ED99]
Length = 340
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +LS ++ + + + +V TGG+
Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDNYVFLPKNQLLSFEEIVRITK-LYAQLGVKKVRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L +++ + I+ ++ +
Sbjct: 77 PLLRRD--LHQLIAQITQIEGIEDI 99
>gi|253682144|ref|ZP_04862941.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
gi|253561856|gb|EES91308.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
Length = 433
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 23/129 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SKD E + +++ S+ E+I +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKDPEIIIDEVKKLSEHGFKEIILSG 195
Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAG 204
D L +VLK + I+ + +R S I PE +KE G
Sbjct: 196 IDIASYGVDLEGDWNLLRVLKAIDEIEGINRVRIGS---------IGPEFFNEDIIKEIG 246
Query: 205 KPVYIAIHA 213
+ H
Sbjct: 247 SLKKLCPHF 255
>gi|291297322|ref|YP_003508720.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279]
gi|290472281|gb|ADD29700.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279]
Length = 342
Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 48/209 (22%)
Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEK--SQIWE 146
Y +R + + + CP C FC M + +++ + L AY Q+ +I
Sbjct: 95 YLNRKTICISSMVGCPAGCTFCATGRM--GFGRNLTAAEMLDQVLFAAYHQQHAPREIRN 152
Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC------ 199
V+ G G+PL+ L+ V K L + H + P+RI +
Sbjct: 153 VVLMGMGEPLL----NLENVFKALERM-------LHPEGLAMSPRRITLSTVGIPRGIYK 201
Query: 200 LKEAGK--PVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVL 243
+ E G + +++HA H Y +E EA+ I L L
Sbjct: 202 MAEWGLEVRLALSLHAPDDETRQRIIPTAHRYSIAEIMEAVRHYYAKTKRRITLE--YTL 259
Query: 244 LKGINDD---PEILANLMRTF-VELRIKP 268
LKG+ND LA R V + + P
Sbjct: 260 LKGVNDHDWQARALAQHFRGLSVHMNLIP 288
>gi|171317149|ref|ZP_02906351.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
gi|171097716|gb|EDT42546.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
MEX-5]
Length = 370
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F +
Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLHDLRISVTDRCNFRCVYCMPRDVFDKNYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|146337422|ref|YP_001202470.1| putative Fe-S oxidoreductases [Bradyrhizobium sp. ORS278]
gi|146190228|emb|CAL74220.1| conserved hypothetical protein; putative predicted Fe-S
oxidoreductases [Bradyrhizobium sp. ORS278]
Length = 470
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 31/171 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
L+++ C + C CF Q+ E L + Q + + V +GG+P
Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRAHFSPLATVERMLDALVQSEGEPDLVQISGGEP- 159
Query: 156 ILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L + +L +R I+HV I LR R P + + L E + + +
Sbjct: 160 TLHPEFFD-ILAAVRARPIRHVMINTNGLRIA-REP---------DFVSRLAETKRGLEV 208
Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + A+ L AGI + + +G+NDD
Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLERAGISTTLVATIKRGVNDD 259
>gi|170732420|ref|YP_001764367.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
gi|254245935|ref|ZP_04939256.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
cenocepacia PC184]
gi|124870711|gb|EAY62427.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
cenocepacia PC184]
gi|169815662|gb|ACA90245.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia MC0-3]
Length = 370
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLARL 116
>gi|107022186|ref|YP_620513.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia AU 1054]
gi|116689132|ref|YP_834755.1| molybdenum cofactor biosynthesis protein A [Burkholderia
cenocepacia HI2424]
gi|105892375|gb|ABF75540.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
gi|116647221|gb|ABK07862.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
Length = 370
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
Length = 481
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 42/179 (23%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS------KDTEAALAYIQEK 141
+ H D L + C +C +C F +VG++K L +D + +
Sbjct: 150 VQHETRDAALYVGIPYCASHCLYCSFPSRLVGNEKAERLLDFTNKLIEDIQDVQRLCSDT 209
Query: 142 S-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK------HVQILRFHSRVPIVDPQRINP 194
+I + GG P LS + +++++ L+ + V+ R P +
Sbjct: 210 GIRIDSIYVGGGTPTSLSVEAVERIMSALQPLAGACREWTVEAGR---------PDTMTE 260
Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS 239
E + L+ G + I P + + A+ R +AG +++
Sbjct: 261 EKARILRAYGVDRISIN-----PQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVIN 314
>gi|289548187|ref|YP_003473175.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
DSM 14484]
gi|289181804|gb|ADC89048.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
DSM 14484]
Length = 472
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 38/211 (18%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H Y R+ + + C + C +C R+ G + + + LA E Q+
Sbjct: 39 HFYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAKKVLAVAMEIPQL 97
Query: 145 WEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ----------R 191
V G GDPL + + +++K +++ + ++D
Sbjct: 98 TVVGIAGPGDPLANPERTFRTFELIKE--KAPDIKLC-LSTNGLVLDKYINKIKDLEIDH 154
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAI--------AAISRLANAGIILLSQSVL 243
+ + + +Y I NH +EA + GI++ +V
Sbjct: 155 VTITINAVSVDTASKIYPWIFYNHRRYRDKEAAKILLEKQYEGLQACVENGILVKVNTVF 214
Query: 244 LKGINDDPEILANLMRTFVELR-----IKPY 269
+ IN E + L + + I PY
Sbjct: 215 VPEIN--GEEIPELSKKVRSMGAFLHNIMPY 243
>gi|237745122|ref|ZP_04575603.1| predicted protein [Fusobacterium sp. 7_1]
gi|229432351|gb|EEO42563.1| predicted protein [Fusobacterium sp. 7_1]
Length = 367
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 36/185 (19%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C C+ + + + T E L Y Q+ ++I + GGDP +
Sbjct: 31 FYITNKCTESCEHCYLKNTKIQKELTTKEVISKIEEFLEYCQKTNKIPIIDLIGGDPFLR 90
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
++ +L+ L+ ++ + F + P + PQ I L E G Y + +
Sbjct: 91 LD--IKNILRYLK----LKKINFGIKGNPNLLPQNI-----NLLVEYGARRY-QLSLDGT 138
Query: 217 YEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
E + + I +I L + I + + L E L +
Sbjct: 139 EEIHDRIRSKGSFKKTIESIKLLNDVNIPVNIKFTL------SSENETELWKLL------ 186
Query: 268 PYYLH 272
YYL+
Sbjct: 187 -YYLY 190
>gi|170700217|ref|ZP_02891233.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
gi|170134850|gb|EDT03162.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
IOP40-10]
Length = 370
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F +
Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKNYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|158320587|ref|YP_001513094.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
OhILAs]
gi|229890436|sp|A8MFD5|MIAB_ALKOO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|158140786|gb|ABW19098.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
OhILAs]
Length = 471
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ D ++G+ +Y + + +++ C +C +C G ++ ++ A
Sbjct: 159 VWDEETGIVEGLPANRKYDLKGFINIMYGCNNFCTYCIVPYTRGRERSREVA-DIIREAT 217
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDP 189
+ E+ G + + K L+ +L+ L I ++ +RF + P
Sbjct: 218 D--LANNGTKEITLLGQN-VNSYGKTLEHPIDFADLLRALNKIDGIERIRFMTSHPKDLS 274
Query: 190 QRINPELIQC 199
+R+ + +C
Sbjct: 275 ERLIDAIAEC 284
>gi|327398946|ref|YP_004339815.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411]
gi|327181575|gb|AEA33756.1| Radical SAM domain protein [Hippea maritima DSM 10411]
Length = 356
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154
R+ ++L C C+ CF+ +K + + + ++ EV+ G G+P
Sbjct: 22 RVYIELTSACNFNCKMCFKNAFT--EKDGFMDKRTLSNLKKSLTSLPKLKEVVLGGIGEP 79
Query: 155 LILSHKRLQKVLKTLRY 171
LI + L+ ++ L+
Sbjct: 80 LIHND--LKDIVTFLKE 94
>gi|154496671|ref|ZP_02035367.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
29799]
gi|150273923|gb|EDN01023.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
29799]
Length = 386
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 57/170 (33%), Gaps = 39/170 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-------------AALAYIQEKSQI 144
++ C + C++CF E S + + + + Y +++
Sbjct: 21 IIACTKECNMRCKYCFEEENFKSDYSVPSAKINADFQLGIPYFERFGRELIEYNRKRGFR 80
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
E F GG+P+++ + + ++ + + + + I E++ L++
Sbjct: 81 TEFTFHGGEPMLIKPELIAQLCEYYISLDPAVLFNVQTNGTIC-----TEEMLGLLRKYR 135
Query: 205 KPVYIAI----------------HANHPYEFSEEAIAAISRLANAGIILL 238
V ++I H H + I ++ AGI L
Sbjct: 136 FRVGVSIDGTEALHDENRVFPNGHGTH-----SVVMQNIRKMQKAGIQLG 180
>gi|78065694|ref|YP_368463.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. 383]
gi|77966439|gb|ABB07819.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
Length = 370
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
P+ D + P + G+ H PD L + + C C +C F ++
Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+L+ ++ E + ++ TGG+PL+ K L+ +++ L +
Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116
>gi|118579699|ref|YP_900949.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118502409|gb|ABK98891.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
Length = 344
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 17/156 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY ++L L C + C +C+ G ++G +S + AL + V +G
Sbjct: 5 RY---LVLGLTTRCNLSCAYCY---HAGLERGMDMSPEVARTALDLVALGEGPLHVQLSG 58
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P L+ + ++ V+ +R +K + + + ++ +L++ L E G V +++
Sbjct: 59 GEP-TLAREMVRYVVAEIRRLKRPCTVGIQTNATL-----LDEDLVRFLGEHGVQVGVSL 112
Query: 212 HANHP--YEFSEEAIAA---ISRLANAGIILLSQSV 242
EA A ++ L G+ +V
Sbjct: 113 DGPPAIQQRLRGEADKALLGLTLLEKMGVPFRVTTV 148
>gi|296446358|ref|ZP_06888303.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
gi|296256131|gb|EFH03213.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
Length = 298
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 95 DRILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
D ++L + C C FC EM + + + E L ++ + V
Sbjct: 20 DSLILPVTDGCSWNRCAFC---EMYTAPQKRFRPRDEAE-VLESLRRCGAELGDSVKRVF 75
Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178
GD + LS +RL +L +R + V+ +
Sbjct: 76 LADGDAMTLSTRRLATILAAIRRELPGVRRV 106
>gi|295115178|emb|CBL36025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
bacterium SM4/1]
Length = 457
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ I + D I ++ S +YP + + ++ C +C +C + G ++
Sbjct: 141 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 195
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180
+D + + + EV+ G + + K L ++L+ + I+ ++ +RF
Sbjct: 196 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 251
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ P+ ++ ELI+ ++++ K + +H
Sbjct: 252 MTSH----PKDLSDELIEVMRDS-KKICRHLH 278
>gi|116748310|ref|YP_844997.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697374|gb|ABK16562.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 331
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 29/188 (15%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
V ++P ++L+ H C + C C R T+ + L + E V
Sbjct: 23 VEKFPLVLMLEPTHRCNLTCSGCGRIR---EYHDTLHQEMTLDECLRSVDESPSP-VVTI 78
Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+PL+ S R+Q ++ + L KH+ F + + E + + +
Sbjct: 79 TGGEPLLYS--RIQALVDSVLARKKHIY---FCTNAL------LLEESLPMFQPHSHFTW 127
Query: 209 IAIHANHPYEFSEE-------AIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
+H + + A++ + A G + + + + + D + L L
Sbjct: 128 -NVHFDGTETVHDAIIGRPGGFQKALAGVRAAKARGFRVSTNTTVYR--ETDVDDLERLF 184
Query: 259 RTFVELRI 266
+
Sbjct: 185 EQLAAAGV 192
>gi|304411770|ref|ZP_07393382.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS183]
gi|307306178|ref|ZP_07585923.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
BA175]
gi|304349958|gb|EFM14364.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS183]
gi|306911051|gb|EFN41478.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
BA175]
Length = 337
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179
>gi|149183016|ref|ZP_01861471.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
gi|148849300|gb|EDL63495.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
Length = 450
Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 82/205 (40%), Gaps = 22/205 (10%)
Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG---DNNHSPLKGIVHRY 93
I T + + P + I R + +E ++ +E+ D + D S + +
Sbjct: 68 IRPTKLYHKSVREGTPREEIRR----KLKEDYLITDEKIDLMERIVDRQLSVVPDLYSLQ 123
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWE 146
+ + + CP C +C F + ++G V S + + +++E +I
Sbjct: 124 KEISIYIGIPFCPTKCAYCTFPAYAILGKQGRVDSFLTGLHYEIQETGRWLKENGVKITT 183
Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
+ + GG P ++ +++ + + + R V +R + V P I P+ ++ L +
Sbjct: 184 IYYGGGTPTSITAEQMDLLYEEMYRSFPDVDQVREVT-VEAGRPDTITPDKLEVLNKWNI 242
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
+ I P ++ E + AI R
Sbjct: 243 DRISIN-----PQSYTNETLKAIGR 262
>gi|298373586|ref|ZP_06983575.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
gi|298274638|gb|EFI16190.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
Length = 417
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C YC +C G + ++ A+A E+I TG
Sbjct: 141 RTRYFLKVQDGCNYYCTYCTIPFARGKSRSASVAVTMDTIRRAIA-----EGAREIILTG 195
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD S +R +++ + + R S V+P + ++I+ + + +
Sbjct: 196 VNIGDFGNGSSERFIDLVRNIDDMTDEVRFRISS----VEPNLLEDDIIRLIAHSRR--- 248
Query: 209 IAIHA 213
IA H
Sbjct: 249 IAPHF 253
>gi|284047499|ref|YP_003397838.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
gi|283951720|gb|ADB46523.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
Length = 302
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTGGDP 154
+L++ C C FC M + +V ++ + ALA ++Q+ + GD
Sbjct: 24 ILRVTRGCAHNTCTFC---AMYKDVRFSVCPDEEISRQIALAARYARNQVKRIFLADGDA 80
Query: 155 LILSHKRLQKVLKTLRY-IKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPV 207
L+L ++L K+L L ++Q + R + R + E + L+EAG +
Sbjct: 81 LVLPTEKLLKILAVLYRTFPNLQRVTSYAGPRDIL----RKSDEDMVRLREAGLKM 132
>gi|219667417|ref|YP_002457852.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219537677|gb|ACL19416.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 318
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 55 PIARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
P+ RQ I Q E+L E + ++H G VH R+ L + C + CRFC
Sbjct: 12 PLRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAVHGKKGRLHLPISPACNIQCRFCR 71
Query: 114 R-----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
R G KG + + + ++ +I V G GD L
Sbjct: 72 RACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 119
>gi|148263090|ref|YP_001229796.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146396590|gb|ABQ25223.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 332
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 29/186 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP ++L+ H+C + C C R T+ E LA + E V TG
Sbjct: 25 KYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQDMMSLEECLASVDECPAP-VVTITG 80
Query: 152 GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G+P + + ++++ L KH+ + +++ + ++ +
Sbjct: 81 GEPFLYP--HIFELIEAVLERGKHIY---LCTNALLLEKA------LDNMRPHP-NFTLN 128
Query: 211 IHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLMRT 260
IH H E AI + A G + + + + K D + L
Sbjct: 129 IHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEMLFSR 186
Query: 261 FVELRI 266
E+ +
Sbjct: 187 LQEIGV 192
>gi|310643295|ref|YP_003948053.1| radical sam domain protein [Paenibacillus polymyxa SC2]
gi|309248245|gb|ADO57812.1| Radical SAM domain protein [Paenibacillus polymyxa SC2]
Length = 368
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
P ++ ++ C + C C R E L+ ++ + L I E V+FTG
Sbjct: 14 PFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTFEEGKKLLDQIAEMNHP---LVVFTG 69
Query: 152 GDPLILSH 159
GDPL
Sbjct: 70 GDPLSRPD 77
>gi|322434214|ref|YP_004216426.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
gi|321161941|gb|ADW67646.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
Length = 469
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 34/181 (18%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGI----VHRYPDR------ 96
+ +DP + I L+ ++ I D + P +HRY +
Sbjct: 138 DADDPNWKSKIAGAAYLDEAGGFHQNAARAQIADLDAQPWPARHAIDLHRYVETWRTHHQ 197
Query: 97 ---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ CP CR+C V Q + ++ K ++ + D
Sbjct: 198 QGSVNFITARGCPYRCRWC--SHQVYGQTHRRRDPIKVVDEVEWL-MKEYTPDIAWVSDD 254
Query: 154 PLILSHKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
++H ++K +R I I SR R+N E++ L E G ++
Sbjct: 255 VFTINHDWIRKYSAEMRRRGLHIPFECI----SRA-----DRLNEEMLDLLAELGCFRIW 305
Query: 209 I 209
I
Sbjct: 306 I 306
>gi|222056186|ref|YP_002538548.1| protein of unknown function DUF512 [Geobacter sp. FRC-32]
gi|221565475|gb|ACM21447.1| protein of unknown function DUF512 [Geobacter sp. FRC-32]
Length = 433
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 67/213 (31%), Gaps = 64/213 (30%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKG 123
E+ + +E E P+G +P+ C C FCF ++ G +K
Sbjct: 61 WEMEVERDESE-PLGLIFQAPVP---------------AECGNKCIFCFVHQLPKGLRKP 104
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
+ +D + Y V D L IK ++
Sbjct: 105 LYVKDEDYRLSFLY------GNYVTLANIDA------------SDLERIKSQRL------ 140
Query: 184 VPIVDPQRINPELI--QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
P+ L+ + L + G P + E I LA AGI + +Q
Sbjct: 141 SPLYISVHATDPLVRERMLGKTGIPPIL--------EI-------IKELAGAGITMHTQV 185
Query: 242 VLLKGIND------DPEILANLMRTFVELRIKP 268
VL G+ND L++L L + P
Sbjct: 186 VLCPGVNDGKVLAQTVADLSSLFPAVASLAVVP 218
>gi|89894712|ref|YP_518199.1| hypothetical protein DSY1966 [Desulfitobacterium hafniense Y51]
gi|123279971|sp|Q24W37|RIMO_DESHY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|89334160|dbj|BAE83755.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 445
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+K+ C YC +C R + ++L ++ EA + EV+
Sbjct: 151 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 203
Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D + RL ++K + I+ ++ +R P+ ELI +KE K
Sbjct: 204 DTTRYGKDRYGEYRLPSLIKEIARIEGIEWIRL----MYCYPELFTDELITVMKETPK 257
>gi|293416947|ref|ZP_06659584.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
B185]
gi|291431523|gb|EFF04508.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
B185]
Length = 445
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|262384855|ref|ZP_06077987.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
gi|262293571|gb|EEY81507.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
Length = 444
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C G + ++S E A E++ TG
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQARE--VASKGGKEIVLTGVN 205
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L ++ + R S ++P I E I K
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|229584084|ref|YP_002842585.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
gi|228019133|gb|ACP54540.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
Length = 394
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ + + + L L + C C +CF++
Sbjct: 33 LRKGIVPEH--LKDIIEEGFSATDEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
>gi|46578994|ref|YP_009802.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. Hildenborough]
gi|120603415|ref|YP_967815.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
DP4]
gi|46448407|gb|AAS95061.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
str. Hildenborough]
gi|120563644|gb|ABM29388.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio vulgaris DP4]
gi|311232845|gb|ADP85699.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
RCH1]
Length = 341
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 26/187 (13%)
Query: 78 IGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDT 131
+ + P +V + R+ L + C + C +C+ + +L ++
Sbjct: 1 MNHYDDRPASSLVDLHGRRVRYLRLSVTDRCNLRCLYCWGGGGMRFI--PHDDILRYEEM 58
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ + +S + +V TGG+PL+ K + +++ +R LR +
Sbjct: 59 ARLVD-VAVESGVEKVRLTGGEPLV--RKNVLHLVELVRKKHPAIDLRITTNG------T 109
Query: 192 INPELIQCLKEAGKPVYIAI---------HANHPYEFSEEAIAAISRLANAGIILLSQSV 242
+ + L++ G H +F + +A + + AG+ L +V
Sbjct: 110 LLESHVAGLRDLGVSTVNVSLDTFRREVFHEVTGRDFLPQVMAGMEAVLAAGLSLKVNAV 169
Query: 243 LLKGIND 249
L+G+ND
Sbjct: 170 ALRGVND 176
>gi|317501694|ref|ZP_07959885.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088421|ref|ZP_08337336.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896945|gb|EFV19025.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408188|gb|EGG87676.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
3_1_46FAA]
Length = 431
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ T+ L ++ + EV+ TG
Sbjct: 143 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 197
Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LS + L ++K + ++ ++ +R S ++P I E + L E
Sbjct: 198 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 250
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 251 PK---VCPHF 257
>gi|307596561|ref|YP_003902878.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551762|gb|ADN51827.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length = 354
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 44/190 (23%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138
GIV R + I ++ +CP+ C +C R T+L E +
Sbjct: 31 GIVDRGTNIIEVRPTTLCPLSCIYCSVNAGPRSTNRWAEFVDDPETLL--MALEEVVR-F 87
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ I I G+P + L +++ ++ I V I+ +R+ E ++
Sbjct: 88 KGTKDIEVHIDGMGEPGVYP--YLTYLIRGIKEIDGVSIVSMQTRL-----YMFTEEELR 140
Query: 199 CLKEAGK---PVYIAI---------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240
L +AG + I NH E + A+ GI +++
Sbjct: 141 ELAQAGLDRINLSIDTLNPELAKKISGVPWYDVNHVMEL---VVQALEL----GINVIAS 193
Query: 241 SVLLKGINDD 250
V L IND+
Sbjct: 194 PVWLPSINDN 203
>gi|256811190|ref|YP_003128559.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
gi|256794390|gb|ACV25059.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
Length = 377
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EE+ EE D + + ++G ++++L + +C C +C E ++
Sbjct: 4 EEIEKYLEENFDKLPEGCKQCVRG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57
Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + I+E V TGG+PL L R K L L+ + FHS
Sbjct: 58 YANERLLTTVGEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLNALKN----EFDEFHS 112
Query: 183 RVPIVDPQRINPELIQCLKEAGK 205
+ P+ ++ E ++ LKEAG
Sbjct: 113 HLYAT-PETVDEEKLKLLKEAGL 134
>gi|226311193|ref|YP_002771087.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
NBRC 100599]
gi|254811536|sp|C0Z9B3|MOAA_BREBN RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|226094141|dbj|BAH42583.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
NBRC 100599]
Length = 339
Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 40/174 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C CR+C ++ G + +L+ ++ I + ++ TGG+
Sbjct: 18 ISVTDKCNFRCRYCMPADIFGPDFEFLPQSKLLTFEEITRLTQ-IFTSLGVGKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPE 195
PL+ + L ++++ +R ++ VQ + + RV + ++ E
Sbjct: 77 PLM--RRNLPELIRMIREVEGVQDIAMTTNGSLLSRHAQALKEAGLDRVTVSL-DSLDNE 133
Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
L G V + + I A+AG+ + V+ +G+ND
Sbjct: 134 RFGMLNGRGYQV-------------DSVLDGIRVAADAGLSIKINMVVQRGVND 174
>gi|328554278|gb|AEB24770.1| ribosomal protein S12 methylthiotransferase [Bacillus
amyloliquefaciens TA208]
gi|328912675|gb|AEB64271.1| ribosomal protein S12 methylthiotransferase [Bacillus
amyloliquefaciens LL3]
Length = 451
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L+ L ++ ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|325981206|ref|YP_004293608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Nitrosomonas sp. AL212]
gi|325530725|gb|ADZ25446.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Nitrosomonas sp. AL212]
Length = 442
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 45/144 (31%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC FC V S+ + L I I E+ G +
Sbjct: 148 TAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLTEIAVLAAQGIKEITLLGQN 202
Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+++ + +L+ L I ++ +R+ +
Sbjct: 203 VNAYLGMMNDGEIADFALLLEYLHDIPGIERIRYTT------------------------ 238
Query: 207 VYIAIHANHPYEFSEEAIAAISRL 230
+HP EF+ I A ++L
Sbjct: 239 -------SHPKEFTTRLIQAYNQL 255
>gi|308174331|ref|YP_003921036.1| 30S ribosomal protein S12 methylthiotransferase [Bacillus
amyloliquefaciens DSM 7]
gi|307607195|emb|CBI43566.1| ribosomal protein S12 methylthiotransferase [Bacillus
amyloliquefaciens DSM 7]
Length = 451
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L+ L ++ ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|154686803|ref|YP_001421964.1| YqeV [Bacillus amyloliquefaciens FZB42]
gi|154352654|gb|ABS74733.1| YqeV [Bacillus amyloliquefaciens FZB42]
Length = 451
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L+ L ++ ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|302865999|ref|YP_003834636.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca
ATCC 27029]
gi|302568858|gb|ADL45060.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca
ATCC 27029]
Length = 500
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%)
Query: 81 NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131
+ H+P + HR LKL C C FC FR V +L+ +
Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228
Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
A K+ + E++ G D + + L+K+L L I + +R
Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275
Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229
+ P P L++ + G Y + H E + + R
Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318
>gi|268608005|ref|ZP_06141736.1| hypothetical protein RflaF_00715 [Ruminococcus flavefaciens FD-1]
Length = 224
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 41/171 (23%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ L+ C C FCF +M + T+ D +A L+++Q V T
Sbjct: 75 ETFLMDNKQSCSNKCVFCFIDQMPKGMRETLYFKDD-DARLSFLQGN----YVTLT---- 125
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L + ++++ I + H+ +P+ V + H
Sbjct: 126 -NLKQSDIDRIIEMKLNI----NVSVHT----TNPE--------------LRVKMM-H-- 159
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
F+ E + I +LA GI L Q V G+ND L R+ +L
Sbjct: 160 --NRFAGEKLKFIWQLAENGIKLNCQIVCCPGLNDG----DELRRSLTDLG 204
>gi|187934049|ref|YP_001885400.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B]
gi|187722202|gb|ACD23423.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B]
Length = 444
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 52/160 (32%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF ++ + T+ D
Sbjct: 80 LMDKAKRCSNKCIFCFIDQLPPGMRDTLYFKDD--------------------------- 112
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
RL + + +++ ++ + +K P+ +++H +P
Sbjct: 113 -DSRLSFLQGNFVTLTNMK----------------EEDIDRIIKYHISPINVSVHTTNPE 155
Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
F+ + + RL +AGII+ SQ V + GIN+
Sbjct: 156 LRVKMLNNRFAGNILERLKRLTDAGIIINSQVVCIPGINN 195
>gi|157693043|ref|YP_001487505.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
gi|157681801|gb|ABV62945.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
Length = 453
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVINQAQQLVDAGYKEIVLTG 197
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D L K+LK L + ++ +R S ++ +I E+I+ L ++
Sbjct: 198 IHTGGYGED---LKDYNFAKLLKELDERVNGLKRIRISS----IEASQITDEVIEVLDQS 250
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 251 DK-IVRHLHI 259
>gi|325960201|ref|YP_004291667.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325331633|gb|ADZ10695.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 349
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151
P+ + + + + C C +C+R+ S+ G+ +S +D + L + ++++ G
Sbjct: 36 PELVDISISNYCTNDCDYCYRQ---SSETGSFMSIEDFQTCLEQLNNTKFGSVFQIALGG 92
Query: 152 GDPLILSH-KRLQKVLKTLRYIKH 174
G+PL+ ++ ++ + I +
Sbjct: 93 GEPLLHPDFSKMLRLTREYNIIPN 116
>gi|153815340|ref|ZP_01968008.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
gi|145847402|gb|EDK24320.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
Length = 442
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C +C +C + + S+ T+ L ++ + EV+ TG
Sbjct: 154 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 208
Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LS + L ++K + ++ ++ +R S ++P I E + L E
Sbjct: 209 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 261
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 262 PK---VCPHF 268
>gi|147919913|ref|YP_686334.1| hypothetical protein RCIX1817 [uncultured methanogenic archaeon
RC-I]
gi|110621730|emb|CAJ37008.1| conserved hypothetical protein (MiaB/NifB-like) [uncultured
methanogenic archaeon RC-I]
Length = 422
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P RI L L + C C C+ G ++ LS+K+ + + +K ++ ++FTG
Sbjct: 114 KSPLRIDLALTYRCNNNCGHCYAG---GPRQTKELSTKEWKQIIDK-AQKFEVPNIVFTG 169
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G+ L+ L++++ + V I + + + E + LK+AG
Sbjct: 170 GESLLRED--LEELIAQAEKLGIVT-------GLITNGRLLTKERVAKLKKAGL 214
>gi|117918731|ref|YP_867923.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3]
gi|117611063|gb|ABK46517.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. ANA-3]
Length = 337
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + K LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179
>gi|320352978|ref|YP_004194317.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320121480|gb|ADW17026.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 350
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 65/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I ++ C + C C + S + + L I + V+ +GG+
Sbjct: 5 PKWIAWEITRRCNLRCVHCRSSSQLEIDGHPDFSLTEAKRVLNEIHAYANP-VVVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
PL+ + + LR + + E + +K++G + V +++
Sbjct: 64 PLLRPD------VFEIAAHGTSLGLRIC---LATNGSLVTAETCRDIKQSGIRMVSLSLD 114
Query: 213 ANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ E ++ AI I L S K + +
Sbjct: 115 GSTA-EVHDDFRNQPGAFAGVMNAIRLFNEHQIDFLINSSFTK---RNKAEAPKIYHLVK 170
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
L +YL + G++I+ L
Sbjct: 171 SLGATAWYLFM----------IVPTGRGEEIMEELI 196
>gi|313157725|gb|EFR57136.1| tRNA methylthiotransferase YqeV [Alistipes sp. HGB5]
Length = 432
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 7/120 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C C +C G + ++ EA + +I GD
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGGSRNMPIADLVAEARQIAAAGQKEIVITGINTGD 201
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ +R +L+ L ++ ++ R S ++P + E+I + K H
Sbjct: 202 FGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCAASPK---FQHHF 254
>gi|306821367|ref|ZP_07454975.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550585|gb|EFM38568.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 296
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%)
Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
+G+V+R P ++++ C C FC M + + S KD + Y +
Sbjct: 4 EGMVYRPPSEAYSLIVQVTTGCSQNTCTFC---AMYKEARFKIRSLKDIKEDFLYAKAHY 60
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRI---NPELI 197
I + GD LI+ + L ++LK + + ++ + P+ I E +
Sbjct: 61 RGIDRIFLADGDALIMPFEDLLEILKFIEELFPNLDRV-----SLYASPRSILSKTKEQL 115
Query: 198 QCLKEAGKPVY 208
+ L+ +
Sbjct: 116 ETLRAHNLKLA 126
>gi|299535792|ref|ZP_07049113.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
gi|298728992|gb|EFI69546.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
Length = 444
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
R LK+ C +C FC G + + + Y++
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 201
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L L ++L+ L +K ++ LR S ++ ++ E+I+ L+E+ K V
Sbjct: 202 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIEVLRES-KIVV 253
Query: 209 IAIHA 213
+H
Sbjct: 254 NHLHI 258
>gi|298479623|ref|ZP_06997823.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D22]
gi|298274013|gb|EFI15574.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides sp. D22]
Length = 152
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C C E G L+ + ++ + I+ + V F+GGDP L
Sbjct: 25 GCSHHCPGCHNPESWNPGVGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83
>gi|297195245|ref|ZP_06912643.1| radical SAM domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|297152723|gb|EDY63581.2| radical SAM domain-containing protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 729
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147
I++K+ C + C C+ E Q ++ A+++ + E ++ V
Sbjct: 12 IVVKVHSRCDLACDHCYIYEHA-DQSWRTRPKAISDEAISWTALRLAEHAKSHALPSVSV 70
Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204
I GG+PL+ +RL++V + ++ V LR H+ R+N + E
Sbjct: 71 ILHGGEPLLAGPERLRRVCEEFTAALEPVAALDLRIHTNGI-----RLNDRFLDLFDEFD 125
Query: 205 KPVYIAI 211
V I++
Sbjct: 126 VRVGISL 132
>gi|260885593|ref|ZP_05735307.2| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
gi|260851662|gb|EEX71531.1| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
Length = 524
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 15/124 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C YC +C R +++ + AA + +I
Sbjct: 237 RTRYFLKVQDGCNYYCTYCTIPLARGRSRNGTIASLVGQAEAVAA----EGGKEIVLTGV 292
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + ++++ L +K ++ R S ++P + E+I ++
Sbjct: 293 NTGDFGRSTGETFFQLIQALDRVKGIERYRISS----IEPNLLTDEIIDFCAQSR---AF 345
Query: 210 AIHA 213
H
Sbjct: 346 MPHF 349
>gi|288573974|ref|ZP_06392331.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569715|gb|EFC91272.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 341
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 47/211 (22%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREM-------VGSQKGTVLSSKDTEAALAYIQEK 141
+ H L CP+ C FC VG G L+ + + +
Sbjct: 97 MDHGNHHTACLSTQVGCPLRCDFCATGRQGFVRNLTVGEIVGHFLAMESW------LGQD 150
Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPEL 196
I ++F G G+PL L+ + ++K ++ L + K ++ + + + P
Sbjct: 151 --IKNIVFMGMGEPL-LNWENVKKAIEILNHPKMRGMGIRRITISTSGVV--PG------ 199
Query: 197 IQCLKEAGKPVYIAIHANHPY-EFS------------EEAIAAISRL-ANAGIILLSQSV 242
I L ++G V ++ + P + + + A+ G + + V
Sbjct: 200 ILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQVVEALQEFQKKTGNRITVEYV 259
Query: 243 LLKGINDDP----EILANLMRTFVELRIKPY 269
LLK IND+P EI A L V + + PY
Sbjct: 260 LLKRINDEPSMAYEIAALLSDLDVYINLIPY 290
>gi|215488780|ref|YP_002331211.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
E2348/69]
gi|312968176|ref|ZP_07782386.1| radical SAM superfamily protein [Escherichia coli 2362-75]
gi|215266852|emb|CAS11293.1| putative coproporphyrinogen oxidase [Escherichia coli O127:H6 str.
E2348/69]
gi|312287001|gb|EFR14911.1| radical SAM superfamily protein [Escherichia coli 2362-75]
Length = 445
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|171186343|ref|YP_001795262.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170935555|gb|ACB40816.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 368
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
H P + + CP+ C+ C R + + L++++ + + + ++
Sbjct: 12 HSAPLIVFWESTKACPLACKHC-RADAILRPLPGELNTEEGKRLIEQVASFGDPKPLLVI 70
Query: 150 TGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TGGDPL+ + L ++ + S P V P ++PE ++ ++E G
Sbjct: 71 TGGDPLMRND--LFDLVDYAVQLGVPT-------SLAPAVSPN-LSPETLKAIREHGVK- 119
Query: 208 YIAIHANHPYEFSEE-----------AIAAISRLANAGIILLSQSVLLK 245
I+I + E + + +AAI +AG+ + +V+ +
Sbjct: 120 AISISLDGAREETHDEIRGVPGSFRNTLAAIKAAVDAGVQVQVNTVVWR 168
>gi|91213008|ref|YP_542994.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
gi|117625785|ref|YP_859108.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
gi|218560578|ref|YP_002393491.1| coproporphyrinogen III oxidase [Escherichia coli S88]
gi|237703269|ref|ZP_04533750.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
gi|331659808|ref|ZP_08360746.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA206]
gi|91074582|gb|ABE09463.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli UTI89]
gi|115514909|gb|ABJ02984.1| putative oxygen independent coproporphyrinogen III oxidase ChuW
[Escherichia coli APEC O1]
gi|218367347|emb|CAR05126.1| putative oxygen independent coproporphyrinogen III oxidase
(chuW-like) [Escherichia coli S88]
gi|226902533|gb|EEH88792.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
gi|294491802|gb|ADE90558.1| HugW [Escherichia coli IHE3034]
gi|307628582|gb|ADN72886.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
gi|315286173|gb|EFU45609.1| radical SAM domain protein [Escherichia coli MS 110-3]
gi|323950177|gb|EGB46060.1| HemN protein [Escherichia coli H252]
gi|323954735|gb|EGB50516.1| HemN protein [Escherichia coli H263]
gi|324009284|gb|EGB78503.1| radical SAM domain protein [Escherichia coli MS 57-2]
gi|331053023|gb|EGI25056.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA206]
Length = 445
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|148264465|ref|YP_001231171.1| molybdenum cofactor biosynthesis protein A [Geobacter
uraniireducens Rf4]
gi|146397965|gb|ABQ26598.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4]
Length = 326
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 32/169 (18%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLI 156
L + C + C +C E + Q G +LS +D A + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNLRCSYCMPAEGIPKLQHGEMLSYEDLYRVACESVAL--GIEKIRVTGGEPLV 73
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANH 215
K L + + L I ++ L + + EL L++AG + I++
Sbjct: 74 --RKGLVQFIGRLADIPGLKELVLTTNGL------LLGELAIPLRQAGAQRLNISL---- 121
Query: 216 PYEFSEEAIAAISR---LANA--GI---------ILLSQSVLLKGINDD 250
E A I+R L GI + V++KGINDD
Sbjct: 122 -DSLKPETFARITRGGDLRKVVDGIAAAEEAGFPPVKINMVVMKGINDD 169
>gi|310659093|ref|YP_003936814.1| hypothetical protein CLOST_1789 [Clostridium sticklandii DSM 519]
gi|308825871|emb|CBH21909.1| conserved protein of unknown function [Clostridium sticklandii]
Length = 454
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + ++ D + + + + EV+ TG
Sbjct: 162 KTRAFLKIQEGCDRFCSYCIIPYTRGPVRSRSIN--DIISEVKSLAKN-GYKEVVLTGIH 218
Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L RL V+K + I + +R S V+P I + + LKE K
Sbjct: 219 VASYGKDLGDIRLIDVIKAINNIDGIHRIRTSS----VEPLIITDDFLSELKEIDK---F 271
Query: 210 AIHA 213
H
Sbjct: 272 CPHF 275
>gi|302389502|ref|YP_003825323.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200130|gb|ADL07700.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
Length = 463
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMV 118
I +EL+ L + + L+G+ + + L L + H C + C++CF +
Sbjct: 59 IIEAIKELDELKARGFLFVEADLTRALEGLRQKKNVKALCLNVAHDCNLRCKYCFASKGH 118
Query: 119 GSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
+ + ++ K ++A+ ++ E S + EV F GG+PL+ ++ V+ R ++
Sbjct: 119 YNGERRLMDKKVAQSAVDFLIEHSGNLKNLEVDFFGGEPLMAFD-TIKYVISYARSLEDR 177
Query: 176 QILRFH 181
RFH
Sbjct: 178 CGKRFH 183
>gi|291297888|ref|YP_003509166.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
nassauensis DSM 44728]
gi|290567108|gb|ADD40073.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
nassauensis DSM 44728]
Length = 341
Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 33/192 (17%)
Query: 89 IVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+V RY + + L C + C +C E + + +L+ + + + +
Sbjct: 15 LVDRYGRTAVDLRVSLTDRCNLRCTYCMPAEGLAWLPRQEILTDDEIVRLVGLAVTRLGV 74
Query: 145 WEVIFTGGDPLILSHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQRINPELIQC 199
+V FTGG+PL+ L ++ L V + + R+ P
Sbjct: 75 TQVRFTGGEPLLRPA--LADIVARTTALEPRPRVSLTTNAIGLK-------RMAP----A 121
Query: 200 LKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAG-IILLSQSVLLKGIND 249
L+EAG V I++ P F + + I+ AG + + SVL++G+N+
Sbjct: 122 LREAGLDRVNISLDTLDPARFKTLAHRDRLNDTVEGIAAAKAAGLVPVKVNSVLMRGVNE 181
Query: 250 DPEILANLMRTF 261
D E + L
Sbjct: 182 D-EAVPLLRFAL 192
>gi|310658965|ref|YP_003936686.1| molybdopterin biosynthesis protein a [Clostridium sticklandii DSM
519]
gi|308825743|emb|CBH21781.1| molybdopterin biosynthesis protein A [Clostridium sticklandii]
Length = 316
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 63/163 (38%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + +C C +C + +L ++ E + ++ I ++ TGG+PL+
Sbjct: 14 ISVTDLCNFNCEYCMPEGIEKKDHSDILRIEEIENICK-VAARNGIKKIRLTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
K + ++ ++ I + + + + E+ + LK AG I + + E
Sbjct: 71 RKGILSLINKIKSIDEITEVAITTNGV------LLDEMAKDLKAAGLD-RINLSLDSMDE 123
Query: 219 -----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ E + +AG + +VL+ +ND+
Sbjct: 124 NVFRKITRGHELSEVYKGLESALDAGFENIKINTVLINKVNDN 166
>gi|331674993|ref|ZP_08375750.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA280]
gi|331067902|gb|EGI39300.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA280]
Length = 445
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
Length = 463
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFT 150
PD ++L L C + C++C+ + S G ++ + + A+ +I E + + + +IF
Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPG-IMKYEIGKKAIDFIAEFCGEKEQFNIIFF 161
Query: 151 GGDPLILSHKRLQKVLK 167
GG+PL + ++L+K+++
Sbjct: 162 GGEPL-MDFRKLKKLVE 177
>gi|117924283|ref|YP_864900.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
gi|117608039|gb|ABK43494.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
Length = 467
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 21/169 (12%)
Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
P P+ + + E LP E P+ + KG R +++ + C C F
Sbjct: 136 PRTPLRQSGLEPLAEEAPLPRWEEGPLVAADA--FKG-----QARAFVQVQNGCDKRCTF 188
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR------LQKV 165
C + G + A +++Q E++ TG D ++ L ++
Sbjct: 189 CVIPALRGPSRSQSPQWV-MAQAQSFLQA--GYQELVLTGIDLGSYGREQTGQGWSLARL 245
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++ L + + LR S +DP + P LI + A K + +H +
Sbjct: 246 VEQLLSLDGLARLRLSS----IDPMDMEPALIALMGRAPK-LCPHLHLS 289
>gi|330995923|ref|ZP_08319818.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
11841]
gi|329574262|gb|EGG55837.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 30/189 (15%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGI-VHRY--------PDRILLKLLHVCP 106
I R +E L +LP ER+ ++ + +H + R LK+ C
Sbjct: 113 ILRY---LEERLPLLPAERKSADAEHAAYTVPTKDIHTFVPSCSCGDRTRYFLKVQDGCD 169
Query: 107 VYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKR 161
YC +C G + ++S + E A E++ TG GD + +
Sbjct: 170 YYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGES 224
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFS 220
++K L ++ + R S ++P + +++ E+ H + P S
Sbjct: 225 FLDLVKALDRVEGIARYRISS----IEPNLLTEDVLAFCAESR---AFMPHFHIPLQSGS 277
Query: 221 EEAIAAISR 229
+E + + R
Sbjct: 278 DEVLKLMRR 286
>gi|320101749|ref|YP_004177340.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC
43644]
gi|319749031|gb|ADV60791.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC
43644]
Length = 400
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 45/206 (21%)
Query: 94 PDRILLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ + C + C FC R VG +L ++D + E ++
Sbjct: 129 RRTVCVSSQVGCGMGCVFCASGLKGVERNLTVGEITEELLHARDL------LPEHERLTN 182
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQC 199
++ G + S L+ ++ L I + + + + P++I + +
Sbjct: 183 IVVMG---MGESLANLENLIAALDRICSPSGLGLSQRAVTIST---VGLPEKI--KRLAA 234
Query: 200 LKEAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
L + + +++H NH AA A G + + VLL GI
Sbjct: 235 L-DRRYHLAVSLHAPTEELRDQLVPINHKVGLRAVMEAADHYFAVTGRQVTFEYVLLGGI 293
Query: 248 NDDPEILANLMRTF--VELRI--KPY 269
ND +L+ + + PY
Sbjct: 294 NDRDRDARDLVALLAGRKAHVNLIPY 319
>gi|168334360|ref|ZP_02692544.1| molybdopterin cofactor biosynthesis protein A, putative
[Epulopiscium sp. 'N.t. morphotype B']
Length = 299
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 101 LLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C VG+ K L+ + E +A I I +V TGG+PLI S
Sbjct: 1 MTNRCNLKCIYC-----VGADKFEAKYLTIDEIER-VANIFATLGITKVKLTGGEPLIRS 54
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L ++K LR V+ + + + + + L AG I + +
Sbjct: 55 D--LANIVKRLRSAGMVE-VTLTTNGL------LLEQKLTTLIAAGVT-AINVSLDAIDG 104
Query: 219 FSEEA---IAAISRLANA------GIILLSQSVLLKGINDD 250
+ EA +AA++++ A + S+L+KG ND
Sbjct: 105 ATFEALTGVAAVNKVMQAVEASAKVVPTKINSLLIKGTNDS 145
>gi|289423981|ref|ZP_06425773.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
gi|289155617|gb|EFD04290.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
Length = 380
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 13/117 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ CP C FC ++++ G + +L I + +++ F G
Sbjct: 8 IFVPHQGCPHDCIFCNQKKITGLSTSMTDEDARDIIIESLKTIPDDAEVEIAFFGGS--F 65
Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
++L V K + + V +R +R P I+ + LKE G +
Sbjct: 66 TAIDTDIQRKLLSVAKDFKDMGKVDDIRLSTR-----PDCIDDRELDLLKEYGVTII 117
>gi|218691787|ref|YP_002399999.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
gi|218429351|emb|CAR10315.2| putative oxygen independent coproporphyrinogen III oxidase
(chuW-like) [Escherichia coli ED1a]
Length = 445
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|218702268|ref|YP_002409897.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
gi|218372254|emb|CAR20116.1| putative oxygen independent coproporphyrinogen III oxidase
(chuW-like) [Escherichia coli IAI39]
Length = 445
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|319651610|ref|ZP_08005737.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
gi|317396677|gb|EFV77388.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIRQAQQLVDA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L +L+ L +K ++ LR S ++ +I E+I+ + ++ K
Sbjct: 199 TGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDQS-K 250
Query: 206 PVYIAIHA 213
V +H
Sbjct: 251 VVVRHLHI 258
>gi|307298742|ref|ZP_07578545.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915907|gb|EFN46291.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 425
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R L + C C +C R + K L ++ E ++ E++
Sbjct: 132 RTRAFLGIEDGCLNCCSYC-RVRLARGSKIISKPIDLVKREFEGLVS-----RGYREIVL 185
Query: 150 TGGDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L K+L L ++ +R S +DP R++ EL+ + + +
Sbjct: 186 TGINIGYYGFDLDSSLVKLLIELDKLEGEWRIRLGS----LDPDRVDGELLHLITTSRR- 240
Query: 207 VYIAIHAN 214
+ +H +
Sbjct: 241 MARHLHLS 248
>gi|291529131|emb|CBK94717.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale M104/1]
Length = 434
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)
Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
L E D + D G H + R +K+ C +C +C G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
+ ++ A + + EV+ TG LS L ++++ +
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+K ++ +R S ++P+ + L + K I H
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256
>gi|291525036|emb|CBK90623.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale DSM 17629]
Length = 434
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)
Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
L E D + D G H + R +K+ C +C +C G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
+ ++ A + + EV+ TG LS L ++++ +
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+K ++ +R S ++P+ + L + K I H
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256
>gi|269957895|ref|YP_003327684.1| Radical SAM domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269306576|gb|ACZ32126.1| Radical SAM domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 376
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIF 149
R P + +L C + CR C R E V L+++ A L IQ + V+
Sbjct: 25 QRSPMIVYWELTTACGLACRHC-RAEAVRQPLPGELTTRQALAVLDQIQGFGDPLPHVVM 83
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQRINPELIQCLKEAGKP 206
TGGDPL + L ++ R S P V P +N + ++ L+E+G
Sbjct: 84 TGGDPLRRAD--LDLLIDAATE-------RGIGVSLAPAVTP-LLNRDRLEGLRESGVQ 132
>gi|154685441|ref|YP_001420602.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
gi|154351292|gb|ABS73371.1| HemZ [Bacillus amyloliquefaciens FZB42]
Length = 500
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 45/233 (19%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
I D + + + + + + CP C +C + + S
Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+ +++ ++ + F GG P ++ + + + + + R V +R + V P
Sbjct: 214 QKIGEWLKRHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVANIREIT-VEAGRP 272
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I E + L + + I P + E + AI R +V
Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312
Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
E + L R I + DL GT+ FR ++EE +K++
Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLEETEKLM 357
>gi|153873510|ref|ZP_02002070.1| radical SAM family protein [Beggiatoa sp. PS]
gi|152070023|gb|EDN67929.1| radical SAM family protein [Beggiatoa sp. PS]
Length = 356
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 36/168 (21%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEV 147
YP +++ + C + C++CF Q+ + + LA I+E +S+I
Sbjct: 9 YPSVVVVNITTACNLRCKYCFADCEPSQQREDMTE----DVMLAIIREMLVLPESEIITF 64
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
F GG+P L+ +++ + + K V+ R S + I ELI LK+
Sbjct: 65 EFQGGEP-TLNIVGIERFISIAEQLKTSSNKTVKY-RIESNGTV-----ITDELITLLKK 117
Query: 203 AGKPVYIAIHANHPYEFSEEAI-------------AAISRLANAGIIL 237
+ I I + P + + A I +L GI +
Sbjct: 118 Y--NMEIGISIDGPMDMTNNARVYEDGTGAFTDIENGIKKLHENGIKV 163
>gi|28804570|dbj|BAC57983.1| hypothetical protein [Leptospira interrogans]
Length = 264
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112
I R+ P EL+ E D + + S ++ Y +K+ C C FC
Sbjct: 93 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 146
Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165
FR + V S +L +DT A+ +I + ++ G D + L +
Sbjct: 147 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 197
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ + I ++ILR + P + +LI+ + E K
Sbjct: 198 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 233
>gi|194334092|ref|YP_002015952.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
DSM 271]
gi|194311910|gb|ACF46305.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
Length = 346
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 65/163 (39%), Gaps = 25/163 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++L + C + C +C+ E G +S + E A+ + + + + +GG+PL+
Sbjct: 9 LILVVTRSCNLSCVYCY--ENACRHDGAAMSLQTAEQAVGLVAASGKPFHIQLSGGEPLL 66
Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
++++ + I + + + ++ E+I+ L G + +++ +
Sbjct: 67 APDTIFAVMELIRK-KGIP--AFVSLQTNGVL-----LDREMIRSLNGYGVSIGLSL--D 116
Query: 215 HPYEFSEEAI-------AAISRLANAGIILLSQSVLLKGINDD 250
P EE A+ L + G+ +V ++D
Sbjct: 117 GPPRLQEELRGGSAATYRALRLLEDEGVPFRVTTV----VSDC 155
>gi|110638137|ref|YP_678346.1| 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|110280818|gb|ABG59004.1| possible 2-methylthioadenine synthetase [Cytophaga hutchinsonii
ATCC 33406]
Length = 438
Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 35/160 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C FC GS + ++ + I + E++ TG
Sbjct: 140 RTRTFLKVQDGCDYSCSFCTIPLARGSSRSDTIA--NIVKTAKEIAA-KDVKEIVLTGVN 196
Query: 152 -GDPLILS----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
GD I+S L ++K L ++ ++ R S ++P + E+I + + +
Sbjct: 197 IGDYGIISGTRTTSFLD-LIKELDKVEGIERFRISS----IEPNLLTDEIISFVSTSRR- 250
Query: 207 VYIAIHANHP-----------------YEFSEEAIAAISR 229
H + P E E + AI +
Sbjct: 251 --FVPHFHIPLQSGNDKILKLMRRRYKRELYAERVEAIKK 288
>gi|296328080|ref|ZP_06870614.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154856|gb|EFG95639.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 348
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
++ + + CP C FC ++++ G + +S D + + Y++ I +V
Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59
Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G
Sbjct: 60 FFGG-TFTGISINLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113
Query: 205 KPVY 208
Sbjct: 114 VKTI 117
>gi|168700820|ref|ZP_02733097.1| Radical SAM [Gemmata obscuriglobus UQM 2246]
Length = 277
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 30/176 (17%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYI 138
SP G + R C C +C+ + ++ G +++K AALA
Sbjct: 11 SPATGFIRRGGFEWTCNPYVGCTFGCTYCYAAFLPQNRRPANEWGKWITAKKNAAALAEK 70
Query: 139 QEKSQIWEVIF--TGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
Q + ++ + DP L+L+ L+ +L H L +R P+V
Sbjct: 71 QATKVAGQPVYLSSVTDPYQPAERSLMLTRGILEALL------PHQPRLTIQTRGPLVV- 123
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPY-EFSEEAI------AAISRLANAGIILL 238
R + ++++ + V I + +F +A A+ +L +AG+ +
Sbjct: 124 -R-DIDVLKDFRSLRVNVSIPTDSERVRQQFEPKAPPLEGRWDAVQQLKDAGVSVG 177
>gi|187924899|ref|YP_001896541.1| molybdenum cofactor biosynthesis protein A [Burkholderia
phytofirmans PsJN]
gi|187716093|gb|ACD17317.1| molybdenum cofactor biosynthesis protein A [Burkholderia
phytofirmans PsJN]
Length = 369
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLAQL 116
>gi|295677201|ref|YP_003605725.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1002]
gi|295437044|gb|ADG16214.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1002]
Length = 369
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQQFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ ++ L +
Sbjct: 100 PLL--RKNLEFLIDRLARL 116
>gi|206890348|ref|YP_002249124.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742286|gb|ACI21343.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 405
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR----------REMVGSQKGTVLSSKDT 131
SP+ + RY + L++ + C + C+ CF V K LS +
Sbjct: 87 EQSPIPSL--RYLE---LQITNRCNLRCKHCFVNSGTCQKKKFSHFVDIDKSQELSFEKI 141
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLR 170
+ L ++ + V+ TGG+PL+ S K++ +K L
Sbjct: 142 KKTLKEFEKMQGLR-VLITGGEPLLHSEFKKINNFIKDLA 180
>gi|170680480|ref|YP_001745771.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
gi|170518198|gb|ACB16376.1| putative coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
Length = 445
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|157960282|ref|YP_001500316.1| radical SAM domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845282|gb|ABV85781.1| Radical SAM domain protein [Shewanella pealeana ATCC 700345]
Length = 294
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 48/233 (20%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC + + K + ++ ++ I V GD +
Sbjct: 18 LILQVTNGCSWNQCSFCDMYTQPQKRFRAQKADKIEQDLISVANSQAHISRVFLADGDAM 77
Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
L RL+ + ++ + +V +R+ P+ I PE +Q L+E G +
Sbjct: 78 TLPFARLEAICLLIKKYLPNV------TRISSYCLPRNINNKTPEQLQRLRELGLSLLYI 131
Query: 211 IHANHPYEFSEEAIA---------AISRLANAGI----ILLSQSVLLKGIN---DDPEIL 254
+ E E A+ ++ AGI ++L+ L G+ E
Sbjct: 132 GCESGDDEVLERIKKGETFDSSLAALQKIKAAGIKASVMILN---GLAGVELSKQHAENS 188
Query: 255 ANLMRTFVELRIKPYYLHHPDLA--AGTS--------HFRLTIEEGQKIVASL 297
A LM +P YL + GT HF+L + ++ +
Sbjct: 189 AKLMNA-----AQPEYLSTLVVTLPLGTERMDEAFGGHFQLPNQ--AQLFEEM 234
>gi|331089440|ref|ZP_08338339.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 3_1_46FAA]
gi|330404808|gb|EGG84346.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 440
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C +C +C + +V + + A + E+ ++ L
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
K L ++++ L I ++ +R P+ I ELI+ +K+ K
Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252
>gi|304384048|ref|ZP_07366503.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
gi|304334836|gb|EFM01111.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
Length = 443
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C + E A + E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGRSRNPSIESLVEQAET--AARQGGKEIVLTGVN 209
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
S L +++KTL ++ +Q R S ++P ++ ELI E+
Sbjct: 210 IGEFSTAEGLGLLELVKTLDCVEGIQRFRISS----IEPDLLDDELIAYCAESR---AFM 262
Query: 211 IHA 213
H
Sbjct: 263 PHF 265
>gi|210622624|ref|ZP_03293284.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
gi|210154125|gb|EEA85131.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
Length = 445
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 26/126 (20%)
Query: 92 RYPDR----ILLKLLHVCPVYCRFC--------FRREMVGS--QKGTVLSSKDTEAALAY 137
RY LK+ C +C +C +R + ++ L+++ + +
Sbjct: 138 RYVSTPEHMAYLKIGEGCSNHCTYCIIPKLRGKYRSRKIEDIVEEAKTLAAEGVKELVV- 196
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
I + + G D + +L ++L+ L I+ ++ +R P+ I +LI
Sbjct: 197 IAQ-----DTTRYGED--LYGEAKLAELLEELAGIEGIKWIRI----MYSYPESITEKLI 245
Query: 198 QCLKEA 203
+
Sbjct: 246 DVIAAH 251
>gi|317500459|ref|ZP_07958683.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|316898214|gb|EFV20261.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
8_1_57FAA]
Length = 440
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C +C +C + +V + + A + E+ ++ L
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
K L ++++ L I ++ +R P+ I ELI+ +K+ K
Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252
>gi|281180540|dbj|BAI56870.1| putative coproporphyrinogen oxidase [Escherichia coli SE15]
Length = 445
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|7963892|gb|AAF71374.1|AF262989_1 iron-sulfur modifier protein [Klebsiella pneumoniae]
Length = 395
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 36/233 (15%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAA 134
P+ SP+ +H IL+K C + CR+C+ + + E
Sbjct: 13 PLAAEPRSPVP--LH-----ILMKPIGPACNLACRYCY---YPQDETPVNKMDDARLEQF 62
Query: 135 L-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVD 188
+ YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 63 IRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTN 118
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V-- 242
IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 119 GTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGF 178
Query: 243 -LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 179 NLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|297569896|ref|YP_003691240.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925811|gb|ADH86621.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 355
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + +++ S + + L I + V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKEHPDFSFDEAKRILDDIASYASP-VVVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL L+ + + + LR + +N ++ + LKEAG +
Sbjct: 64 PL------LRDDVFEIAAYGTGKGLRMC---LATNGTLVNEQVCRRLKEAGIRMVSLSLD 114
Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+ + N P F I A I L S K + + + R
Sbjct: 115 GADATVHDNFRNQPGAFDG-TINAARLFKEHDIPFLINSSFTK---RNQAEIPKVYRLAK 170
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
EL K +Y+ + G+ I+A L
Sbjct: 171 ELGAKAWYMFM----------IVPTGRGEDIMAELI 196
>gi|196232689|ref|ZP_03131540.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
gi|196223149|gb|EDY17668.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
Length = 368
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+VC VYC+FC + VLS + + L + + ++ G P +
Sbjct: 76 TNVCNVYCKFCAFYRTEKDEDHYVLSHEQLDQKLDELSAIGGVQILLQGGHHPKL----D 131
Query: 162 LQKVLKTLRYI----KHVQI 177
+ L L +I H+ I
Sbjct: 132 IDWYLAMLSHIREKYPHINI 151
>gi|7963896|gb|AAF71376.1|AF262990_1 iron-sulfur modifier protein [Klebsiella pneumoniae]
Length = 395
Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
P+ SP+ + P + C + CR+C+ + + E +
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63
Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGFN 179
Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|289422296|ref|ZP_06424147.1| putative oxygen-independent coproporphyrinogen III oxidase
[Peptostreptococcus anaerobius 653-L]
gi|289157301|gb|EFD05915.1| putative oxygen-independent coproporphyrinogen III oxidase
[Peptostreptococcus anaerobius 653-L]
Length = 378
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGD 153
++ + + C C +C VG + E + Y+ +K I+ + GG
Sbjct: 4 NKAIYIHIPFCAKKCYYCDFTSYVGRDEEINSYLDSLEKEMDLYMDKKEDIYSIFIGGGT 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAGKP 206
P +LS +L ++ + +++ L S +P + + ++ +K+ G
Sbjct: 64 PSLLSPDQLDRLFGIIEKKVNLESLCEYTIES-----NPGTLTRDKLRTMKKHGVN 114
>gi|288555141|ref|YP_003427076.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4]
gi|288546301|gb|ADC50184.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4]
Length = 370
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + T L + + + E + TGG+P +LS
Sbjct: 34 FTTTTLCNMRCEHCAVGYTLQHKDPTPLP---LDLLIMRLDEIPHLKAFSITGGEP-MLS 89
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
K + + + L H + +R +IN L LK K P +H +H
Sbjct: 90 MKSVDQYVVPLLKYAHERGVR----------TQINSNLTLDLKRYEKIIPYLDVLHISH 138
>gi|260892512|ref|YP_003238609.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
gi|260864653|gb|ACX51759.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
Length = 437
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R LK+ C +C +C V + +AA ++QE E++ TG
Sbjct: 147 RTRAFLKVQEGCRDFCTYCI-VPYVRGPCRSRPLEAVLKAARRFLQE--GFVELVLTGTH 203
Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
D + L +++ L ++ LR S ++P + +LI+ ++
Sbjct: 204 LGLYGQD--LTPSLTLAHLVERLLEFPELKRLRLSS----IEPLEVTADLIELMRR 253
>gi|163783641|ref|ZP_02178630.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
128-5-R1-1]
gi|159881134|gb|EDP74649.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
128-5-R1-1]
Length = 209
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ + C CR C +V ++ ++ ++ L + I ++ +GG+P +
Sbjct: 21 LVLFMKGCNFRCRHCHNWRLVVGEEKEEITEREV---LYEVSSNPVIDTLVLSGGEPTVH 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
+ K+L + ++ + +R +
Sbjct: 78 NPKKLMDFILRVKSRNPLIKIRVDT 102
>gi|324326187|gb|ADY21447.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 337
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G+ + +LS + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFIGM-GVEKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++
Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKTLKEAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I G+ + V+ KG+ND
Sbjct: 129 AIEDHVFQTINGRNVSTKPVLKGIEAAKAIGLEVKVNMVVKKGMNDS 175
>gi|238619042|ref|YP_002913867.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
gi|238380111|gb|ACR41199.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
Length = 394
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119
I+PE +D I + + + + R P +L L L + C C +CF++ G
Sbjct: 37 IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
+K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 92 FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
>gi|227826907|ref|YP_002828686.1| radical SAM protein [Sulfolobus islandicus M.14.25]
gi|227458702|gb|ACP37388.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25]
Length = 394
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119
I+PE +D I + + + + R P +L L L + C C +CF++ G
Sbjct: 37 IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
+K +S K + YI++ + +V T GG+PL L ++++++ + L +K
Sbjct: 92 FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146
>gi|168335412|ref|ZP_02693503.1| MiaB-like tRNA modifying enzyme YliG [Epulopiscium sp. 'N.t.
morphotype B']
Length = 446
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+K+ C +C +C + G + + K E + + E + E+I + +
Sbjct: 149 AYIKIAEGCNSHCTYCIIPSLRGQYR-SRPKEKIVEEVMQ-LAED-GVSEIILVAQNTTM 205
Query: 157 LSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ L +L+ L I ++ +R P+ I ELI+ +K
Sbjct: 206 YGIDKGYTLTNLLQELSDIDGIEWIRI----LYCYPENITDELIEEIK 249
>gi|257063746|ref|YP_003143418.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
20476]
gi|256791399|gb|ACV22069.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
20476]
Length = 409
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 9/122 (7%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+P R+ +K+ C C FC + + + A Y + + E++ TG
Sbjct: 139 FPTRVGIKVQDGCNNACTFCI-VHVARGRAWSRPYKDVVAEAGEY--ARRGVREIVLTGI 195
Query: 153 D--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ L ++L L R S V+P ++ + I + + +
Sbjct: 196 NLGAYRTEDADLVRLLDGLLEAAPNTRFRLSS----VEPHTLSDDFIGLMAASDGRICRH 251
Query: 211 IH 212
+H
Sbjct: 252 LH 253
>gi|167770639|ref|ZP_02442692.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
17241]
gi|167667234|gb|EDS11364.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
17241]
Length = 457
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF ++S + AA+ Y+ + S EV GG+PL
Sbjct: 101 LHIAHDCNLRCKYCFADTGEYMGHRELMSPETGRAAIDYLIDHSAGRHNLEVDLFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
++ + +++V++ R ++ H ++ RF
Sbjct: 161 -MNFETVREVVRYARSLEKKHGKLFRF 186
>gi|126652827|ref|ZP_01724972.1| Fe-S oxidoreductase [Bacillus sp. B14905]
gi|126590363|gb|EAZ84483.1| Fe-S oxidoreductase [Bacillus sp. B14905]
Length = 449
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
R LK+ C +C FC G + + + Y++
Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 206
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L L ++L+ L +K ++ LR S ++ ++ E+I L+E+ K V
Sbjct: 207 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 258
Query: 209 IAIHA 213
+H
Sbjct: 259 NHLHI 263
>gi|307244383|ref|ZP_07526494.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
gi|306492202|gb|EFM64244.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
Length = 462
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK---GTVLSSKDTEAALAYIQEKSQIWEVI 148
R P ++LL+L + C + C CF + LS +D + I + ++E++
Sbjct: 122 RSPLKVLLELTYSCNLRCIHCFADADFCCENRMVQNELSYEDWCKIIDNIIKN-DVFEIL 180
Query: 149 FTGGDPLILSHKRLQ 163
+GG+ + ++
Sbjct: 181 LSGGEA-TMRDDLIK 194
>gi|315502559|ref|YP_004081446.1| miab-like tRNA modifying enzyme ylig [Micromonospora sp. L5]
gi|315409178|gb|ADU07295.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora sp. L5]
Length = 500
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%)
Query: 81 NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131
+ H+P + HR LKL C C FC FR V +L+ +
Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228
Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
A K+ + E++ G D + + L+K+L L I + +R
Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275
Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229
+ P P L++ + G Y + H E + + R
Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318
>gi|229829019|ref|ZP_04455088.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM
14600]
gi|229792182|gb|EEP28296.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM
14600]
Length = 449
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 47/210 (22%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL C C FCF + + T+ D + L+++Q V T +
Sbjct: 86 LLDDYRSCSNACLFCFIDQNPPGMRKTIYFKDD-DTRLSFLQGN----YVTLT-----NM 135
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ + +++ ++ + + V +P L+E +H
Sbjct: 136 KEEEIDRLIA--YRMEPINV-----SVQATEP---------LLREK------MLH----N 169
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
F+ + + + +L +A I + Q VL KG+ND + + PY +
Sbjct: 170 RFAGQLMDKLKKLYDAEISMNGQVVLCKGLNDKEHLDRTIKDLLSFY---PYMGTLSVVP 226
Query: 278 AGTSHFRLTI--------EEGQKIVASLKE 299
G + FR + E+ +++V ++
Sbjct: 227 VGLTRFRQGLYPLKPFKKEDAREVVEQIRR 256
>gi|171909566|ref|ZP_02925036.1| hypothetical protein VspiD_00300 [Verrucomicrobium spinosum DSM
4136]
Length = 320
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 17/130 (13%)
Query: 89 IVHRYPDRILLKL------LHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141
+ H R+ L +C CRFC R + +S L + +
Sbjct: 37 LQHDARTRVPLFAKLELSLTGLCNRKCRFCPRSDASFFPNVNEHMSDALLHGMLDELAQA 96
Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQC 199
V +G G+PL+ R+++++ T+ + H +I + + R+ L +
Sbjct: 97 GWKGTVSLSGFGEPLLHP--RIREIVGTIHRVLPHARI------EMVSNGDRLTAGLARD 148
Query: 200 LKEAGKPVYI 209
L +AG V +
Sbjct: 149 LFDAGLHVLV 158
>gi|168184612|ref|ZP_02619276.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|237795842|ref|YP_002863394.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
str. 657]
gi|182672297|gb|EDT84258.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
gi|229260716|gb|ACQ51749.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
str. 657]
Length = 445
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + +K V+ +R P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVKGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITNELIEEIKSNDK 254
>gi|152969099|ref|YP_001334208.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|329998396|ref|ZP_08303095.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3]
gi|150953948|gb|ABR75978.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|328538696|gb|EGF64788.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3]
Length = 395
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 85/234 (36%), Gaps = 38/234 (16%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEA 133
P+ SP+ + P + C + CR+C Q T ++ D E
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYC-----YYPQDETSVNKMDDARLEQ 61
Query: 134 AL-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIV 187
+ YI + +I ++ GG+PL+ +K L RY + S
Sbjct: 62 FIRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQT 117
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V- 242
+ IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 118 NGTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVD 177
Query: 243 --LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 178 FNLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|317129637|ref|YP_004095919.1| radical SAM protein [Bacillus cellulosilyticus DSM 2522]
gi|315474585|gb|ADU31188.1| Radical SAM domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 356
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E LS + +A + I +FTGGD
Sbjct: 11 PFIVIWEVTRACALKCLHC-RAEAQYKSDPRELSRNEGKALIDDIASMDNPL-FVFTGGD 68
Query: 154 PLILSH 159
PL+ S
Sbjct: 69 PLMRSD 74
>gi|91200261|emb|CAJ73306.1| similar to moaA/nifB/ppqE/nirJ protein family for cofactor
bionsynthesis [Candidatus Kuenenia stuttgartiensis]
Length = 333
Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-G 152
P RI L + C + C++C R+ + + A +Q + G G
Sbjct: 28 PTRICLYVTDRCTLSCKWCLRQ-STQDKFSNKRHDMSVDQARKILQHFPNAARLSLAGFG 86
Query: 153 DPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINP 194
+PL++ L K+ + V I+ + + +RI+
Sbjct: 87 EPLMVDD--LFKITAEFKKRPMRVSIITNGTLLL----ERIDD 123
>gi|290769880|gb|ADD61651.1| putative protein [uncultured organism]
Length = 502
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 42/212 (19%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIA--LTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
L + L ++ ++++ Y +TP + ND EEL
Sbjct: 34 LIDQGLTREAATAQLEQ---KYRDRADVTPA--------DIND-----CFDDIEELTAAG 77
Query: 72 E-EREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
+ D D+ + +K + L + H C + C +CF + +
Sbjct: 78 QLFAPDAYADHAFDFKNRSNVVKALC--------LHVAHTCNLNCSYCFAAQGKFHGEAG 129
Query: 125 VLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILR 179
++S + + AL ++ E S EV F GG+PL ++ + ++++ R I +H + R
Sbjct: 130 LMSFETGKRALDFLIEHSGTRRNLEVDFFGGEPL-MNFEVCKQLVAYARSIEKEHNKNFR 188
Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
F + I E+I + V +++
Sbjct: 189 F---TMTTNGIGITDEVIDWCNKECHNVVLSL 217
>gi|169832193|ref|YP_001718175.1| MiaB-like tRNA modifying protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169639037|gb|ACA60543.1| MiaB-like tRNA modifying enzyme [Candidatus Desulforudis
audaxviator MP104C]
Length = 450
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + L S+ E L + E++ TG
Sbjct: 151 RTRAFIKVQEGCRDFCTYC-----IVPYARGPLRSRPPERVLELARGLVDRGYSELVLTG 205
Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ L + L +++ L I + LR S V+P I EL++ + E
Sbjct: 206 VNLGAYGRDLGTENLPGLVRRLVRIPGLARLRLSS----VEPNEITRELVEAVAE---NP 258
Query: 208 YIAIHA 213
A H
Sbjct: 259 VCAPHF 264
>gi|154685272|ref|YP_001420433.1| YfkA [Bacillus amyloliquefaciens FZB42]
gi|154351123|gb|ABS73202.1| YfkA [Bacillus amyloliquefaciens FZB42]
Length = 373
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L + L + E + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLDEIPLLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L + + P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|284165007|ref|YP_003403286.1| radical SAM protein [Haloterrigena turkmenica DSM 5511]
gi|284014662|gb|ADB60613.1| Radical SAM domain protein [Haloterrigena turkmenica DSM 5511]
Length = 380
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 36/210 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R + ++ L + + + L E V+ +GGD
Sbjct: 12 PMVLIWELTQACGLACDHC-RADARPNRHPDELPTAEGKRLLEDAAEFGDGQLVVLSGGD 70
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG-KPVYIA 210
PL+ ++ L I H L R+ I + + I+ + +AG K + ++
Sbjct: 71 PLVRDD------VEEL--IAHGDDL--GLRMTITPSGTGSLTADRIRAMADAGLKRMAVS 120
Query: 211 IHANHP---YEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I P EF EE I A+ AG+ + + + + L +
Sbjct: 121 IDGATPESHDEFRGETGSFEETIRAVEDAKAAGLPVQVNTTVCRQ---TVGELPEIRDLL 177
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
E+ + + F + I G+
Sbjct: 178 REIGAVMWSVF----------FLVPIGRGR 197
>gi|169334037|ref|ZP_02861230.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
17244]
gi|169258754|gb|EDS72720.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
17244]
Length = 438
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 64/167 (38%), Gaps = 29/167 (17%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGI-VHR-YPDRILLKLLHVCPVYCRFCFRREM 117
+P E + + +++ +G+ VHR + + + ++ C +C +C
Sbjct: 110 SLPSLLEECDAKRKLIVEVLEDSDKLAEGLPVHRQFKHKAFVSIMKGCNNFCSYC----- 164
Query: 118 VGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG----------DPLILSHKRLQKV 165
+ S++ + L+ ++ + EV G DP + +L K+
Sbjct: 165 IVPYTRGRERSREYQNILSEVRELANDGVKEVTLLGQNVNSYGKNLDDP--VPFAKLLKM 222
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ + I+ V+ + H + ELI+ +++ K + IH
Sbjct: 223 VSEVEGIERVRFMTSHPKDLS-------DELIEVIRDNPK-ICRHIH 261
>gi|160872066|ref|ZP_02062198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
gi|159120865|gb|EDP46203.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
Length = 443
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 10/111 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
R L+ ++ C YC FC G + L D A + ++ ++ + E+ G +
Sbjct: 149 RALVSIMEGCNKYCSFCVVPYTRGEEISRPL--DDVLAEVVHLSQQ-GVREITLLGQNVN 205
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
L +++ + I + +RF + P+ R+
Sbjct: 206 DYQGPRFEGGTADLADLIRYIAAIDDILRIRFTTSHPLAFSDRLIQAYADI 256
>gi|78043321|ref|YP_359656.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus
hydrogenoformans Z-2901]
gi|123576645|sp|Q3ADX8|MOAA_CARHZ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|77995436|gb|ABB14335.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus
hydrogenoformans Z-2901]
Length = 321
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 92/239 (38%), Gaps = 33/239 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C G +L+ ++ + + +V TGG+PL+
Sbjct: 14 ISVTDKCNLNCFYCKPGNFQEFSPGDILTFEEILEVVRAFL-PLGLKKVRITGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP- 216
K L +++ + + + L + + P + LK AG V ++ + +P
Sbjct: 71 RKNLLYLIENIAALPGIDDLALTTNGILF------PRYARDLKSAGLSRVNFSLDSLNPD 124
Query: 217 --YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN-LMRTFVELR- 265
+ + AI+ + + +VLL+GIN D+ + + + R V R
Sbjct: 125 KFRSITGGGELKNVLEAINLALELDLTPVKINTVLLRGINLDEIDAFVDFIFRYPVHWRF 184
Query: 266 --IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ----PFYILDLPGGYG 318
+ P D F ++++E +I+++ + I G P ++P G
Sbjct: 185 IELMP----LNDREKWQRQF-VSVKEIVEIISAKYKLIPGKTVGGAGPARYYEVPEALG 238
>gi|29346323|ref|NP_809826.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|81445146|sp|Q8A9A2|RIMO_BACTN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|29338218|gb|AAO76020.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 436
Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + S ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ K++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|153009561|ref|YP_001370776.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
ATCC 49188]
gi|151561449|gb|ABS14947.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
ATCC 49188]
Length = 345
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 31/169 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + ++ TGG+PL+
Sbjct: 30 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 86
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
K + +++ L + + + S++ R EL +C V +
Sbjct: 87 RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 140
Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + + + I AGI + +V LK ND
Sbjct: 141 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFNDH 184
>gi|321312027|ref|YP_004204314.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
BSn5]
gi|320018301|gb|ADV93287.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
BSn5]
Length = 451
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G +L S+D E + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + K+L L ++ V+ +R S ++ +I ++I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDKVIEVLDRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVNHLHI 258
>gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
Length = 472
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 90/235 (38%), Gaps = 34/235 (14%)
Query: 57 ARQFIPQKEELNI-LPEEREDPIGDNN---HSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
Q +P + E + D + +N + + + ++L + +C + C +C
Sbjct: 36 FLQNLPGEREYQAGIQAFFSDFLASHNAPSTNDVSWPTENKIEDLVLNISQICNLACSYC 95
Query: 113 FRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+ ++ + G ++S + AL Y + + + F GG+P L+ + ++ ++
Sbjct: 96 YADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGGEP-TLAFEEIKYAVEYAE 152
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI------ 224
I + R S V + + +IN E+ Q A K Y+ + + P
Sbjct: 153 TICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVSMDGPQSIHNLLRPFTGGR 210
Query: 225 -------AAISRLANAGI-----ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
AI L + + +Q+ G++ + L+ F+E+ I+
Sbjct: 211 GSYSKALDAIVELKKKNVEVAIEAVYTQTHYKNGVS-----IRCLLDHFLEIGIR 260
>gi|288553679|ref|YP_003425614.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
gi|288544839|gb|ADC48722.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
Length = 370
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
+ C YCRFC G +G VL D E IQE + E++ GG
Sbjct: 61 TNFCDTYCRFCAFYRKPGHSEGYVL---DNERIFEKIQETIDVGGTEILMQGG---TNPD 114
Query: 160 KRLQKVLKTLRYIK 173
+L LR IK
Sbjct: 115 LKLDYYTNLLREIK 128
>gi|284923527|emb|CBG36622.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli 042]
Length = 445
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|256378891|ref|YP_003102551.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
gi|255923194|gb|ACU38705.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
Length = 460
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 48/183 (26%)
Query: 71 PEEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCF--------RREMV 118
P + P+ + + G+V R +PD L + C CRFC R +
Sbjct: 38 PRQSYRPLPPGPDADVPGLVSRSLARFPDLNLYAHVPFCRQICRFCNLYAVADAGRDDRH 97
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
VLS + AA + ++ + + GG P +L + L++++ L
Sbjct: 98 DDYVTAVLSEAERLAA---LTDRKHVTTLYLGGGTPSLLRPQLLERLVTGLLA------- 147
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA--IAAISRLANAGII 236
+ DP PE E AA+ + AGI
Sbjct: 148 -----LFATDPATPPPE-------------------TALEVDPATVDAAALRDIRAAGIN 183
Query: 237 LLS 239
++
Sbjct: 184 RIN 186
>gi|167837373|ref|ZP_02464256.1| molybdenum cofactor biosynthesis protein A [Burkholderia
thailandensis MSMB43]
Length = 370
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + G +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++ +++ L +
Sbjct: 100 PLL--RKNIEFLIERLAKM 116
>gi|22255838|gb|AAM94763.1| CalE1 [Micromonospora echinospora]
Length = 441
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 29/163 (17%)
Query: 98 LLKLLHVCPVYCRFC---FRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152
L + C + C FC R Q L + E + + F GG
Sbjct: 49 LYVHVPFCEMRCGFCNLFTRANAPAEQVTGYLRQLRRQAEQVADALGADAGYARAAFGGG 108
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGK- 205
P L+ L ++ + +R+P V P P+ + L G
Sbjct: 109 TPTYLTADELAELFD-------IATTTTGARLPGVPLSVETSPATATPDRLAVLAAHGTT 161
Query: 206 PVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
V I + A P + E AA+ + +A I +L+
Sbjct: 162 RVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDARIPVLN 203
>gi|84496509|ref|ZP_00995363.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
HTCC2649]
gi|84383277|gb|EAP99158.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
HTCC2649]
Length = 336
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C E + K +L+ + ++ I + +V TGG+PL+
Sbjct: 23 VSVTDRCNLRCRYCMPAEGLPWLAKPEMLTDDELIRLVS-IFVALGVEQVRLTGGEPLL- 80
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
+ L ++ + + + + L L AG V I++ P
Sbjct: 81 -RRSLTDLVGRIAALTPRPRIAMTTNGIG------LDRLAGPLAAAGLDRVNISLDTVDP 133
Query: 217 YEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD--PEILANLMRTFVELR 265
EF++ A + AG + + +V ++GIND ++LA + ELR
Sbjct: 134 KEFADLTRRDRLKDVEAGLEAAREAGLVPVKVNAVAMRGINDHSVADLLAWCLERGYELR 193
>gi|310658531|ref|YP_003936252.1| isopentenyl-adenosine a37 tRNA methylthiolase [Clostridium
sticklandii DSM 519]
gi|308825309|emb|CBH21347.1| isopentenyl-adenosine A37 tRNA methylthiolase [Clostridium
sticklandii]
Length = 477
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ D + + ++G+ RY + + +++ C +C +C + S++ E +
Sbjct: 166 VWDIDGNVIEGLPSARRYDLKAFVNIMYGCNNFCTYC-----IVPYTRGRERSRNPEDVI 220
Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVD 188
++ ++ + E+ G + + K+L L I+ ++ +RF +
Sbjct: 221 NEVKDLARNGVKEITLLGQNVNSYGNDFDNKVSFAKLLTMLNDIQGIERIRFMTSH---- 276
Query: 189 PQRINPELIQCLKEAGK 205
P+ I+ ELI + K
Sbjct: 277 PKDISEELIDAVANLDK 293
>gi|193213382|ref|YP_001999335.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
gi|193086859|gb|ACF12135.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
Length = 456
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 21/126 (16%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C C +C R TV+ A Y E++
Sbjct: 154 RTRAFLKIQDGCSFGCAYCAIPLARGRSRSVPLATVMERAAAIAEAGY-------REIVL 206
Query: 150 TGGDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TG + + +L+ L + V +R S ++PQ ++ ELI+ + + K
Sbjct: 207 TGINIADYHDGQHGFTDLLRHLEELD-VSRIRISS----IEPQFLDDELIELVAGSTK-- 259
Query: 208 YIAIHA 213
I H
Sbjct: 260 -IMPHF 264
>gi|197117199|ref|YP_002137626.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197086559|gb|ACH37830.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
Length = 507
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 16/108 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C + + T+L +K + + + I +V +GGDPL
Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLPAKRWKEIIGE-AKSLGIEQVTLSGGDPLYRK 201
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG 204
+ L I + + P + I E+ + L E G
Sbjct: 202 --------EALALIGEL----IAKDMLFQLPTKCCITEEIAERLVEVG 237
>gi|300940154|ref|ZP_07154761.1| radical SAM domain protein [Escherichia coli MS 21-1]
gi|300455015|gb|EFK18508.1| radical SAM domain protein [Escherichia coli MS 21-1]
Length = 445
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|291548154|emb|CBL21262.1| RNA modification enzyme, MiaB family [Ruminococcus sp. SR1/5]
Length = 375
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 27/130 (20%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
R +K+ C +C +C + + S++ E+ L ++ ++ EV+ TG
Sbjct: 79 RAYIKVQDGCNQFCTYC-----IIPYARGRVRSRNIESVLKEVRALAEKGYKEVVLTGI- 132
Query: 154 PLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LS + L +++ + I+ ++ +R S ++P + E + +
Sbjct: 133 --HLSSYGVDFPEEKKETLLSLIRAVHEIEGIRRIRLGS----LEPGIVTREFAEGIAAL 186
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 187 PK---VCPHF 193
>gi|197303019|ref|ZP_03168067.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
29176]
gi|197297874|gb|EDY32426.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
29176]
Length = 440
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 16/146 (10%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEA 133
P+ + G Y LK+ C +C +C ++ G+ + + + E
Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCIIPKVRGNYRSVPMERLVNEAREL 185
Query: 134 ALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
A ++E + E G D + K L K++K L I ++ +R P+ I
Sbjct: 186 AEQGVKELILVAQETTLYGKD--LYGEKSLHKLVKELCNISGIRWIRI----LYCYPEEI 239
Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217
ELIQ +KE K Y+ + H
Sbjct: 240 TDELIQVMKEEPKVCHYLDLPIQHAN 265
>gi|52425076|ref|YP_088213.1| molybdenum cofactor biosynthesis protein A [Mannheimia
succiniciproducens MBEL55E]
gi|81609553|sp|Q65TT2|MOAA_MANSM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|52307128|gb|AAU37628.1| MoaA protein [Mannheimia succiniciproducens MBEL55E]
Length = 337
Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 18/161 (11%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + VC C +C QK + LS + + +V TGG+P L
Sbjct: 27 LSVTDVCNFKCTYCLPSGYQPPVQKESFLSLDEIRRIVGAFAAMGT-EKVRLTGGEP-TL 84
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
L +++T+ ++ ++ + + R+ ++ + K + +++ + P
Sbjct: 85 RKDFLA-IVETISALEGIKKV-----ALTTNGYRMEKDVERWKKAGVSSINVSVDSLDPR 138
Query: 218 E---FSEE-----AIAAISRLANAGII-LLSQSVLLKGIND 249
+ + E + I R G + SVL+K +ND
Sbjct: 139 QFYSITGENKFHQVMKGIERAFEIGYEKIKVNSVLMKNLND 179
>gi|91201046|emb|CAJ74104.1| similar to moaA/nirJ/ppqE family of cofactor synthesis proteins
[Candidatus Kuenenia stuttgartiensis]
Length = 350
Score = 41.2 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 44/222 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L+ C + C +C+ G LS ++ ++ + + ++ GG+PL+
Sbjct: 32 LEFTKKCNLRCLYCYSSA--GFAAENELSLEEMKSVVDQAKGLGAKKIILLGGGEPLLY- 88
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+ + ++K + I +Q + F + + I+ E+ Q L V + I N
Sbjct: 89 -EGVVDIIKYINSIG-LQQILF-TNGVL-----IDKEIAQTL--YRNKVSVVIKYN---S 135
Query: 219 FSEEAIAAISR--------------LANAGII-----LLSQSVLLK-GINDDPEILANLM 258
F+ E ++ L +G L QSV+ K IN+ PE+ +
Sbjct: 136 FNPEVQDMLANAKGTYKQITRGLKILMESGYPREDLGLGIQSVICKQNINEIPEMW--MW 193
Query: 259 RTFVELRIKPY---YLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ I PY + A + E ++I L
Sbjct: 194 AR--KRNIIPYFEILTYQGR-ARENKDLIVPTLEIKEIFKRL 232
>gi|332827121|gb|EGJ99906.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
gadei ATCC BAA-286]
Length = 431
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 53/229 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C M G + + ++ E + ++ ++ +
Sbjct: 138 AYLKISEGCNRACSYCSIPIMTGKHQSRQI--EEVEEEVRHLVASGVKEFQVIAQDLSYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELI------- 197
G D +L +++ + I+ V+ +R H P P R N +
Sbjct: 196 GLD--NYKQAKLPELIDRIAKIEGVEWIRLHYAYPANFPYDLLPVMRNNENVCKYLDIAL 253
Query: 198 -----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
LK+ + + N EE GI + + L+ G P
Sbjct: 254 QHISDNMLKKMRRNITKEQTYNLIKRIREEV---------PGIHIR--TTLMVG---HPG 299
Query: 253 ILANLMRTFV---------ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+ + PY H D +H+R I + K
Sbjct: 300 ESHKDFEELLQFVKDVRFDRMGAFPY--SHEDGTYAYAHYRDEISDAVK 346
>gi|291550943|emb|CBL27205.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
torques L2-14]
Length = 440
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 16/146 (10%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+ + G Y LK+ C +C +C + +V + + A
Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCII-PKIRGNFRSVPMERLLKEAQD 184
Query: 137 YIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
+ E+ ++ L K L K+L+ L I ++ +R P+ I
Sbjct: 185 -LAEQGVKELILVAQETTLYGKDLYGEKSLPKLLRELCKISGIRWIRI----LYCYPEEI 239
Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217
ELIQ +KE K Y+ + H
Sbjct: 240 TDELIQVMKEESKICHYLDLPIQHAN 265
>gi|253577928|ref|ZP_04855200.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850246|gb|EES78204.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 485
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ + ++G+ +Y + + ++ C +C +C + S++ EA +
Sbjct: 175 VWKESDEIVEGMPSDRKYSFKTGVNIMFGCNNFCSYC-----IVPYVRGREKSREPEAII 229
Query: 136 AYIQE--KSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIV 187
I+ + EV+ G + + K L+ +LK + I+ ++ +RF +
Sbjct: 230 EEIKGLVADGVTEVMLLGQN-VNSYGKTLEHPVTFAQLLKQVEAIEGLKRIRFMTSH--- 285
Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212
P+ ++ ELI+ + E+ K V +H
Sbjct: 286 -PKDLSDELIRTMAES-KKVCHHLH 308
>gi|171185411|ref|YP_001794330.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170934623|gb|ACB39884.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 216
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L CP+ CR+C + G L D E + + V+ TGG+PLI
Sbjct: 23 AVFIRLAGCPIRCRYCDTKYSWDPLGGEEL---DAEEVVRRAAAHGPLGHVVITGGEPLI 79
Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
+ L ++ LR + V++
Sbjct: 80 --WRNLHELACPLRRLGTVEV 98
>gi|158422523|ref|YP_001523815.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
caulinodans ORS 571]
gi|158329412|dbj|BAF86897.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
caulinodans ORS 571]
Length = 399
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 41/172 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 84 VSVTDRCDFRCVYCMSEHMTFLPKPDLLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 142
Query: 159 H-KRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L + L H++ R S++ R +L C + V I
Sbjct: 143 DVMTLFRSLSR-----HLETGRLEELTLTTNGSQL-----ARFAGDLAACGVK-RINVSI 191
Query: 210 AIHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGIN 248
+ AI+R AGI + +V LK +N
Sbjct: 192 DT-------LDPDKFRAITRWGDLAKVLEGVKAAQRAGIHVKLNAVALKDVN 236
>gi|116748163|ref|YP_844850.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697227|gb|ABK16415.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 292
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQ-IWEVIF 149
D +LL++ C C FC G+ KG KD +A + Y + V
Sbjct: 18 DSVLLQVTVGCSHNKCTFC------GTYKGERFRIKDDATIDADIRYAAGNLSFLHRVFL 71
Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD LI+ RL ++++ +R + ++ + + + R PE + L+E G +
Sbjct: 72 VDGDALIIPQDRLVRIMRRIREEMPWIRRVGLYGNAKSIL--RKTPEQLAELRELGLGIV 129
>gi|300691998|ref|YP_003752993.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
gi|299079058|emb|CBJ51720.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
Length = 387
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E E + ++ TGG+
Sbjct: 62 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERIARLFIEH-GVEKIRLTGGE 120
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
PL+ ++++++ L R H+R
Sbjct: 121 PLLRKD--IERLVEMLA--------RLHTR 140
>gi|224538617|ref|ZP_03679156.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519751|gb|EEF88856.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
DSM 14838]
Length = 498
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156
L L + C +CR+C + V + T L I+E ++ + ++ GG+ +
Sbjct: 146 LMLTNRCMAHCRYC-----YADTRTQVQNWLPTSRILELIREAAELPVQQINLIGGEIFL 200
Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+L L ++H ++ +++P E ++ LK+ I + +
Sbjct: 201 HKD--WDIILAEL--VRHGIEPEFISTKIP------FTEECLRKLKQTHYKNLIQVSLDA 250
Query: 216 ------PYEFSEEAIAAISRLANAGIILLSQ--------SVLLKGINDDPEILANLMR-- 259
S ++ A + G+ +L Q SVL N DP L +L R
Sbjct: 251 IDTTVLVQSLSVDSSYASEMMR--GLRMLDQSGLPYQVSSVLTTY-NCDPRTLTDLFRFL 307
Query: 260 ----TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
+ R+ P G + + + ++ I L+E +
Sbjct: 308 STLKNLHDWRLTPVSNSTTTKYPGFADLKPSHQKISDIFRFLQEAV 353
>gi|239627763|ref|ZP_04670794.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517909|gb|EEQ57775.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 460
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 29/167 (17%)
Query: 64 KEELNILPEEREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
++E D G + + P + I R +K+ C +C +C G
Sbjct: 119 EDEGPKSGIHVLDIGGTDEYEPLHVDNIED--HTRAFIKVQDGCNQFCSYCIIPYARGRV 176
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTG------------GDPLILSH---KRLQKVL 166
+ +D EA + + + EV+ TG G P+ + L ++
Sbjct: 177 RSR--KPEDVEAEVEGLVAR-GYKEVVLTGIHLSSYGMEHREGGPVQGGNWDHGPLLDLI 233
Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ I ++ +R S ++P+ I E + L K H
Sbjct: 234 GRIHRIPGLERIRLGS----LEPRIITEEFAEALAGLAK---FCPHF 273
>gi|170754856|ref|YP_001781949.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
gi|238065365|sp|B1II37|RIMO_CLOBK RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|169120068|gb|ACA43904.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
Okra]
Length = 445
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + ++ V+ +R P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITKELIEEIKNNDK 254
>gi|168180715|ref|ZP_02615379.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
gi|226949759|ref|YP_002804850.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
gi|182668451|gb|EDT80430.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
2916]
gi|226843731|gb|ACO86397.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
Kyoto]
Length = 445
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + ++ V+ +R P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITKELIEEIKNNDK 254
>gi|167764860|ref|ZP_02436981.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
43183]
gi|167697529|gb|EDS14108.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYP-------DRILLKLLHVCPVYCRFCFRREMVG 119
L L + R+ G+ + S LK I P R LK+ C YC +C
Sbjct: 114 LQYLGDLRKHESGEAHTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFAR 172
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQ 176
+ + E A E++ TG GD + + ++K L ++ ++
Sbjct: 173 GRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDDVECIE 230
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
R S ++P + E+I+ + + + H + P S+E + + R
Sbjct: 231 RYRISS----IEPNLLTDEIIEFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|153940621|ref|YP_001391704.1| RNA modification protein [Clostridium botulinum F str. Langeland]
gi|238065366|sp|A7GFZ4|RIMO_CLOBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|152936517|gb|ABS42015.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
Langeland]
gi|295319732|gb|ADG00110.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
230613]
Length = 445
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + ++ V+ +R P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITKELIEEIKNNDK 254
>gi|148380361|ref|YP_001254902.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 3502]
gi|153932059|ref|YP_001384581.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
gi|153935820|ref|YP_001388097.1| RNA modification protein [Clostridium botulinum A str. Hall]
gi|238065360|sp|A7FVY1|RIMO_CLOB1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|238065364|sp|A5I4I1|RIMO_CLOBH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|148289845|emb|CAL83953.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
3502]
gi|152928103|gb|ABS33603.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
ATCC 19397]
gi|152931734|gb|ABS37233.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
Hall]
Length = 445
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)
Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
H+Y D RIL + C +C +C + G + ++ +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184
Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ ++ + E+I D + K L ++L+ + ++ V+ +R P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239
Query: 191 RINPELIQCLKEAGK 205
I ELI+ +K K
Sbjct: 240 EITKELIEEIKNNDK 254
>gi|117924796|ref|YP_865413.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1]
gi|167011814|sp|A0L7R4|MOAA_MAGSM RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|117608552|gb|ABK44007.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1]
Length = 326
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 59/168 (35%), Gaps = 30/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C E + LS + LA + I TGG+PL+
Sbjct: 16 VSVSEQCNMRCNYCRVPEQESQLREQWLSFAELSRLLARFAQ-LGIGRFRLTGGEPLVRK 74
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
L +++ L + V+ + + + P + LKEAG V I++
Sbjct: 75 D--LAQLVAGLHQLAGVEEISLSTNGL------LLPRFAKALKEAGIARVNISL-----D 121
Query: 218 EFSE--------------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E A I AG+ + V++ G+ND
Sbjct: 122 SLDPSGFQKICGDVGSPDEVKAGILAALEAGLTPVKVNMVVMGGVNDH 169
>gi|291519768|emb|CBK74989.1| Organic radical activating enzymes [Butyrivibrio fibrisolvens 16/4]
Length = 222
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 97 ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L C + C +C R ++ + L Y++ + V TGG+PL
Sbjct: 24 AVFIRLRGCNLACSYCDTRWACSYEAPAEQMTEVEI---LDYVKST-GVNRVTLTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
+ ++ +L+ ++++
Sbjct: 80 --KARDIKDLLRAFAAEPNIKV 99
>gi|291459240|ref|ZP_06598630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418494|gb|EFE92213.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 479
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ + R + + + C +C +C V ++ + S + +++ + E++
Sbjct: 185 LRKTDFRASVNISYGCNNFCTYCI-VPYVRGREKSRSSEEILRECRDLVRD--GVKEIML 241
Query: 150 TGGDP--LILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G + L + L+ ++L+ + I ++ +RF + P +P+ + ELI + E +
Sbjct: 242 LGQNVNSYGLDREELRFPELLRRVSEIPGLRRIRFMT--P--NPKDFSEELIDLIGE-RE 296
Query: 206 PVYIAIH 212
+ IH
Sbjct: 297 NICRHIH 303
>gi|167754725|ref|ZP_02426852.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402]
gi|167705557|gb|EDS20136.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402]
Length = 382
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 9/134 (6%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + C + C C G+ ++ D + L+ ++ V GG
Sbjct: 49 YPKTLQFPITNKCNLDCIMCNIH---GNDIKNEMNIDDIKRVLSN-SIFCKVESVGINGG 104
Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+P IL ++ +L TL ++++ I+ + +P P +I E+ K+ ++
Sbjct: 105 EPFILKDITSIIETILDTLPALRNLYIISNGT-IPN-CPDKI-KEIYNLCKKHNVKFTLS 161
Query: 211 IHANHPYEFSEEAI 224
+ E E
Sbjct: 162 FSIDGFDEMHNEMR 175
>gi|113968874|ref|YP_732667.1| radical SAM domain-containing protein [Shewanella sp. MR-4]
gi|114048989|ref|YP_739539.1| radical SAM domain-containing protein [Shewanella sp. MR-7]
gi|113883558|gb|ABI37610.1| Radical SAM domain protein [Shewanella sp. MR-4]
gi|113890431|gb|ABI44482.1| Radical SAM domain protein [Shewanella sp. MR-7]
Length = 295
Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 31/165 (18%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKS-QIWEVIFTGG 152
++L++ + C C FC +M + + K E + I + + V G
Sbjct: 19 LILQVTNGCSWNQCSFC---DMYTQPQKAFRAQKLDKIEQDILAIAKTGMPVSRVFLADG 75
Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPV 207
D + L RL+ + + + R++ V +R+ P+ + PE + L+E G +
Sbjct: 76 DAMSLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSL 129
Query: 208 YIAIHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
+ E E ++AA+ ++ AG +++L+
Sbjct: 130 LYVGCESGDDEVLAKIKKGETFESSLAALQKIRAAGMKSSVMILN 174
>gi|302389477|ref|YP_003825298.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
DSM 16646]
gi|302200105|gb|ADL07675.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
DSM 16646]
Length = 441
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E ED + N + HR R LK+ C ++C +C + G + L +
Sbjct: 128 EVEDIMQTRNFEEIAFRGHRQRTRAFLKIQEGCNMFCSYCIIPYVRGPVRSRTL--ESII 185
Query: 133 AALAYIQEKSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHS 182
+ E++ TG L + L V++ L I+ ++ +R S
Sbjct: 186 REAENLAGD-GFKEIVLTGIHLGLYGADFKGGPTLYDVIERLSRIEGIKRIRLSS 239
>gi|238893550|ref|YP_002918284.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae
NTUH-K2044]
gi|238545866|dbj|BAH62217.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 395
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
P+ SP+ + P + C + CR+C+ + + E +
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63
Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179
Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|257068045|ref|YP_003154300.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
gi|256558863|gb|ACU84710.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
Length = 366
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 51/235 (21%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREM 117
+P + E D + +P + R+ L L C + C +C
Sbjct: 10 MPTPRRTDETATELPDTS-ERPDTPA--LADRFGREATDLRLSLTDFCNLRCTYCM---- 62
Query: 118 VGSQKGTVLSSKDT---EAALAYIQ---EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ T L K + + ++ E+ I +V FTGG+PL L++++ +
Sbjct: 63 -PASGLTFLGKKQLLSVDEVVRLVRIGVERLGIEQVRFTGGEPLTRPD--LEEIIAGVAS 119
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
+ + + L+ AG RL+
Sbjct: 120 LDPRPDISLTTNAIG------LDHRAARLRAAGLDRINV-------SLDSVVSETFERLS 166
Query: 232 N--------AGI---------ILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267
AGI + +VLL G+ND P++L + ++LR+
Sbjct: 167 RRPLLHRVLAGIDGARAAGLDPIKVNAVLLPGVNDQELPDLLDWCLERELQLRVI 221
>gi|83310894|ref|YP_421158.1| arylsulfatase regulator [Magnetospirillum magneticum AMB-1]
gi|82945735|dbj|BAE50599.1| Arylsulfatase regulator [Magnetospirillum magneticum AMB-1]
Length = 459
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 27/140 (19%)
Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEE----------REDPIGDNNHSPLKGIVHR 92
LI+ N + R K+E+ + + RED + + H
Sbjct: 26 YTALIDADNAFWALVR-----KDEMERVLDNGALERDWRAKREDFAREMDMLRF----HL 76
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEK-SQIWE- 146
P + C + C +C+ + G +S A+ Y + +
Sbjct: 77 KPSAVYFNPTERCNLDCSYCYI-PQTMRRSGEHMSRDRLMEAMARLDEYFSRTMPEGRKP 135
Query: 147 -VIFTGGDPLILSHKRLQKV 165
+IF G +PL+ + +
Sbjct: 136 QIIFHGAEPLLNRDAMFEAI 155
>gi|150019250|ref|YP_001311504.1| thiamine biosynthesis protein ThiH [Clostridium beijerinckii NCIMB
8052]
gi|149905715|gb|ABR36548.1| biotin and thiamin synthesis associated [Clostridium beijerinckii
NCIMB 8052]
Length = 472
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 32/210 (15%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI+ L L + C C +C L+ ++ + + +Q+
Sbjct: 77 QRFYGNRIVMFAPLYLSNYCVNGCTYCPYHHKNKHITRKKLTQEEIKNEVIALQDMGHKR 136
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201
+ TG DP+ + + + ++T+ IKH ++ + V+ E + LK
Sbjct: 137 LALETGEDPVNNPLEYVLESIETIYSIKHKNGAIRRV-------NVNIAATTVENYRKLK 189
Query: 202 EAGKPVYIAI----HANHPYEFSEEA--------IAAISRLANAGIILLSQSVLLKGIN- 248
+AG YI H E A+ R AGI + V L G+N
Sbjct: 190 DAGIGTYILFQETYHKKTYEELHPTGPKHDYAYHTEAMDRAMEAGIDDVGLGV-LYGLNM 248
Query: 249 ---DDPEILANLMRTFVELRIKPYYLHHPD 275
D +L + + + P+ + P
Sbjct: 249 YRYDFVGLLMHAEHLEAAMGVGPHTISVPR 278
>gi|257094383|ref|YP_003168024.1| molybdenum cofactor biosynthesis protein A [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046907|gb|ACV36095.1| molybdenum cofactor biosynthesis protein A [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 359
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 37/191 (19%)
Query: 85 PLKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
P+ + R+P L L + C C +C EM + VL+ ++
Sbjct: 21 PISPVTSRHPKGALVDKFGRHVTYIRLSITDRCDFRCSYCMAEEMTFLPRAQVLTLEECL 80
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP 189
+ +V TGG+PL+ + +L+ + + ++ L S++
Sbjct: 81 RIAGTF-VDLGVTKVRVTGGEPLVRHNAI--WLLERIAGLSGLKELVITTNGSQL----- 132
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHP---YEFS-----EEAIAAISRLANAGI-ILLS 239
L+ AG + + +++ E + + + + AG L
Sbjct: 133 ----DRFAAALRAAGVRRINVSLDTLRSQRFREITRVGDLAKVLRGLDAAQAAGFERLKL 188
Query: 240 QSVLLKGINDD 250
+V+++G+NDD
Sbjct: 189 NTVMMRGVNDD 199
>gi|220933522|ref|YP_002512421.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
gi|219994832|gb|ACL71434.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
Length = 327
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 35/176 (19%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + L + C + C +C + ++ LS + + + + V T
Sbjct: 10 RHIEYVRLSVTDQCDLRCFYCMPKGFKDFEEPEHWLSFDEIARVMGAFGQ-LGVQRVRIT 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+PL+ + ++ L + + + +R+ + Q LK+AG
Sbjct: 69 GGEPLVRKD--IPDLVSRLAALPGINDISLSTNATRM---------AKHAQALKDAG--- 114
Query: 208 YIAIHAN-HPYEFSEEAIAA------------ISRLANAGI-ILLSQSVLLKGIND 249
N E + AG + V +KG+ND
Sbjct: 115 --VARINVSLDSLKPEVFKQVTGGKLEKVLDGLMAAKAAGFSPIKINMVAMKGVND 168
>gi|293412933|ref|ZP_06655601.1| conserved hypothetical protein [Escherichia coli B354]
gi|291468580|gb|EFF11073.1| conserved hypothetical protein [Escherichia coli B354]
Length = 445
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIINTLREKLPLTPDCEITIEGRVLNFDAERIDA 164
>gi|289578370|ref|YP_003476997.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
Ab9]
gi|297544647|ref|YP_003676949.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528083|gb|ADD02435.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
Ab9]
gi|296842422|gb|ADH60938.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 436
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 18/140 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C C FC + G + + +D + +K ++
Sbjct: 146 AYLKIAEGCSNVCSFCAIPRIRGRYRSRKM--EDILKEAEELVKKGAKELILIAQDTTKY 203
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D I L ++LK L I +++ +R P + ELI+ +K K V YI
Sbjct: 204 GID--IYKKFMLPQLLKELSLIPNLKWIRL----LYAYPDSVTDELIEEIKANKKVVKYI 257
Query: 210 AIHANHPYEFSEEAIAAISR 229
I H +E + + R
Sbjct: 258 DIPLQHSN---DEVLKRMKR 274
>gi|228949292|ref|ZP_04111556.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228810418|gb|EEM56775.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 462
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG
Sbjct: 122 YPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSIDQIKSLLDDL-NHIGVKLIELTGG 178
Query: 153 DPLILSHKRLQKVL 166
D + + L+++L
Sbjct: 179 DITVHPN--LKEIL 190
>gi|170756363|ref|YP_001782065.1| hypothetical protein CLD_2115 [Clostridium botulinum B1 str. Okra]
gi|169121575|gb|ACA45411.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
Length = 444
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + RLA GI + Q VL G+N + E L + L
Sbjct: 163 -NRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209
>gi|121594117|ref|YP_986013.1| molybdenum cofactor biosynthesis protein A [Acidovorax sp. JS42]
gi|120606197|gb|ABM41937.1| GTP cyclohydrolase subunit MoaA [Acidovorax sp. JS42]
Length = 378
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F + +LS ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176
PL+ L+ ++ L ++ ++
Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123
>gi|331270008|ref|YP_004396500.1| MiaB-like tRNA modifying protein [Clostridium botulinum BKT015925]
gi|329126558|gb|AEB76503.1| MiaB-like tRNA modifying enzyme [Clostridium botulinum BKT015925]
Length = 433
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R LK+ C +C +C + SK+ E + +++ S+ EVI +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKNPETIIDEVKKLSEHGFKEVILSG 195
Query: 152 GDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D L + L+ VLK + I+ + +R S + P+ + ++I+ + K
Sbjct: 196 IDISSYGVDLEGNWNLLK-VLKAIDEIEGINRVRIGS----IGPEFFDEDIIKEIGSLKK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---LCPHF 255
>gi|260072600|gb|ACX30499.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
cluster bacterium]
gi|269467972|gb|EEZ79700.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
cluster bacterium]
Length = 331
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C C +C R ++ +LS +D + + E I +V TGG+PL+
Sbjct: 17 ISITEHCNYRCFYC-RDDEHTPNCKREDILSYEDIQRIVRLFAE-LGISKVRLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA-- 213
+ + K+ + + I ++ + P+ + + L E G V I+I +
Sbjct: 75 --RRGIVKIARLISSIDGIKDV------PLSTNAHLLEKFAPKLHENGINRVNISIDSLM 126
Query: 214 -NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
N E + E I I +G+ + V+++G ND+
Sbjct: 127 PNRFKEITRGGDVNEVIKGIDAAIASGMHPIKINMVVMRGNNDN 170
>gi|157373260|ref|YP_001471860.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
gi|157315634|gb|ABV34732.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
Length = 328
Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIWE 146
R + + L + C C +C S+ L+ + LA++ + + + +
Sbjct: 10 RKVEYLRLSVTDRCDFRCVYCM------SEDPCFLNREQVLSLEELAWVGQAFTELGVRK 63
Query: 147 VIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ TGG+PL+ + +L K+L L + + + SR+ + + ++ +G
Sbjct: 64 IRLTGGEPLVRTDCDQLVKLLGDLPGLSELSMTTNGSRL---------TKFAEKMRGSGL 114
Query: 206 -PVYIAIHANHPY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
+ I++ P E + E I I AG + +V+L+G NDD
Sbjct: 115 GRLNISLDTLKPELFTELTRNGKLERVIEGIDAAKAAGFTRIKINAVILRGQNDD 169
>gi|163814151|ref|ZP_02205543.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
gi|158450600|gb|EDP27595.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
Length = 437
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFT 150
K+ C C +C + G + + A+ + ++ E
Sbjct: 142 AYFKIAEGCNKLCTYCIIPHIRGRYR--SIPMDRLLASAEKLAADGIKELVLVAQETTLY 199
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + K+L ++L L I+ ++ +R P+ I ELI + E K
Sbjct: 200 GVD--LYGGKKLPELLTKLSDIEGIEWIRL----LYCYPEEITDELISVMAENPK 248
>gi|237737359|ref|ZP_04567840.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
gi|229421221|gb|EEO36268.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
Length = 222
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C + C +C R G L S+D I + S I + TGG+PL+
Sbjct: 24 AIFIRLQKCNLNCSYCDTRWANGDDAPYTLMSED--KIYDRILK-SGIKNITLTGGEPLL 80
Query: 157 LSHKRLQKVLKTLRYIKHV 175
+ +L+ + ++
Sbjct: 81 HKDVEI--LLEKIGENPNL 97
>gi|229106153|ref|ZP_04236707.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
gi|228677271|gb|EEL31594.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
Length = 373
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + L+ ++ + + I E + ++FTGGD
Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + + IK + +R S P P + E IQ KE G +
Sbjct: 68 PLMRPD--IYDIAD--YAIK--KGVRL-SMTPSATPN-VTKETIQKAKEVGIARWAFSLD 119
Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H +E + I AI L I + +V+ + E +A L+
Sbjct: 120 GPTAEIHDHFRGVEGSFELT---INAIRYLHELEIPVQINTVISNYNVNVLEDMAKLVEE 176
Query: 261 F 261
Sbjct: 177 L 177
>gi|288572914|ref|ZP_06391271.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568655|gb|EFC90212.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 432
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R LK+ C +C +C + G L D E + + E S E++ TG
Sbjct: 144 TRAFLKVQDGCDHFCSYCIIPFLRGKPVSRPL--DDLEREVRSVVE-SGCPEIVLTGVHL 200
Query: 155 LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ + L +L+ + I V+ +RF S ++P + +L+ + E
Sbjct: 201 GLYGREGGPGLADLLRAVGAIDGVKRIRFGS----LEPFSVGDDLLDAMAE 247
>gi|218707132|ref|YP_002414651.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
gi|293407121|ref|ZP_06651045.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
gi|298382869|ref|ZP_06992464.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
FVEC1302]
gi|300898197|ref|ZP_07116554.1| radical SAM domain protein [Escherichia coli MS 198-1]
gi|331665122|ref|ZP_08366023.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA143]
gi|218434229|emb|CAR15147.1| putative oxygen independent coproporphyrinogen III oxidase
(chuW-like) [Escherichia coli UMN026]
gi|291425932|gb|EFE98966.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
gi|298276705|gb|EFI18223.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
FVEC1302]
gi|300358113|gb|EFJ73983.1| radical SAM domain protein [Escherichia coli MS 198-1]
gi|331057632|gb|EGI29618.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli TA143]
Length = 445
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
LTP A ++ P D R +P + + + E+ + SP
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56
Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
R++ + C +C FC F + + ++ E A + + + + I V F
Sbjct: 57 KRLIYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116
Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193
GG P LS L +++ TLR + + RV D +RI+
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163
>gi|291522480|emb|CBK80773.1| Radical SAM superfamily [Coprococcus catus GD/7]
Length = 278
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
++ +Y ++ L +L C C CF R GS K ++ KD + + E + E
Sbjct: 1 MLKKY--KVNLHVLEACNFRCFHCFSR--FGSNK--IMGLKDWKQIVDNCMESQVVSEFN 54
Query: 149 FTGGDPLILSHKR-LQKVLKT 168
GG+PL+ L K ++
Sbjct: 55 IAGGEPLLYKDLIGLTKYIRE 75
>gi|323526884|ref|YP_004229037.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1001]
gi|323383886|gb|ADX55977.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
CCGE1001]
Length = 369
Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLSQL 116
>gi|320104529|ref|YP_004180120.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
gi|319751811|gb|ADV63571.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
Length = 341
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C + + +LS ++ E + + I ++ TGG+PL+
Sbjct: 29 ISVTDRCNIRCVYCMPETVQFLPRAEILSFEEIERVVR-VAVGLGINKLRLTGGEPLVRR 87
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP- 216
L K++ L I +Q + + ++ P L Q L +AG + + +++ P
Sbjct: 88 D--LTKLVARLTAIPGIQDVGLTTNGLLLGP------LAQPLWDAGLRRINVSLDTLDPV 139
Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGI 247
E + E+ I I AG + +V +KG+
Sbjct: 140 SFRELTRRDGLEQVIEGILAAKRAGFDPVKINAVAIKGV 178
>gi|297171740|gb|ADI22732.1| 2-methylthioadenine synthetase [uncultured verrucomicrobium
HF0500_27H16]
Length = 439
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 16/140 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
R LK+ C C FC + S+D + L Q + E+I TG
Sbjct: 148 QRANLKIQDGCDFMCTFC-----IIPFARGRARSRDFQNLLEEAQNLVARGVRELIITGV 202
Query: 153 DPLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ S + + ++ L + + +R S P P+ L + +++ +
Sbjct: 203 NIGTYKHSGEGIVDIVDALDDLDGLTRIRISSIEPTTIPEI----LFERMRDPSHALLPY 258
Query: 211 IHANHPYEF-SEEAIAAISR 229
+H P + S+E + A+ R
Sbjct: 259 LHI--PLQAGSDEILEAMRR 276
>gi|317488728|ref|ZP_07947264.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|316912159|gb|EFV33732.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
Length = 435
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 22/177 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156
L C C FCF + + + + ++ V TGG+PL+
Sbjct: 89 FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147
Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209
+ + + ++ H+++ ++ L+ L++AG + I
Sbjct: 148 HADESVAFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199
Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ + E ++A+ ++R ++ + ++ G E + L+ ++
Sbjct: 200 DVLDVDRADEIIDDAVDVLARAKRFIPQVMVEMPVMPG---TGEAMRRLLDRLDQVG 253
>gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum
ferrodiazotrophum]
Length = 464
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 195 ELIQCLKEAGKPVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSVLLKG 246
+ ++ L++ P+YI++HA P + +++ + + RL N GI L +Q VL+ G
Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207
Query: 247 INDDPEILANLMRTFVEL 264
IND E L + L
Sbjct: 208 IND-GEALLRTWKDLSAL 224
>gi|319899903|ref|YP_004159631.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
gi|319414934|gb|ADV42045.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
Length = 439
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 14/151 (9%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS R LK+ C YC +C + + E A + +
Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQAVADGG 195
Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E++ TG GD + + ++K L ++ ++ R S ++P + E+I+
Sbjct: 196 --KEIVLTGVNIGDFGKSTGETFFDLVKALDGVEGIERYRISS----IEPNLLTDEIIEY 249
Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ + + H + P S+E + + R
Sbjct: 250 VAGSRR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|312897518|ref|ZP_07756938.1| radical SAM protein family [Megasphaera micronuciformis F0359]
gi|310621370|gb|EFQ04910.1| radical SAM protein family [Megasphaera micronuciformis F0359]
Length = 349
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 26/159 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ CP C FC + V Q + + Y ++K +EV F GG
Sbjct: 8 VFIPHLGCPHRCVFCDQ-HTVTGQAEVPTGADTAQKIATYTRKKGAAYEVAFYGG-SFTA 65
Query: 158 SHKRL-QKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
L +++L+ V +R +R P I+ E++ LK G + V + +
Sbjct: 66 VSATLQEELLQPAYEALQNGLVSAIRCSTR-----PDCIDDEVLNRLKRYGVRTVELGVQ 120
Query: 213 AN-----------HPYEFSEEAIAAISRLANAGIILLSQ 240
+ H E + A+S L +G + Q
Sbjct: 121 SMDDRVLQAAKRGHTSE---DVYRAVSLLKKSGFTIGLQ 156
>gi|284518792|gb|ADB92509.1| radical SAM family protein [Desulfotignum phosphitoxidans]
Length = 505
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 20/137 (14%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIV--HRYPDR-ILLKLLHVCPVYCR 110
P+ R +P E + +PE R+ G+N P G+ H+ +LL++ C ++CR
Sbjct: 60 PVWRNHVPITEWIGDVPEIRD---GENLDCPHACGLCPDHQRETCCVLLEVTGQCNLHCR 116
Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
FCF T + V +GG+P + L ++++ R
Sbjct: 117 FCFADAAPALDPATETVKGWLDQL-----AVPGKTLVQLSGGEP-TVRDD-LPEIIRHAR 169
Query: 171 YI--KHVQI----LRFH 181
HVQ+ +R
Sbjct: 170 QAGCAHVQLNSNGIRLG 186
>gi|295114964|emb|CBL35811.1| Fe-S oxidoreductase [butyrate-producing bacterium SM4/1]
Length = 290
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 25/168 (14%)
Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
+GIV+R P ++++ C C FC M ++ V S + L +
Sbjct: 4 EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58
Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELI 197
+ +V GD L+L ++L +L +R + + +R S D R + E +
Sbjct: 59 GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPN--CVRVASYGTAQDILRKSEEEL 116
Query: 198 QCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
+ LKEAG + + E + E +L GI
Sbjct: 117 RQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEVGQKLKRCGIQ 164
>gi|256374624|ref|YP_003098284.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
43827]
gi|255918927|gb|ACU34438.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
43827]
Length = 341
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 47/226 (20%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C E + + +LS ++ + + + +V FTGG+PL+
Sbjct: 29 VSLTDKCNLRCTYCMPAEGLDWLRGPELLSDEELVRVIGIAVTRLGVTDVRFTGGEPLL- 87
Query: 158 SHKRLQKVLKT---LRYIKHVQI----LRFHSRVPIVDPQ----RINPELIQCLKEAGKP 206
+ L+ VL L + + +R R+N L +E
Sbjct: 88 -RRGLEDVLAATTALEPRPRTSMTTNGISLATRA-AGLKAAGLDRVNVSLDTLDRERF-- 143
Query: 207 VYIAIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
E + + +A ++ AG+ + SVL++G+NDD + L+
Sbjct: 144 ----------RELTRRDRLPDVLAGLAAAREAGLEPVKINSVLMRGVNDDEAV--ALVEF 191
Query: 261 FVELRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKEK 300
VE + + R + Q+I+ +L +
Sbjct: 192 AVEHG------YQLRFIEQMPLDPQHGWDRSEMVTAQEILDALGTR 231
>gi|114049235|ref|YP_739785.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-7]
gi|113890677|gb|ABI44728.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-7]
Length = 337
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + + LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179
>gi|283782458|ref|YP_003373213.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068]
gi|283440911|gb|ADB19353.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068]
Length = 391
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 33/190 (17%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTG-GDPLILSH 159
C + C FC + + + + E L + EK ++ ++ G G+PL
Sbjct: 143 GCAMGCVFCASG--LDGVDRNLTAGEIVEQMLLLQRLLPEKERLSHIVMMGMGEPLANID 200
Query: 160 KRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--- 212
L+ + + R I + + + + P + +L + + +++H
Sbjct: 201 HVLEALGEATREDGLGISP-RRITIST---VGLPAAL-DKLCNLEAKY--HLAVSLHAPN 253
Query: 213 ---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF-- 261
N + +A +G L + VLL G+ND P+ L
Sbjct: 254 NELRTRLVPINKAIGIEKVIESADRYFETSGRRLTFEYVLLAGVNDHPDHAQELAELLAG 313
Query: 262 --VELRIKPY 269
L + PY
Sbjct: 314 RTAMLNVIPY 323
>gi|289192435|ref|YP_003458376.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
gi|288938885|gb|ADC69640.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
Length = 377
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
EE+ EE D + + +KG ++++L + +C C +C E ++
Sbjct: 4 EEIEKYLEENFDKLPEGCKQCVKG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57
Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ + I+E V TGG+PL L R K LK L+ + FH+
Sbjct: 58 YANERLITTVEEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLKALKN----EFDEFHA 112
Query: 183 RVPIVDPQRINPELIQCLKEAGK 205
P+ IN E ++ LKEAG
Sbjct: 113 -HLYTTPETINEENLKLLKEAGL 134
>gi|260427313|ref|ZP_05781292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
gi|260421805|gb|EEX15056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
Length = 435
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVER--GVREITLLGQNVN 206
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ L +++ L I ++ +RF + P
Sbjct: 207 AYHGHDRGLAGLIRELAAIDGLERIRFTTSHPN 239
>gi|194290177|ref|YP_002006084.1| molybdenum cofactor biosynthesis protein a [Cupriavidus taiwanensis
LMG 19424]
gi|193224012|emb|CAQ70021.1| MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A [Cupriavidus taiwanensis
LMG 19424]
Length = 389
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ +LS ++ E + ++ TGG+
Sbjct: 62 ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 120
Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
PL+ K ++ +++ L I+ V + LR +RV +
Sbjct: 121 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 177
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
I+ + + + V +H E A+ + V+ +G ND
Sbjct: 178 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 223
Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284
+ + + R F I ++H++
Sbjct: 224 QEIVPMARHFRHSGII--LRFIEFMDVGASNHWQ 255
>gi|229917969|ref|YP_002886615.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
gi|229469398|gb|ACQ71170.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
Length = 360
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
P ++ ++ C + C C + + DTE A I+E + ++FTG
Sbjct: 10 PFIVIWEVTRACALSCVHCRAEAQFHRYENEL----DTEEGKALIREIHAMDNPILVFTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GDPL+ L ++ + R S P P R+ + ++ K AG +
Sbjct: 66 GDPLMRED--LFELTAYASSLGM----RV-SMTPSATP-RVTHDAVKRAKAAGLSRW 114
>gi|150390308|ref|YP_001320357.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
metalliredigens QYMF]
gi|229890435|sp|A6TR80|MIAB_ALKMQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149950170|gb|ABR48698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
metalliredigens QYMF]
Length = 476
Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ D ++G+ +Y + + ++ C +C +C G ++ S++ + +
Sbjct: 165 VWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRER-----SREVQEII 219
Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVP 185
++ K+ E+ G + + K L++ +LK L I+ ++ +RF + P
Sbjct: 220 DEVEELAKNGTKEITLLGQN-VNSYGKTLEEETDFGNLLKVLNKIEGIERIRFMTSHP 276
>gi|308051310|ref|YP_003914876.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
DSM 9799]
gi|307633500|gb|ADN77802.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
DSM 9799]
Length = 328
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C + + VL+ ++ E + ++ TGG+PL+ S
Sbjct: 16 MSVTDHCDFRCVYCMDEDPTFLPRDQVLTLEELHQIAQAFTE-LGVEKIRLTGGEPLVKS 74
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
L +++ + + ++ L SR+ + Q L+ AG K + I++
Sbjct: 75 D--LTYLVEQVAALPGLRDLCLTTNGSRL---------KKFAQPLQAAGLKRINISLDTL 123
Query: 215 HPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250
P F+ A I AG I L+ +V +KG NDD
Sbjct: 124 DPERFTAVTRNGKLERVLAGIDAAIEAGFERIKLN-TVAMKGSNDD 168
>gi|332799055|ref|YP_004460554.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
gi|332696790|gb|AEE91247.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
Length = 435
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 26/133 (19%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
HR R LK+ C ++C +C + + S+ + + Q K E++
Sbjct: 139 HRQKTRAFLKIQDGCNMFCSYC-----IIPYARGPVRSRSIDNIIDEAQSLAKDGFKEIV 193
Query: 149 FT-------GGDPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
T G D + + + + + I+ ++ +R S ++ + E ++
Sbjct: 194 LTGIHLGLYGRD---FKDENIHLLDVISRIADIEGIERIRLSS----IEAMELTDEFLKS 246
Query: 200 L---KEAGKPVYI 209
L K+ ++
Sbjct: 247 LCGIKKFCHHFHV 259
>gi|24213838|ref|NP_711319.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
str. 56601]
gi|81589771|sp|Q8F710|RIMO_LEPIN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|24194676|gb|AAN48337.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
str. 56601]
Length = 437
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112
I R+ P EL+ E D + + S ++ Y +K+ C C FC
Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165
Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165
FR + V S +L +DT A+ +I + ++ G D + L +
Sbjct: 166 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 216
Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ + I ++ILR + P + +LI+ + E K
Sbjct: 217 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252
>gi|113968617|ref|YP_732410.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-4]
gi|113883301|gb|ABI37353.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-4]
Length = 337
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + + LS + E ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179
>gi|125973459|ref|YP_001037369.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum ATCC
27405]
gi|256005355|ref|ZP_05430320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
2360]
gi|281417660|ref|ZP_06248680.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
JW20]
gi|238065327|sp|A3DDZ7|RIMO_CLOTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|125713684|gb|ABN52176.1| SSU ribosomal protein S12P methylthiotransferase [Clostridium
thermocellum ATCC 27405]
gi|255990674|gb|EEU00791.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
2360]
gi|281409062|gb|EFB39320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
JW20]
gi|316940304|gb|ADU74338.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
1313]
Length = 453
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155
LK+ C C +C + G + + +D + ++ + EVI D +
Sbjct: 154 AYLKISEGCDNRCTYCAIPYIRGPYRSRKM--EDIISEAEFLAG-KGVKEVILVAQDVTV 210
Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
K+L ++++ + I+ ++ +R P+ I+ ELI+ + K V Y+
Sbjct: 211 YGKDLYGQKKLVELVREVSGIEGIEWIRL----LYTYPEEIDEELIKEIANNEKVVKYLD 266
Query: 211 IHANHP 216
I H
Sbjct: 267 IPIQHA 272
>gi|78223881|ref|YP_385628.1| ribosomal RNA large subunit methyltransferase N [Geobacter
metallireducens GS-15]
gi|123742801|sp|Q39S71|RLMN_GEOMG RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|78195136|gb|ABB32903.1| 23S rRNA m(2)A-2503 methyltransferase [Geobacter metallireducens
GS-15]
Length = 346
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 48/252 (19%)
Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
DR L + C + C FC ++ L++ + + ++ + ++F G
Sbjct: 102 DRTTLCISSQVGCAMACEFCLTGTFRLTRN---LTAGEIVNQICAVRRDVPVRNIVFMGM 158
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL L V+K L+ I H L+F +R V L+ ++ G+ V + +
Sbjct: 159 GEPL----ANLDNVVKALKIILHDDGLQFSTRRVTVS----TSGLVPEMERLGREVTVNL 210
Query: 212 HANHPYEFSEEAIAAI---------SRLANAG----------IILLSQSVLLKGINDDPE 252
+ ++E I L +A I + V++KG+ND E
Sbjct: 211 AVS-LNATTDEVRDRIMPVNRRYPLRLLLDACRSYPLPGRRKITIE--YVMIKGLNDSLE 267
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSH----FRLTIEEGQKIVAS--LKEKISGLCQ 306
L++ ++ K +L H F+ + + S L + + + +
Sbjct: 268 DAKRLVKLLSDISSK------INLIPFNEHDGCSFKSPDQGAIDVFHSYLLSKHFTVITR 321
Query: 307 PFYILDLPGGYG 318
D+ G
Sbjct: 322 SSRGSDISAACG 333
>gi|325295010|ref|YP_004281524.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065458|gb|ADY73465.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 324
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 30/179 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQ--IWEVIFTGGDP 154
+ + C CR+C M K + S+ E ++ ++ I V TGG+P
Sbjct: 9 ISVTDRCNFRCRYC----MPEGTKKFIPHSEILRYEEITEIVRVFTEFGIDSVRLTGGEP 64
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
L+ K ++ ++ +R ++ ++ + + E ++ LKE G V I+I
Sbjct: 65 LV--RKGIESLIVQIRELEEIRDISLTTNGF------FLSEKVKSLKEHGLNRVNISIDT 116
Query: 214 NHPYEF-----SEEAI------AAISRLANAGI-ILLSQSVLLKGINDDP-EILANLMR 259
P +F + + + + G+ + +VL+KG ND E L
Sbjct: 117 LEPEKFGFITGTGDTRTLSRVLHGLEKAIEEGLNPVKVNTVLIKGFNDKEIESFVKLSE 175
>gi|291531886|emb|CBK97471.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
siraeum 70/3]
Length = 446
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ P L++ C C +C + G + + E A + ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197
Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D + L +LK L I ++ +R P+R+ ELI+ +K
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKELCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253
Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
K + YI I H E + ++L G++L + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307
>gi|222111161|ref|YP_002553425.1| molybdenum cofactor biosynthesis protein a [Acidovorax ebreus TPSY]
gi|221730605|gb|ACM33425.1| molybdenum cofactor biosynthesis protein A [Acidovorax ebreus TPSY]
Length = 378
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F + +LS ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176
PL+ L+ ++ L ++ ++
Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123
>gi|149200218|ref|ZP_01877240.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
HTCC2155]
gi|149136660|gb|EDM25091.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
HTCC2155]
Length = 335
Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 94 PDRIL-LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P R L L ++ C C +C R + + ++ L+ I + + +
Sbjct: 10 PMRDLRLSVIDACNFRCLYCMPPDRDYDFFKKNEMLSVNEAIR--LSEIFVQLGVRRIRL 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
TGG+PL+ L +++ + I ++ L +
Sbjct: 68 TGGEPLLRKD--LDQIIAGIAKIPELEDLAITT 98
>gi|295103385|emb|CBL00929.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii
SL3/3]
Length = 325
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 16/158 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + +C + CR+C + ++ VL+ ++ A + I V TGG+PL+
Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
K + +++ L+ ++ + + ++ +L L V I++ P
Sbjct: 71 RKNVAQLVAGLKATPGIRRVTLTTNAVLLA-----EQLPALLDAGLDSVNISLDTLRPEV 125
Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
+ + + +G+ + V G+N
Sbjct: 126 FRQITARDDFAAVQTGLQAALESGLPVKLNCVPQAGVN 163
>gi|225028441|ref|ZP_03717633.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
gi|224954239|gb|EEG35448.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
Length = 465
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIF 149
LK+ C C +C + G + +D + E ++ E
Sbjct: 163 TAYLKIAEGCNKRCTYCIIPYIRGHYR--SFPMEDLLEEARKLAEGGVKELILIAQETTV 220
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D K L ++L L I+ ++ +R P+ I ELI +K+ K
Sbjct: 221 YGMDCY--GRKALPELLTKLCEIEGIEWIRI----LYCYPEEITDELIAVMKKEKK 270
>gi|219669148|ref|YP_002459583.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
DCB-2]
gi|219539408|gb|ACL21147.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
DCB-2]
Length = 442
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+K+ C YC +C R + ++L ++ EA + EV+
Sbjct: 148 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 200
Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D + RL ++K + I+ ++ +R P+ ELI +KE K
Sbjct: 201 DTTRYGKDRYGEYRLPSLIKEIAGIEGIEWIRL----MYCYPELFTDELITVMKETPK 254
>gi|323704197|ref|ZP_08115776.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536263|gb|EGB26035.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 467
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C YC +C G + + D + +++ EV+ TG
Sbjct: 160 HTRAYLKIQDGCNQYCTYCIIPYARGPIRSRKPN--DIFDEVKRLRDN-GYKEVVLTGIH 216
Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
L + L ++K + I+ ++ +R S P + ++
Sbjct: 217 VASYGKDLENVDLLDIIKMIHEIEGIERIRLSSIEPTFL----TEDFVR 261
>gi|167749835|ref|ZP_02421962.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
gi|167657147|gb|EDS01277.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
Length = 480
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147
L + CP C +C + + L K+ + ++ S ++ V
Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
GG P LS +L +++ L + +R + P I + ++ LK G +
Sbjct: 217 YIGGGTPTTLSASQLDSLIEKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRR 274
Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
+ I P ++ + A+ R
Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292
>gi|291547922|emb|CBL21030.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus sp.
SR1/5]
Length = 231
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
L L+ C + C +CF E G +S + A+ Y+ E S +V+ T GG+PL+
Sbjct: 101 LMLVQGCNLACSYCFGDEGSYCDSG-KMSKETAFKAIDYLFEHSDADKVLITFFGGEPLL 159
Query: 157 LSHKRLQKVLK 167
+++++
Sbjct: 160 AVD-LMKEIIS 169
>gi|33469596|gb|AAQ19837.1| molybdenum cofactor biosynthesis protein A [Alcaligenes faecalis]
Length = 364
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131
P+ D + P++ + + + C C +C F V + +LS ++
Sbjct: 28 PLTDQHGRPVRDLR--------ISVTDRCNFRCTYCMPREVFDDRFVFLPRQDMLSFEEI 79
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
E LA I + ++ +GG+PL+ LQ ++ L +
Sbjct: 80 ER-LARIFVGLGVRKLRLSGGEPLMRKD--LQDLVAKLAQL 117
>gi|85858425|ref|YP_460627.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
gi|85721516|gb|ABC76459.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
Length = 369
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 32/209 (15%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
N SPL + + ++ C + C C G G LS+++++ L I
Sbjct: 2 NSSPLPSTLRM----VAWEVTRSCNLSCIHCRASAEKGPYAGE-LSTEESKNLLEEIAAF 56
Query: 142 SQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
S+ VI TGG+PL+ L L LR V + + + + +
Sbjct: 57 SRP-VVILTGGEPLLREDIYELAAYGDGLG-------LRM---VLATNGTLVTEGIARRM 105
Query: 201 KEAGKPVYIAIHANHP--------YEFSEEAIAAI---SRLANAGIILLSQSVLLKGIND 249
+E+G ++I + P + S A+ + L AG+ + + +
Sbjct: 106 RESGIQ-RVSISLDGPDAESHDAFRQMSGAFAGAMTGIAALKKAGMEFQVNTTIT---ST 161
Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAA 278
+ L+ +M V L +++
Sbjct: 162 NRHQLSAMMDLAVRLGAAAHHIFLLVPTG 190
>gi|114710|sp|P20714|ANSME_KLEAE RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME;
AltName: Full=Arylsulfatase-activating protein; AltName:
Full=Ser-type sulfatase-activating enzyme
gi|149165|gb|AAA25050.1| atsB protein [Klebsiella aerogenes]
Length = 405
Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
P+ SP+ + P + C + CR+C+ + + E +
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63
Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
IN + +E G + +++ N + + S + A GI LL Q V
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179
Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|160895257|ref|ZP_02076029.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50]
gi|156863136|gb|EDO56567.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50]
Length = 472
Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ D ++ L+++Q + T +
Sbjct: 83 LMSDYRSCTNKCMFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132
Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + + +++K L I + + ++C +H
Sbjct: 133 TDEDVDRIIKMQLAPI----NISIQT----------TNPDLRC---------KMLH---- 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
F+ + + + RL + + Q VL K +ND E+ ++
Sbjct: 166 NRFAGDRLKYLDRLFEGHVEMNGQIVLCKHVNDGTELERSIR 207
>gi|257438716|ref|ZP_05614471.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
prausnitzii A2-165]
gi|257198851|gb|EEU97135.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + +C + CR+C + ++ +L+ ++ LA + + + V TGG+PL+
Sbjct: 14 LSVTDLCNLRCRYCMPDGVDKLEREDILTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV---DPQRINPELIQC-LKEAGKPVYIAIHAN 214
K +++++K L+ I ++ + + ++ P + L + +
Sbjct: 71 RKGVEQLVKGLKAIPGIRKVTMTTNAVLLEQQLPALLEAGLDSVNISLDTLDPALFAKIT 130
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMR 259
EF A I +GI + V G+N+ E LA L +
Sbjct: 131 ARDEF-AAVQAGIHAALESGIPVKLNCVPQVGVNEGELEALAALAQ 175
>gi|313905328|ref|ZP_07838694.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
gi|313469798|gb|EFR65134.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
Length = 437
Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C +C +C G + ++ D + + S + EV+ T
Sbjct: 145 HTRAFIKVQDGCNQFCTYCIIPYARGRVRSRKIA--DVYEEVKRLAA-SGVKEVVVTGIH 201
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + + L +++ + ++ ++ +R S ++P I+ + I+ L E K
Sbjct: 202 VCSYGKD--LGEGEDLLALIRAVNEVEGIERIRLGS----LEPGSISEDFIKALSEMPK- 254
Query: 207 VYIAIHA 213
+ H
Sbjct: 255 --VCPHF 259
>gi|225011708|ref|ZP_03702146.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
gi|225004211|gb|EEG42183.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
Length = 450
Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 33/163 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R LK+ C C +C Q V S E + +++ S + E++ TG
Sbjct: 154 RTRAFLKVQDGCDYKCTYCTI-----PQARGVSRSDTLENIINNVKKIGDSGLREIVLTG 208
Query: 152 ---GDPL---ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAG 204
GD + K L+ + I V+ + R R+ ++P +N ++I + +
Sbjct: 209 VNIGDYGKGEFGNKKHQHTFLELINAIDMVKSIDRI--RISSIEPNLLNDDIIDFVSGSN 266
Query: 205 KPVYIAIHANHPYE--------------FSEEAIAAISRLANA 233
+ H + P + + + ++R+ A
Sbjct: 267 R---FVPHFHIPLQSGSDRILKSMRRRYLTPLYLQRVARIKEA 306
>gi|210610113|ref|ZP_03288275.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787]
gi|210152625|gb|EEA83631.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787]
Length = 507
Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 41/172 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L+ C C FCF +M + T+ Y ++ + F G+ + L
Sbjct: 118 LMSEYRTCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 164
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
++ +L + +I++ H + Q NPEL + L H
Sbjct: 165 TNMKLPDI---------ERIIQMHLAPINISVQTTNPELRCKML-----------H---- 200
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELR 265
F+ E + + L I + Q V+ K +ND E + +L + +R
Sbjct: 201 NRFAGEKLKFLDILYENHIEMNGQVVVCKNVNDGKELERTIDDLSKFLPFMR 252
>gi|21674009|ref|NP_662074.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS]
gi|81791215|sp|Q8KD71|RLMN_CHLTE RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|21647156|gb|AAM72416.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS]
Length = 374
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 42/184 (22%)
Query: 104 VCPVYCRFC------FRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154
CP+ C FC FRR + S+ L K+ + + + ++F G G+P
Sbjct: 138 GCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQK-----RHWRGLTNIVFMGMGEP 192
Query: 155 LILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L+ L+ + TL + + + + P ++ + +G +
Sbjct: 193 LLNLDNVLESI-GTLTEKDYQFSISERKITIST---VGLPVEMD-----RIARSGLKTKL 243
Query: 210 AIHANHPYEFSEE---------AIAAISRLANAGIILLSQSV-----LLKGINDDPEILA 255
AI + + E + +++ N+ + SQ V LL+GIND PE
Sbjct: 244 AISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDAR 303
Query: 256 NLMR 259
L+R
Sbjct: 304 KLVR 307
>gi|291556571|emb|CBL33688.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
siraeum V10Sc8a]
Length = 446
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ P L++ C C +C + G + + E A + ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197
Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D + L +LK L I ++ +R P+R+ ELI+ +K
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253
Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
K + YI I H E + ++L G++L + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307
>gi|167750131|ref|ZP_02422258.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
gi|167656874|gb|EDS01004.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
Length = 446
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ P L++ C C +C + G + + E A + ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197
Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D + L +LK L I ++ +R P+R+ ELI+ +K
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253
Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
K + YI I H E + ++L G++L + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307
>gi|91201666|emb|CAJ74726.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 356
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQ--IW 145
IV +Y + + CP C FC + ++ G+ ++ K+ +A Y++ + I
Sbjct: 22 IVKKYSNIPIFIPELACPHQCVFCNQAKISGTY--SIPQPKEIRHIVAQYLETIPENRII 79
Query: 146 EVIFTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLK 201
+ F GG L ++ LK +K+ V +R +R P IN +++ LK
Sbjct: 80 NIAFFGG-SFTGIPVDLQEQYLKEAYGFVKNGKVSGIRLSTR-----PDYINETILELLK 133
Query: 202 EAGKPVY 208
+ G
Sbjct: 134 KYGVTTI 140
>gi|331269617|ref|YP_004396109.1| MiaB family RNA modification protein [Clostridium botulinum
BKT015925]
gi|329126167|gb|AEB76112.1| RNA modification enzyme, MiaB family [Clostridium botulinum
BKT015925]
Length = 444
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 22/119 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTG 151
+++ C +C +C ++ G + + S K+ A + E+I G
Sbjct: 147 AYIRISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVG 198
Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D I + +L ++++ + I+ ++ +R V P+ I ELI+ +K K
Sbjct: 199 QDTAIYGRDIYNENKLPELIRAISEIEAIEWIR----VLYTYPEEITDELIEEIKSNDK 253
>gi|327542013|gb|EGF28512.1| ribosomal RNA large subunit methyltransferase N [Rhodopirellula
baltica WH47]
Length = 365
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%)
Query: 94 PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149
P R + V C + C FC + + + E L + ++ ++
Sbjct: 116 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 173
Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202
G G+PL L VL L + L P+RI P I L
Sbjct: 174 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 222
Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
AG P + +++H N AA +G L + VLL GIN
Sbjct: 223 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 282
Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297
D E L + V + + PY + AG +R I + I+ S
Sbjct: 283 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 333
>gi|317056861|ref|YP_004105328.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
gi|315449130|gb|ADU22694.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
Length = 443
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 20/160 (12%)
Query: 79 GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
G P++G ++ P +K+ C C +C + G K +D
Sbjct: 128 GSKTDLPMEGGRLISTEPFFAYIKIAEGCSNCCTYCAIPAIRG--KFRSRKMEDILEEAK 185
Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
++ E V+ G D + L ++LK L I + +R P+
Sbjct: 186 WLAEHGVTELVVIAQDTTRYGED--LYGKSMLPELLKKLCEIDGFKWIR----TLYSYPE 239
Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
RI+ E I L K V YI + H + E + ++R
Sbjct: 240 RISDEFIDVLASEEKLVKYIDMPIQH---CNAEILKRMNR 276
>gi|251778072|ref|ZP_04820992.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243082387|gb|EES48277.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 472
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
E IL E D + H K I + Y +RI+ L L + C C +C
Sbjct: 49 SHREAAILLECDLDEEIEKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165
>gi|183220785|ref|YP_001838781.1| putative MiaB-like tRNA modifying enzyme [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910885|ref|YP_001962440.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|238066359|sp|B0SGD8|RIMO_LEPBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|238066364|sp|B0SPT9|RIMO_LEPBP RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|167775561|gb|ABZ93862.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779207|gb|ABZ97505.1| Putative MiaB-like tRNA modifying enzyme [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 448
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 17/161 (10%)
Query: 49 PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
++ I R+ P E L E ED + S KGI + +K+ C
Sbjct: 115 KYDKAGEILRKNFPL--EFKDLTEFNEDLLERLTTS--KGIENYSKPYSYVKISDGCNRG 170
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQK 164
C FC + G + T + + LA +I + +F G D +L
Sbjct: 171 CHFCIIPNLRGKYRDTDSNDVLEQTKLAVKAGSKEICLVSQDTVFYGKD-----TDKLMD 225
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+++++ ++ ++ILR + P + +L+ +E K
Sbjct: 226 LVRSVAAVEGLEILRL----LYLYPDKKTEKLLDLYREIPK 262
>gi|160915016|ref|ZP_02077229.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
gi|158432815|gb|EDP11104.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
Length = 435
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 12/125 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
+ R LK+ C +C +C G+++ L+ + + + E++ TG
Sbjct: 141 HQTRAFLKIQDGCNQFCSYCIIPYARGAER--SLAEDQVIESAKQLVNNQHL-EIVLTGI 197
Query: 152 --GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G + + L +LK L + ++ +R S ++ I+ ELI +KE + +
Sbjct: 198 HTGRYGNGTGRNLLDLLKRLVAEVPKLRRIRISS----IEMNEISDELIAFMKEEPR-IA 252
Query: 209 IAIHA 213
+H
Sbjct: 253 RHLHI 257
>gi|39997663|ref|NP_953614.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
gi|39984555|gb|AAR35941.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
gi|298506603|gb|ADI85326.1| MiaB-like tRNA-modifying enzyme [Geobacter sulfurreducens KN400]
Length = 434
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 17/127 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R L++ + C +C +C G + +D + EV+ T
Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPHARGRSRSVPF--RDVLEGIGTF-AYQGFREVVLTGIH 196
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + L +L+ V LR S V+P I+ LI + +
Sbjct: 197 LGAYGAD--LEPPASLLDLLEAADAEALVPRLRVGS----VEPHEISDGLIALMARSPV- 249
Query: 207 VYIAIHA 213
+ +H
Sbjct: 250 ICPHLHI 256
>gi|32477801|ref|NP_870795.1| Fe-S-oxidoreductase [Rhodopirellula baltica SH 1]
gi|81658686|sp|Q7UHU7|RLMN_RHOBA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|32448358|emb|CAD77872.1| conserved hypothetical protein-putative Fe-S-oxidoreductase
[Rhodopirellula baltica SH 1]
Length = 371
Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%)
Query: 94 PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149
P R + V C + C FC + + + E L + ++ ++
Sbjct: 122 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 179
Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202
G G+PL L VL L + L P+RI P I L
Sbjct: 180 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 228
Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
AG P + +++H N AA +G L + VLL GIN
Sbjct: 229 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 288
Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297
D E L + V + + PY + AG +R I + I+ S
Sbjct: 289 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 339
>gi|329960232|ref|ZP_08298674.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
gi|328532905|gb|EGF59682.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
Length = 439
Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 14/151 (9%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS R LK+ C YC +C + + E A
Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAE 193
Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E++ TG GD + + ++K L ++ ++ R S ++P + E+I+
Sbjct: 194 GGREIVLTGVNIGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTEEIIEF 249
Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ + + H + P S+E + + R
Sbjct: 250 VSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277
>gi|325525113|gb|EGD03003.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. TJI49]
Length = 355
Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLARL 116
>gi|228469810|ref|ZP_04054768.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
gi|228308649|gb|EEK17400.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
Length = 449
Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
R LK+ C YC +C G S+ G++ S +A + E+I TG
Sbjct: 160 RTRHFLKVQDGCNYYCTYCTIPAARGVSRNGSIASLVAQAERVAELGG----REIILTGV 215
Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + L ++L L + + R S ++P+ + PE+IQ + E +
Sbjct: 216 NIGDFGRSTGETLLELLHRLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 268
Query: 210 AIHA 213
H
Sbjct: 269 MPHF 272
>gi|283785773|ref|YP_003365638.1| hypothetical protein ROD_20861 [Citrobacter rodentium ICC168]
gi|282949227|emb|CBG88837.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 436
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 28/161 (17%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY L++ C C FC T E +A I + F
Sbjct: 150 RYAPLALVQYSRGCRFACDFCSIHAFYPDGVRTRP----VEQIMAEIDALPGDRFIAFV- 204
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
D L S K+L+ +L+ L I ++ R+ ++ +D R + L+ L +AG +
Sbjct: 205 DDNLFASRKKLESLLEAL--IP-LKR-RWGCQI-SIDVAR-DEALLDRLAQAGCGFVLMG 258
Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILL 238
NH + + I L GI +
Sbjct: 259 FESLNPANLRQMGKQWNHA---AGDYRRVIRALHARGICVY 296
>gi|29832258|ref|NP_826892.1| hypothetical protein SAV_5715 [Streptomyces avermitilis MA-4680]
gi|29609377|dbj|BAC73427.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 723
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 97 ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148
++LK+ C + C C+ + + +++ + + + + + VI
Sbjct: 13 LVLKIHSRCNLACDHCYVYEHEDQSWQARPVLIAEETLDKVAHRLAAYTVDRKLESVSVI 72
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI-KHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG+PL++ RL+ + LR + + LR H+ R+N ++ LKE
Sbjct: 73 LHGGEPLLVGPTRLRNICAQLRSVLDPLTTLDLRIHTNGV-----RLNRAHLEILKEFDV 127
Query: 206 PVYIAI 211
V I++
Sbjct: 128 KVGISL 133
>gi|332300583|ref|YP_004442504.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica DSM 20707]
gi|332177646|gb|AEE13336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica DSM 20707]
Length = 157
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C E GT L+ + + I + + +GGDP + S + L
Sbjct: 25 GCSHHCPGCHNPESHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDP-MFSPEELL 83
Query: 164 KVLKTLRY 171
+LK L+
Sbjct: 84 TLLKRLKS 91
>gi|319650007|ref|ZP_08004156.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
2_A_57_CT2]
gi|317398188|gb|EFV78877.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
2_A_57_CT2]
Length = 338
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 32/171 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C++C E+ G K +LS ++ E LA I + ++ TGG+
Sbjct: 19 ISVIDRCNFRCQYCMPAEVFGPDFAFLPKNELLSYEEIER-LAKIFVSLGVEKIRLTGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + K++K L I+ ++ + + ++ P+ LKEAG V + I
Sbjct: 78 PLMRKD--MPKLVKMLSDIEGLKDIGLTTNG-VLLPKHAKD-----LKEAGL-VRVNISL 128
Query: 214 NHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDD 250
+E + I AG+ + V+ KG+ND
Sbjct: 129 ---DSLDDELFGKINGRNVGVKPVLKGIEAAKEAGLGVKLNMVVKKGLNDS 176
>gi|255280937|ref|ZP_05345492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
DSM 14469]
gi|255268385|gb|EET61590.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
DSM 14469]
Length = 518
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +YP + + ++ C +C +C + G ++ ++ + + + EV+
Sbjct: 221 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--REILREIERLAAD-GVVEVM 277
Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G + P+ ++L+ + I ++ +RF + P+ ++ ELI+
Sbjct: 278 LLGQNVNSYGKNLPEPMSF-----AQLLREVEKIDGIKRIRFMTSH----PKDLSDELIE 328
Query: 199 CLKEAGK 205
+ + K
Sbjct: 329 VMASSEK 335
>gi|53713716|ref|YP_099708.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|60681987|ref|YP_212131.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
gi|81314949|sp|Q5LCF8|RIMO_BACFN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|81382384|sp|Q64TK5|RIMO_BACFR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|52216581|dbj|BAD49174.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|60493421|emb|CAH08207.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
Length = 432
Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P EL + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242
>gi|322806790|emb|CBZ04359.1| fe-S oxidoreductase, related to NifB/MoaA family with PDZ
N-terminal domain [Clostridium botulinum H04402 065]
Length = 444
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209
>gi|229825163|ref|ZP_04451232.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
49176]
gi|229790535|gb|EEP26649.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
49176]
Length = 479
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 92 RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQI 144
++ + ++ L + H C + CR+CF E ++S + +AA ++ +
Sbjct: 101 KHRNTVVKALCLNIAHDCNLACRYCFAGEGEYQGDRGMMSYEVGKAAFDFLIKNSGHRKN 160
Query: 145 WEVIFTGGDPLI--LSHKRLQKVLKTLRYIKHVQILRF 180
EV F GG+PL+ + K L + L I H + RF
Sbjct: 161 LEVDFFGGEPLMNWNTVKMLVAYGRELEKI-HDKNFRF 197
>gi|226949876|ref|YP_002804967.1| hypothetical protein CLM_2825 [Clostridium botulinum A2 str. Kyoto]
gi|226844173|gb|ACO86839.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
Length = 454
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219
>gi|182701775|ref|ZP_02615257.2| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|182668614|gb|EDT80593.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
Length = 454
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219
>gi|170760297|ref|YP_001787837.1| hypothetical protein CLK_1904 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407286|gb|ACA55697.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 444
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209
>gi|153939159|ref|YP_001391818.1| hypothetical protein CLI_2583 [Clostridium botulinum F str.
Langeland]
gi|152935055|gb|ABS40553.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295319843|gb|ADG00221.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 444
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209
>gi|148380477|ref|YP_001255018.1| hypothetical protein CBO2520 [Clostridium botulinum A str. ATCC
3502]
gi|153931168|ref|YP_001384701.1| hypothetical protein CLB_2397 [Clostridium botulinum A str. ATCC
19397]
gi|153937400|ref|YP_001388222.1| hypothetical protein CLC_2379 [Clostridium botulinum A str. Hall]
gi|148289961|emb|CAL84074.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152927212|gb|ABS32712.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152933314|gb|ABS38813.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 444
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L + L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209
>gi|24211989|sp|Q8Y0K4|MOAA_RALSO RecName: Full=Molybdenum cofactor biosynthesis protein A
Length = 345
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ Q +LS ++ E + E + ++ TGG+
Sbjct: 20 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 78
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 79 PLLRKDIERLVEMLARL 95
>gi|317125950|ref|YP_004100062.1| radical SAM protein [Intrasporangium calvum DSM 43043]
gi|315590038|gb|ADU49335.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043]
Length = 406
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 38/184 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152
P + ++ C + C+ C M G+ G L+ + + + + + ++ TGG
Sbjct: 18 PMLVFWEVTRACQLACKHCRANAMAGALPGE-LNHEQGLDLIDQVAAFGRPYPILVLTGG 76
Query: 153 DPLILSHKRLQKVLK--TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
D L+ + ++++ R I P V PQ + PE I + ++G
Sbjct: 77 DCLLRPD--IWELVEASRARGIPTAL-------SPSVTPQ-LTPETIARMVDSGINAVSI 126
Query: 209 ---------------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
I H + I AI L++AG+ + + ++K D+
Sbjct: 127 SLDGACAATHDGVRGIPGHF-------ADTIPAIRALSDAGLTVQINTTVMKSNLDELAD 179
Query: 254 LANL 257
+A L
Sbjct: 180 VAKL 183
>gi|18976462|ref|NP_577819.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM
3638]
gi|24211985|sp|Q8U4J5|MOAA_PYRFU RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|18892001|gb|AAL80214.1| molybdenum cofactor biosynthesis protein [Pyrococcus furiosus DSM
3638]
Length = 307
Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 44/172 (25%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + C +C R ++ ++ E + I + I V TGG+P +
Sbjct: 15 ISLTKECNLNCFYCHREGQ--QDGERTMTPEEIERIVR-IASRLGIRNVKLTGGEPTVRP 71
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL----------IQCLKEAGKPVY 208
+ I +Q +R P ++ + + LKEAG
Sbjct: 72 D---------IYEI--IQRIR---------PYVVDLSMTTNGTTLYASAEKLKEAGLD-R 110
Query: 209 IAIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ I + ++ + I R N + V+++GINDD
Sbjct: 111 VNISLDTLDRKKYKMITGYDVLDQVLKGIRRATNLFYPVKLNMVVMRGINDD 162
>gi|332158286|ref|YP_004423565.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
gi|331033749|gb|AEC51561.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
Length = 306
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 32/166 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C + C +C R + +++ + E + I + I +V TGG+P I
Sbjct: 15 ISLTKECNLSCFYCHREGQ--GEGEREMTADEIERIVK-IASRLGIRKVKLTGGEPTIRK 71
Query: 159 HKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAG------------- 204
+++ +R I +V L + + L + LKEAG
Sbjct: 72 D-----IIEIVRKIRPYVVDLSLTTNGTTLY------SLAEKLKEAGLDRVNISLDTLDR 120
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
K + + ++ + I + + V+++GINDD
Sbjct: 121 KKYKMITGFD----VLDQVLKGIRKATKLFYPVKLNMVVMRGINDD 162
>gi|295702571|ref|YP_003595646.1| hypothetical protein BMD_0385 [Bacillus megaterium DSM 319]
gi|294800230|gb|ADF37296.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 372
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S ++ + L H + +R +IN L L + P +H +
Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136
Query: 215 H 215
H
Sbjct: 137 H 137
>gi|253565664|ref|ZP_04843119.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764040|ref|ZP_06092608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
gi|251945943|gb|EES86350.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263256648|gb|EEZ27994.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
Length = 432
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P EL + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242
>gi|85859749|ref|YP_461951.1| radical SAM protein [Syntrophus aciditrophicus SB]
gi|123752486|sp|Q2LUM5|RLMN_SYNAS RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|85722840|gb|ABC77783.1| radical SAM family enzyme [Syntrophus aciditrophicus SB]
Length = 348
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG-G 152
+ C + CRFCF G ++ S Y+ E +I ++ G G
Sbjct: 105 TACISTQVGCHMGCRFCFTARQ-GFRRNLKPSEITGQLTMLQFYLPEGPEIKNIVMMGMG 163
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
+PL L+ + R I L F +R + I P +++ G+ + I
Sbjct: 164 EPLANYRNTLKAI----RIITSDYGLGFSTRKITLSTSGITP----MIEQLGRDLCINLA 215
Query: 211 IHANHP-----YEFSEEAIAA-ISRLANA-------GIILLS-QSVLLKGINDDPEILAN 256
I N P E + RL A G +L+ + +L+ G+N P
Sbjct: 216 ISLNAPTDSIRSELMPVNRKYPLDRLLQACRNYPMPGRRMLTFEYILIDGVNSSPAHAEM 275
Query: 257 LMRTFVELRIK 267
L R +R K
Sbjct: 276 LCRLLKGIRCK 286
>gi|294497200|ref|YP_003560900.1| hypothetical protein BMQ_0384 [Bacillus megaterium QM B1551]
gi|294347137|gb|ADE67466.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 372
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
+S ++ + L H + +R +IN L L + P +H +
Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136
Query: 215 H 215
H
Sbjct: 137 H 137
>gi|111225093|ref|YP_715887.1| hypothetical protein FRAAL5734 [Frankia alni ACN14a]
gi|122953811|sp|Q0RDV0|RIMO_FRAAA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|111152625|emb|CAJ64366.1| Conserved hypothetical protein [Frankia alni ACN14a]
Length = 545
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C FC FR V VL+ + A + G
Sbjct: 189 AALKISSGCDRRCAFCAIPSFRGSHVSRPADDVLAEAEWLAGEGARELVLVSENSTSYGK 248
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
D L + L+K+L L + + +R + P + P L++ L G Y+
Sbjct: 249 D---LGDLRALEKLLPQLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 301
Query: 211 IHANHPYEFSEEAIAAISR 229
+ H S + + R
Sbjct: 302 LSFQHA---SPAVLRRMRR 317
>gi|301057214|ref|ZP_07198343.1| radical SAM domain protein [delta proteobacterium NaphS2]
gi|300448665|gb|EFK12301.1| radical SAM domain protein [delta proteobacterium NaphS2]
Length = 341
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 26/191 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
+L C + C C GS++G DT+ L +Q+ Q+ VI TGG+PL
Sbjct: 3 WELTRKCNLNCVHC----RAGSERGPYPGELDTKKCLEILQQIQQVGNPIVILTGGEPL- 57
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L++ + L LR + ++ PQRI +K + A
Sbjct: 58 -----LREDIFDLAKAGTEMGLRMVMATNGTLMTPQRIAQMKASGIKRLSISIDGATAEQ 112
Query: 215 HP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIND-----DPEILANLMRTFVELRIK 267
H + A+ GI LL++ L IN + L ++ V+L
Sbjct: 113 HDAFRKVPGAFERAME-----GIGLLNEHGLEFQINTTVSRHNVNELEKILNLTVKLGAV 167
Query: 268 PYYLHHPDLAA 278
+++
Sbjct: 168 AHHIFLLVPTG 178
>gi|255009413|ref|ZP_05281539.1| putative oxidoreductase [Bacteroides fragilis 3_1_12]
gi|313147172|ref|ZP_07809365.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135939|gb|EFR53299.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 432
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERVSEIPGVEWIRLH----YAYPAHFPEDLFRVMRER 242
>gi|168187871|ref|ZP_02622506.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
gi|169294276|gb|EDS76409.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund]
Length = 433
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C + + + EVI +G D
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-PFARGAVCSKNPKIVIDEVKK-LAAH-GFKEVILSGID 197
Query: 154 PLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206
L +LK + I + +R S I PE +++ G
Sbjct: 198 ISSYGVDLEGDWNLLNILKEIDKIDGITRVRIGS---------IGPEFFNEDRIRQIGNL 248
Query: 207 VYIAIHA 213
+ H
Sbjct: 249 KKLCPHF 255
>gi|256811095|ref|YP_003128464.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
gi|256794295|gb|ACV24964.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
Length = 426
Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 15/124 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
+++ CP C FC + G + + E Y I + + ++ F +
Sbjct: 177 IEITRGCPYSCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232
Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L+ +++K+L+ +R I + F + V P+ +N E + + +
Sbjct: 233 YGSKDGKTLNIDKIEKLLENIREILGKDGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292
Query: 208 YIAI 211
+ I
Sbjct: 293 NLVI 296
>gi|229082873|ref|ZP_04215297.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
Rock4-2]
gi|228700411|gb|EEL52973.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
Rock4-2]
Length = 462
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L
Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ + + TGGD + + L+++L
Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190
>gi|221642191|ref|YP_002533278.1| ywiA protein [Bacillus cereus Q1]
gi|221243126|gb|ACM15835.1| ywiA protein [Bacillus cereus Q1]
Length = 462
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L
Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ + + TGGD + + L+++L
Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190
>gi|170696802|ref|ZP_02887909.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
C4D1M]
gi|170138291|gb|EDT06512.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
C4D1M]
Length = 369
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +L+ ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLTFEEIERLARLFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ +++ L +
Sbjct: 100 PLL--RKNLEFLIERLAQL 116
>gi|206973072|ref|ZP_03233994.1| radical SAM domain protein [Bacillus cereus AH1134]
gi|206731956|gb|EDZ49156.1| radical SAM domain protein [Bacillus cereus AH1134]
gi|262358192|gb|ACY56718.1| ThnB [Bacillus thuringiensis]
Length = 459
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L
Sbjct: 103 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 160
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
+ + + TGGD + + L+++L
Sbjct: 161 DL-NNIGVKLIELTGGDITVHPN--LKEIL 187
>gi|114766591|ref|ZP_01445547.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelagibaca bermudensis
HTCC2601]
gi|114541207|gb|EAU44259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. HTCC2601]
Length = 435
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 5/104 (4%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L + C +C FC G++ + + + A ++ + ++ +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVERGVRELTLLGQNVNAY 208
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ L +++ L I ++ +RF + P ++ +LI
Sbjct: 209 HGHDRGLAGLIRELAKIDGLERIRFTTSHPND----MDDDLIAA 248
>gi|194466736|ref|ZP_03072723.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
100-23]
gi|194453772|gb|EDX42669.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
100-23]
Length = 332
Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R D + L + C + C +C + + ++S + + + +V
Sbjct: 9 QRKIDYLRLSITDRCNLRCVYCMPAAGLDFFSQDKIMSQDEIVRLVQNFAR-LGVTKVRL 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PL+ L ++ +R I + +
Sbjct: 68 TGGEPLLRRD--LATIIYRIRQIPEITDI 94
>gi|330838563|ref|YP_004413143.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
ATCC 35185]
gi|329746327|gb|AEB99683.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
ATCC 35185]
Length = 328
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R + + + + C + CR+C + V +LS ++ + + + I +V
Sbjct: 6 RRKIEYVRISVTDRCNLRCRYCMPADGVEKLSHADILSFEEIVRVVRALAQ-LGIRKVRL 64
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
TGG+PL+ + + +++ ++ ++ ++ + + + +L + L+ AG +
Sbjct: 65 TGGEPLL--RRGVVDLVREIKAVEGIERVALTTNGV------LLADLAEELRAAGLD-GV 115
Query: 210 AIHANHPYE------------FSEEAIAAISRLANAGIILLSQSVLLKGIN 248
I + E + AG+ V LKG+N
Sbjct: 116 NISLDTLAEDAFYDITRRSASLLSVVRQGMEAALAAGLKTKLNCVPLKGVN 166
>gi|315650922|ref|ZP_07903963.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
DSM 3986]
gi|315486836|gb|EFU77177.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
DSM 3986]
Length = 323
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R D + + + + C C +C T+ + + A A K I + TG
Sbjct: 7 RKIDYMRISVTNRCNFRCTYC--MPETKKVDDTLSLDEIYQVAFA--ASKCGITKFKITG 62
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+PL+ + ++ L I V+ + + + + L +AG
Sbjct: 63 GEPLV--RDGIVDFIRRLHDIDSVKDITMTTNGFYLYKY------AKSLADAGLSSVNIS 114
Query: 212 HANHPYE----FSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250
+ E + + + I+ AG+ +VL +G+N+D
Sbjct: 115 LDSLKKERFIKITGVDALSDVVKGINEAKRAGLSTKINTVLQRGVNED 162
>gi|87119366|ref|ZP_01075264.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
gi|86165757|gb|EAQ67024.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
Length = 438
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 15/123 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++ C YC FC G + + E + + E+ G +
Sbjct: 135 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFTDILVEVMQ---LAEQGVREIHLLGQNVNA 191
Query: 157 L-------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L V+ + I V+ +RF + P+ LI+ + K +
Sbjct: 192 YRGVDNEGTESDLADVISAIAQIDGVERIRFTTSHPV----EFTDSLIEAFRNIPK-LVS 246
Query: 210 AIH 212
+H
Sbjct: 247 HLH 249
>gi|320161621|ref|YP_004174846.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
gi|319995475|dbj|BAJ64246.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
Length = 798
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + CP+ C C+ R G + K E A ++ + TGG+PL+
Sbjct: 451 LHITFECPLRCNHCYARG--GRHSPAFPAEKAIELAQQ--ASRAGFRHFVITGGEPLVHP 506
Query: 159 HKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ +L+ L ++ + +R R +V P ++ E ++ L A V +++
Sbjct: 507 --EIFPLLEHLEGLQQDLSPMRIVLRTSLVSP--LSDEPMRLLANAPHEVVVSL 556
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 15/150 (10%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLI 156
++ CP C++CF QK ++ + E +++ E+ E+ F GG+PL
Sbjct: 8 MIVPSSGCPASCQYCFGPH----QKDKTMNKQVLERTASWLGEEKASTLEITFHGGEPLT 63
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----H 212
K + L+ + +RF+ + + +N LI E + ++ H
Sbjct: 64 AGVKFFRNAFDVLQNQNPEKNIRFNLQSNLWL---LNDALIDLFAEHRVSMGTSLDGPEH 120
Query: 213 ANHPYEFSEEAIA---AISRLANAGIILLS 239
N I + G+ +
Sbjct: 121 INDAQRGKGYFRRTMLGIEKARRKGLAVGC 150
>gi|307730932|ref|YP_003908156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1003]
gi|307585467|gb|ADN58865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1003]
Length = 461
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAFRGALTLGSSEIADFATLIEYVAEIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265
>gi|282600941|ref|ZP_05980225.2| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
15176]
gi|282570102|gb|EFB75637.1| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
15176]
Length = 465
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 8/114 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C C +C R + ++ +I +
Sbjct: 174 HTRAFVKVEDGCNRRCAYCVIPRARGPVRSREESSILQELHRLTE--AGYKEIVLTAISL 231
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
S L ++++ + V+ LR S +DP ++ E+I L K
Sbjct: 232 PSYGTDSGTSLVELVEKAAAVPGVERLRLGS----LDPDMLHDEVILRLSRVKK 281
>gi|222445702|ref|ZP_03608217.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
DSM 2375]
gi|261349749|ref|ZP_05975166.1| putative molybdenum cofactor biosynthesis protein A
[Methanobrevibacter smithii DSM 2374]
gi|222435267|gb|EEE42432.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
DSM 2375]
gi|288861704|gb|EFC94002.1| putative molybdenum cofactor biosynthesis protein A
[Methanobrevibacter smithii DSM 2374]
Length = 309
Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%)
Query: 92 RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y IL + + + C C +C +++ + I + + ++
Sbjct: 9 KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
+GG+PLI + +++ + + I I + + + LKEAG V
Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116
Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
I++ +P E A I + G+ + VL+KGIN++ + ++
Sbjct: 117 NISLDTLNPETYKKVTTKNLLESAKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174
Query: 259 RTFVELRIK 267
E I
Sbjct: 175 EFCKEHGII 183
>gi|238924259|ref|YP_002937775.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
gi|238875934|gb|ACR75641.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
Length = 434
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)
Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
L E D + D G H + R +K+ C +C +C G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
+ ++ A + + EV+ TG LS L ++++ +
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEAVGLLELIQAVNA 221
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+K ++ +R S ++P+ + L + K I H
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256
>gi|256830160|ref|YP_003158888.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579336|gb|ACU90472.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 399
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 40/212 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C + +G + DT A A I Q+ +IFTGGDP++
Sbjct: 57 WEVTRSCNLACKHCRAEAHLEPYEGEL----DTAEAKALIDTFPQVGNPIIIFTGGDPMM 112
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS-RVP--IVDPQ--RINPELIQCLKEAGKPVYIAI 211
+ +++R+ + + ++ P I P+ + ++EAG +I
Sbjct: 113 RADVY--------------ELIRYATDKGLRCVMSPNGTLITPDTARQMREAGVQ-RCSI 157
Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ P E +E I L +AGI + + + + + +L
Sbjct: 158 SIDGPDAESHDEFRGVQGAFDASMRGIQYLKDAGIEFQVNTTVTRANLGSFKKIFDLCE- 216
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
+ +++ + + GQ+
Sbjct: 217 --RIGAVAWHIFLLVPTGRAAQLGAEVITGQE 246
>gi|332797245|ref|YP_004458745.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
gi|332694980|gb|AEE94447.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
Length = 351
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 62/298 (20%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R P + ++ CP+ C+ C R + L++ + + L I ++ V+FTG
Sbjct: 5 RAPHLVFWEVTKACPLACKHC-RANAIQDPLPGELTTAEGKKLLEEISTFGKV-VVVFTG 62
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIA 210
GDPL S + +++ + + V + P P ++N + I+ +KE+G Y++
Sbjct: 63 GDPL--SRDDIFELMDYAKQLGLVTSI-----APA--PSYKLNEDTIRKIKESGVT-YMS 112
Query: 211 IHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDDPEILANL 257
I + E + L G+I+ +++ KG L +
Sbjct: 113 ISLDGAK---PETHDWLRGLTSYKYAINGIKEGLKQGLIVQVNTLIWKG---SYPELPQI 166
Query: 258 MRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP-- 314
+ +L +K + + G+ + E +K+V L E +S ++ P
Sbjct: 167 AKILHDLGVKVWEIFFLIPVGRGSIELDIPKENYKKVVNFLLE-VSKYNIIVRTVEGPFF 225
Query: 315 ------------------------GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
G K+ +D + + + YP
Sbjct: 226 RRAKLEYPEGFEDNELIEELRKLLGKPPKMDVDKSIVPTRDGSGVIFISYDGEI--YP 281
>gi|291531040|emb|CBK96625.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
[Eubacterium siraeum 70/3]
Length = 480
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147
L + CP C +C + + L K+ + ++ S ++ V
Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
GG P LS +L +++ L + +R + P I + ++ LK G +
Sbjct: 217 YIGGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRTLKNGGVRR 274
Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
+ I P ++ + A+ R
Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292
>gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus
fer1]
Length = 315
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
++L +C +C FC M G+++ ++ + E +A + + ++ FTGG+PL+
Sbjct: 23 IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVA-VAASHGVNKIKFTGGEPLLR 78
Query: 158 SHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAI- 211
+L+ +R KH+ + + + P +L + LKEAG + +
Sbjct: 79 ED-----ILEIVRRTRKHITGNISLTTNG-VELP-----KLAKGLKEAGLDRVNISMHAI 127
Query: 212 -----HA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
H + F I +AG+ + VL+K IN+D
Sbjct: 128 DEYNFHFITDTKKNFLPIVKQGIQAARDAGLGPIKINFVLMKNINED 174
>gi|46447392|ref|YP_008757.1| 2-methylthioadenine synthetase [Candidatus Protochlamydia
amoebophila UWE25]
gi|81626503|sp|Q6MAB7|MIAB_PARUW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|46401033|emb|CAF24482.1| probable 2-methylthioadenine synthetase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 450
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 18/126 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
+ + ++ C +C +C V S+ E L + E+ G +
Sbjct: 159 KAYVSIIRGCDKFCTYC-----VVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQN 213
Query: 154 PLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+L+ +L L I ++ +RF + P+ I+ EL++ +++ K +
Sbjct: 214 VNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVD----ISKELMEAIRDL-KTL 268
Query: 208 YIAIHA 213
+H
Sbjct: 269 CEFVHF 274
>gi|325107255|ref|YP_004268323.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
DSM 5305]
gi|324967523|gb|ADY58301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
DSM 5305]
Length = 497
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 28/151 (18%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+ DP+ D P Y +++ C +C +C V S++
Sbjct: 160 QSYDPLRDPEMRPSP-----YQ--AFVRITFGCDKFCTYC-----VVPMTRGPEQSRNPS 207
Query: 133 AALAYIQ--EKSQIWEVIFTGG--DPLILSHK----RLQKVLKTLRYIKHVQILRFHSRV 184
L + + E+ G + L+ RL +L L ++ ++ + +
Sbjct: 208 EILKETKALADQGVQEITLLGQTVNSYRLTENGKEYRLADLLTMLHEVEGIKRI----KF 263
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
P+ + +L+Q +++ K H H
Sbjct: 264 VTNYPKDMTNDLLQAVRDYKK----VSHYLH 290
>gi|210622529|ref|ZP_03293222.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
gi|210154164|gb|EEA85170.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
Length = 358
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIF 149
+ + CP C FC ++++ G E L I + +++ F
Sbjct: 5 KKRIIPIFVPHQGCPNDCIFCNQKKITGVCTTVTPEIVRDIIEECLPTIDKDAEVEIAFF 64
Query: 150 TGGDPLILSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G +Q+ L + I V+ +R +R P I E+++ +K
Sbjct: 65 GGS--FTAIDMDIQRSLLAVAKEYKDRGI--VKDIRMSTR-----PDCITDEILEMVKSY 115
Query: 204 GKPVY 208
G +
Sbjct: 116 GTTII 120
>gi|158520204|ref|YP_001528074.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
gi|158509030|gb|ABW65997.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
Length = 330
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 20/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C R + +LS ++ + +I I ++ TGG+P +
Sbjct: 19 VSVTDRCNLNCLYCRRWDFSEYFPSSEILSYEEMLRLI-HIGAGLGITKIRITGGEPFVR 77
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI----- 211
+ + + + + + + L++AG + + I++
Sbjct: 78 KDA--CSFIDRVAAFDGISDISVTTNGL------LLGRYLDRLRQAGIRRLNISLDSLKR 129
Query: 212 ---HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ I +AG + V+++ +NDD
Sbjct: 130 EKYRLITGRDVFHTVWDNIMAALDAGFDPVKVNVVVMREVNDD 172
>gi|146303294|ref|YP_001190610.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145701544|gb|ABP94686.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
Length = 366
Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
D + + G+ RYP ++ + C + C C+ + LS+ A+
Sbjct: 10 DRKEEADRIRYAGLKDRYPSVLVFNVTRNCNLRCLHCYSGSGTQLFQDLPLST--WINAV 67
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRL 162
+ ++ +GG+PL L
Sbjct: 68 KQ-ASDMGVKHILLSGGEPLARRDLHL 93
>gi|229815885|ref|ZP_04446209.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
13280]
gi|229808580|gb|EEP44358.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
13280]
Length = 363
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C +C + + G +L++++ + I + I V TGG+PL+
Sbjct: 18 ISVTDKCNFRCVYCMPEKGVPARAHGELLTAEEIARFVR-IVAQEGITRVRLTGGEPLVS 76
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
R+ +++ +R I ++ + +
Sbjct: 77 --HRIVPLIEEIRSISEIEDISLTT 99
>gi|187251699|ref|YP_001876181.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191]
gi|186971859|gb|ACC98844.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum
Pei191]
Length = 409
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 13/160 (8%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+Q +P E +N + D++ + G R R +K+ C +C +C
Sbjct: 88 KQNLPSAEIINKHNIAKTLFDTDDDFWAVSGNEGR--SRAFIKIQDGCDNFCSYCII-PF 144
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSH-KRLQKVLKTLRYIK 173
++K + I E++ TG G+ L L +LK + I+
Sbjct: 145 ARNKKLSKPIPSTVNEIKELIS--KGFKEIVLTGINIGNYLCPQTGADLAVLLKEIFKIE 202
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+RF S + L+ KE G H
Sbjct: 203 GEYRIRFSSIELNT----VTDSLLAAAKEGGSKFCNYFHI 238
>gi|260461259|ref|ZP_05809507.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
opportunistum WSM2075]
gi|319785436|ref|YP_004144912.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|259032796|gb|EEW34059.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
opportunistum WSM2075]
gi|317171324|gb|ADV14862.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 493
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 43/248 (17%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C V C +C R+ G + + +A E Q
Sbjct: 61 AHHYFARMHVAVAPACNVQCNYCNRKYDCSNESRPGVVSEKLTPDQAVRKVIAVANEVPQ 120
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ + G GD ++ + + +R I +++ + P + EL
Sbjct: 121 LSVLGIAGPGDA-CYDWEKTKATFERVVREIPDIKLC-ISTNGLA-LPDHV-AELADMNV 176
Query: 202 EA------------GKPVYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQS 241
+ G +Y I +H EA ++ L+ GI+ S
Sbjct: 177 DHVTITINMVDPEIGAKIYPWIFYDHRRYVGIEAARILHERQMLSLEMLSARGILTKINS 236
Query: 242 VLLKGINDDPEILANLMRTFVEL---RIKPYYLHHPDLAAGTSHFRLTIEEG---QKIVA 295
V++ G+ND + N + P D A GT ++ LT + G + +
Sbjct: 237 VMIPGVNDQHLVEVNKQVKQRGAILHNVMPL---ISDPAHGT-YYGLTGQRGPNALE-MR 291
Query: 296 SLKEKISG 303
+L++++ G
Sbjct: 292 ALQDRLQG 299
>gi|322417559|ref|YP_004196782.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320123946|gb|ADW11506.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 357
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 42/221 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P I + C + C C E+ S+ ++++ + L I + S+ V+ +GG
Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
+PL+ L + +L R+ + + E+ + +K+A K V +
Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMATNGALVTDEVCEKMKKADIKMVSL 112
Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +H N P F AA G L S K + +A +
Sbjct: 113 SLDGSTADVHDNFRQCPGSFDGVMRAA-ELFKKHGQKFLVNSSFTK---RNQTDIAATFK 168
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ +Y+ + G++I+ L K
Sbjct: 169 VAKSIGATAWYMFM----------IVPTGRGEEIMNELISK 199
>gi|261417406|ref|YP_003251089.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373862|gb|ACX76607.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 330
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C+ C++ G K L++ + + I + + +IF+GG+P+
Sbjct: 3 VSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGGEPMT 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ L + LR F + + I +L LKEAG
Sbjct: 60 RPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 98
>gi|237795960|ref|YP_002863512.1| hypothetical protein CLJ_B2751 [Clostridium botulinum Ba4 str. 657]
gi|229262403|gb|ACQ53436.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 454
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L ++ L
Sbjct: 173 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 219
>gi|229099205|ref|ZP_04230137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
gi|228684186|gb|EEL38132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-29]
Length = 339
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLVKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|206889422|ref|YP_002249076.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741360|gb|ACI20417.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 449
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQE 140
P I ++ D + L + + C CRFC R V + E + I +
Sbjct: 251 DLPKGEIAYKIRDTLYLNVTNRCTNVCRFCVRFHTDYVKGHNLRLEKEPSAEDLIQTIGD 310
Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
E++F G G+P + RL + + ++I + +R ++
Sbjct: 311 PKNYKEIVFCGYGEPFL----RLDLIKEVAKWIKEQGGRVRVNT 350
>gi|168182598|ref|ZP_02617262.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|182674230|gb|EDT86191.1| conserved hypothetical protein [Clostridium botulinum Bf]
Length = 444
Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L + C C FCF ++ + T+ D ++ L+++Q + T
Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 128
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
+ + + +++ I + + H+ +P+ R+ +L+
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162
Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
F+ + +LA GI + Q VL G+N + E L ++ L
Sbjct: 163 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 209
>gi|313888304|ref|ZP_07821975.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312845707|gb|EFR33097.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 438
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
+K+ C C +C + G + + +D + + Y+ K ++ G
Sbjct: 147 VKISEGCNNNCSYCIIPSLRGKNRSRKI--EDIYSEVEYLVSKGAREIILIAQNTTDYGI 204
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
D + S L ++ + I+ ++ +R V + P ELI+ K K V Y+ +
Sbjct: 205 D--LYSKYSLANLINKISKIEDLKWIR----VLYLYPDHFTDELIEEFKNNDKLVNYVDM 258
Query: 212 HANHPYEFSEEAIAAISR 229
H S++ + ++R
Sbjct: 259 PLQH---ISDDVLKRMNR 273
>gi|299144058|ref|ZP_07037138.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518543|gb|EFI42282.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 438
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 16/114 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
+K+ C C +C ++ G + + +D + Y+ ++ G
Sbjct: 147 VKISEGCNNNCTYCIIPKLRGRNRSRKI--EDIYDEVKYLVNNGTREVILIAQNTTDYGI 204
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGK 205
D +L+ ++K L IK ++ +R + P ELI K K
Sbjct: 205 D--NYKEYKLKDLVKKLSEIKDLKWIR-----LMYLYPDNFTDELIDEFKNNDK 251
>gi|228952519|ref|ZP_04114596.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228807130|gb|EEM53672.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 337
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LK+AG K V I++
Sbjct: 77 PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 175
>gi|229079338|ref|ZP_04211882.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
gi|228704006|gb|EEL56448.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock4-2]
Length = 333
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 72
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L K++ L ++ ++ + + + Q + LK+AG K V I++
Sbjct: 73 PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 124
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I AG+ + V+ KG+ND
Sbjct: 125 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 171
>gi|139439619|ref|ZP_01773032.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
25986]
gi|133774960|gb|EBA38780.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
25986]
Length = 449
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 21/146 (14%)
Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS-KDTEAA----LAYIQEKSQIWEV 147
+K+ C +C FC R +++S +D A + I + + IW
Sbjct: 144 AYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIISEVRDLVAGGVREIVLIGQDTGIWGT 203
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAG 204
F D S + L ++L+ + + +R H+ RV + P+ + ELI +++
Sbjct: 204 DFADEDVADGSPRNLAQLLRAVA-----EAVRPHNVWVRVLYLQPEGMTDELIDTIRDTP 258
Query: 205 KPV-YIAIHANHPYEFSEEAIAAISR 229
+ + YI I H + A+ R
Sbjct: 259 EVLPYIDIPVQH---CDARILKAMRR 281
>gi|323527295|ref|YP_004229448.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
gi|323384297|gb|ADX56388.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
Length = 461
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGALTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265
>gi|74317041|ref|YP_314781.1| GTP cyclohydrolase subunit MoaA [Thiobacillus denitrificans ATCC
25259]
gi|74056536|gb|AAZ96976.1| Elongator protein 3/MiaB/NifB [Thiobacillus denitrificans ATCC
25259]
Length = 327
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 22/171 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
R+ D + L + C + C +C G ++ L + E L + V T
Sbjct: 12 RHIDYVRLSVTDRCDLRCSYCMPEGFKGFEEPADWLDFDEIERLLGAFAR-LGVRRVRLT 70
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------ 204
GG+PL+ + + + + + ++ L + LK AG
Sbjct: 71 GGEPLLRRD--ISGLARRIASLPGIEDLSLSTNA------TQLDRHAAALKAAGVTRLNV 122
Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
N + + + ++ AG + V ++G NDD
Sbjct: 123 SLDSLQQARVERIN-GRDVLAKVMTGLAAAQEAGFAPIKLNMVAMRGSNDD 172
>gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8]
gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8]
Length = 454
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
P EL+ E+ +D + + +RY DR L + L H C C
Sbjct: 44 PSSTELSKTEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103
Query: 111 FCFRREMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--RL 162
+C+++ + S + D E L Y +K + V F GG+PL+L L
Sbjct: 104 YCYQKVLHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVNL 161
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
LK L V+ F + + + +++ L++AG
Sbjct: 162 SSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199
>gi|282878779|ref|ZP_06287547.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
gi|282880979|ref|ZP_06289670.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
5C-B1]
gi|281299170|gb|EFA91571.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
gi|281305202|gb|EFA97271.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
5C-B1]
Length = 72
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|225574860|ref|ZP_03783470.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM
10507]
gi|225037934|gb|EEG48180.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM
10507]
Length = 447
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 18/125 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----- 150
R +K+ C +C +C G + S + + + + EV+ T
Sbjct: 151 RAYIKVQDGCNQFCTYCIIPYTRGRVRSR--SKDEVQKEVVRL-ANRGYHEVVLTGIHLS 207
Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L +++ + + + +R S ++P I E ++ L E K
Sbjct: 208 SYGVD-FKEQPDSLLDLIRAIHQVDGITRIRLSS----LEPGVITEEFVKGLAELWK--- 259
Query: 209 IAIHA 213
+ H
Sbjct: 260 VCPHF 264
>gi|224372902|ref|YP_002607274.1| hypothetical protein NAMH_0871 [Nautilia profundicola AmH]
gi|223589641|gb|ACM93377.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 408
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ +K+ C C +C + G L + + + I E + TG +
Sbjct: 128 KAFVKIQEGCDFECAYCIIPSVRG--HSRSLPENIILEQIKTLSQN-GISEFVLTGINMG 184
Query: 156 IL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ L ++++ + I+ V+ +R S ++P +++ LI+ + ++ I
Sbjct: 185 SYGKDTNTTLSELIEKISKIRGVKRIRLGS----LEPSQLDERLIELTQNGILEKHLHIA 240
Query: 213 ANH 215
H
Sbjct: 241 LQH 243
>gi|189463972|ref|ZP_03012757.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
17393]
gi|189438545|gb|EDV07530.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
17393]
Length = 439
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS R LK+ C YC +C + + E A
Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAE 193
Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E++ TG GD + + ++K L ++ ++ R S ++P + E+I+
Sbjct: 194 GGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249
Query: 200 LKEAGKPVYIAIHA 213
+ + H
Sbjct: 250 VSHSR---SFMPHF 260
>gi|182678041|ref|YP_001832187.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Beijerinckia
indica subsp. indica ATCC 9039]
gi|229890430|sp|B2IIK5|MIAB_BEII9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|182633924|gb|ACB94698.1| RNA modification enzyme, MiaB family [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 510
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG-- 152
+ + C +C FC V +S+ EA LA ++ S + EV G
Sbjct: 187 AFVTVQEGCDKFCSFC-----VVPYTRGAETSRPVEAILAEVETLIASGVREVTLIGQNV 241
Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
D + + L ++ + + + +R+ + P
Sbjct: 242 NAYHGFDAMTGAPASLASLMARVAAMPGLLRIRYTTSHPN 281
>gi|1361913|pir||S57481 molybdopterin biosynthesis protein moaA - Methanobacterium
thermoautotrophicum (strain Marburg) (fragment)
gi|871467|emb|CAA61207.1| moaA [Methanothermobacter thermautotrophicus]
Length = 87
Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR P L + + C V C +C R ++ S + +S +D E + + ++
Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63
Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
+GG+PLI + ++++ + I
Sbjct: 64 SGGEPLIRDD--IVEIVEKINSI 84
>gi|237808516|ref|YP_002892956.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
9187]
gi|259495873|sp|C4LFK3|MOAA_TOLAT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|237500777|gb|ACQ93370.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
9187]
Length = 336
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 64/179 (35%), Gaps = 22/179 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C + + L+ + + Y + + ++ TGG+P +
Sbjct: 27 LSVTEACNFRCTYCLPDGYRPDGRKSFLTVDEIRRVV-YGFAELGVKKIRLTGGEPSMRR 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L +++T+ ++ + + R+ Q + + ++I + P +
Sbjct: 86 D--LPAIIETVANTAGIEKV-----AMTTNGYRLKDRAQQWFDAGLRSLNVSIDSLDPRQ 138
Query: 219 ---FSEEAI-----AAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + AG + +VLLK +ND L + L+ +P
Sbjct: 139 FQLITGENKLVEILEGLEAAQKAGFRKIKVNTVLLKNLNDH-----ELSQFLFWLKKQP 192
>gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2]
gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
Length = 379
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
++C VYCRFC GS +G VLS+ E L IQE + E++ GG +
Sbjct: 62 TNICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGG---TNPN 115
Query: 160 KRLQKVLKTLRYIK-HVQILRFHSRVPI 186
LR IK H + HS P
Sbjct: 116 LPFSYYTDLLREIKQHFPDITMHSFSPA 143
>gi|332981525|ref|YP_004462966.1| 30S ribosomal protein S12P methylthiotransferase [Mahella
australiensis 50-1 BON]
gi|332699203|gb|AEE96144.1| SSU ribosomal protein S12P methylthiotransferase [Mahella
australiensis 50-1 BON]
Length = 440
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 80 DNNHSPLKGIVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
+ ++GI R P +K+ C C +C + G + + E +
Sbjct: 127 EGGDVSVEGIEKRILSTPPYMAYVKIAEGCDNGCSYCIIPFLRGPYRSRPM-----ENII 181
Query: 136 AYIQE--KSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+E + E+I D + RL ++L L I +++ +R V
Sbjct: 182 EECKELVDRGVKEIILIAQDTSVYGRDIYGKPRLAELLHELDNINNIEWIR----VLYCY 237
Query: 189 PQRINPELIQCLKEAGKPVYIAIHANH 215
P +N ELI+ + ++ H H
Sbjct: 238 PDYVNDELIEAIVQSR-------HVCH 257
>gi|299143546|ref|ZP_07036626.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518031|gb|EFI41770.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 288
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
++++ C C FC+ M + + D A L I++ Q V GD
Sbjct: 17 LIIQATIGCSHNDCTFCY---MYKDEPFIIRKIDDIIAELETIRDYFPQFERVFIADGDA 73
Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178
L+L L ++L+ + +V +
Sbjct: 74 LVLKTTDLLRLLEYINKNFPNVNRI 98
>gi|167753010|ref|ZP_02425137.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
gi|167659324|gb|EDS03454.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
Length = 432
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 35/198 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
LK+ C C +C ++ +V E A + E+I D
Sbjct: 136 AYLKISEGCNWKCGYCAI-PLIRGPHASVPMETLLEEARK--LAAGGVRELIVIAQDTTY 192
Query: 154 -PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
L L +RL ++L+ L I ++ +R H P P E+I+ + K Y+
Sbjct: 193 YGLDLYGKRRLAELLEALCRIDGIRWIRLHYAYPTAFP----DEVIEVMAREPKICKYLD 248
Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKG----INDDPEI 253
I H S++ +AA+ R L A L ++ LL G D E
Sbjct: 249 IPFQH---ISDDQLAAMHRRHTKAQAYELIDKLRQAIPDLALRTTLLVGYPGETEADFEE 305
Query: 254 LANLMR--TFVELRIKPY 269
L +R F L + PY
Sbjct: 306 LLEFVRTVRFERLGVFPY 323
>gi|86742221|ref|YP_482621.1| hypothetical protein Francci3_3540 [Frankia sp. CcI3]
gi|123737129|sp|Q2J750|RIMO_FRASC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|86569083|gb|ABD12892.1| SSU ribosomal protein S12P methylthiotransferase [Frankia sp. CcI3]
Length = 523
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+LK+ C C FC FR V VL+ + A + G
Sbjct: 184 AVLKISSGCDRRCAFCAIPSFRGSHVSRSPDDVLAEAEWLAGQGARELVLVSENSTSYGK 243
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
D L + L+K+L L + + +R + P + P L++ L G Y+
Sbjct: 244 D---LGDLRALEKLLPQLAAVSGIVRVR----TVYLQPAEMRPSLLEVLLTTPGLAPYLD 296
Query: 211 IHANHPYEFSEEAIAAISRLANAG 234
+ H S + + R +G
Sbjct: 297 LSFQHA---SPPVLRRMRRFGGSG 317
>gi|15804047|ref|NP_290083.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
gi|15833637|ref|NP_312410.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
Sakai]
gi|168746962|ref|ZP_02771984.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4113]
gi|168753312|ref|ZP_02778319.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4401]
gi|168759583|ref|ZP_02784590.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4501]
gi|168765907|ref|ZP_02790914.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4486]
gi|168772547|ref|ZP_02797554.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4196]
gi|168779643|ref|ZP_02804650.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4076]
gi|168785365|ref|ZP_02810372.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC869]
gi|168797330|ref|ZP_02822337.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC508]
gi|195935030|ref|ZP_03080412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
EC4024]
gi|208808940|ref|ZP_03251277.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4206]
gi|208814241|ref|ZP_03255570.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4045]
gi|208818610|ref|ZP_03258930.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4042]
gi|209395960|ref|YP_002272979.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4115]
gi|217326043|ref|ZP_03442127.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. TW14588]
gi|254795455|ref|YP_003080292.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
TW14359]
gi|261224817|ref|ZP_05939098.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli O157:H7 str. FRIK2000]
gi|261254287|ref|ZP_05946820.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli O157:H7 str. FRIK966]
gi|291284875|ref|YP_003501693.1| putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
str. CB9615]
gi|12518212|gb|AAG58644.1|AE005576_3 putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli O157:H7 str. EDL933]
gi|13363857|dbj|BAB37806.1| putative coproporphyrinogen oxidase [Escherichia coli O157:H7 str.
Sakai]
gi|187771599|gb|EDU35443.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4196]
gi|188018368|gb|EDU56490.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4113]
gi|189002627|gb|EDU71613.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4076]
gi|189359172|gb|EDU77591.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4401]
gi|189364804|gb|EDU83223.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4486]
gi|189369751|gb|EDU88167.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4501]
gi|189374481|gb|EDU92897.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC869]
gi|189379883|gb|EDU98299.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC508]
gi|208728741|gb|EDZ78342.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4206]
gi|208735518|gb|EDZ84205.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4045]
gi|208738733|gb|EDZ86415.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4042]
gi|209157360|gb|ACI34793.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. EC4115]
gi|217322264|gb|EEC30688.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
str. TW14588]
gi|254594855|gb|ACT74216.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli O157:H7 str. TW14359]
gi|290764748|gb|ADD58709.1| Putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
str. CB9615]
gi|320639818|gb|EFX09412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
G5101]
gi|320645318|gb|EFX14334.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
493-89]
gi|320650629|gb|EFX19095.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
2687]
gi|320655823|gb|EFX23746.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661605|gb|EFX29020.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666628|gb|EFX33611.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
LSU-61]
gi|326337500|gb|EGD61335.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
Length = 445
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 24/168 (14%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
LTP A ++ P D R +P + + + E+ + SP
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56
Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
R++ + C +C FC F + + ++ E A + + + + I V F
Sbjct: 57 KRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116
Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
GG P LS L +++ TLR + + RV D +RI+
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|116625479|ref|YP_827635.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
Ellin6076]
gi|116228641|gb|ABJ87350.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
Ellin6076]
Length = 331
Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQE 140
N +PL HR D + + + C + C +C V ++ +L ++ E + +
Sbjct: 2 NATPLVDSFHRVHDNLRISVTDRCNIRCFYCMPETGVTFVERREILDFEEIERFVR-VAA 60
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
I ++ TGG+PL+ L ++ L I +Q L
Sbjct: 61 GLGIRKLRVTGGEPLLRRD--LPVLIGRLACIPGIQDL 96
>gi|17988440|ref|NP_541073.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
gi|17984225|gb|AAL53337.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
melitensis bv. 1 str. 16M]
Length = 474
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD + L Y+ +I
Sbjct: 70 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 120
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212
>gi|332884205|gb|EGK04473.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
mossii DSM 22836]
Length = 431
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
LK+ C C +C M G + + ++ E + + + ++ F
Sbjct: 138 AYLKISEGCNRTCSYCSIPIMTGKHQSRPI--EEIEEEVRNLVAVGVKEFQVIAQDLSFY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D +L ++++ + I+ V+ +R H P P +L++ ++E
Sbjct: 196 GYD--NYKQAKLPELIERIAKIEGVKWIRLHYAYPANFPY----DLLRVMRE 241
>gi|169831502|ref|YP_001717484.1| radical SAM domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638346|gb|ACA59852.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 334
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 78/291 (26%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C+R G + LS+ + +A + I + +IF+GG+PL+
Sbjct: 3 VSWNTTNMCNLACAHCYRDA--GQKAEDELSTAEGKALIDEIAG-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+ ++ + LR S + I PE+ L +AG + + I++
Sbjct: 60 RPD--IYDLIAYAAS----RGLRPVLGSNGTL-----ITPEVAGRLVQAGARAIGISL-- 106
Query: 214 NHPYEFSE--------------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
A+ + AG+ + ++ ++ E L +L
Sbjct: 107 ---DSVDPGAHDGFRAEKGSWQAAVEGMKNCRAAGLPFQVHTTVMDWNEEEVEGLTDLAV 163
Query: 260 TFVELRIKPYYLHHPDLAAGTSH---FRLTIEEGQKI---------VASLKEK------I 301
G +H F + I L +
Sbjct: 164 EL----------------GGIAHHVFFLVPTGRALAIEHTTLRARQYEQLLRRLLKKQQT 207
Query: 302 SGL-----CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
+GL C P +I K + + + +YC+ + +
Sbjct: 208 AGLEVKPTCAPQFIRVADQLGAKTRFTRGCLAGI---AYCLVNPVGDLQAC 255
>gi|83589452|ref|YP_429461.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
gi|83572366|gb|ABC18918.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
Length = 450
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 13/122 (10%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
R LK+ C +C +C G + L + + Y++ G
Sbjct: 145 RAFLKIQEGCQEFCTYCIVPYARGPLRSRDPELIRAEVRRLVDAGYLEIVLTGVHTGAYG 204
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
D + L +LK L + ++ LR S +DP PEL L G I
Sbjct: 205 RD--LAGDIDLAGLLKNLVQVPGLRRLRISS----IDPLDFTPELKAVLTGEG---IICP 255
Query: 212 HA 213
H
Sbjct: 256 HF 257
>gi|326388685|ref|ZP_08210278.1| radical SAM domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206936|gb|EGD57760.1| radical SAM domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 424
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 39/175 (22%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
++++ C + C CF + G + E L + + + + V +GG+P
Sbjct: 54 AIIEVTEACDLACPVCF--ADAADRNGRHRPLAEIETMLDVLVESEGEPDLVQISGGEP- 110
Query: 156 ILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
L + +L + R I+HV I +R +P + L + I
Sbjct: 111 TLHPEFFA-ILDAVKRRPIRHVMINTNGVRLAQ----------DPTFVARLATYRPALEI 159
Query: 210 AIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLL----KGINDD 250
+ + S A+ L AGI + L+ G+NDD
Sbjct: 160 YLQFDSLRDEALMDLRGARLSRIRKEALEALEQAGIS----TTLVVAVKHGVNDD 210
>gi|296132944|ref|YP_003640191.1| MiaB-like tRNA modifying enzyme YliG [Thermincola sp. JR]
gi|296031522|gb|ADG82290.1| MiaB-like tRNA modifying enzyme YliG [Thermincola potens JR]
Length = 439
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 21/144 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG 151
P +K+ C C +C + G + G K+ + ++ + EVI
Sbjct: 144 PYTAYVKIAEGCDNRCSYC---AIPGIRGGYRSRPKESILQEVNDLVRR--GVKEVILIA 198
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L ++++ + + V +R P RI +LIQ ++ K
Sbjct: 199 QDTTRYGTDIYGRYALAELIQEIASLP-VHWIRI----LYAYPTRITDDLIQIIRGEPKV 253
Query: 207 V-YIAIHANHPYEFSEEAIAAISR 229
Y+ + H ++ I A++R
Sbjct: 254 CKYLDMPIQH---VDKDIIKAMNR 274
>gi|91784732|ref|YP_559938.1| molybdenum cofactor biosynthesis protein A [Burkholderia xenovorans
LB400]
gi|91688686|gb|ABE31886.1| GTP cyclohydrolase subunit MoaA [Burkholderia xenovorans LB400]
Length = 369
Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C R + +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ ++ L +
Sbjct: 100 PLL--RKNLEFLIDRLARL 116
>gi|315181901|gb|ADT88814.1| radical SAM domain protein [Vibrio furnissii NCTC 11218]
Length = 294
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGG 152
+ ILL++ C CRFC + K E + + GG
Sbjct: 15 NSILLEVTVGCTHNSCRFCT---FYYDTPYRIAPKKQVEHDLQEAQRVNPNAKRIYAVGG 71
Query: 153 DPLILSHKRLQKVLKTLRY 171
DP L +L + + +R
Sbjct: 72 DPFTLRTAKLVDLARMIRR 90
>gi|294101544|ref|YP_003553402.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
gi|293616524|gb|ADE56678.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
Length = 315
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R + + CP C +C +R + G + S + L+ + E ++ F G
Sbjct: 2 KRRAVFLPMRNCPHRCIYCDQRAITGEYQP--PSPHEVVTMLSTLLEPVEL--CYFGGS- 56
Query: 154 PLILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+RL ++ L + +RF + I+ + ++ LK+ P+ +
Sbjct: 57 -FTCQPERLQEEYLAAIVAAPSGSSVRFSTHPLC-----ISRDTVERLKKF--PISMV 106
>gi|169350747|ref|ZP_02867685.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
gi|169292610|gb|EDS74743.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
Length = 461
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + AL ++ E S EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFASQGKYKGERALMSFEVGKQALDFLVENSGTRHNLEVDFFGGEPL 163
Query: 156 ILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
++ + ++ ++ R I+ + RF + I+ E+I+ V +++
Sbjct: 164 -MNFQVVKDLVAYARSIEKEKNKNFRF---TLTTNGMLIDDEVIEFANRECSNVVLSL 217
>gi|152983231|ref|YP_001352703.1| hypothetical protein mma_1013 [Janthinobacterium sp. Marseille]
gi|151283308|gb|ABR91718.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 480
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 16/132 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGG 152
P ++ C C++C + + G + +D +AA I E S V F GG
Sbjct: 89 PSLHIIVPTLQCAHSCKYCQVSRSLNDE-GHTIKIEDLDAACESIFESSSPTLTVEFQGG 147
Query: 153 DPLILSHKRLQKVLKTLRYIKHV-----QILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
DPL+ R V + + YI + + +R+ V ++N E+ KE V
Sbjct: 148 DPLL----RFDLVRRAILYITSLNKSQNRRIRY---VVASTLHQLNVEMCLFFKE--HKV 198
Query: 208 YIAIHANHPYEF 219
Y++ + P
Sbjct: 199 YLSTSIDGPSRL 210
>gi|148508185|gb|ABQ75975.1| molybdopterin-based tungsten cofactor biosynthesis protein
[uncultured haloarchaeon]
Length = 572
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++++ C + C FCF GT S + E L I + + F+GG+P
Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230
Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177
+ L ++++ + +H+QI
Sbjct: 231 VRDD-LPEIVERAGQMGFEHIQI 252
>gi|119871554|ref|YP_929561.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
4184]
gi|119672962|gb|ABL87218.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
Length = 216
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPL 155
+ L CP+ CR+C + G + +++ + A AY Q+ V+ TGG+PL
Sbjct: 23 AVFIRLAGCPIRCRYCDTKYSWDPLGGVEIDAEEVVQRAAAY----GQLGHVVITGGEPL 78
Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
I + L ++ LR + V++
Sbjct: 79 I--WRNLHELACPLRRLGTVEV 98
>gi|110667956|ref|YP_657767.1| molybdopterin-based tungsten cofactor biosynthesis protein
[Haloquadratum walsbyi DSM 16790]
gi|109625703|emb|CAJ52135.1| molybdopterin-based tungsten cofactor biosynthesis protein
[Haloquadratum walsbyi DSM 16790]
Length = 572
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++++ C + C FCF GT S + E L I + + F+GG+P
Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230
Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177
+ L ++++ + +H+QI
Sbjct: 231 IRDD-LPEIVERAGQMGFEHIQI 252
>gi|322420567|ref|YP_004199790.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320126954|gb|ADW14514.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 294
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFT 150
++ ++ C CRFC G K + + LA I+ + + V
Sbjct: 19 LIFQITIGCSQNRCRFC------GMYKMKHFRIRSLDQVLAEIRSVPPRYRPCVRRVFLA 72
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GD LI + L ++L L +
Sbjct: 73 DGDALIYPQEGLGRILDELSDV 94
>gi|331004679|ref|ZP_08328140.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330409504|gb|EGG88946.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 449
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 65/162 (40%), Gaps = 19/162 (11%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYP------------DRILLKLLHVCPVYCRF 111
+E + +D + + +S + +Y +R+++ L + C + C +
Sbjct: 41 AKEDIKKQFDIDDNMYEKYYSNIFNSYSKYTVINVEKSAEKNLNRLVIHLTNDCNMRCGY 100
Query: 112 CFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
C+ + +++ + + + E I + F GG+PL ++++ ++ K +
Sbjct: 101 CYANGGAYYSQRSIMDKAVLDKLVDRFFGEFHIINNIQFFGGEPL-MNYELMEYACKIVS 159
Query: 171 YIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
I + + F + + I+ + I +K+ V I+
Sbjct: 160 SIAKKRNYNITFG---LVTNGTLIDCKFIDLVKKFNIQVTIS 198
>gi|288947682|ref|YP_003445065.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
gi|288898198|gb|ADC64033.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
Length = 581
Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 46/210 (21%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFR------REMVGSQKGTVLSSKDTEAALAYIQ 139
+K + HR + + C C FC RE +++ + D AL Y
Sbjct: 72 IKSLPHR--RSVRFSITEKCNYRCFFCHEEGLDMDRERQKTEEAALFKVFDQLKALDY-- 127
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRVPIVDPQRINPEL 196
++ FTGG+PL L +++ + L+ ++ I V+ + RV N
Sbjct: 128 -----DDLTFTGGEPL-LKWRQILRALEYMQAIGYRPDVKFVSNG-RVL-------NDTF 173
Query: 197 IQCLKEA--GKPVYIAIH---------ANHPYEFS--------EEAIAAISRLANAGIIL 237
I+ LK I++H HP ++RL A I
Sbjct: 174 IEGLKRYPGRVRFNISMHSLDSACYDRIVHPLSSHTPGTRDDLAHVQHNLARLNAAEIPF 233
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIK 267
VLL G+N E + + + +
Sbjct: 234 KLNFVLLNGLNTSAEQIDRIFAYALACGAR 263
>gi|240169459|ref|ZP_04748118.1| Fe-S oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length = 491
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
P+ +LLKL C + C +C+ + L + + ++ + F
Sbjct: 106 PNALLLKLTGGCNIACTYCYDYDKTRF-----RARLDDDRIHELVDVLIARNSHLSIAFH 160
Query: 151 GGDPLILSHKRLQKVL----KTLRYIKHVQILRFHSRVPIVDPQRIN 193
GG+PL L ++++ + + + H+ + P ++
Sbjct: 161 GGEPL-LRWDQIKRTVSYARERAAAVGHLVSFSIQTNGLFFTPAVVD 206
>gi|16950513|dbj|BAB72009.1| quinohemoprotein amine dehydrogenase unknown subunit. [Pseudomonas
putida]
Length = 476
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 26/187 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151
+ ++L + C + C +C++ ++ G +S+ EA++ + + Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFG 161
Query: 152 GDPLILSH--KRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G+PL + + + K V+ + + + E++ L +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLNAHRFGL 215
Query: 208 YIAI----HANHPYEFS-------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPEIL 254
++I + + + + L + ++ L +GI D I
Sbjct: 216 SVSIDGPKTVHDRNRITVGGQGTYDVVRRKVDMLLSRYHSRPVGARVTLTRGITDVETIW 275
Query: 255 ANLMRTF 261
+L
Sbjct: 276 NHLFNEL 282
>gi|218781894|ref|YP_002433212.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218763278|gb|ACL05744.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 340
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C++C+R G V+ + + A+ + + + TGG+PL L+
Sbjct: 11 LSVTGKCNLACKYCYR----GEPNNDVMKPEWAKTAIDLAAASGEGFHIQITGGEPL-LA 65
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA----IHA- 213
+ K+L+ ++ K VQ S + I+ + + L + ++ IH
Sbjct: 66 WDMILKLLEYIQKSK-VQ----ASVGLQTNGTLIDDNIARALLAHKVQLGVSLDGPIHIH 120
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
N +E+ + ++ L + + + +V+ D+ L
Sbjct: 121 NKLRGKAEQTLNNLALLTDRNVPFRTTTVVTA---DNAASLGK 160
>gi|89095299|ref|ZP_01168218.1| radical SAM domain protein [Oceanospirillum sp. MED92]
gi|89080418|gb|EAR59671.1| radical SAM domain protein [Oceanospirillum sp. MED92]
Length = 299
Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152
+ ++L++ + C C FC + +K ++ EA + + + V G
Sbjct: 21 NSLILQVTNGCSWNKCTFC-EMYTLPQKKFRPKPQQEIEAEIKACAAQLGAVRRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DPQRINP---ELIQCLKEAGKPVY 208
D + LS KRL+++L ++ H+ + +RV P+ +N E + L+E G +
Sbjct: 80 DAMALSFKRLKEILLAIKT--HLPTV---TRVSSYCLPRNLNNKSVEELAELRELGLQLM 134
Query: 209 IA 210
Sbjct: 135 YV 136
>gi|299067006|emb|CBJ38201.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
CMR15]
Length = 373
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ Q +LS ++ E + E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|260564161|ref|ZP_05834646.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
melitensis bv. 1 str. 16M]
gi|260151804|gb|EEW86897.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
melitensis bv. 1 str. 16M]
Length = 450
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD + L Y+ +I
Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188
>gi|257062972|ref|YP_003142644.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256790625|gb|ACV21295.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 293
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 99 LKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGGDPL 155
L++ C C+FC + V ++ EA L + + G D
Sbjct: 19 LQITSGCSHNRCKFCT---FYKDARFAVSPWEEIEADLDELAASPWRYYDRIWLQGADSF 75
Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178
+L + RL +V +T+ + V+ +
Sbjct: 76 VLPYDRLMRVAETIYEKLPWVKSI 99
>gi|182417560|ref|ZP_02626322.2| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237667762|ref|ZP_04527746.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182378573|gb|EDT76101.1| conserved hypothetical protein [Clostridium butyricum 5521]
gi|237656110|gb|EEP53666.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 464
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151
+++ C +C +C R + + +L + E A I+E I + G
Sbjct: 167 AYIRIAEGCNNFCTYCIIPKIRGKFRSRKMENILKEAE-ELASQGIKELILIAQDTTMYG 225
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
D I K L ++L L I+ ++ +R V P+ I ELI + + K V
Sbjct: 226 SD--IYGKKNLHELLNELSKIEGIEWIR----VLYCYPEEIYDELIDEMAQNNKVV 275
>gi|17545758|ref|NP_519160.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
GMI1000]
gi|17428052|emb|CAD14741.1| probable molybdenum cofactor biosynthesis protein a [Ralstonia
solanacearum GMI1000]
Length = 373
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ Q +LS ++ E + E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|86150486|ref|ZP_01068711.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839081|gb|EAQ56345.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 256
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +K+ C C +C R + + +L + A Y E++
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184
Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240
Query: 207 VYIAIHANH 215
++ I H
Sbjct: 241 RHLHIALQH 249
>gi|126172736|ref|YP_001048885.1| radical SAM domain-containing protein [Shewanella baltica OS155]
gi|125995941|gb|ABN60016.1| Radical SAM domain protein [Shewanella baltica OS155]
Length = 295
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C CRFC K + LA + + + V GD +
Sbjct: 19 LILQVTNGCSWNQCRFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78
Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
L RL+ + K + R++ V +R+ P+ + PE + L+E G +
Sbjct: 79 SLPFARLEAICKLINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132
Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
+ E E ++AA+ ++ AG +++L+
Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174
>gi|256811140|ref|YP_003128509.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
gi|256794340|gb|ACV25009.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
Length = 280
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y ++LK+ + C + C +C+ V ++ + K + A+ Y+ ++ FTG
Sbjct: 2 KY---LILKITNRCNLNCIYCY----VNNKDNKDMDFKTAKNAIDYLLSLDNKIKIQFTG 54
Query: 152 GDPLILSHKRLQKVLK 167
G+PL L+ K ++KV+
Sbjct: 55 GEPL-LNFKLIEKVVD 69
>gi|219854162|ref|YP_002471284.1| hypothetical protein CKR_0819 [Clostridium kluyveri NBRC 12016]
gi|219567886|dbj|BAH05870.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 463
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ + + ++ + + E+I +G
Sbjct: 166 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 220
Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L K+L+ + IK + +R S +DP+ ++I + K
Sbjct: 221 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 275
Query: 207 VYIAIHA 213
+ H
Sbjct: 276 --LCPHF 280
>gi|153953540|ref|YP_001394305.1| oxidoreductase [Clostridium kluyveri DSM 555]
gi|146346421|gb|EDK32957.1| Predicted oxidoreductase [Clostridium kluyveri DSM 555]
Length = 434
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + SK+ + + ++ + + E+I +G
Sbjct: 137 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 191
Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L K+L+ + IK + +R S +DP+ ++I + K
Sbjct: 192 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 246
Query: 207 VYIAIHA 213
+ H
Sbjct: 247 --LCPHF 251
>gi|83952182|ref|ZP_00960914.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
gi|83837188|gb|EAP76485.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
Length = 327
Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 7/170 (4%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
DP P + +P+ + +C + C C+ + + ++ + A L
Sbjct: 26 DPAVTAKGEPRASVPLSHPETLWFNTGTLCNITCVNCYIESSPNNDRLVYITEPEMRAYL 85
Query: 136 AYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ + E+ FTGG+P ++ + L V IL R P++ +
Sbjct: 86 DELTARNWPVREIAFTGGEPF-MNPEMCAMARTALARGYEVLILTNAMR-PMMRKS-VQA 142
Query: 195 ELIQCLKEAGKPVYIAIHANHP-YEFSEEAI--AAISRLANAGIILLSQS 241
EL + + G + + I +H E ++ A +R + I L Q
Sbjct: 143 ELAALIADYGPRLTLRISLDHWSEEMHDQMRGKQAFARTLDGMIWLRDQG 192
>gi|298383745|ref|ZP_06993306.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
gi|298263349|gb|EFI06212.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
Length = 443
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + + +
Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|239625860|ref|ZP_04668891.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520090|gb|EEQ59956.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 353
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C + + +LS ++ E A+A I + TGG+PL+
Sbjct: 14 ISITDRCNLRCRYCMPNGVESLARSEILSLEEIE-AIAICAASLGISRIKVTGGEPLVRR 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
+++K L+ I ++ + +
Sbjct: 73 DC--CQLVKLLKSIPGIEKVTITT 94
>gi|193213822|ref|YP_001995021.1| radical SAM domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193087299|gb|ACF12574.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 403
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L+ +C +YC C+R ++K + S + L Q+ + GGDPL+
Sbjct: 26 LEPTALCNLYCDGCYRM----NEKDSHKSLDVVKQELDTFQKLRNSDCISIAGGDPLLHP 81
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG 204
++L + +K R + + + + + EL++ LK+AG
Sbjct: 82 -----QILDIVADVK-----RRGLKPIVNTNGKALTMELLKDLKKAG 118
>gi|29347563|ref|NP_811066.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253572024|ref|ZP_04849428.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29339463|gb|AAO77260.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251838204|gb|EES66291.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 443
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + + +
Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|326554660|gb|ADZ89299.1| coproporphyrinogen III oxidase [Brucella melitensis M5-90]
Length = 458
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD + L Y+ +I
Sbjct: 54 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 104
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196
>gi|283853643|ref|ZP_06370877.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
gi|283570976|gb|EFC19002.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
Length = 432
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 19/179 (10%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL+ILP + +G P + P LK+ C CR+C + G
Sbjct: 105 LPTELDILPGRLAEALGAEAADPTGRLASTPPSYAYLKIAEGCDHACRYCTIPSIRGGLV 164
Query: 123 GTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
L ++ L + S++ +V G D L L LQ +L+ L + ++
Sbjct: 165 SRPLPGLVEEARGLLD--RGVSELVVVAQDVTAYGRD-LGLKDG-LQALLEKLLPLSGLK 220
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233
LR + P + L+ L AG+P Y I H E +AA++R A
Sbjct: 221 WLRL----LYLYPSGVTDGLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272
>gi|225686939|ref|YP_002734911.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
gi|256042927|ref|ZP_05445873.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256261920|ref|ZP_05464452.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
melitensis bv. 2 str. 63/9]
gi|265989360|ref|ZP_06101917.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
Rev.1]
gi|225643044|gb|ACO02957.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
melitensis ATCC 23457]
gi|263000029|gb|EEZ12719.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091400|gb|EEZ15936.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
melitensis bv. 2 str. 63/9]
gi|326411370|gb|ADZ68434.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
Length = 450
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD + L Y+ +I
Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188
>gi|21227624|ref|NP_633546.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
gi|20906012|gb|AAM31218.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
Length = 374
Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ CP C++C + G + + A Y + G D +
Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSIDSILKNAQHYNDLRFIASNAFAYGSDGI 202
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+++K+L L + +I F + V P+ + E ++ +++
Sbjct: 203 HPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 249
>gi|291166609|gb|EFE28655.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Filifactor alocis ATCC
35896]
Length = 483
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 21/151 (13%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
++L + D + D + ++G+ ++ + + +++ C +C +C +
Sbjct: 153 QQLTSNAGQLID-VWDIDGQIIEGLPTTRKFDVKSFVNIMYGCNNFCTYC-----IVPYT 206
Query: 123 GTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKH 174
S++ + L I+ I E+ G + + K L++ +L+ + I
Sbjct: 207 RGRERSREPKDILDEIRFLANEGIKEITLLGQN-VNSYGKTLEQNYTFADLLRDVNDIDG 265
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ +RF S P+ ++ ELI + E K
Sbjct: 266 IERIRFMSSH----PKDLSDELIDAMAELPK 292
>gi|225570522|ref|ZP_03779547.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
15053]
gi|225160719|gb|EEG73338.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
15053]
Length = 441
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 25/166 (15%)
Query: 64 KEELNILPE-ERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
KE L P E ED P+ ++ G + Y LK+ C +C +C ++
Sbjct: 113 KEALEGHPCMEMEDIDVLPLVESKRLVTTGGHYAY-----LKIAEGCDKHCTYCIIPKIR 167
Query: 119 GSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
G+ + + K+ EA Q ++ E G D I K L ++L+ L I
Sbjct: 168 GNFRSVPMERLVKEAEALAE--QGVKELILVAQETTLYGKD--IYGEKSLHRLLRKLCGI 223
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217
+ ++ +R P+ I ELIQ +KE K Y+ + H
Sbjct: 224 EGLRWIRI----LYCYPEEIYDELIQVIKEEKKICHYLDLPIQHAN 265
>gi|155241764|gb|ABT18046.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
Length = 331
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C ++C C+R G++ LS+ + + L I + + +IF+GG+PL+
Sbjct: 7 TTNQCNMFCDHCYRDA--GAKAEQELSTVEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
+ L + LR F + + I E+ + LK+AG
Sbjct: 63 -----IVELVAYATSKGLRSVFGTNGTL-----ITREMARDLKKAG 98
>gi|53715679|ref|YP_101671.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|52218544|dbj|BAD51137.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
Length = 479
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVL---SSKDTEAALAYIQE---------KSQI 144
+L+++ C + C++C E + + + + + Y+ +
Sbjct: 84 LLIEVTDKCNLKCKYCGYGEFYSNYDRRETCNQTFDNVKVLIDYLANLWRSDYNVSHNNT 143
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
V F GG+PL L+ K +Q+ + + + H+ LRF
Sbjct: 144 VTVGFYGGEPL-LNMKLIQETIAYIESL-HIDNLRF 177
>gi|317121910|ref|YP_004101913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
marianensis DSM 12885]
gi|315591890|gb|ADU51186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
marianensis DSM 12885]
Length = 517
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC----FR 114
+PQ E E + ++ + R + + +++ C YC FC R
Sbjct: 165 LPQLIERVRREEGMVVDVWQAAEGVVEHLPSRRAGGVKAWVNIIYGCDKYCTFCIVPTTR 224
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ V++ + AA Y + V G D +L L +
Sbjct: 225 GRERSRRPEDVIAEVEYLAAEGYKEVTLLGQNVNSYGKDLGTGFD--FADLLARLDRVPG 282
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ +R+ + P+ +LI+ + E+ K
Sbjct: 283 IRWIRYTTSH----PRDFTDKLIRTIAESDK 309
>gi|296157337|ref|ZP_06840173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
gi|295892673|gb|EFG72455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
Length = 457
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 21/128 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202
Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L + +++ + I ++ +R+ + P+ LI +
Sbjct: 203 VNAYRGGLTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258
Query: 205 KPVYIAIH 212
K + +H
Sbjct: 259 K-LVSHLH 265
>gi|256112100|ref|ZP_05453036.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
Ether]
gi|265993540|ref|ZP_06106097.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
Ether]
gi|262764410|gb|EEZ10442.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
Ether]
Length = 450
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD + L Y+ +I
Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188
>gi|48478258|ref|YP_023964.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus
DSM 9790]
gi|48430906|gb|AAT43771.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus
DSM 9790]
Length = 611
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--WEVIFTGGDP 154
+ + + C + C +CF + + S L ++ + + V TGG+P
Sbjct: 152 IVVTNRCDLSCWYCF---FYAKENEPIYEPSLDQIRMMLRRMRNEKPVGANAVQITGGEP 208
Query: 155 LILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L+ + + HVQ+ +R + +P+ ++ ++EAG V I
Sbjct: 209 -TMRDDILEVIKIAREEGYDHVQLNTNSIR----------EAYDPDFVRKVREAGSNV-I 256
Query: 210 AIHA------NHPYEFSEEAIAAISRLANA--GIILLSQSVLLKGIND 249
++P F E AA+ A G++L+ ++ GIND
Sbjct: 257 YTSFDGPTPRSNPKNF-WEIPAALENYRKAPLGVVLV--PTVIGGIND 301
>gi|189500918|ref|YP_001960388.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1]
gi|189496359|gb|ACE04907.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1]
Length = 451
Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 45/233 (19%), Positives = 87/233 (37%), Gaps = 39/233 (16%)
Query: 22 KEQIDEIKEISNHYS---IALTPVIANL-------INPHNPNDPIARQFIPQKEELNILP 71
++ +I+++ Y IA+T A + I+ + + ++IP+K ++
Sbjct: 61 QKSRQQIRKMIKKYPLSRIAVTGCYAQMYPDSVETIDGVHVILGVREKYIPEKYIKDVQE 120
Query: 72 E-EREDPIGDN--NHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQK--- 122
RE + + P ++ + R LK+ C C +C G +
Sbjct: 121 AVYREVASPETIKDAEPAHSLIEKREKGRTRAFLKIQDGCDYACAYCTIPLARGKSRSVP 180
Query: 123 -GTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQIL 178
TVL+ A Y E++ TG D + + +L+ L + V +
Sbjct: 181 LETVLAGAVRLAEAGY-------REIVLTGVNIADYRSGRNTFVDLLLE-LESVD-VSRI 231
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
R S ++P ++ LI + + K I H + P + +AI A R
Sbjct: 232 RISS----IEPDILSDRLIDTVASSSK---IMPHFHLPLQSGSDAILAAMRRR 277
>gi|255528303|ref|ZP_05395115.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium carboxidivorans P7]
gi|255508005|gb|EET84433.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium carboxidivorans P7]
Length = 171
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+L C C+ CF G L +D + L I++ + V F+GGDP
Sbjct: 25 RVLF--SQGCKHNCKGCF-NPSTHCYDGGEL--RDMDELLDDIRKNPMLKGVTFSGGDPF 79
>gi|120611327|ref|YP_971005.1| molybdenum cofactor biosynthesis protein A [Acidovorax citrulli
AAC00-1]
gi|120589791|gb|ABM33231.1| GTP cyclohydrolase subunit MoaA [Acidovorax citrulli AAC00-1]
Length = 386
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G G +LS ++ + ++ TGG+
Sbjct: 51 ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEITRLARVFLAH-GVRKIRLTGGE 109
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ + L+ +++ L +
Sbjct: 110 PLL--RRHLENLVEQLAGL 126
>gi|317010566|gb|ADU84313.1| hypothetical protein HPSA_01445 [Helicobacter pylori SouthAfrica7]
Length = 418
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + K E + + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCNKGVQEVVLTGTN 189
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|225568730|ref|ZP_03777755.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
15053]
gi|225162229|gb|EEG74848.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
15053]
Length = 427
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R +K+ C +C +C + + S+ E+ LA ++ ++ EV+ TG
Sbjct: 141 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRKRESVLAEVRRLAEGGYKEVVLTG 195
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ + L ++++ + ++ +R S ++P+ + E Q L K
Sbjct: 196 IHLSSYGVDTGDDLLRLIEAVHGTDGIERIRLGS----LEPRIVTEEFAQALAGLPK--- 248
Query: 209 IAIHA 213
I H
Sbjct: 249 ICPHF 253
>gi|254479101|ref|ZP_05092453.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
pacificum DSM 12653]
gi|214034950|gb|EEB75672.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
pacificum DSM 12653]
Length = 436
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%)
Query: 59 QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
Q + EE+ +L D + D + I+ P LK+ C C FC
Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164
++ G K + E A + + E+I D L+L +
Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
+L+ L I+ ++ +R P + ELI+ +K K V YI I H E
Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNEKIVKYIDIPLQHSSE 266
>gi|217076998|ref|YP_002334714.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
gi|217036851|gb|ACJ75373.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
Length = 429
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C R G++ + L + E++ TG
Sbjct: 136 RTRAFIKVQDGCTNTCSYCAIRFARGNKIRSKPVDLVVSEVLRLV--NKDYKEIVITG-- 191
Query: 154 PLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L L L ++L++L IK +R S ++P+ ++ ELI + K +
Sbjct: 192 -LNLGKFGKDIDSSLHELLRSLVKIKGDFRIRLSS----INPEDLDEELISLIGAEEK-I 245
Query: 208 YIAIHA 213
+H
Sbjct: 246 CNHLHI 251
>gi|167042814|gb|ABZ07532.1| putative TatD related DNase [uncultured marine microorganism
HF4000_ANIW137I15]
Length = 482
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEK 141
+P+ IV++ + L L + C C +C R + +G + D + ++
Sbjct: 281 NPVPQIVYKMHGALHLNLTYTCTNNCFYCPRFSSDYLGGHNLKLDRDPDPDEIWEALKAF 340
Query: 142 SQIWE-VIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILR------FHSRVPIVDPQRI 192
I + V F+G G+PL L L+++ ++ V++L H R V P+
Sbjct: 341 GDIRQLVTFSGYGEPL-LRLDVLKEIAGRIKEAGGTVRVLTNGQGNLIHGR--NVLPE-- 395
Query: 193 NPELIQCLK 201
L+ L+
Sbjct: 396 LQGLVDQLR 404
>gi|152992903|ref|YP_001358624.1| type II restriction-modification enzyme, R and M protein
[Sulfurovum sp. NBC37-1]
gi|151424764|dbj|BAF72267.1| type II restriction-modification enzyme, R and M protein
[Sulfurovum sp. NBC37-1]
Length = 1232
Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 15/78 (19%)
Query: 271 LHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
L D A G+ HF ++ + +I + L+ + D G K
Sbjct: 521 LSICDPAVGSGHFLVSSLNTILEIKSQLR----------ILFDAEGKRIK----DDYELS 566
Query: 330 VGNGSYCITDHHNIVHDY 347
V N + D + +Y
Sbjct: 567 VENDELIVRDDEGEIFEY 584
>gi|320352216|ref|YP_004193555.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320120718|gb|ADW16264.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 335
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 66/185 (35%), Gaps = 24/185 (12%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWE---VIFTGGD 153
+ CP C FC +R + G V S+ E ++ + + E V GG
Sbjct: 7 IFIPHEGCPHRCIFCDQRRISGQVAPPVDSNGVAETIRVWLARSRPDRRERVQVALYGGS 66
Query: 154 PLILSHKRLQKVL---KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209
L +R +++L + R VQ +R +R P I+ + L+E G + +
Sbjct: 67 FTGLPVERQRELLAAVQPFRRHGLVQEIRLSTR-----PDLIDSGRLDLLEEYGVSIVEL 121
Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRT 260
+ A +L G L Q +L L G D IL + T
Sbjct: 122 GAQSCDDRVLRLAGRGHGGAAVEDAARQLRERGFGLGIQLMLGLPG--DSFRILRQTVAT 179
Query: 261 FVELR 265
V LR
Sbjct: 180 VVSLR 184
>gi|295697188|ref|YP_003590426.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
2912]
gi|295412790|gb|ADG07282.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
2912]
Length = 344
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G VH Y + + + C + C +C V + L + + + + + + +
Sbjct: 21 GRVHDY---LRISVTDRCNLRCLYCMPAHGVQFMESRRLMTYEEIVTVVRVAARLGVKRL 77
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
TGG+PL+ + ++++ L I ++
Sbjct: 78 RITGGEPLVRPD--IDRLIEALGAIPGIE 104
>gi|291536277|emb|CBL09389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
M50/1]
Length = 496
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +Y + + ++ C +C +C + G ++ K+ + + + E++
Sbjct: 199 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIIREIERLAAD-GVVEIM 255
Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G + P+ ++L+ + + ++ +RF + P+ ++ +LI+
Sbjct: 256 LLGQNVNSYGKNLEQPMTF-----AQLLQEIEKVDGIERIRFMTSH----PKDLSDDLIE 306
Query: 199 CLKEAGKPVYIAIH 212
+K + K + +H
Sbjct: 307 VMKNS-KKICKHLH 319
>gi|169830380|ref|YP_001716362.1| radical SAM domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637224|gb|ACA58730.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 370
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 61 IPQKEE---LNILPEEREDPIGDNNHSPLKG----IVHRYPDRILLKLLHVCPVYCRFCF 113
+P +EE L + D + + G VH R +++ + C C +C
Sbjct: 39 VPTREEIVALLTAGDADTDALYRAADAVRAGHVGDTVHL---RAIIEFSNHCVQNCLYCG 95
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
R +S + AA A +++ V+ +G DP L +++ L+
Sbjct: 96 LRRNNRRLFRYRMSPDEIFAAAAVARDQGYRTVVLQSGEDPGY-PTSELARLVHRLKD 152
>gi|160933769|ref|ZP_02081157.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
gi|156867646|gb|EDO61018.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
Length = 429
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 23/150 (15%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118
++ E+ I P +D + R R LK+ C +C +C R +
Sbjct: 115 RRREVKIRPYTGKDSF---ESLQIHSFQER--TRAFLKIQDGCNRFCSYCIIPYSRGRVR 169
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSHKRLQKV--LKTLRYIKHV 175
+ T AA Y E++ TG + L ++ + + V
Sbjct: 170 SKPLEELTREARTLAASGY-------REIVLTGINLSCYGQDSGLGLWDAVEAVCGLPEV 222
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ +R S ++P+++ +++ L K
Sbjct: 223 ERVRLGS----LEPEQMELPVLERLARQEK 248
>gi|222480620|ref|YP_002566857.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
49239]
gi|222453522|gb|ACM57787.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
49239]
Length = 434
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + + + ++ E A A + + E+ TG D +
Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPTVEENVEKARALV--HAGAKEIRVTGQDTGVY 182
Query: 158 S----HKRLQKVLKTLRYIKHVQILRFH 181
++L ++L + I +R
Sbjct: 183 GWDNGDRKLPELLDRICDIDGDFRVRLG 210
>gi|118444753|ref|YP_878562.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
gi|118135209|gb|ABK62253.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
Length = 433
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 25/130 (19%)
Query: 94 PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R LK+ C +C +C F R V S+ ++ + + E+I +
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLIPFARGAVCSKNPEII----IDEVKK-LAAH-GFKEIILS 194
Query: 151 GGDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEA 203
G D L +LK + I + +R S I PE +KE
Sbjct: 195 GIDISSYGVDLEGDWNLLTILKKIDEIDGITRVRIGS---------IGPEFFNEDRIKEI 245
Query: 204 GKPVYIAIHA 213
GK + H
Sbjct: 246 GKLKKLCPHF 255
>gi|167040005|ref|YP_001662990.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
gi|300914096|ref|ZP_07131412.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307724670|ref|YP_003904421.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854245|gb|ABY92654.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
gi|300889031|gb|EFK84177.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307581731|gb|ADN55130.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
Length = 460
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ + C + C++C+ +Q +++ + E +I+ ++ ++F GG+PL L
Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144
Query: 158 SHKRLQKVLKTLRYIKH 174
K + K+ + + H
Sbjct: 145 GFKAIGKICEKMGKETH 161
>gi|167037358|ref|YP_001664936.1| radical SAM domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115773|ref|YP_004185932.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856192|gb|ABY94600.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319928864|gb|ADV79549.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 460
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ + C + C++C+ +Q +++ + E +I+ ++ ++F GG+PL L
Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144
Query: 158 SHKRLQKVLKTLRYIKH 174
K + K+ + + H
Sbjct: 145 GFKAIGKICEKMGKETH 161
>gi|189345895|ref|YP_001942424.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
gi|189340042|gb|ACD89445.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
Length = 458
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 16/140 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G + L S++ A + S E++ TG
Sbjct: 155 RTRAFLKIQDGCDYACAYCTIPHARG--RSRSLPSEELVARARSL-AFSGYREIVLTGVN 211
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD L +L+ L + V +R S ++P ++ ELI+ + + K I
Sbjct: 212 IGD-YRGHASGLVGLLRMLEDV-SVDRIRISS----LEPDILDDELIETVAASKK---IT 262
Query: 211 IHANHPYEFSEEAI-AAISR 229
H + P + ++I A+ R
Sbjct: 263 PHFHVPLQSGSDSILKAMRR 282
>gi|218128607|ref|ZP_03457411.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
gi|317475589|ref|ZP_07934851.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|217989209|gb|EEC55523.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
gi|316908293|gb|EFV29985.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 443
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSVASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + + +
Sbjct: 205 IGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEFVSRSKR---FM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277
>gi|297583836|ref|YP_003699616.1| radical SAM domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142293|gb|ADH99050.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
Length = 378
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E ++ LS + +A + ++ + ++FTGGD
Sbjct: 11 PFIVIWELTRACELKCLHC-RAEAQYTRDPRELSFDEGKALIDTFKDMNNPM-LVFTGGD 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
PL+ + + + +R S P P + E ++ KE G +
Sbjct: 69 PLMRED------VFDIASYAISRGIRV-SMTPSATPN-VTLEAMKKAKEVGLSRWAFSLD 120
Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H Y+ + + AIS L + + +V+ + D + +A +
Sbjct: 121 GPNAAIHDHFRGTEGSYQLTTD---AISYLHELELPVQINTVISRYNIDCLDEMAAKVEE 177
Query: 261 F 261
Sbjct: 178 L 178
>gi|14591248|ref|NP_143325.1| hypothetical protein PH1458 [Pyrococcus horikoshii OT3]
gi|3257882|dbj|BAA30565.1| 587aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 587
Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKS-QI 144
HR ++ + L + C + C +CF +++G + E ++ E
Sbjct: 134 HRSHTSLINIVLTNRCNLSCWYCF----FYAREGEPIYEPTLEQIRMMLRNAKKEHPIGA 189
Query: 145 WEVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
V FTGG+P L ++ + + H+Q+ ++ +PEL++ L+EA
Sbjct: 190 NAVQFTGGEP-TLRDDLIEIIKIAKEEGYDHIQLNTDGIKL------AFDPELVKKLREA 242
Query: 204 GKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
G + NH E + + GI+L+ L++ IND
Sbjct: 243 GVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNINDH 294
>gi|329963574|ref|ZP_08301053.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
fluxus YIT 12057]
gi|328528563|gb|EGF55534.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
fluxus YIT 12057]
Length = 432
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
LK+ C C +C + G K ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVAGGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPEDLFRVMRERPN 244
>gi|319759064|gb|ADV71006.1| metallo cofactor biosynthesis protein [Streptococcus suis JS14]
Length = 413
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +I+++L + C + C CF+ G L ++ L + K +++E+ TGG
Sbjct: 100 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 155
Query: 153 DPLILS 158
+P+
Sbjct: 156 EPMAHP 161
>gi|291288343|ref|YP_003505159.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio
acetiphilus DSM 12809]
gi|290885503|gb|ADD69203.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio
acetiphilus DSM 12809]
Length = 332
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C + Q +LS ++ A+ + +V TGG+PL+
Sbjct: 21 VSVTDRCNFRCKYCMPTTDFKCLQHENILSYEELLFAVDVFCS-LGVKKVRVTGGEPLV- 78
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
K + L+ L ++ ++ + + + E + +K AG + + +
Sbjct: 79 -RKGIGSFLEGLGKMEKLEEVTLTTNG------ALLKEFTEQIKSAGIQ-RVNVSLDSLQ 130
Query: 218 E-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250
E + +I + AGI + + V++KG NDD
Sbjct: 131 EERYKDITGGFKLEKIIDSIKHVQRAGIGPVKTNMVVIKGYNDD 174
>gi|156937491|ref|YP_001435287.1| radical SAM domain-containing protein [Ignicoccus hospitalis
KIN4/I]
gi|156566475|gb|ABU81880.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
Length = 352
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C FC E G LS D + +A + + V FTGG+PL+ S
Sbjct: 15 VSVTERCNFNCIFCH-SEGAGRGSFDELSVNDYD-MIAEATSRLGLKYVKFTGGEPLLRS 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA---N 214
L++++ + + + + + + P+R + LKEAG + +++H+
Sbjct: 73 D--LEEIIHSFKEHGFEE-ISITTNGFL-LPER-----TEGLKEAGVSWINVSLHSLKRQ 123
Query: 215 HPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250
+ + I + GI + V+L+GIN+D
Sbjct: 124 RFRRITGVDALNRVLNGIEKALENGIEVRVNVVVLRGINED 164
>gi|146319650|ref|YP_001199362.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
gi|146321848|ref|YP_001201559.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
gi|253752648|ref|YP_003025789.1| radical SAM superfamily protein [Streptococcus suis SC84]
gi|253754474|ref|YP_003027615.1| radical SAM superfamily protein [Streptococcus suis P1/7]
gi|253756407|ref|YP_003029547.1| radical SAM superfamily protein [Streptococcus suis BM407]
gi|145690456|gb|ABP90962.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
gi|145692654|gb|ABP93159.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
gi|251816937|emb|CAZ52586.1| radical SAM superfamily protein [Streptococcus suis SC84]
gi|251818871|emb|CAZ56714.1| radical SAM superfamily protein [Streptococcus suis BM407]
gi|251820720|emb|CAR47482.1| radical SAM superfamily protein [Streptococcus suis P1/7]
gi|292559267|gb|ADE32268.1| metallo cofactor biosynthesis protein [Streptococcus suis GZ1]
Length = 415
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP +I+++L + C + C CF+ G L ++ L + K +++E+ TGG
Sbjct: 102 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 157
Query: 153 DPLILS 158
+P+
Sbjct: 158 EPMAHP 163
>gi|76802239|ref|YP_327247.1| hypothetical protein NP3198A [Natronomonas pharaonis DSM 2160]
gi|76558104|emb|CAI49690.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 414
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + + + +++ E A A + + E+ TG D +
Sbjct: 124 ILPIARGCMSNCSYCITK-FATGRVDSPPVAENVEKARALV--HAGAKELRITGQDTGVY 180
Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181
+L ++L + I +R
Sbjct: 181 GWDTGERKLPELLDRICDIDGEFRVRLG 208
>gi|291522428|emb|CBK80721.1| SSU ribosomal protein S12P methylthiotransferase [Coprococcus catus
GD/7]
Length = 454
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
LK+ C +C +C ++ GS + ++ ++ AA + E G D
Sbjct: 156 LKIAEGCDKHCTYCIIPKLRGSYRSHSMDYLIKQAESLAAQGVKELNIVAQETTVYGTD- 214
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L K L ++LK L I+ + +R V P+ IN ELIQ +KE K
Sbjct: 215 LYNGQKMLPELLKRLCRIEGLSWIR----VLYCYPEEINEELIQVIKEEPK 261
>gi|290968565|ref|ZP_06560103.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781218|gb|EFD93808.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 440
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
D + P + H R LK+ C +C +C + L S+ +
Sbjct: 129 HSPDEFEEIPLYPAA-VTH---TRADLKIQEGCNNFCTYC-----IIPYTRGKLKSRRPD 179
Query: 133 AALAYIQEKSQ--IWEVIFTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
A + + + E++ TG + L +L+ L V LR S
Sbjct: 180 AIVEEAKRLVEAGFKELVLTGIHLGAYGKELAEKPTLAHILRRLVEETDVLRLRLGS--- 236
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHA 213
+D ++ +LI+ + EA + + +H
Sbjct: 237 -IDSLEVDDDLIRIINEAEQRICPHLHI 263
>gi|282858353|ref|ZP_06267533.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
gi|282588801|gb|EFB93926.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
Length = 72
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|282882041|ref|ZP_06290682.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis
315-B]
gi|281298071|gb|EFA90526.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis
315-B]
Length = 437
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
+K+ C C +C ++ G + + +D ++Y+ + ++ G
Sbjct: 147 VKISEGCNNNCSYCIIPKLRGKNRSRRI--EDIYEEVSYLAKNGAREIILIAQNTTDYGI 204
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
D + L K++K + I ++ +R V + P ELI
Sbjct: 205 D--LYGRYSLSKLIKEISKINDIKWIR----VLYLYPDHFTDELINEF 246
>gi|269956621|ref|YP_003326410.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
cellulosilytica DSM 15894]
gi|269305302|gb|ACZ30852.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
cellulosilytica DSM 15894]
Length = 380
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 23/195 (11%)
Query: 86 LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEK 141
+ G+V R+ + L C + C +C E + K V+S + + +
Sbjct: 47 VPGLVDRFGRTATDLRVSLTDRCNLRCTYCMPAEGLPTLPKDAVMSRTEIARLVGVATRE 106
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ +V FTGG+PL+ + L +++ + + + + + L+
Sbjct: 107 LGVRQVRFTGGEPLLRAD--LVDIVRDVAALPQRPEISLTTNAVG------LDHRARALR 158
Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI--------ILLSQSVLLKGINDD-- 250
+AG V I++ P F+ A AGI ++ +VL++G+N D
Sbjct: 159 DAGLDRVNISLDTLDPDTFARLARRPFLERTLAGISAAAEVFDVIKINAVLVRGLNLDHA 218
Query: 251 PEILANLMRTFVELR 265
++LA + ELR
Sbjct: 219 ADLLAWCLERGFELR 233
>gi|154249651|ref|YP_001410476.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
gi|154153587|gb|ABS60819.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
Length = 421
Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 27/156 (17%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E +I E +D I + R +K+ C C +C R + G++
Sbjct: 110 YWREDDISYEMVKDSIAE-------------RSRAFIKVEDGCNNGCTYCVIRSLRGTRI 156
Query: 123 GTVLSSKDTEAALAYI-QEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIKHVQI 177
+ + A I ++ ++ G D L K+L + I
Sbjct: 157 RSKPIEVVIKEAEQLITKKHKELVITGLNLGKYGKDIGT----NLAKLLNEVSKINGDFR 212
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+R S ++P+ ++ ELI + E K + +H
Sbjct: 213 IRLSS----INPEDLDDELINIILENDK-ICNHLHI 243
>gi|310640976|ref|YP_003945734.1| radical sam domain-containing protein [Paenibacillus polymyxa SC2]
gi|309245926|gb|ADO55493.1| Radical SAM domain-containing protein [Paenibacillus polymyxa SC2]
Length = 377
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD----PL 155
+VC VYCRFC GS +G VL E I+E ++ E++ GG P
Sbjct: 62 TNVCDVYCRFCAFYRRPGSDEGYVLPD---EVIFQKIKETQEVGGTEILMQGGVNPNLPF 118
Query: 156 ILSHKRLQKVLKTLRYI 172
L+ + + I
Sbjct: 119 SYYTDLLKAIKERFPDI 135
>gi|293402280|ref|ZP_06646418.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304387|gb|EFE45638.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 379
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 76 DPIGDNNHSPLKGIVHR----YPDRILLKL-LHVCPVYCRFCFRREMVG-SQKGTVLSSK 129
D + D L G+ YP ++ + C + C FC ++V ++ + + +K
Sbjct: 142 DAMEDEKEIKLFGLQKLTLLDYPQKMASTIFTGGCNMRCPFCQNADLVFLNENTSQIPTK 201
Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYI 172
D +A+++++ + E V TGG+PL+ + L+ L+T++ +
Sbjct: 202 DI---IAFLKKRRSVLEGVCITGGEPLL--NDTLESFLRTIKEL 240
>gi|256821541|ref|YP_003145504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
16069]
gi|256795080|gb|ACV25736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
16069]
Length = 446
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWE 146
+ ++ C YC FC R E V VL+ + + + + +
Sbjct: 148 TAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVLAECAQLAEQGVREINLLGQNVNAYR 207
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEA 203
I GD L +++ + I + +R+ + P+ +R + E+ + +
Sbjct: 208 GITHEGD-----TADLAELITYVAAIDGIDRIRYTTSHPVEFSERLIQVYAEVPELVSHL 262
Query: 204 GKPV 207
PV
Sbjct: 263 HLPV 266
>gi|163759697|ref|ZP_02166782.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
DFL-43]
gi|162283294|gb|EDQ33580.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
DFL-43]
Length = 345
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 39/179 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + E + ++ TGG+PL+
Sbjct: 30 VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCTVFVE-KGVRKIRLTGGEPLV-- 86
Query: 159 HKRLQKVLKTLR------YIKHV-------QILRFHS-------RVPIVDPQRINPELIQ 198
K + ++++ L + V Q+ RF S R V ++P+ +
Sbjct: 87 RKNIMQLIRGLSRHIDAGRMDEVTLTTNGSQLTRFASELYDCGVRRINVSIDTLDPDKFR 146
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255
+ G E ++ + ++ AG+ + +V LKG ND P+++
Sbjct: 147 QITRWG-------------ELAK-VLDGVAAAQAAGLKIKINAVALKGFNDTEIPDMMK 191
>gi|90416925|ref|ZP_01224854.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium
HTCC2207]
gi|90331272|gb|EAS46516.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium
HTCC2207]
Length = 296
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTG 151
++L++ + C C FC + + + S K E ++ ++ + V
Sbjct: 20 LILQVTNGCSYNKCSFC----EMYTDQQKRFSPKPIEKIEEELRGLAEAGYPVKRVFLAD 75
Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQIL 178
GD + LS +RL +L+ + VQ +
Sbjct: 76 GDAMTLSTRRLVDILQMINKYYPDVQRV 103
>gi|24375930|ref|NP_719973.1| molybdenum cofactor biosynthesis protein A [Shewanella oneidensis
MR-1]
gi|24350912|gb|AAN57417.1|AE015877_8 molybdenum cofactor biosynthesis protein A [Shewanella oneidensis
MR-1]
Length = 326
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + K LS + E ++ ++ TGG+P +
Sbjct: 17 MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAF-SLVGTQKIRITGGEPTLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 76 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 128
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 168
>gi|57234236|ref|YP_181685.1| MiaB family tRNA modification protein [Dehalococcoides ethenogenes
195]
gi|57224684|gb|AAW39741.1| tRNA modification enzyme, MiaB family [Dehalococcoides ethenogenes
195]
Length = 413
Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWE 146
R +K+ C +C +C RR + ++S + A Y + ++I E
Sbjct: 126 RTRSFIKIQDGCDNFCSYCIVPFVRRHKSCRRVDEIISEINLRQAEGYQEIVLTGTEIGE 185
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
G D L +++ + + LR S + P I P L+
Sbjct: 186 YASGGVD--------LAGLIEAILANTQIPRLRLSS----LQPGEITPRLLAL 226
>gi|313896785|ref|ZP_07830333.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312974702|gb|EFR40169.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 332
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C V +LS ++ + + I +V TGG+PL+
Sbjct: 14 ISVTDCCNLRCRYCMPAHGVKKLAHEDILSYEEILRDVRALAA-LGIRKVRLTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
+ +++ L+ I ++ +
Sbjct: 73 RD--IVTLVRGLKEIPGIETV 91
>gi|301064673|ref|ZP_07205062.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
NaphS2]
gi|300441215|gb|EFK05591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
NaphS2]
Length = 439
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ ++ C +C +C + G + + +D Y+ I E+ G +
Sbjct: 151 ISIMEGCNNFCSYCIVPYVRGRE--FFRAPEDILEEAEYLIS-EGIREITLLGQNVNSYV 207
Query: 159 HKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K+ +L L + H+ LRF + P+ + EL+ C K + IH
Sbjct: 208 WKKNHNNWNFSSLLYELAELDHLLRLRFTTSH----PKDFSDELLACFAHIEK-LAGHIH 262
>gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110]
gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110]
Length = 351
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 38/218 (17%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162
C V CRFC + S + A +A + + + +V+F G G+P L
Sbjct: 105 GCAVGCRFCMTGR---DGLLRQVGSAEIIAQVALARMRRPVRKVVFMGMGEPA----HNL 157
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKP--VYIAIHAN----- 214
V++ + + V + + + +P + L++A + +++H
Sbjct: 158 DNVMEAIELLGTVGN--IGHKNLVFS--TVGDPRAFERLQQARVRPALALSLHTTKAGLR 213
Query: 215 ------HPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPE----ILANLMRTFV 262
P + E + A R A A G + Q LL G+ND PE I+ L F
Sbjct: 214 KKLLPRAPN-MTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFG 272
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L + P + G + R ++E +++ +L ++
Sbjct: 273 VLNMIP---FNA--VEGVAFSRPSLERCEQMARTLHQR 305
>gi|18978436|ref|NP_579793.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM
3638]
gi|18894280|gb|AAL82188.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM
3638]
Length = 472
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFTGGD 153
L + + C + C +C+ ++ KG +L+ + E L + +Q + V F GG+
Sbjct: 93 LVMTYSCNLRCPYCYEGDI--KSKGGLLTREKIETILTFASAHAQGDKKPTISVSFYGGE 150
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL L+ K + L+ L +K + +R +S + + IN +++ + + I
Sbjct: 151 PL-LNWKGCEYTLQRLEEMKENKEIRDYSAGFVTNGTLINEDIVDAINNYNV-YSMQITL 208
Query: 214 NHPYEF 219
+ P E
Sbjct: 209 DGPKEI 214
>gi|117926243|ref|YP_866860.1| radical SAM protein [Magnetococcus sp. MC-1]
gi|117609999|gb|ABK45454.1| Radical SAM domain protein [Magnetococcus sp. MC-1]
Length = 293
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 97 ILLKLLHVCPV-YCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++L+ C V +C FC R K K+ E A V GD
Sbjct: 18 LILQATIGCSVNHCTFCSMYRHKRFHIKPLPQLFKEIEHAA---SAWPTARRVFLADGDA 74
Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178
L+L L+++L LR + +Q +
Sbjct: 75 LVLPTDHLERILDHLRRHLPQLQRV 99
>gi|312879890|ref|ZP_07739690.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
gi|310783181|gb|EFQ23579.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
Length = 373
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 26/150 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ L C + CR C+ + +S ++ L V+ +GG+PL
Sbjct: 30 VVWHLTDRCGLRCRHCY--AEATPEGERFVSLREGFRCLETFAAWGAP-AVLLSGGEPLE 86
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANH 215
H R L+ + + + R++ + L + G Y+ + +
Sbjct: 87 SPHGR--AFLERGAE--------LGLSLAVSTNGTRVDDSWAEALAKRG--AYVGVSLDG 134
Query: 216 PYEFSE----------EAIAAISRLANAGI 235
P E + A A + RL AG
Sbjct: 135 PQEIHDSFRGVPGAWNAAAAGLERLKRAGA 164
>gi|319646743|ref|ZP_08000972.1| HemZ protein [Bacillus sp. BT1B_CT2]
gi|317391331|gb|EFV72129.1| HemZ protein [Bacillus sp. BT1B_CT2]
Length = 528
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133
D + + + + + CP C +C + + S +
Sbjct: 181 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 240
Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191
+++E I V F GG P ++ + + + + + R V+ +R + V P
Sbjct: 241 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 299
Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + LK+ + I P + E + AI R
Sbjct: 300 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 333
>gi|92114198|ref|YP_574126.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM
3043]
gi|91797288|gb|ABE59427.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM
3043]
Length = 329
Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 38/177 (21%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
RY + + + C C +C +M + VL+ ++ E E + ++ TG
Sbjct: 13 RY---VRISVTDRCDFRCVYCMSEDMTFLPRAQVLTLEEIEQVARAFVE-LGVEKIRLTG 68
Query: 152 GDPLILSHKRLQKVLKTLRYIK----------------HVQILRF-HSRVPIVDPQRINP 194
G+PL+ + + ++ + + H + LR + + ++P
Sbjct: 69 GEPLV--RRGIDDLVGRIGALPGLKDFAMTTNGAGLVKHAKALREGGLQRLNISIDSLDP 126
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
E + L G E +A I +AG + +V+LKG NDD
Sbjct: 127 ERFRQLTRTGN--------------LEHVVAGIRAARDAGFERIKLNAVMLKGRNDD 169
>gi|300694498|ref|YP_003750471.1| radical_sam domain [Ralstonia solanacearum PSI07]
gi|299076535|emb|CBJ35860.1| conserved hypothethical protein, radical_SAM domain [Ralstonia
solanacearum PSI07]
Length = 398
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 95 DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWE 146
++ +LK++ C + C +C+ R + + V+S + + I E Q +
Sbjct: 20 NQAILKVVQRCNLDCTYCYVYNRGDDSWKTRLPVISDRVIDKLAERINEHCARFALQSFT 79
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171
+ GG+PL+L +R+++++ LR
Sbjct: 80 IEIHGGEPLLLGKRRMREMVDRLRS 104
>gi|169335621|ref|ZP_02862814.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
17244]
gi|169258359|gb|EDS72325.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
17244]
Length = 448
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
LK+ C +C +C V S+ E ++ + + E+I D
Sbjct: 153 AYLKVSEGCDKHCTYC-----VIPSIRGKQRSRKIEDIVSEAKRLADRGVKELILIAQDV 207
Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ ++L ++L+ L I+ + +R V + P+ ++ ELI K +
Sbjct: 208 GEYGTDLYGERKLPELLEELNKIESIHWIR----VLYIYPETVSDELIDKFVNLDKVL 261
>gi|218782945|ref|YP_002434263.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218764329|gb|ACL06795.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 334
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ R+P I + + H C + C +C ++ + + + A+ + + +
Sbjct: 18 LGRRFPASIGMIVTHRCNLRCAYCGFPDLPSDE----MDADQWLEAIHAFLQAGTLR-MG 72
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQR 191
F+GG+PL L++ L L H + ++ ++ + P+R
Sbjct: 73 FSGGEPL------LRQDLGRLLQAAHGKALITLNTNGLL-LPER 109
>gi|153853169|ref|ZP_01994578.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
gi|149753955|gb|EDM63886.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
Length = 481
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 19/117 (16%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILSHKR 161
C +C +C + S+D EA ++ I++ + EV+ G + + K
Sbjct: 198 GCNNFCSYC-----IVPYVRGRERSRDPEAIISEIRQLVADGVVEVMLLGQN-VNSYGKN 251
Query: 162 LQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
L+ +L+ + I+ ++ +RF + P+ ++ ELI+ + ++ K + +H
Sbjct: 252 LEHPITFAQLLERIEQIEGLERIRFMTSH----PKDLSDELIEVMGKS-KKICKHLH 303
>gi|325299811|ref|YP_004259728.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides salanitronis DSM 18170]
gi|324319364|gb|ADY37255.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides salanitronis DSM 18170]
Length = 158
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C+ C E G+ L+ K + ++ I+ + + F+GGDP S L
Sbjct: 26 GCSHRCKGCHNPESWNPLAGSPLTDKVIDGMISQIKANPLLDGITFSGGDPFYHSEAFL 84
>gi|228470224|ref|ZP_04055131.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas uenonis 60-3]
gi|228308175|gb|EEK17038.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas uenonis 60-3]
Length = 156
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C E GT L+ + + + I + + + +GGDP+
Sbjct: 25 GCSHHCPGCHNPESHSPLVGTPLTEEYLQQIIDEINDNPLLDGITLSGGDPMFSP----G 80
Query: 164 KVLKTLRYIKH 174
++L L+ +KH
Sbjct: 81 ELLTLLKRLKH 91
>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
Length = 470
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 105 CPVYCRFCFRREMVGSQK---GTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159
C C +C +++ K T L + E AL Y+Q Q+ ++ F GG P LS
Sbjct: 74 CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
++ ++++ + H Q++ +DP+++ + ++ L G +F
Sbjct: 134 AQMTRLMQAIGR--HFQLVPHGEYSIEIDPRKVTADNVKHLASLGFNRMSVG----VQDF 187
Query: 220 SEEAIAAISRLAN 232
+ AA++R+ +
Sbjct: 188 DPQVQAAVNRIQS 200
>gi|52784833|ref|YP_090662.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
gi|163119326|ref|YP_078263.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
gi|52347335|gb|AAU39969.1| HemZ [Bacillus licheniformis ATCC 14580]
gi|145902832|gb|AAU22625.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
Length = 502
Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133
D + + + + + CP C +C + + S +
Sbjct: 155 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 214
Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191
+++E I V F GG P ++ + + + + + R V+ +R + V P
Sbjct: 215 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 273
Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I E + LK+ + I P + E + AI R
Sbjct: 274 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 307
>gi|310658888|ref|YP_003936609.1| radical sam-superfamily protein [Clostridium sticklandii DSM 519]
gi|308825666|emb|CBH21704.1| Radical SAM-superfamily protein [Clostridium sticklandii]
Length = 352
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 14/118 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ CP C FC ++ + G D E +L I+ + I F G
Sbjct: 8 IFIPHQGCPNDCVFCNQKRITGKGASIDFEEIKSDIEDSLKTIKPDTLIEIAFFGGS--F 65
Query: 156 ILSHKRLQKVLKTLR----YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ LQ+ + + + +R +R P I+ E ++ LK +
Sbjct: 66 TAINTELQRRCLEIANYYKSMDARICDIRISTR-----PDAISKEKLEFLKMYNVSII 118
>gi|290968070|ref|ZP_06559619.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781976|gb|EFD94555.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 8/116 (6%)
Query: 98 LLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155
+L++ C C FC M + S + + + + + + GD L
Sbjct: 21 ILRVTIGCSHNRCTFCS---MYKDSSYRIRSLAEIDGIIERGARAMPYVRRIFLADGDAL 77
Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+L L +LK + R + D R PE +Q LK+AG +
Sbjct: 78 VLPTASLLHILKKCYDTFPQIT--RIGAYATPNDINRKTPEELQALKDAGLDILYM 131
>gi|291280509|ref|YP_003497344.1| molybdenum cofactor biosynthesis protein A [Deferribacter
desulfuricans SSM1]
gi|290755211|dbj|BAI81588.1| molybdenum cofactor biosynthesis protein A [Deferribacter
desulfuricans SSM1]
Length = 329
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C++C + +LS +D + + E I ++ TGG+PL+
Sbjct: 18 ISVTDRCNFRCKYCMPQHNFKMLSHSDILSYEDIIFVVKTLTE-VGIEKIRITGGEPLV- 75
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
K + + + L +K+++ L + LK+ GK ++
Sbjct: 76 -RKNINYLFERLGGLKNIKDLTLTTNG-------------SLLKKYGKTIF 112
>gi|270296162|ref|ZP_06202362.1| cfr family radical SAM enzyme [Bacteroides sp. D20]
gi|317480739|ref|ZP_07939825.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36]
gi|270273566|gb|EFA19428.1| cfr family radical SAM enzyme [Bacteroides sp. D20]
gi|316903080|gb|EFV24948.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36]
Length = 346
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%)
Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
DR L + C + C+FC M G Q T L+S ++ + E+ ++ V+ G
Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 155
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
G+PL L +VLK L + S P+R+ L + + E+
Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 204
Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
+ I++H+ P E A +I+ + +L + Q V KG+
Sbjct: 205 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260
Query: 248 NDDPEILANLMRTFVELRIK 267
ND L++ L +
Sbjct: 261 NDSLPYAKELLKLLRGLDCR 280
>gi|160892219|ref|ZP_02073222.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492]
gi|156858697|gb|EDO52128.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492]
Length = 350
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%)
Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
DR L + C + C+FC M G Q T L+S ++ + E+ ++ V+ G
Sbjct: 104 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 159
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
G+PL L +VLK L + S P+R+ L + + E+
Sbjct: 160 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 208
Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
+ I++H+ P E A +I+ + +L + Q V KG+
Sbjct: 209 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 264
Query: 248 NDDPEILANLMRTFVELRIK 267
ND L++ L +
Sbjct: 265 NDSLPYAKELLKLLRGLDCR 284
>gi|312897930|ref|ZP_07757343.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Megasphaera micronuciformis F0359]
gi|310620964|gb|EFQ04511.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Megasphaera micronuciformis F0359]
Length = 167
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C +C CF E + GT+ + K+T+ ++Y++E I + GG+P+ +
Sbjct: 24 TGCTHHCYNCFNEEYQNPEFGTLWTDKETDQVISYLKE-PTISGLTLLGGEPMQNTDGL- 81
Query: 163 QKVLKTLRYIKHVQILR 179
I ++ +R
Sbjct: 82 ---------IPVIRRVR 89
>gi|303234163|ref|ZP_07320809.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Finegoldia magna BVS033A4]
gi|302494704|gb|EFL54464.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Finegoldia magna BVS033A4]
Length = 166
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R + C + C+ CF +E G + T + Y+ + +I + GG+P
Sbjct: 18 RCTFFVTG-CSLNCKNCFNKEYQDPNFGEKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75
Query: 156 ILSHKRLQKVLKTLRY 171
L ++++ +R
Sbjct: 76 ESCDD-LIEIVEKIRE 90
>gi|253568256|ref|ZP_04845667.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251842329|gb|EES70409.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 306
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + S ++ + Y+ + E+ +
Sbjct: 8 AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 65
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 66 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 114
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 115 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 137
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ K++ ++++ G+ + ++ PG
Sbjct: 138 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 170
>gi|229105357|ref|ZP_04236004.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
gi|228678069|gb|EEL32299.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock3-28]
Length = 339
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LK+AG
Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKKAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ +G+ND
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKQGMNDH 177
>gi|237653116|ref|YP_002889430.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
gi|237624363|gb|ACR01053.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
Length = 359
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C RE+ G + +LS ++ + + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPREVFGDDYAFLPRRQLLSFEEILRVARLFVAR-GVRKIRITGGE 99
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
PL+ + +++ L + V+ + + + P+L + LK+AG
Sbjct: 100 PLLRKD--VDRLIGMLAALDGVE-VTLTTNGV------LLPKLARRLKDAGLH 143
>gi|154499609|ref|ZP_02037647.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC
29799]
gi|150271687|gb|EDM98931.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC
29799]
Length = 205
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--------EAALAYIQE 140
I + Y + + L + C C FC R KG++ + EA +++
Sbjct: 4 ITYEYEGGLYVNLTNRCDCACVFCLRH---NGHKGSIYADDLWLDHEPTREEALDDFLRR 60
Query: 141 K-SQIWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHS 182
+ E++F G G+P+ + ++ L ++ +R ++
Sbjct: 61 DLTSYREIVFCGFGEPMY-RWDDIAWLIDALKARCPNLPPVRINT 104
>gi|153808740|ref|ZP_01961408.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
gi|149128566|gb|EDM19784.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
Length = 439
Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + ++S +A A + +I GD
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQAGQAAAEGGKEIVLTGVNIGD 207
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++K L ++ ++ R S ++P + E+I+ + + H
Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSR---SFMPHF 260
Query: 214 NHP-YEFSEEAIAAISR 229
+ P S+E + + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277
>gi|319901401|ref|YP_004161129.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P
36-108]
gi|319416432|gb|ADV43543.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P
36-108]
Length = 346
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 50/203 (24%)
Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
DR L + C + C+FC M G Q T L++ ++ + E+ ++ V+
Sbjct: 99 DDRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMM 154
Query: 151 G-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKE 202
G G+PL L +VLK L + S P+RI L + ++E
Sbjct: 155 GMGEPL----DNLDEVLKALEVMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEE 203
Query: 203 AGKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKG 246
+ + I++H P E A +I+ + +L + Q V KG
Sbjct: 204 SDCHLAISLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KG 259
Query: 247 INDD---PEILANLMRTFVELRI 266
+ND + L L+R + RI
Sbjct: 260 VNDSLLYAKELLKLLRGL-DCRI 281
>gi|306816147|ref|ZP_07450285.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
gi|305850543|gb|EFM51000.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
Length = 445
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ TLR + + RV D +RI+
Sbjct: 120 TPSALSAHDLTRIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|300710670|ref|YP_003736484.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3]
gi|299124353|gb|ADJ14692.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3]
Length = 414
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + G + + E A A + + E+ TG D +
Sbjct: 124 ILPIARGCMSNCSYCITKHATGRVDSPTI-EANVEKARALV--HAGAKELRITGQDTGVY 180
Query: 158 SHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L ++L + I+ +R P I+ EL + E K
Sbjct: 181 GWDDGERSLPELLSRICAIEGEFRVRLGMANPGGI-HGIHEELAEVFAENEK 231
>gi|304317725|ref|YP_003852870.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779227|gb|ADL69786.1| Radical SAM domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 416
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+++ + + C + C +C +K +LS+ D + A+ I + EV+ +GG+PL
Sbjct: 95 KVVFSITNRCNLSCEYCCVDADNYLKKDDILSTSDIKRAIDKILKLK-PQEVVISGGEPL 153
Query: 156 I 156
+
Sbjct: 154 V 154
>gi|255020721|ref|ZP_05292781.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
51756]
gi|254969837|gb|EET27339.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
51756]
Length = 437
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 21/126 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C +C FC G + + ++ + + EV G +
Sbjct: 136 TAFVTVQEGCDKFCTFCVVPHTRGREFSRPMPDILREVRQLVD-----QGVREVTLLGQN 190
Query: 154 P-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ L ++L+ L I + LR+ + P R +
Sbjct: 191 VNAYRGATGLIGEGDLAELLERLARIPDLLRLRYTTSHPNNLDDR-------LIAAHRDI 243
Query: 207 VYIAIH 212
+A H
Sbjct: 244 PILAAH 249
>gi|212694739|ref|ZP_03302867.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855]
gi|237710987|ref|ZP_04541468.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA]
gi|212662718|gb|EEB23292.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855]
gi|229454831|gb|EEO60552.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA]
Length = 368
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 22/160 (13%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
R P +L C + C CF R V + G + + +Q+ ++ +
Sbjct: 20 QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ TGG+P++ +++ LR + + L + I+ E+++ L+
Sbjct: 79 LLTGGEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRR 129
Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIIL 237
E A+ RL A I +
Sbjct: 130 INVTLYGDSRETYGRLCHNPQGYTLCMEALKRLKKADIDV 169
>gi|126653928|ref|ZP_01725772.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905]
gi|126589588|gb|EAZ83728.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905]
Length = 370
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++C + C C + ++ L + L + E + + TGG+P ++S
Sbjct: 33 FTTTNLCNMRCAHCAVGYTLQNKDPEALP---IDLILRRLDEIPHLKTLSITGGEP-MMS 88
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +Q + L H + +R
Sbjct: 89 KKSVQNYVLPLLKYAHERGVR 109
>gi|256827640|ref|YP_003151599.1| putative Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
gi|256583783|gb|ACU94917.1| predicted Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
Length = 561
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 29/182 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
P + ++ C + C C GS G + E A I + + I +I TG
Sbjct: 140 PRIVAWEITRSCNLSCAHCRAAAEFGSYAGEL----SLEQCKAVIDDIATITNPILIITG 195
Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
G+P + + + + V + IV E+ + E G + +
Sbjct: 196 GEPFMRPDIWDIIDYARER-GCMPVV-----GTNGTIV-----TEEIAHKMAEHGIRRMS 244
Query: 209 IAIHANHPYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+++ E EAI I AG+ + + K + E + +L +
Sbjct: 245 VSLDFPTAAEHDGFRGQQGSFNEAIRGIRLAQQAGVGVQINMTVTKKNAERMEEMHDLSQ 304
Query: 260 TF 261
Sbjct: 305 QL 306
>gi|114567375|ref|YP_754529.1| molybdenum cofactor biosynthesis protein A [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122317679|sp|Q0AVU6|MOAA_SYNWW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|114338310|gb|ABI69158.1| GTP cyclohydrolase subunit MoaA [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 326
Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 34/170 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQEKSQIWEVIFTGGDPLI 156
+ L C + CR+C G T S E L I + I ++ TGG+PL+
Sbjct: 14 ISLTDRCNLRCRYC--MPETGVDNLTHYSILSLEEMARLVRIASELGIQKIRLTGGEPLV 71
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
+ +L + + I + + + + L + LK AG + ++
Sbjct: 72 RRNVPQLISYIAQIPRIDDIALTTNGT---------LFAALAEELKTAGLNRINFSL--- 119
Query: 215 HPYEFSEE-------------AIAAISRLANAGI-ILLSQSVLLKGINDD 250
E AI + + + V+++G NDD
Sbjct: 120 --DSLVPEKFKYITRRGDLSKVKEAIFKALELDMHPVKINMVVIRGFNDD 167
>gi|303326380|ref|ZP_07356823.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302864296|gb|EFL87227.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 391
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
+ ++ C + C+ C G + + + A A I Q+ +IFTGGDP
Sbjct: 48 VAWEVTRSCNLACKHCRAEAHPEPYPGELST----DEAKALIDTFPQVGNPIIIFTGGDP 103
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG 204
++ + L H + L P I PE + +KEAG
Sbjct: 104 MMRPD------VYELVAYTHAKGLTC-----AFSPNGTLITPESARRIKEAG 144
>gi|257462828|ref|ZP_05627234.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
gi|317060457|ref|ZP_07924942.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
gi|313686133|gb|EFS22968.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
Length = 436
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +C +C G + ++ + L ++ +I + G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGRSRSRRPEKVLEEIDKLL--VEGFREIILIGINLG 202
Query: 153 DPLI-LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209
D L + + +++ + +Q +R S V P RI + P +
Sbjct: 203 DYGKDLKEEINFEDLVRNILKKDLLQRVRIGS----VYPDRITESFMTLF---DHPKMMP 255
Query: 210 AIHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 256 HLHIS-LQSCDDTVLRNMRR 274
>gi|322418737|ref|YP_004197960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
gi|320125124|gb|ADW12684.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
Length = 326
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 30/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + V + +LS ++ + + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNMRCCYCMPAQGVAKLEHKEMLSYEELFKVASACVAQ-GIEKIRVTGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
+ L L L + ++ L + EL L+EAG + I++
Sbjct: 74 -RRGLVDFLARLSRVPGLKELVLTTNGLQ------LEELALPLREAGVARLNISL----- 121
Query: 217 YEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGIND 249
E A I+R A+ AGI L V+++G+ND
Sbjct: 122 DSLQPETFARITRGADLNKVLAGIDAAQKAGFGPLKINMVVMRGVND 168
>gi|160947755|ref|ZP_02094922.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
gi|158446889|gb|EDP23884.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
Length = 443
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C ++C +C G K + E A+ + EVI TG
Sbjct: 149 KTRAYIKIQEGCNMFCTYCIIPYARGPIKSRPI-DDIYEEAVK--LANNGYKEVIITGIH 205
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
D + + RL V++ L I+++ +R S
Sbjct: 206 VGSYGLD--LGNDTRLIDVIEKLSTIENLDRIRLSS 239
>gi|325275801|ref|ZP_08141670.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas sp. TJI-51]
gi|324099072|gb|EGB97049.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas sp. TJI-51]
Length = 322
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+
Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
RL L + + ++ + + Q + +L Q + + +++ P
Sbjct: 73 SP--RLDAFLAAVAKLG-LEDI-----SLTTNGQMLGRKLPQLQAAGIRRLNVSLDTLDP 124
Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248
F + A AA+ R G+ + V ++G N
Sbjct: 125 LAFRQIARGGDLATVLAAMERARAMGMQIKVNMVPMRGQN 164
>gi|293402175|ref|ZP_06646313.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304282|gb|EFE45533.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 433
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 30/171 (17%)
Query: 66 ELNILPEEREDP-IGDNNHSPLKG-----------IVHRYPDRILLKLLHVCPVYCRFCF 113
E++ + RE P + + HS L G +V P LK+ C C +C
Sbjct: 94 EIDAVISIREYPHLHEILHSLLDGKELVSYGKSERMVSSKPWTAYLKIAEGCSNRCTYCA 153
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP------LILSHKRLQKVLK 167
++ T + + A + + E++ D L L+ +L+
Sbjct: 154 I-PLIRGDNVTFPMEQLVQEAKE--LAQRGVKELVLIAQDTTKYGVDLYGKRSLLE-LLQ 209
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIHAN 214
L I +R + P I+ +LI+ + + K + HAN
Sbjct: 210 KLHEIDGFHWIRI----LYMYPDEIDEDLIEGMAKLPKVLPYFDIPMQHAN 256
>gi|189219894|ref|YP_001940535.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
infernorum V4]
gi|189186752|gb|ACD83937.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
infernorum V4]
Length = 337
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 99 LKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C C +CF +++ S+K + LS ++ A + + K + TGG+PL+
Sbjct: 26 ISVTDRCNERCIYCFPQDLGFLSKKDSQLSFEELYAVVFHGAMKHGFRDFRITGGEPLV- 84
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKPVYIAI-HANH 215
L ++ L + +R + + R EL + + AG V + +
Sbjct: 85 RKGTLA-FIRRLTRTPGISSVRLSTNGTLLGYYAR---ELKEA-QIAGINVSLDTLKPSL 139
Query: 216 PYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN 248
+ + + I GI + +VLLKGIN
Sbjct: 140 YKKITGGDIVPVLEGIEECRKVGIEPIKLNTVLLKGIN 177
>gi|20807824|ref|NP_622995.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
gi|81481565|sp|Q8RA52|RIMO_THETN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|20516384|gb|AAM24599.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
Length = 436
Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%)
Query: 59 QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
Q + EE+ +L D + D + I+ P LK+ C C FC
Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164
++ G K + E A + + E+I D L+L +
Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215
Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
+L+ L I+ ++ +R P + ELI+ +K K V YI I H E
Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNQKIVKYIDIPLQHSSE 266
>gi|300704632|ref|YP_003746235.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
CFBP2957]
gi|299072296|emb|CBJ43629.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
CFBP2957]
Length = 373
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E + E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|224368087|ref|YP_002602250.1| NifB2 [Desulfobacterium autotrophicum HRM2]
gi|223690803|gb|ACN14086.1| NifB2 [Desulfobacterium autotrophicum HRM2]
Length = 424
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 65/253 (25%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
R+ L + C + C FC R+ ++ + S A+ Y+++ K I V
Sbjct: 18 GRVHLPVAPRCNIQCNFCNRKFDCVNESRPGVCSSILSPFQAMEYLKQVVNRKKNISVVG 77
Query: 149 FTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQILRFH 181
G GDP + L + L + + HV I
Sbjct: 78 IAGPGDPFANPEQTLTTIEMISKKYPDMLLCLASNGLNLPEYLDDIARFNVSHVSI---- 133
Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAAISRLANAGIIL 237
I+ ++ ++ K + P + E+ +A+++ L GII+
Sbjct: 134 --TINAIDLAISEKIYSWVRFGKKSLA-------PGQGVKLLLEKQLASVAGLKERGIIV 184
Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYYLHHPDLAAGT--SHFRLTI-EE 289
+++L GIND + +A + + PYY G+ +H R EE
Sbjct: 185 KVNTIVLPGINDHHVTDIAKEMAKMGVDLL--NCMPYY-----PNEGSNFAHLREPSREE 237
Query: 290 GQKIVASLKEKIS 302
KI A ++ +
Sbjct: 238 IAKIQADAQKYLP 250
>gi|213023904|ref|ZP_03338351.1| hypothetical protein Salmonelentericaenterica_15757 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 30
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
+SG P ++ G K +D
Sbjct: 1 MVSGYMVPRLAREIGGEPSKTPLDLQ 26
>gi|150390794|ref|YP_001320843.1| RNA modification protein [Alkaliphilus metalliredigens QYMF]
gi|149950656|gb|ABR49184.1| RNA modification enzyme, MiaB family [Alkaliphilus metalliredigens
QYMF]
Length = 433
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C YC +C G + + + + EV+ TG
Sbjct: 141 KTRAFLKIQEGCNQYCAYCIIPYARGPIRSR--GKIEIIQEVQTLVNN-GFKEVVLTGIH 197
Query: 154 PLI----LSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L L VLK + I+ ++ +R S ++P + + L + K
Sbjct: 198 VASYGKDLGDHEGLLDVLKRVNAIEGLERIRLSS----LEPTLFSDAFLSALSKLEK--- 250
Query: 209 IAIHA 213
I H
Sbjct: 251 ICDHF 255
>gi|289661642|ref|ZP_06483223.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 343
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
LP+ P+ D PL+ + L ++ C C +C + V G
Sbjct: 6 LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182
LS E + + +V TGG+PL+ L ++ L I+ ++ L +
Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLSAIEGIEDLALTTNGT 114
Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
R + Q RI P L + + + + E + I+
Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174
Query: 229 RLANAGI 235
+ GI
Sbjct: 175 CVVQRGI 181
>gi|326317352|ref|YP_004235024.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323374188|gb|ADX46457.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 386
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G G +LS ++ + ++ TGG+
Sbjct: 51 ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEISRLARVFLAH-GVRKIRLTGGE 109
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ + L+ +++ L +
Sbjct: 110 PLL--RRHLENLVEQLAGL 126
>gi|227827329|ref|YP_002829108.1| radical SAM protein [Sulfolobus islandicus M.14.25]
gi|229584545|ref|YP_002843046.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
gi|227459124|gb|ACP37810.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25]
gi|228019594|gb|ACP55001.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
Length = 350
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPSELNTEESRKLLEDIARFGKV-VIVFTGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
PL S + ++++ + + V + P P R++ E ++ + + + I++
Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114
>gi|212638682|ref|YP_002315202.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
gi|212560162|gb|ACJ33217.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
Length = 467
Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + + + + +I I T
Sbjct: 159 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 216
Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG + +L+ + +K ++ LR S ++ +I E+I L+++ K +
Sbjct: 217 GGYGEDMKDYNFAMLLRDMDEQVKGLKRLRISS----IEASQITDEVIDVLRQSDK-IVR 271
Query: 210 AIHA 213
+H
Sbjct: 272 HLHI 275
>gi|322418241|ref|YP_004197464.1| Radical SAM domain-containing protein [Geobacter sp. M18]
gi|320124628|gb|ADW12188.1| Radical SAM domain protein [Geobacter sp. M18]
Length = 506
Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +CF + + LS+ + L + I +V +GGDPL
Sbjct: 144 LMFSNDCHTNCAYCFAKGHCVPESKQ-LSTGRWKELLRE-AKSLGIEQVTLSGGDPLFRK 201
Query: 159 HKRLQKVLKTLRYIK 173
K+++ L +
Sbjct: 202 DAL--KLIEELIDLD 214
>gi|83748466|ref|ZP_00945488.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
UW551]
gi|83724877|gb|EAP72033.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
UW551]
Length = 373
Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E + E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|303239306|ref|ZP_07325834.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
gi|302593092|gb|EFL62812.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
Length = 440
Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 38/157 (24%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ + +S +
Sbjct: 89 SCMNKCIFCFIDQLPKGMRDTLYFKDDDSRLSFFMGNYVTLT----------NMSFDDID 138
Query: 164 KVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
+++K + I + H+ ++ L K + +
Sbjct: 139 RIIKYRMSPI----NVSVHT----------TNPDLRVLMLKNKN-------------AGD 171
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ I +L + GI + Q VL GIND E+ ++
Sbjct: 172 VMLKIQKLIDGGIEVNCQIVLCAGINDGEELDRSISE 208
>gi|315608919|ref|ZP_07883891.1| RNA modification enzyme [Prevotella buccae ATCC 33574]
gi|315249299|gb|EFU29316.1| RNA modification enzyme [Prevotella buccae ATCC 33574]
Length = 434
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 43/202 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147
LK+ C +C +C M G + + L ++E E+
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204
+ G D + H + +++ + I V+ +R H P P +L+ ++E
Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPNVC 246
Query: 205 --KPVYIAIHAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKGI----ND 249
+ + H + H + +E + I ++ A GI + + LL G D
Sbjct: 247 RYLDIALQ-HISDHILSRMHRHVTKQETVELIRKMREAVPGIHIR--TTLLVGFPGETED 303
Query: 250 DPEILANLMR--TFVELRIKPY 269
D L + +R F + Y
Sbjct: 304 DFRQLVDFVREARFERMGAFAY 325
>gi|326203328|ref|ZP_08193193.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986586|gb|EGD47417.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
Length = 468
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDTEAALAYIQEK-SQIW 145
+ HR ++L++ C + C +C G ++ + + ++ Y+ + ++I
Sbjct: 79 LEHR-VQFLILQVTQSCNLRCDYCTYSGQYNTRGHSGKSMTWELAKKSIDYLYQHSNEIE 137
Query: 146 EVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+V + GG+PL L ++K ++ ++ P RI
Sbjct: 138 KVRISFYGGEPL-LEIDLIKKCVEYVKE---------------TYPHRIT 171
>gi|255691410|ref|ZP_05415085.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
gi|260623056|gb|EEX45927.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
Length = 439
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + +++ L I+ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGETFFDLVQALDQIEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|320353886|ref|YP_004195225.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320122388|gb|ADW17934.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 289
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
+ ILL++ C C FC M Q+ ++ S A + Y + G
Sbjct: 15 NSILLQVTTGCSHNKCTFCG---MYKGQRFSIKSDDIIFADIDYASNYFSFARRLFLCDG 71
Query: 153 DPLILSHKRLQKVLKTLR-YIKHVQILRF--HSRVPIVDPQRI-NPELIQCLKEAGKPVY 208
D LI+ +RL +L+ + + V + +S+ R+ E ++ L++ G +
Sbjct: 72 DALIVPQQRLLAILQRIETRLPQVTRVGIYANSKSL-----RLKTVEELRQLRQHGLGIV 126
Query: 209 IA 210
Sbjct: 127 YM 128
>gi|310643623|ref|YP_003948381.1| arylsulfatase regulator (fe-s oxidoreductase) [Paenibacillus
polymyxa SC2]
gi|309248573|gb|ADO58140.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Paenibacillus
polymyxa SC2]
Length = 442
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 85/224 (37%), Gaps = 29/224 (12%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKG 123
L ED + + + + + +R+ L+ C C +CF ++ ++
Sbjct: 60 LIECGYIVEDNMNEKAYVKVNLLKNRFESSNLMLTIAPTMACNFRCVYCFEKDQYHNKT- 118
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+S + ++ + +++ + + + + GG+PLI K++ ++ + I +++
Sbjct: 119 --MSEETAQSIVNFVKTNASKLDTLNVTWYGGEPLIA-MKQIVRISEDFLEICKENNIQY 175
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
+ I + +N E +Q L G + P E + + ++++
Sbjct: 176 -TASVITNGYLLNKEKVQTLISCGVNDIQVT-VDGPKEV-HDLRRPLVSGRGTFDVIMNN 232
Query: 241 SVLLKG-------INDDPEILANLMR--------TFVELRIKPY 269
+KG IN D + NL + +E + PY
Sbjct: 233 LKQIKGMIKIFMRINTDQDNWLNLHEIVGFLKENSLLEN-VIPY 275
>gi|298530196|ref|ZP_07017598.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509570|gb|EFI33474.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 348
Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 42/192 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L+L C + C +C+ G+ L ++ AA+ E ++ GG+PL
Sbjct: 31 LELSMACNLRCIYCY--AESGAPLENELRFEEITAAVDQAVELGARRIIVLGGGEPLAHP 88
Query: 159 H--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
LQ + K I + + I E + E G I +
Sbjct: 89 QILPVLQHIYKRGAAID---LFTNGT--------LITAETAEIFAELGVSPVIKM----- 132
Query: 217 YEFSEEAIAAIS--------------RLANAGII-----LLSQSVLLKGINDDPEILANL 257
+ E ++ L AG L Q+V+ + + + L +
Sbjct: 133 NSMNPEVQDRLAGRPGAFQDISQGFKHLQQAGYPSSGLALGVQTVICRH---NLDELPEM 189
Query: 258 MRTFVELRIKPY 269
E + PY
Sbjct: 190 WAWIRENSMVPY 201
>gi|325479090|gb|EGC82190.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 472
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +ED + + K + ++ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKELKYKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ LS ++ + +Q++ + G DP+ + + + + T+ IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDQGHKRLALEAGEDPVNNPLEYILESIHTIYNIKH 167
>gi|302874938|ref|YP_003843571.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
743B]
gi|307690444|ref|ZP_07632890.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
743B]
gi|302577795|gb|ADL51807.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
743B]
Length = 445
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L++ C C +C + G + + + A + + E+I D
Sbjct: 145 KQTAYLRISEGCSNNCSYCIIPRIRGKYR-SRTKESILKEAEDLVSS--GVKELILVAQD 201
Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I + K L ++L+ L IK ++ +R P+ I ELI +
Sbjct: 202 TTRYGIDIYNKKVLHELLRDLSKIKGIKWIRI----LYCYPEEIYDELIDEIAN 251
>gi|256825735|ref|YP_003149695.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
gi|256689128|gb|ACV06930.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
Length = 333
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 86 LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEK 141
G+V R+ + + L+ C + C +C E V K +LS ++ A+A +
Sbjct: 3 TPGLVDRFGRVHTDLRISLIDKCNLRCTYCLPAEGVPWMAKDELLSREEL-RAIAAVAVA 61
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
S I E+ TGG+PL+ L+ ++ L ++
Sbjct: 62 SGITEIRLTGGEPLLRPD--LEDLVADLASLE 91
>gi|304440349|ref|ZP_07400238.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371101|gb|EFM24718.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 444
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 14/113 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
+K+ C +C +C ++ G + L ++ + Y+ E ++ G
Sbjct: 149 VKISEGCDNFCTYCIIPKLKGKNRSRKL--ENIVGEVKYLVENGTREVILIAQNTTDYGI 206
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D + RL K+L L I+ ++ +R V + P ELI K K
Sbjct: 207 D--LYGEYRLAKLLHELEKIEDLKWIR----VMYLYPDHFTKELIDEFKNNKK 253
>gi|301020499|ref|ZP_07184586.1| radical SAM domain protein [Escherichia coli MS 69-1]
gi|300398687|gb|EFJ82225.1| radical SAM domain protein [Escherichia coli MS 69-1]
Length = 445
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
LTP A ++ P D R +P + + + E+ + + + R+
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
+ + C +C FC F + + ++ E A + + + + I V F GG
Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119
Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
P LS L +++ LR + + RV D +RI+
Sbjct: 120 TPSALSAHDLARIINILREKLPLAPDCEITIEGRVLNFDAERIDA 164
>gi|189425283|ref|YP_001952460.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
gi|189421542|gb|ACD95940.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
Length = 442
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 17/127 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R L++ + C C +C + +V + EA + EV+ T
Sbjct: 146 HTRAFLQIQNGCETGCSYCI-VPIARGPSRSVPPPEVLEAVSRLVAS--GYQEVVLTGIH 202
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + L +++ L V LR S ++P + EL+ K++ +
Sbjct: 203 MGAYGLD--LSPPGSLTALVQQLEDQNVVPRLRLGS----IEPNELTDELLTLFKKSSR- 255
Query: 207 VYIAIHA 213
+ +H
Sbjct: 256 LCHHLHI 262
>gi|73748729|ref|YP_307968.1| MiaB family tRNA modification protein [Dehalococcoides sp. CBDB1]
gi|147669495|ref|YP_001214313.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
gi|73660445|emb|CAI83052.1| tRNA modification enzyme, MiaB family [Dehalococcoides sp. CBDB1]
gi|146270443|gb|ABQ17435.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
Length = 416
Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 30/155 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C RR ++S + A Y E++
Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178
Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-- 205
TG + S L +++ + + LR S + P I L+ K
Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRLCN 234
Query: 206 PVYIAIH---------ANHPYEFSEEAI--AAISR 229
++A+ N PY ++ AI R
Sbjct: 235 HFHMALQSGSDRILGLMNRPYSLTDYTRTLEAIRR 269
>gi|170694265|ref|ZP_02885419.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
gi|170140688|gb|EDT08862.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
Length = 181
Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFVELRIKP 268
E + + A +L G +L+Q L+G +D D L L+ F+ I P
Sbjct: 102 ELTPQGHEAAQQLPGIGAAVLNQQ--LRGFSDADLATLIELLSRFIANGIDP 151
>gi|269139140|ref|YP_003295841.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
gi|267984801|gb|ACY84630.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
gi|304559064|gb|ADM41728.1| Radical SAM family protein HutW [Edwardsiella tarda FL6-60]
Length = 466
Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 27/145 (18%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--- 95
+TP +A A + IP E +P + P+ + +G H
Sbjct: 5 ITPYLA------------AAEGIPFPERWATMPWRHQQPLP--ADALAQGWQHLCQRTLP 50
Query: 96 ---RILLKLLHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
R++ + C +C FC ++ V + E+AL +Q+ + I
Sbjct: 51 PNKRLVYVHIPFCATHCTFCGFYQNRFSEQAVARYCDYLQREIALESALP-LQQSAPIHA 109
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171
+ GG P LS ++L +++ LR
Sbjct: 110 IYLGGGTPSALSAEQLYRLITQLRS 134
>gi|251780641|ref|ZP_04823561.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084956|gb|EES50846.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 451
Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68
DL + N +K ++ + +K +SN Y ++ LI+ I
Sbjct: 32 DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+D + HS + Y + L ++H C + C++CF E V+S
Sbjct: 75 ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128
Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
+ A+ Y+ ++S E+ GG+P + ++ ++K R
Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173
>gi|188590051|ref|YP_001922114.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
gi|188500332|gb|ACD53468.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
Length = 451
Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68
DL + N +K ++ + +K +SN Y ++ LI+ I
Sbjct: 32 DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+D + HS + Y + L ++H C + C++CF E V+S
Sbjct: 75 ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128
Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
+ A+ Y+ ++S E+ GG+P + ++ ++K R
Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173
>gi|84687584|ref|ZP_01015459.1| pyrroloquinoline quinone biosynthesis protein PqqE [Maritimibacter
alkaliphilus HTCC2654]
gi|84664374|gb|EAQ10863.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacterales
bacterium HTCC2654]
Length = 383
Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 65/268 (24%)
Query: 79 GDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + G+ H P +LL++ H CP+ C +C + + L+++D L
Sbjct: 6 HEPDSKLAPGVGTTHGLPVAVLLEVTHRCPLQCPYCS-NPLNLERPAAELATEDWVRVLH 64
Query: 137 YIQEKSQIWEVIFTGGDPL--------------------------ILSHKRLQKVLKTLR 170
+ + +V F+GG+P+ LS +RL + +
Sbjct: 65 EL-ADLGVLQVHFSGGEPMARRDIVELVAAATDAGLYSNLITSGVNLSRERLAALAEA-- 121
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
+ HVQI Q E + H + A
Sbjct: 122 GLSHVQI----------SFQGSESETADRVGGYRNG--------HAKKL-----EAARLT 158
Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSHF 283
AG L +V+ + + L ++ VEL YY A
Sbjct: 159 REAGFPLTVNAVMHRQ---NLHQLPEMIDMAVELGAQRIEVANVQYYGWALRNRAALMPT 215
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYIL 311
IE +IVA +E++ G+ Y++
Sbjct: 216 MEQIETCNRIVAEAEERLRGILMIDYVV 243
>gi|218530828|ref|YP_002421644.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
chloromethanicum CM4]
gi|240139398|ref|YP_002963873.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
gi|218523131|gb|ACK83716.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
chloromethanicum CM4]
gi|240009370|gb|ACS40596.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
Length = 344
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88
Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + + L H++ S++ R PEL + L V +
Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138
Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
+ AI+R AGI + +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184
>gi|187735294|ref|YP_001877406.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425346|gb|ACD04625.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 415
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
R P ++ + C + C C+ KG + D + A I ++ ++F
Sbjct: 45 RKP-IVVWNITRTCNLKCVHCYADASARKFKGEL----DWDQCCAVIDDLADYKVNALLF 99
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+GG+PL+ R ++L+ K +++ + RI PE KE G
Sbjct: 100 SGGEPLVHP--RFMELLERATG-KGLKV------TISTNGTRITPEAAARFKELG 145
>gi|157112872|ref|XP_001657654.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
gi|108884620|gb|EAT48845.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
Length = 481
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
SPL R+ + + L C + C++C E V + K +L++ + LA +
Sbjct: 100 QETDSPLTDNFGRFHSYLRISLTERCNLRCKYCMPAEGVQLTPKDNLLTTDEVLR-LATL 158
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH------SRVPIVDPQRI 192
+ + ++ TGG+P + L ++++ L+ I ++ + +R + QR
Sbjct: 159 FVEQGVRKIRLTGGEPTVRKD--LPEIIERLKRIPLLESVGITTNGLMLTRQLVGL-QRA 215
Query: 193 NPELIQC 199
+ +
Sbjct: 216 GLDALNI 222
>gi|78044427|ref|YP_360054.1| radical SAM domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996542|gb|ABB15441.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 331
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 47/216 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G++ LS+++ +A + I + + +IF+GG+PL+
Sbjct: 3 VSWNTTNQCNLYCEHCYRDA--GAKVEEELSTEEGKALIDEIVK-AGFKIMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ +++ +K V F + + I E+ Q LK+AG + + I
Sbjct: 60 RED--ILELVDYASQKGLKPV----FGTNGTL-----ITLEMAQKLKKAG-ALAMGISL- 106
Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
E A+ + AG+ + +++ D+ E L +
Sbjct: 107 --DSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTDFA-- 162
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
VE+ +++ F + I
Sbjct: 163 -VEIGAIAHHIF----------FLVPTGRAVNIEQE 187
>gi|295400797|ref|ZP_06810773.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111351|ref|YP_003989667.1| radical SAM protein [Geobacillus sp. Y4.1MC1]
gi|294977060|gb|EFG52662.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216452|gb|ADP75056.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1]
Length = 390
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 23/195 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
P ++ ++ C + C C + + + Y + +FTGG
Sbjct: 27 PFIVIWEVTRACQLKCVHCRADAQPVPDPRELTHEEGIKLIDDIYEMNNPML---VFTGG 83
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAI 211
D ++ L ++ IK + P V +++ L G +
Sbjct: 84 DCMMRED--LFELAD--YAIKKGMRVSITPSATPNVTKEKMEKAKQVGLSRWGFSLDGPT 139
Query: 212 HANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
H E + E I ++ L + L +V+ + D E +A L+
Sbjct: 140 PEIHDRFRGTPGSFELTIEKIKYLNEL---NMPLQINTVISRYNYDHLEEMAKLVADLKA 196
Query: 264 LRIKPYYLHHPDLAA 278
+ +Y+
Sbjct: 197 VM---WYIFLLVPTG 208
>gi|169832127|ref|YP_001718109.1| radical SAM domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638971|gb|ACA60477.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 453
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 46/230 (20%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPL 155
++ + C + C C + + L+ + L +E +V+ F+GG+P
Sbjct: 102 AIIDVTQACDLKCPAC----LADAGGSGFLAPEQVARLLDVYRECEGNPDVLQFSGGEPT 157
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHA 213
+ L ++L L K +++++ ++ RI + + L E VY+
Sbjct: 158 LHP--ELFELL-ALARAKGIRLVQLNTNGL-----RIARDDAFLARLAEFRPSVYL---- 205
Query: 214 NHPYEFSEEAIA----------------AISRLANAGIILLSQSVLLKGINDDPEILANL 257
+F + A+ RL++ GI ++ + ++ G+ND L +L
Sbjct: 206 ----QFDGLSAVVYRRIRGADLLADKLLAVERLSDCGIPIVLSATVVPGVND--GELGDL 259
Query: 258 MR-TFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQ--KIVASLKEKISG 303
+R RI+ + P G + I+ L+ + G
Sbjct: 260 VRFALQNPRIR-GLMFQPVAHIGRHRLEFDPLNRITLPDILKGLERQTEG 308
>gi|163852070|ref|YP_001640113.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
extorquens PA1]
gi|163663675|gb|ABY31042.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
extorquens PA1]
Length = 344
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88
Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + + L H++ S++ R PEL + L V +
Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138
Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
+ AI+R AGI + +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184
>gi|15898641|ref|NP_343246.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
P2]
gi|284175851|ref|ZP_06389820.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
98/2]
gi|13815098|gb|AAK42036.1| Coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
P2]
gi|261603136|gb|ACX92739.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2]
Length = 350
Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + LS+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLSCKHC-RANAIDKPLPGELSTEESKKLLEDIARFGKV-VIVFTGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIA 210
PL S + + + Y K + ++ + P R+ E ++ + + + I+
Sbjct: 65 PLSRSD-----IFEIMEYAKSLGLI------VSIAPSPSYRLRDETMKMISNYARYMSIS 113
Query: 211 I 211
I
Sbjct: 114 I 114
>gi|323692405|ref|ZP_08106641.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
WAL-14673]
gi|323503545|gb|EGB19371.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
WAL-14673]
Length = 324
Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 30/163 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKS--QIWEVIFTGGD 153
+ + C + C +C + LS K E LA+ +E + I + TGG+
Sbjct: 16 VSVTDRCNLNCAYC------RPENSPFLSRKALLTSEEILAFCREAAILGIRHIKITGGE 69
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + +++ L+ ++ + + + E + LKEAG I I
Sbjct: 70 PLLRTDC--CSIVEKLKKTPGIETVTLTTNGL------LLSEHLGRLKEAGID-GINISM 120
Query: 214 NHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKG 246
+ P + E + +I A GI + V++ G
Sbjct: 121 DTPDRACYAALTGSDRLPELLDSIRSTAGLGIPMKINCVIMDG 163
>gi|222445792|ref|ZP_03608307.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
DSM 2375]
gi|222435357|gb|EEE42522.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
DSM 2375]
Length = 234
Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L+ + CP+ CR+C E++ K+ + A +I V+ +GG+PL
Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72
Query: 156 ILSHKRLQ 163
+ S ++
Sbjct: 73 VQSDAVIE 80
>gi|146296852|ref|YP_001180623.1| RNA modification protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410428|gb|ABP67432.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 434
Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C +C +C GS LSS + + + E + TG
Sbjct: 141 RTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSSILDEVQRL-----ASNGYKEFVITG 195
Query: 152 GD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ L V++ + I+ V+ +R S PIV + L++ +++
Sbjct: 196 INISAYGKDLDYKVTLVDVIEEISKIEKVRRIRLSSLEPIVMKEDFIKRLVK-IEKLCHH 254
Query: 207 VYIAIH 212
+++++
Sbjct: 255 LHLSLQ 260
>gi|295100395|emb|CBK97940.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii L2-6]
Length = 431
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 18/119 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C C +C G + S + A L + S EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--SEESILAELRQLAA-SGYREVVLSAIS 197
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L ++++ ++ ++ +R S +DP + PE I L K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCARVEGIERIRLGS----LDPDMLTPESITRLAAVDK 248
>gi|298529710|ref|ZP_07017113.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511146|gb|EFI35049.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 355
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L ++C CRFC + G + V+S A+ + I E+ GG +
Sbjct: 58 LNYTNICSNACRFCAYSKRAGEEGAYVMSVDQIRVAVKS-RMHEPIDEIHVVGG---LNP 113
Query: 159 HKRLQKVLKTLRYIKHVQ 176
L+ L+ IK ++
Sbjct: 114 DLPYDYYLEMLKSIKEIR 131
>gi|207743614|ref|YP_002260006.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
IPO1609]
gi|206595013|emb|CAQ61940.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
IPO1609]
Length = 391
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E + E + ++ TGG+
Sbjct: 66 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 125 PLLRKDIERLVEMLARL 141
>gi|126460321|ref|YP_001056599.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126250042|gb|ABO09133.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 378
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 30/168 (17%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
H P + + CP+ C+ C R + + LS+++ + + + E ++
Sbjct: 12 HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELSTEEGKRLIEQVAEFGDPKPLLII 70
Query: 150 TGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPV 207
TGGDPL+ + L +++ + V + P V ++ E ++ +K +G K +
Sbjct: 71 TGGDPLMRAD--LFELVDYANSLGVPVSL------APAVSKS-LDDEALRRIKSSGVKSI 121
Query: 208 YIA-------IHANHPYEFS------EEAIAAISRLANAGIILLSQSV 242
I+ H E E ++AI R + GI + +V
Sbjct: 122 SISLDGATAETH----DELRGVPGSFAETVSAIKRALDLGISVQVNTV 165
>gi|134046659|ref|YP_001098144.1| radical SAM domain-containing protein [Methanococcus maripaludis
C5]
gi|132664284|gb|ABO35930.1| Radical SAM domain protein [Methanococcus maripaludis C5]
Length = 369
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--------FT 150
+++ CP CRFC ++ G + + E+ + ++ I V T
Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G P + ++L+K++K L IK + L F + V P+ + E + + + YI
Sbjct: 194 GTKP---NIEKLEKLMKHLFEIK--KRLFFGTFPSEVRPEFVTSETLDLINKYCDNRYI- 247
Query: 211 IHANHPYEFSEEAIAAISR 229
H S+E + I R
Sbjct: 248 -HFG-AQSGSDEVLKHIRR 264
>gi|326791736|ref|YP_004309557.1| biotin and thiamin synthesis associated [Clostridium lentocellum
DSM 5427]
gi|326542500|gb|ADZ84359.1| biotin and thiamin synthesis associated [Clostridium lentocellum
DSM 5427]
Length = 472
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI+ L L + C C +C L+ ++ A + +Q+
Sbjct: 77 QRFYGNRIVMFAPLYLSNYCVNGCIYCPYHHKNKHITRKKLTQEEIRAEVIALQDMGHKR 136
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DP + + +KT+ IKH
Sbjct: 137 LALEAGEDPANNPLDYILESIKTIYSIKH 165
>gi|261349664|ref|ZP_05975081.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Methanobrevibacter smithii DSM 2374]
gi|288861622|gb|EFC93920.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Methanobrevibacter smithii DSM 2374]
Length = 234
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L+ + CP+ CR+C E++ K+ + A +I V+ +GG+PL
Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72
Query: 156 ILSHKRLQ 163
+ S ++
Sbjct: 73 VQSDAVIE 80
>gi|153806285|ref|ZP_01958953.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
gi|149130962|gb|EDM22168.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
Length = 436
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + + L ++++ + I V+ +R H P +L + ++E G
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPIDLFRVMRERGN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
+T E+ +++ ++++ G+ + ++ PG
Sbjct: 268 --------------VTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|114798903|ref|YP_759322.1| radical SAM domain-containing protein [Hyphomonas neptunium ATCC
15444]
gi|114739077|gb|ABI77202.1| radical SAM domain protein [Hyphomonas neptunium ATCC 15444]
Length = 311
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 16/149 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L +C + C C+ + + L+ D L + E+++I TGG+P +
Sbjct: 36 LNTGTLCNIECANCYIESSPKNDRLVYLTLADVLPFLDELTEQAEIG---ITGGEPFMCP 92
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----KPVYIAIH-- 212
L + L + +L R P++ P R+ L G V + H
Sbjct: 93 D-ILAIMGAALVRGHSLLVLTNAMR-PMMRP-RVQAGLKDLAARYGARMTLRVSLDSHDA 149
Query: 213 -ANHPYEFSEEAIAAI---SRLANAGIIL 237
N A + LA AGI +
Sbjct: 150 ALNDAERGEGAFAEACTGLAWLAQAGIPV 178
>gi|71281310|ref|YP_268103.1| radical SAM domain-containing protein [Colwellia psychrerythraea
34H]
gi|71147050|gb|AAZ27523.1| radical SAM domain protein [Colwellia psychrerythraea 34H]
Length = 300
Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKS-QIWEVIFTGG 152
++L++ + C C FC +M S+ K E + I V G
Sbjct: 20 LILQVTNGCSWNKCTFC---DMYTSEDKKFKPKKVDVIEQEILKIANSGISTRRVFLADG 76
Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQIL 178
D ++L RL+++L+ + ++ V +
Sbjct: 77 DAMMLPFNRLKEILELIKLHLPQVSRV 103
>gi|291166144|gb|EFE28190.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
Length = 462
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF ++ K ++S + + AL ++ E S EV F GG+PL
Sbjct: 101 LHVAHTCNLACDYCFAKQGKYHGKDGLMSFEVGKKALDFLIEHSGTRTNLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLK 167
++ + +++++
Sbjct: 161 -MNWEVVKQLVA 171
>gi|255524216|ref|ZP_05391175.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
P7]
gi|296185337|ref|ZP_06853747.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
carboxidivorans P7]
gi|255512041|gb|EET88322.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
P7]
gi|296050171|gb|EFG89595.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
carboxidivorans P7]
Length = 446
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+++ C +C +C ++ G + S ++ + ++ + E+I D
Sbjct: 148 TAYIRIAEGCNNFCTYCIIPKIRGKYRSR--SMENIIKEAQSLAQQ-GVKEIILVAQDTT 204
Query: 156 -----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
I K L ++++ L I+++ +R P+ I ELI +
Sbjct: 205 RYGTDIYGKKALSELIRKLSKIENIHWIRI----LYCYPEEITEELIDEIA 251
>gi|254515478|ref|ZP_05127538.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
NOR5-3]
gi|219675200|gb|EED31566.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
NOR5-3]
Length = 361
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 28/207 (13%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRRE 116
+P K ++ + + + + ++ R+ R+ L + C C +C +
Sbjct: 5 ILPVKSAQRLVTAAQRSTLRAMHENTPPTLIDRFGRRVDYLRLSVTDRCDFRCVYCMAED 64
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
M K +L+ ++ + ++ TGG+PL+ + ++++ L + +
Sbjct: 65 MTFVPKSEILTLEELAQVAQAF-VNLGVRKIRLTGGEPLV--RHNIMQLVEQLGAMPGLD 121
Query: 177 IL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--------EEAI 224
L S++ QR L Q L +AG K + I++ + P F E+ I
Sbjct: 122 ELVMTTNGSQL-----QR----LAQPLSDAGVKRLNISLDSLQPRRFRQITRVGHLEQVI 172
Query: 225 AAISRLANAGI-ILLSQSVLLKGINDD 250
A I AG L +V+++G NDD
Sbjct: 173 AGIDAACAAGFERLRINAVIMRGDNDD 199
>gi|315651497|ref|ZP_07904518.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
gi|315486232|gb|EFU76593.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
Length = 440
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 16/116 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
LK+ C C +C + G+ + L A I E+I
Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPL-DDLIAQAKD--LATQGIKELILVAQETTL 202
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D I K L K+LK L I+ ++ +R P+ I ELI + K
Sbjct: 203 YGVD--IYGKKTLPKLLKELAKIEGIEWIRI----LYCYPEEITDELIDVIASEDK 252
>gi|294673495|ref|YP_003574111.1| 30S ribosomal protein S12 methylthiotransferase RimO [Prevotella
ruminicola 23]
gi|294473743|gb|ADE83132.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
ruminicola 23]
Length = 437
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150
+K+ C +C +C + G K ++ + Y+ Q + E+ +
Sbjct: 137 AYIKISEGCDRHCAYCAIPLITG--KHQSRPMQEILDEVRYLVSQGTKEFNVIAQELTYY 194
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D + + + ++++ + I V+ +R H P P +L++ ++E
Sbjct: 195 GVD--LDGKQHIAELIEQMADIPGVEWIRLHYAYPTHFPW----DLLRVIRE 240
>gi|251770958|gb|EES51543.1| radical SAM family protein [Leptospirillum ferrodiazotrophum]
Length = 357
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 69/199 (34%), Gaps = 51/199 (25%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKS----QIWEVIF 149
+ L C + CRFC R +G + + A +++ I ++F
Sbjct: 101 TLCLSTQAGCGIGCRFC-RTASMGLTRNLSTAEILSQWLLAARFVETLPPGESHIDHIVF 159
Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHV-------QILRFHSRVPIVDPQRINPELIQCLK 201
G G+PL L+ ++ +R + H + + + + P RI+ L
Sbjct: 160 MGMGEPL----ANLEALIPAIRSLTHPDGAGLSPRRITVSTSGLV--P-RIDT-----LG 207
Query: 202 EAGKPVYIAIHANHP-----YEFSE--------EAIAAISRLANAGIILLS------QSV 242
EA V +AI P E E +AA R L + + V
Sbjct: 208 EANTGVRLAISLCAPDDALRREIMPVGRIYSIEEILAACRRF-----PLRNRDRITFEYV 262
Query: 243 LLKGINDDPEILANLMRTF 261
LL G+ND P L R
Sbjct: 263 LLAGVNDSPLQARQLGRLL 281
>gi|238619478|ref|YP_002914303.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
gi|238380547|gb|ACR41635.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
Length = 350
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
PL S + ++++ + + V + P P R++ E ++ + + + I++
Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114
>gi|164686351|ref|ZP_02210381.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM
16795]
gi|164601953|gb|EDQ95418.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM
16795]
Length = 441
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 36/154 (23%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q V T +S + +
Sbjct: 93 SCRNKCVFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEEDID 142
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
++K I + + H+ P E + + HA +
Sbjct: 143 NIIK--YRISPIN-ISVHTTNP----------------ELRRKMITNKHA-------GKL 176
Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
I ++RLA+A I + Q VL G ND E+ L
Sbjct: 177 IDTMNRLADAHIEMNCQIVLCPGYNDKEELDRTL 210
>gi|150021472|ref|YP_001306826.1| biotin synthase [Thermosipho melanesiensis BI429]
gi|149793993|gb|ABR31441.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
Length = 341
Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 15/144 (10%)
Query: 74 REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
D D S I +Y R +++ + C + C +C R + K ++
Sbjct: 23 STDKYNDEILSLADEIRGKYVGNEVHIRAIIEFSNYCKMDCLYCGLRAPNKNLKRYRMTP 82
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
++ I +K+ V+ +G DP + L+ ++ ++ + L R
Sbjct: 83 EEIYKRAQLIAQKNIKTIVLQSGEDPFY-TTDILKDLIIKIKSLDIAITLSIGER----- 136
Query: 189 PQRINPELIQCLKEAGKPVYIAIH 212
+ E + KE G Y+ H
Sbjct: 137 ----DFEEYKIWKETGADRYLMRH 156
>gi|323474371|gb|ADX84977.1| Fe-S oxidoreductase family [Sulfolobus islandicus REY15A]
gi|323476690|gb|ADX81928.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4]
Length = 350
Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
PL S + ++++ + + V + P P R++ E ++ + + + I++
Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYTRYMSISL 114
>gi|258544941|ref|ZP_05705175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
ATCC 15826]
gi|258519861|gb|EEV88720.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
ATCC 15826]
Length = 456
Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 15/124 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC FC G + D A A + + + E+ G +
Sbjct: 151 TAFVSVMEGCSKYCTFCVVPYTRGEEVSRPF--DDVIAECASLAAQ-GVREINLLGQNVN 207
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L +++ + I + +RF + P+ LI+ + +
Sbjct: 208 AYRGALFDGGTADLALLIEYVAAIDGIDRVRFTTSHPV----EFTDNLIEVYRRVP-QLV 262
Query: 209 IAIH 212
+H
Sbjct: 263 SHLH 266
>gi|194334590|ref|YP_002016450.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
DSM 271]
gi|194312408|gb|ACF46803.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
DSM 271]
Length = 452
Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 20/136 (14%)
Query: 85 PLKGIVHRY---PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY 137
P ++ + R LK+ C C +C R + VL A Y
Sbjct: 138 PAHSLIEKREMGRSRAFLKIQDGCDYGCGYCAIPLARGRSLSIDPDVVLDGARALAGAGY 197
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E++ TG + L LR + V + R RV ++P + ELI
Sbjct: 198 C-------EIVLTGVNIAAYRFGELD-FAGLLRLLDQVDVQRI--RVSSIEPDCLTDELI 247
Query: 198 QCLKEAGKPVYIAIHA 213
+ + + I H
Sbjct: 248 DVVASSQR---IMPHF 260
>gi|295696236|ref|YP_003589474.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
gi|295411838|gb|ADG06330.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
Length = 484
Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILSH 159
C YC +C ++ + L +D A + + E I EV G + L L
Sbjct: 195 GCNKYCTYCI-VPFTRGRERSRLP-EDVVAEVKQLAE-EGIREVTLLGQNVNDYGLDLGD 251
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+L+ + I ++ +RF + +P +LI +
Sbjct: 252 VDFADLLQQVARIPGIERVRFTTS----NPWNFTDKLIDVIAA 290
>gi|148643466|ref|YP_001273979.1| molybdenum cofactor biosynthesis protein A [Methanobrevibacter
smithii ATCC 35061]
gi|89953725|gb|ABD83341.1| MoaA [Methanobrevibacter smithii]
gi|148552483|gb|ABQ87611.1| molybdopterin cofactor biosynthesis protein A, MoaA
[Methanobrevibacter smithii ATCC 35061]
Length = 309
Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%)
Query: 92 RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+Y IL + + + C C +C +++ + I + + ++
Sbjct: 9 KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
+GG+PLI + +++ + + I I + + + LKEAG V
Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116
Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
I++ +P E + I + G+ + VL+KGIN++ + ++
Sbjct: 117 NISLDTLNPETYKKVTTKNLLESSKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174
Query: 259 RTFVELRIK 267
E I
Sbjct: 175 EFCKEHGII 183
>gi|301163425|emb|CBW22976.1| putative oxidoreductase [Bacteroides fragilis 638R]
Length = 432
Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P EL + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPKELFRVMRER 242
>gi|90418074|ref|ZP_01225986.1| molybdenum cofactor biosynthesis protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90337746|gb|EAS51397.1| molybdenum cofactor biosynthesis protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 352
Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 27/167 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 37 VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRLSSAFIA-KGVRKLRLTGGEPLV-- 93
Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
K + ++++L H++ L S++ R EL C + V +
Sbjct: 94 RKNIMHLVRSLSR--HLESGALEELTLTTNGSQL-----ARFADELADCGVK-RLNVSLD 145
Query: 211 I-------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + I AGI + +V LKG N+D
Sbjct: 146 TLDPDKFKQITRWGELDR-VMGGIRAAQAAGIKIKLNAVALKGFNED 191
>gi|83590234|ref|YP_430243.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83573148|gb|ABC19700.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 441
Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ C +C FCF G + + +D A L Y+Q ++ V TGG+PL+
Sbjct: 94 FFISLQCHRHCFFCFNPNQEG-YEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLH 152
Query: 158 SHKRLQ 163
+ L
Sbjct: 153 PEETLA 158
>gi|313903997|ref|ZP_07837377.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
gi|313471146|gb|EFR66468.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
Length = 487
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
+E+ + +++ D + + P+ Y + + +++ C +C +C + G +K
Sbjct: 168 HPDEMVVDIQQKTDLMVEQ--LPVD---RTYKFKSGVNIMYGCNNFCSYCIVPYVRGREK 222
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKTLRYIKHVQI 177
D + + I EV+ G + + ++L+++ I ++
Sbjct: 223 SREPL--DILREIEQLVADGVI-EVMLLGQNVNSYGKTLENPVSFAELLESVAQIDGLRR 279
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+RF + P+ ++ ELI + + + +H
Sbjct: 280 VRFMTSH----PKDLSDELIAVMAKYPDKICPHLH 310
>gi|307565114|ref|ZP_07627622.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A]
gi|307346145|gb|EFN91474.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A]
Length = 72
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKIKVEMSPYDLTK---GRIVFR 70
>gi|288802855|ref|ZP_06408292.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
gi|288334672|gb|EFC73110.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
Length = 449
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C A + E++ TG
Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ +Q R S ++P I+ ELI E+
Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265
Query: 211 IHA 213
H
Sbjct: 266 PHF 268
>gi|302346286|ref|YP_003814584.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
gi|302150387|gb|ADK96648.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
Length = 449
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C A + E++ TG
Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ +Q R S ++P I+ ELI E+
Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265
Query: 211 IHA 213
H
Sbjct: 266 PHF 268
>gi|296127653|ref|YP_003634905.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
12563]
gi|296019469|gb|ADG72706.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
12563]
Length = 474
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C G L+ + A + +Q + TG DP S
Sbjct: 94 LYLSNYCINGCVYCPYHAKNGHIARKQLTQDEIRAEVTALQNMGHKRLALETGEDPDYAS 153
Query: 159 HKRLQKVLKTLRYIKH 174
+ L + +KT+ IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169
>gi|73661954|ref|YP_300735.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|82592974|sp|Q49ZI6|MOAA_STAS1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|72494469|dbj|BAE17790.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 340
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L + C C +C +E+ G K +L+ + +A + + + ++ TGG+
Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMVR-IAQVYTQLGVKKIRITGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L K++ L ++ V+ +
Sbjct: 77 PLLRRD--LDKLIYQLNQLEGVEDI 99
>gi|302542868|ref|ZP_07295210.1| radical SAM [Streptomyces hygroscopicus ATCC 53653]
gi|302460486|gb|EFL23579.1| radical SAM [Streptomyces himastatinicus ATCC 53653]
Length = 321
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P L++ C + CR C+ G +S D + + + +V F GG+
Sbjct: 8 PQFAWLEITGFCNLNCRHCYANSSSQGDHG-DMSDADWIRVIDQL-NGLGVRDVQFIGGE 65
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIA-- 210
P L + L H ++ R+ + I PE+ + L G + +
Sbjct: 66 P------TLHQSLPAFIRHAH----KYAMRIEVFSNMTHIRPEVWEALTLPGVRLAFSYY 115
Query: 211 --IHANHPYEFSEE------AIAAISRLANAGIILLSQSVL--LKGINDDPEILANLMRT 260
+H E +E A + + GI + SV+ L+G + AN
Sbjct: 116 SDNETDH-DEVTEVRGSHARTRANVEKARELGIKMRG-SVIHVLEG-----QREANAHHE 168
Query: 261 FVELRIK 267
++L I+
Sbjct: 169 LLQLGIR 175
>gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
thailandensis E264]
gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis Bt4]
gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
gi|123537978|sp|Q2T101|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
Length = 457
Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
L+ + K + +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265
>gi|296133089|ref|YP_003640336.1| protein of unknown function DUF512 [Thermincola sp. JR]
gi|296031667|gb|ADG82435.1| protein of unknown function DUF512 [Thermincola potens JR]
Length = 445
Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 47/214 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ + C C FCF +M + ++ D Y Q V T
Sbjct: 80 ETATFDGITSCQNRCVFCFVDQMPAGMRKSLYIKDD-----DYRLSFLQGNFVTLT---- 130
Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L+ + +Q+++ L + + H+ P ++ L+
Sbjct: 131 -NLTAEAMQRIINMRLSPL----YISVHTTNP--------DLRVKMLRNKK--------- 168
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIK 267
+ + + +LA+AGI + +Q VL GIND E+ L L + I
Sbjct: 169 ------AARVMEQLQQLADAGIEMHTQIVLCPGINDGAELDRTLDDLTGLWPAVQSVAIV 222
Query: 268 PYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEK 300
P L AG + R +T EE + ++ + +
Sbjct: 223 PVGLTGHR--AGLTELRTVTPEEARDLINRINSR 254
>gi|295399226|ref|ZP_06809208.1| RNA modification enzyme, MiaB family [Geobacillus
thermoglucosidasius C56-YS93]
gi|294978692|gb|EFG54288.1| RNA modification enzyme, MiaB family [Geobacillus
thermoglucosidasius C56-YS93]
Length = 451
Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G ++ S+D + + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +L+ L + ++ LR S ++ +I E+I L+ +
Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|312110172|ref|YP_003988488.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
gi|311215273|gb|ADP73877.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
Length = 451
Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G ++ S+D + + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +L+ L + ++ LR S ++ +I E+I L+ +
Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis TXDOH]
Length = 457
Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
L+ + K + +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265
>gi|114797605|ref|YP_760268.1| molybdenum cofactor biosynthesis protein A [Hyphomonas neptunium
ATCC 15444]
gi|114737779|gb|ABI75904.1| molybdenum cofactor biosynthesis protein MoaA [Hyphomonas neptunium
ATCC 15444]
Length = 330
Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 32/179 (17%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + VC C +C GS L++ + E + I +V TGG+P +
Sbjct: 21 LSVTEVCNFRCTYCLPDGYRKTGSMD--FLAADEIERLVRAFTG-LGIRKVRLTGGEPTV 77
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
L +++ + V+ + + P+RI+ + L +
Sbjct: 78 RKD--LTQLIARISATPGVEKVALTTNGWN-LPRRIDEWVGAGLTNLNVSI--------- 125
Query: 217 YEFSEEAIAAI---SRLAN--AGI---------ILLSQSVLLK-GINDDPEILANLMRT 260
EA I RLA+ AG+ + +VLL+ G+ +D +R
Sbjct: 126 DSLDREAFHRITGHDRLADVLAGLECALALPLKTVKVNAVLLRDGLEEDFSSWTEFVRE 184
>gi|298291280|ref|YP_003693219.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
gi|296927791|gb|ADH88600.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
Length = 348
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 33 VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ L + L + ++ + + S++ R EL C K + +++
Sbjct: 92 DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142
Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
P F A I AGI + +V L+G N+D
Sbjct: 143 LDPQRFRALTRWGDLNKVLAGIDAAQEAGIHVKLNAVALRGENED 187
>gi|322420929|ref|YP_004200152.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. M18]
gi|320127316|gb|ADW14876.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. M18]
Length = 332
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 29/188 (15%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+YP ++L+ H+C + C C R T+ + L + E V
Sbjct: 23 QEKYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQEMMTLQECLNSVDECPAP-VVTI 78
Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+P + + +++ L+ KH+ + +++ + LK
Sbjct: 79 TGGEPFLYP--HIFELIDAVLKRGKHIY---LCTNALLLEKA------LDTLKPHP-NFV 126
Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
+ +H H E A+S + A G L + + + K N + L
Sbjct: 127 LNVHLDGMEETHDRILERPGTFKIAMSAIKKAKALGFRLCTNTTIFKETN--LIEIEMLF 184
Query: 259 RTFVELRI 266
++ +
Sbjct: 185 SHLRDIGV 192
>gi|229118218|ref|ZP_04247576.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-3]
gi|228665265|gb|EEL20749.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
Rock1-3]
Length = 339
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G +L+ + E + ++ TGG+
Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
PL+ L K++ L I + + + + + + LKEAG
Sbjct: 79 PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130
Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ N ++ I I AG+ + V+ KG+ND
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177
>gi|255658493|ref|ZP_05403902.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
DSM 20544]
gi|260849292|gb|EEX69299.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
DSM 20544]
Length = 329
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R + + + L C + CR+C E V + +L + + + + +V
Sbjct: 6 QRKIEYVRISLTDRCNLRCRYCMPEEGVEKLRHEDILRFDEIVRIVRALAS-LGVRKVRL 64
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PLI + + ++++ + + ++ +
Sbjct: 65 TGGEPLI--RRNIVELVREIHAVPGIETI 91
>gi|207725239|ref|YP_002255635.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
MolK2]
gi|206590473|emb|CAQ37435.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
MolK2]
Length = 391
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E + E + ++ TGG+
Sbjct: 66 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 125 PLLRKDIERLVEMLARL 141
>gi|94264027|ref|ZP_01287827.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93455538|gb|EAT05725.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 351
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + ++ + + L I +Q V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL L + + LR + + E+ + LKE G +
Sbjct: 64 PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114
Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H N P F I A I L S K D + L +
Sbjct: 115 GADAAVHDNFRSQPGAFDG-TINATRLFREHDIPFLFNSSFTKRNQADIPRVYRLAKEL- 172
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G+ I++ L
Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196
>gi|330685605|gb|EGG97251.1| YfkB-like domain protein [Staphylococcus epidermidis VCU121]
Length = 380
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 16/135 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++C + C C + ++ L L I + + TGG+P + S
Sbjct: 35 FTTTNLCNMRCSHCAVGYTLQTKDPEPLPMDIIYRRLDEI---PNLRTLSITGGEP-MFS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
K ++ V+K L H + + + PQ ++ + + +H +H
Sbjct: 91 KKSIKNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 142
Query: 216 -PYEFSEEAIAAISR 229
EF++ A+ +
Sbjct: 143 TIQEFTDVGFGAMKK 157
>gi|319650009|ref|ZP_08004158.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
gi|317398190|gb|EFV78879.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
Length = 375
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 24/180 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ +L C + C C R E + LS + + + I+E + ++FTGGD
Sbjct: 11 PFIVIWELTRACQLKCLHC-RAEAQYRRDPRELSFDEGKYLIDQIKEMNNPM-LVFTGGD 68
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
PL+ + + + +R S P P + E I+ KE G +
Sbjct: 69 PLMRQDVFDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIEKAKEVGLARWAFSL 119
Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H F I I L I + +V+ + D E +A ++
Sbjct: 120 DGPKAEIHDHFRGTAGSFD-LTIERIKYLHELEIPVQINTVISRYNIDYLEEMAKVVEEL 178
>gi|292491535|ref|YP_003526974.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
halophilus Nc4]
gi|291580130|gb|ADE14587.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
halophilus Nc4]
Length = 335
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G + + +L+ ++ + I + +V TGG+
Sbjct: 16 VSVTDRCNFRCPYCMPKEIYGRKWAFLPRNELLTFEEISRLVR-IFVTLGVEKVRLTGGE 74
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
PL+ L+++++ L I+ +Q L +
Sbjct: 75 PLLRQD--LEQLVRMLASIEALQDLTLTT 101
>gi|302873840|ref|YP_003842473.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307689915|ref|ZP_07632361.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|302576697|gb|ADL50709.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 467
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 43/182 (23%)
Query: 82 NHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++P+ RY P+ ++L L +VC C +C GS+ LS D +
Sbjct: 122 QYNPV-----RYESPEELVLSLSYVCNHKCIYCCNS--SGSRIEDELSFNDWIKVIDE-A 173
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR------VPIVDPQRIN 193
+ ++F+GG+PL+ +IK V+ ++ + + I+
Sbjct: 174 ADLGVETILFSGGEPLMYPD-----------FIKLVKR----TKDNGIYPIVSTNGTLIS 218
Query: 194 PELIQCLKEAGKPVYIAIHANHPYE------FS-----EEAIAAISRLANAGIILLSQSV 242
E + L EAG ++ + + E + AAI L + I + + V
Sbjct: 219 EETAKQLSEAGID-FVHLSMSAANEELYDSIIGYKGNLPKVKAAIKALKDNNIYIRLKVV 277
Query: 243 LL 244
L+
Sbjct: 278 LM 279
>gi|148262099|ref|YP_001228805.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146395599|gb|ABQ24232.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 357
Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 42/221 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P I + C + C C EM S+ ++++ + L I + S+ V+ +GG
Sbjct: 7 PKWIAWETTQKCNLKCVHCRCSSEMTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208
+PL+ L +L R+ + + E+ + +KEA +
Sbjct: 64 EPLMRKDIFELAGYGTSL-----------GLRMCMASNGALVTDEVCEKMKEADIKMVSL 112
Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
A+H N P F AA G L S K + +AN +
Sbjct: 113 SLDGSTAAVHDNFRQCPGSFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQADIANTFK 168
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G++I++ L K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMSELISK 199
>gi|225850334|ref|YP_002730568.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
EX-H1]
gi|225645594|gb|ACO03780.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
EX-H1]
Length = 321
Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 99 LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C +C E V +L ++ + + + + +V TGG+PL+
Sbjct: 8 VSVTDKCNLKCFYCRPDNSEFV--PHDEILRYEEIARLVKAMTKY-GLRKVRITGGEPLV 64
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+L++++K L+ I + + + + + L++AG
Sbjct: 65 --RPQLEELVKMLKDIPQINDISLTTNAIT------LSKHAEKLRKAGL 105
>gi|154706007|ref|YP_001424838.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
burnetii Dugway 5J108-111]
gi|229890504|sp|A9KCP2|MIAB_COXBN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|154355293|gb|ABS76755.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii Dugway
5J108-111]
Length = 439
Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153
+ ++ C YC FC V S+ + +A + + + E+ G +
Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202
Query: 154 ---PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
++ + L ++ L + +++ +RF + P + LI E K +
Sbjct: 203 NDYCGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257
Query: 208 YIAIH 212
+H
Sbjct: 258 ANHLH 262
>gi|154501155|ref|ZP_02039193.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
29799]
gi|150269847|gb|EDM97382.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
29799]
Length = 434
Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 24/160 (15%)
Query: 64 KEELNILPEEREDPIGDN---NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+ E ++PE D I + P G+ R R +LK+ C +C +C G
Sbjct: 115 RAEAELVPEMLVDNIMTHRSFEQLPAGGLEGR--TRAMLKVEDGCVNFCTYCIIPYARGP 172
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-------LQKVLKTLRYIK 173
+ LS E A + + E++ TG + I S L +++ + +
Sbjct: 173 VRSLALS-AAVEQAKK-LAQD-GYREIVLTGIE--ISSWGHEFKDGTSLIDLVEGICHAV 227
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+R S ++P+ I + + + H
Sbjct: 228 PDLRVRLGS----LEPRTITEDFCRRAAALPN---LCPHF 260
>gi|152974529|ref|YP_001374046.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023281|gb|ABS21051.1| Coproporphyrinogen dehydrogenase [Bacillus cytotoxicus NVH 391-98]
Length = 495
Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAY 137
S + + + + + CP C +C F + ++G+V S + A+
Sbjct: 159 SVIPDLYRLKEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEIREIGAF 218
Query: 138 IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPE 195
++EK ++ + + GG P ++ + + + + + +V+ +R + V P I PE
Sbjct: 219 LKEKGIKVTTIYYGGGTPTSITAEEMDMLYEQMYESFPNVENVREVT-VEAGRPDTITPE 277
Query: 196 LIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
++ L + + I P + +E + AI R
Sbjct: 278 KLEVLNKWNIDRISIN-----PQSYHQETLKAIGR 307
>gi|304373805|ref|YP_003858550.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage
RB16]
gi|299829761|gb|ADJ55554.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage
RB16]
Length = 163
Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R++L + C C C+ R + GT + ++TE L + + + TGGDP
Sbjct: 18 RVVLFVTG-CNHKCEGCYNRSTWNPRNGTPYT-EETENELIKLLSNPHVDGLTLTGGDPF 75
Query: 156 ILSHK-RLQKVLKTLRY 171
++ +L K+L+ +R
Sbjct: 76 YRTNHPKLLKLLQRVRA 92
>gi|205351955|ref|YP_002225756.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856135|ref|YP_002242786.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|229890644|sp|B5QWC1|MIAB_SALEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890645|sp|B5R817|MIAB_SALG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|205271736|emb|CAR36570.1| MiaB protein (putative tRNA-thiotransferase (or
tRNA-methylthiotransferase)) [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206707938|emb|CAR32227.1| MiaB protein (putative tRNA-thiotransferase (or
tRNA-methylthiotransferase)) [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326626994|gb|EGE33337.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 474
Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC +C G + S D +A + + + EV G +
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
+ +L+ + I + +RF + P I++ R PEL+ L
Sbjct: 205 AWRGENYDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
++G + H + E A I +L A + S + G NDD
Sbjct: 265 PVQSGSDRVLNLMGRTHT------ALEYKAIIRKLRAARPDIQISSDFIVGFPGETNDDF 318
Query: 252 EILANL 257
E L
Sbjct: 319 EKTMKL 324
>gi|150002891|ref|YP_001297635.1| involved moaA/nifB/pqqE family protein, involved in molybdenum
cofactor biosynthesis [Bacteroides vulgatus ATCC 8482]
gi|319642417|ref|ZP_07997069.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A]
gi|149931315|gb|ABR38013.1| involved moaA/nifB/pqqE family protein, involved in molybdenum
cofactor biosynthesis [Bacteroides vulgatus ATCC 8482]
gi|317385947|gb|EFV66874.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A]
Length = 498
Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
L + C +C++C + S T+ + I+E Q+ +V GG+ +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200
Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
++ +LK L R I +++P+ +L+Q ++E G V I++
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249
Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
A H + E + + L ++G+ SVL N +LA L+
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 308
Query: 262 -----VELRIKP 268
+ RI P
Sbjct: 309 HLKHIRDWRIIP 320
>gi|212712166|ref|ZP_03320294.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
30120]
gi|212685213|gb|EEB44741.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
30120]
Length = 326
Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C S + L+ + E +V TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAFAE-LGTEKVRITGGEPTMRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ ++ ++ + + R+ ++ ++AG + + + P
Sbjct: 76 D--FTDIIAAIKENDSIKKI-----AVTTNGYRMARDVQAW-RDAGLN-AVNVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249
+F+ + + I +AG + +VL+K +ND
Sbjct: 127 RQFAAITGQDKFFQVMKGIDAAFDAGFDKVKVNAVLMKNVND 168
>gi|186680946|ref|YP_001864142.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme
PCC 73102]
gi|186463398|gb|ACC79199.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme
PCC 73102]
Length = 483
Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 61/222 (27%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MV 118
E + P ED H Y R+ + + C + C +C R+
Sbjct: 43 ERIAKHPCYSEDA------------HHHYA-RMHVAVAPACNIQCNYCNRKYDCANESRP 89
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK----------------- 160
G + + AL + Q+ V G GDPL K
Sbjct: 90 GVVSELLTPEEAAHKALVIGGKIPQMTVVGIAGPGDPLANPEKTFRTFELIAAQAPDIKL 149
Query: 161 -------RLQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVY 208
L + ++ I HV + + +VDP+ +I P + ++ + +
Sbjct: 150 CLSTNGLMLPDYIDRIKQLNIDHV-TITIN----MVDPEIGAKIYP-WVHYRRKRYRGLE 203
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H + + L +A I+ SV++ GIND
Sbjct: 204 -GAKILHERQM-----EGLQALKDADILCKVNSVMIPGINDH 239
>gi|307331899|ref|ZP_07610996.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113]
gi|306882464|gb|EFN13553.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113]
Length = 386
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 96 RILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-----EV 147
+LK+ + C + C +C+ ++ +S + A I E + V
Sbjct: 12 TFILKVANRCNIDCDYCYVFNSKDQSSRHLPARMSLEVARATAQRIGEHAAANGMREVHV 71
Query: 148 IFTGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ GG+PL+ + + +L T L I +RF + + + + G
Sbjct: 72 VLHGGEPLLAGPQHMAGLLSTVLEAIPPTTDVRFELQTNGTL---LTEAWLNLFERYGVA 128
Query: 207 VYIAI 211
V I++
Sbjct: 129 VGISL 133
>gi|298373288|ref|ZP_06983277.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274
str. F0058]
gi|298274340|gb|EFI15892.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274
str. F0058]
Length = 72
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ ++ G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVQLQNGHEII----AHISGKMRMHYIRILPGDKVKVEMSPYDLSK---GRISFR 70
>gi|257066928|ref|YP_003153184.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii
DSM 20548]
gi|256798808|gb|ACV29463.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii
DSM 20548]
Length = 312
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 35/169 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY--IQEKSQIWEVIFTGGD 153
+ + C C++C G +L +D E + I I ++ TGG+
Sbjct: 14 ISVTDRCNFRCKYCM-----GEDGIKLLRHEDILTFEEIVETAQIMAGLGIRKIRLTGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------- 204
P + + + ++K L I ++ L + +V + ++ LKE G
Sbjct: 69 PF--ARRGVMDLIKKLSQIPEIEDLAITTNGSMVY------DKLESLKEYGISRINFSLD 120
Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ + A+ E AI + + VL+KG ND
Sbjct: 121 TLDREKFKLITGADLLEEVKRTIFKAIELDFKVKVNI----VLIKGFND 165
>gi|255322795|ref|ZP_05363937.1| radical SAM domain protein [Campylobacter showae RM3277]
gi|255300137|gb|EET79412.1| radical SAM domain protein [Campylobacter showae RM3277]
Length = 275
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 36/184 (19%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148
R+ L + C + C FC R ++ ++ + + A Y++ + I +
Sbjct: 24 GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83
Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191
G GDP+ + K L L +HV I+R V
Sbjct: 84 IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143
Query: 192 INPELIQCLKEAGKPVYIAIHANH-------PYEFSEEAIAAISRLANAGIILLSQSVLL 244
+ P++ GK H N E I +L A +I+ +V++
Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYRGEDGARILGERQEEGIRKLKEARMIVKINTVVI 197
Query: 245 KGIN 248
G+N
Sbjct: 198 PGVN 201
>gi|239813975|ref|YP_002942885.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Variovorax
paradoxus S110]
gi|239800552|gb|ACS17619.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus
S110]
Length = 454
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 24/129 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ ++ C YC +C V ++ + L I + EV G
Sbjct: 146 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVNRPLDDVLVEIAGLADQGVREVTLLGQN 200
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
GD ++ L +++ + I ++ +R+ + P P LI+ +
Sbjct: 201 VNAYRGRMGDTAEIADFAL--LIEYVAEIPGIERIRYTTSH----PNEFTPRLIEAYAKV 254
Query: 204 GKPVYIAIH 212
+ +H
Sbjct: 255 P-QLVSHLH 262
>gi|152976740|ref|YP_001376257.1| RNA modification protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025492|gb|ABS23262.1| RNA modification enzyme, MiaB family [Bacillus cytotoxicus NVH
391-98]
Length = 450
Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L +L+ + +K ++ LR S ++ +I+ E+I+ L ++ K
Sbjct: 199 TGGYGED---MKDYNLAGLLRDMEAEVKGLKRLRISS----IEASQISDEVIEVLDKS-K 250
Query: 206 PVYIAIHA 213
V +H
Sbjct: 251 VVVRHLHI 258
>gi|294674416|ref|YP_003575032.1| Fe-S oxidoreductase [Prevotella ruminicola 23]
gi|294471976|gb|ADE81365.1| putative Fe-S oxidoreductase [Prevotella ruminicola 23]
Length = 445
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L + C + C CF R G L + L + V F+GG+PL+
Sbjct: 107 IYLTNACNLRCEHCFMR--SGKPLDNELPKTEWLRILTEF-QHQGGKSVTFSGGEPLMNR 163
Query: 159 H 159
Sbjct: 164 D 164
>gi|239977822|ref|ZP_04700346.1| hypothetical protein SalbJ_00205 [Streptomyces albus J1074]
gi|291449746|ref|ZP_06589136.1| predicted protein [Streptomyces albus J1074]
gi|291352695|gb|EFE79597.1| predicted protein [Streptomyces albus J1074]
Length = 365
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 19/148 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L+ L CP+ C C G + D +A + + ++ TGG+PL+
Sbjct: 17 VLVTLTRRCPLSCAHCSTG--SGPDTDERPAPGDLRRLVASFTPRDRPDVMMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
+ +++ L + +R V + + H +
Sbjct: 75 MP-----GLVRELALSAKEK----GTRT-AVLSGMFFARARSVPRAVLRAAEAVDHFSAS 124
Query: 215 ----HPYEF-SEEAIAAISRLANAGIIL 237
H E AA+ L+ G +
Sbjct: 125 LDLHHEREVPRAAVFAALRALSTTGTRV 152
>gi|167747917|ref|ZP_02420044.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
gi|167652648|gb|EDR96777.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
Length = 312
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 22/182 (12%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126
E + + + +G+V+R P ++++ C C FC +E +
Sbjct: 12 ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184
D A Y + I ++ GD LI ++ L ++LK +R I + + + S
Sbjct: 72 VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128
Query: 185 PIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEF-------SE-EAIAAISRLANAGI 235
++ E ++ L+E G VY+ + + + + E I + S++ AGI
Sbjct: 129 SVMIK---TKEELRELRENGLDMVYMGLESGNAQVLKFMKKGATPDEMIQSASKIKQAGI 185
Query: 236 IL 237
L
Sbjct: 186 RL 187
>gi|45658385|ref|YP_002471.1| hypothetical protein LIC12543 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|81567903|sp|Q72PC8|RIMO_LEPIC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|45601628|gb|AAS71108.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 437
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
I R+ P EL+ E D + + S ++ Y +K+ C C FC
Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165
Query: 114 RREMVGSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLK 167
G + L +DT A+ +I + ++ G D + L +++
Sbjct: 166 IPSFRGKFAESPLDDILRDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDMVR 218
Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ I ++ILR + P + +LI+ + E K
Sbjct: 219 KVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252
>gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
Length = 458
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 40/233 (17%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---K 141
P + D + L + H C + C++CF + + +V+S A+AY+ E
Sbjct: 72 PSACCEKQKQDMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPD 129
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINP 194
S+ + + F GG+PL+ ++ ++ + I +I+ SR + + I+
Sbjct: 130 SERYTIYFFGGEPLLH-----KQFVRDVVEIAKEEII---SRRNKDVCFLLNTNGTLIDD 181
Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEF-------SEEAIAAISRLANAGIILLSQSVL 243
+++ + V ++I N + I RL G+ + L
Sbjct: 182 DMMNFFVQEKFTVTVSIDGPQKMNDANRVFLNGRGSFRRIVENIERLKKRGVN-FN---L 237
Query: 244 LKGINDDPEILANLMRTFVELRIKPY-YLHHPD---LAAGTSHFRLTIEEGQK 292
I+ L R F + + PY Y D T+HF +
Sbjct: 238 RATISPKNTRLLETFRFFESMEV-PYSYAFTIDSDVKDRSTTHFDTNGIKAID 289
>gi|313499923|gb|ADR61289.1| Molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida BIRD-1]
Length = 322
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+
Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIK 173
RL L + +
Sbjct: 73 SP--RLDAFLAAVAKLD 87
>gi|282163323|ref|YP_003355708.1| probable molybdenum cofactor biosynthesis protein A [Methanocella
paludicola SANAE]
gi|282155637|dbj|BAI60725.1| probable molybdenum cofactor biosynthesis protein A [Methanocella
paludicola SANAE]
Length = 312
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 87 KGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKS 142
+ +V Y R+ + L + C + C +C G G ++ + + I K
Sbjct: 3 ESLVDNYGRRVTSLRMSLTNRCNLQCIYC---HNEGESGSGGEITVDEIARLVR-IATKY 58
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ V F+GG+PL+ + L+ +L+ L ++ + + ++ P+ + LKE
Sbjct: 59 GVDRVKFSGGEPLLRTD--LEDILRAL---PPLKDISLTTNGTLLAPR------AKGLKE 107
Query: 203 AGK-PVYIAIHANHPYEFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDD 250
AG V I++ F I+ +AG+ + V LKGIN+D
Sbjct: 108 AGLDRVNISLDTMDSGRFDLITQRKGQFSRVMDGINAAIDAGLTPVKLNMVYLKGINED 166
>gi|237748413|ref|ZP_04578893.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
OXCC13]
gi|229379775|gb|EEO29866.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
OXCC13]
Length = 372
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 55 PIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
PI RQ P E+ + PE P+ D PLK + + + C C
Sbjct: 9 PILRQENP---EMPVRPEIILPAMSIPVLDRLERPLKDLR--------ISVTDRCNFRCV 57
Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+C +++ G +LS ++ + + ++ TGG+PL+ K ++++
Sbjct: 58 YCMPKQVFGKDFRFIPHSDMLSFEEIARLARLFVAR-GVEKIRLTGGEPLL--RKNVERL 114
Query: 166 LKTLRYIK 173
++ L +K
Sbjct: 115 IEQLSRLK 122
>gi|257066655|ref|YP_003152911.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
20548]
gi|256798535|gb|ACV29190.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
20548]
Length = 431
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 16/118 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +YC +C G+ + K+ + ++ E++ TG
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKKEAKRL-----AQNGYKEIVLTGI 196
Query: 153 DPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L V++ + ++ +R S ++P+ I + ++ +K K
Sbjct: 197 HVASYGKDLRNGTSLIDVIEEVSKTDGIERIRLSS----MEPRHITRDFLERMKATEK 250
>gi|126172537|ref|YP_001048686.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS155]
gi|152998830|ref|YP_001364511.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS185]
gi|217971490|ref|YP_002356241.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS223]
gi|125995742|gb|ABN59817.1| GTP cyclohydrolase subunit MoaA [Shewanella baltica OS155]
gi|151363448|gb|ABS06448.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS185]
gi|217496625|gb|ACK44818.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
OS223]
Length = 337
Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C K LS + ++ + ++ TGG+P +
Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIANLVSAFSQ-VGTQKIRITGGEPTLRK 86
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + R H+ + R+ + + + +++ + P
Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179
>gi|317124847|ref|YP_004098959.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
gi|315588935|gb|ADU48232.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
Length = 350
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 36/170 (21%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + + +LS ++ + + +V TGG+PL+
Sbjct: 37 VSVTDRCNLRCTYCMPAEGLPWMPQAEMLSDEEMLRLIGLFVRD-GVTQVRLTGGEPLL- 94
Query: 158 SHKRLQKVLKTLRYIKHVQIL----------RFHSRV-------PIVDPQRINPELIQCL 200
+ L ++ + ++ + R R+ V I+ E L
Sbjct: 95 -RRSLVDLVAGIASLEPRPRIAMTTNGVGLDRIAHRLAAAGLDRVNVSLDTIDSETFTRL 153
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + + A+AG+ + +V ++G+ND
Sbjct: 154 TRRDR--------------LPDVELGLKAAADAGLTPVKVNAVAMRGVND 189
>gi|197119727|ref|YP_002140154.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197089087|gb|ACH40358.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
DUF3463-containing protein [Geobacter bemidjiensis Bem]
Length = 332
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 29/188 (15%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +YP ++L+ H+C + C C R ++S + L + E V
Sbjct: 23 IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78
Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGG+P + + ++++ L KH+ + +++ + +K +
Sbjct: 79 TGGEPFLYP--HIFQLIEKVLERGKHIY---LCTNALLLEKA------LDSMKPHP-NLV 126
Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
I +H H E A+S + A G L + + + K D + L
Sbjct: 127 INVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFK--ETDLIEIEMLF 184
Query: 259 RTFVELRI 266
++ +
Sbjct: 185 SHLKDIGV 192
>gi|330909553|gb|EGH38067.1| radical SAM family protein HutW [Escherichia coli AA86]
Length = 419
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
+R++ + C +C FC F + + ++ E A + + + I V
Sbjct: 30 RNRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|298290897|ref|YP_003692836.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
gi|296927408|gb|ADH88217.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
506]
Length = 348
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + + ++ TGG+PL+
Sbjct: 33 VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ L + L + ++ + + S++ R EL C K + +++
Sbjct: 92 DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142
Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
P F A I AGI + +V L+G N+D
Sbjct: 143 LDPQRFRALTRWGDLSKVLAGIDAAQAAGIHVKLNAVALRGENED 187
>gi|158604990|gb|EAT98763.2| asparate kinase, monofunctional class [Campylobacter concisus
13826]
Length = 400
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
IFT D + + R++K K L I + ++L S V R ++ K+ +
Sbjct: 171 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 226
Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
NH E + A + + +GI L +Q+ V L+G+ D P I A +
Sbjct: 227 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 285
Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
I + D+ H F + E + +K+S
Sbjct: 286 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 324
>gi|157163983|ref|YP_001467151.1| aspartate kinase [Campylobacter concisus 13826]
Length = 399
Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
IFT D + + R++K K L I + ++L S V R ++ K+ +
Sbjct: 170 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225
Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
NH E + A + + +GI L +Q+ V L+G+ D P I A +
Sbjct: 226 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 284
Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
I + D+ H F + E + +K+S
Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 323
>gi|254884451|ref|ZP_05257161.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA]
gi|254837244|gb|EET17553.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA]
Length = 503
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
L + C +C++C + S T+ + I+E Q+ +V GG+ +
Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205
Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
++ +LK L R I +++P+ +L+Q ++E G V I++
Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254
Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
A H + E + + L ++G+ SVL N +LA L+
Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313
Query: 262 -----VELRIKP 268
+ RI P
Sbjct: 314 HLKHIRDWRIIP 325
>gi|169829242|ref|YP_001699400.1| hypothetical protein Bsph_3790 [Lysinibacillus sphaericus C3-41]
gi|168993730|gb|ACA41270.1| UPF0004 protein [Lysinibacillus sphaericus C3-41]
Length = 432
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 13/125 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
R LK+ C +C FC G + + + Y++
Sbjct: 130 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 189
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L L ++L+ L + ++ LR S ++ ++ E+I L+E+ K V
Sbjct: 190 YGQD---LKDYNLAQLLRDLEANVTGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 241
Query: 209 IAIHA 213
+H
Sbjct: 242 NHLHI 246
>gi|331655124|ref|ZP_08356123.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli M718]
gi|331047139|gb|EGI19217.1| putative oxygen independent coproporphyrinogen III oxidase
[Escherichia coli M718]
Length = 445
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
LTP A ++ P D R +P + + + E+ + SP
Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56
Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
R++ + C +C FC F + + ++ E A + + + + I V F
Sbjct: 57 KRLVYLHIPFCATHCTFCGFYQNRFDEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116
Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193
GG P LS L +++ TLR + + RV D +RI+
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163
>gi|295109586|emb|CBL23539.1| MiaB-like tRNA modifying enzyme [Ruminococcus obeum A2-162]
Length = 438
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 27/130 (20%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C + +G V S K D + + EV+ TG
Sbjct: 145 RAYIKVQDGCNQFCTYCI----IPFARGRVRSRKIADVLREVETLAS-KGYKEVVLTGI- 198
Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LS + L +++ + + +Q +R S ++P+ I E ++ +
Sbjct: 199 --HLSSYGVDFPKEERESLLSLIQAVSKVAGIQRIRLGS----LEPRIITEEFLEGIVAT 252
Query: 204 GKPVYIAIHA 213
GK + H
Sbjct: 253 GK---VCPHF 259
>gi|288553123|ref|YP_003425058.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
OF4]
gi|288544283|gb|ADC48166.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
OF4]
Length = 307
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
K +LS ++ + S I ++ TGG+PL+ + +++ LR + +
Sbjct: 15 KDELLSFEEITRLTTLFTKASSIEKLRITGGEPLMRKD--VDQLIDQLRRATKIDDIAMT 72
Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAI-HANHPY--EFSE------EAIAAISRLA 231
+ + P++ LKEAG K V +++ N E + + + + A
Sbjct: 73 TNGV------MLPKMASRLKEAGLKRVTVSLDSLNDKRFGEINGRGIGVDQVLKGMDAAA 126
Query: 232 NAGIILLSQSVLLKGINDD 250
AG+ + V+ KG+ND
Sbjct: 127 EAGLGVKVNMVVQKGVNDH 145
>gi|187779327|ref|ZP_02995800.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC
15579]
gi|187772952|gb|EDU36754.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC
15579]
Length = 740
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 20/90 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-----FTGGD 153
+ C + C++C++ G + ++K + YI + +I+ F GG+
Sbjct: 44 FIVTEGCNLRCKYCYQVHKNGENRMDFATAK---KIVDYILDNREIFSAPGVVWDFIGGE 100
Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHS 182
PL+ + + + +R +
Sbjct: 101 PLL-----------EIELMDQITDYIRLQT 119
>gi|189424840|ref|YP_001952017.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Geobacter lovleyi SZ]
gi|189421099|gb|ACD95497.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Geobacter lovleyi SZ]
Length = 193
Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 93 YPDRILLKLL-HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP ++ + CP C +C + ++ + + ++ + + +++++ + + V+F+
Sbjct: 15 YPGKLAAVVFCQGCPWRCSYCHNQHLLDAGQSGTVT---WQEIIRFLEQRRSLLDAVVFS 71
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKE 202
GG+P + + + L+ I+ + L H+ P PQR L CL +
Sbjct: 72 GGEPTMQPT-----LPEALQAIRRMGFLTGLHTGGP--YPQR----LAACLSQ 113
>gi|317008935|gb|ADU79515.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori
India7]
Length = 418
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 14/96 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C C +C R ++ +L D + + EV+
Sbjct: 133 KTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVD-------LLCSKGVQEVVL 185
Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
TG + R + +++K L I ++ +R S
Sbjct: 186 TGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|313892993|ref|ZP_07826570.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442346|gb|EFR60761.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
oral taxon 158 str. F0412]
Length = 482
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+G DPL L+ +L++++ I ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174
>gi|294778166|ref|ZP_06743597.1| radical SAM domain protein [Bacteroides vulgatus PC510]
gi|294448025|gb|EFG16594.1| radical SAM domain protein [Bacteroides vulgatus PC510]
Length = 503
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
L + C +C++C + S T+ + I+E Q+ +V GG+ +
Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205
Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
++ +LK L R I +++P+ +L+Q ++E G V I++
Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254
Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
A H + E + + L ++G+ SVL N +LA L+
Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313
Query: 262 -----VELRIKP 268
+ RI P
Sbjct: 314 HLKHIRDWRIIP 325
>gi|282877988|ref|ZP_06286797.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
gi|281299989|gb|EFA92349.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
Length = 453
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C + + A + E++ TG +
Sbjct: 161 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPSIASLVQQAEQ--AAEEGGKEIVLTGVN 217
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + ++K L ++ ++ R S ++P + ELI ++
Sbjct: 218 IGEFGERTDETFLDLVKALDQVEGIRRFRISS----LEPDLMADELIDYCAQSR---AFM 270
Query: 211 IHA 213
H
Sbjct: 271 PHF 273
>gi|253997231|ref|YP_003049295.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis
JLW8]
gi|253983910|gb|ACT48768.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis
JLW8]
Length = 442
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
H P R+ L ++ C YC FC G + + TEA + +
Sbjct: 140 HLPPPRVEGVSAFLSIMEGCSKYCSFCVVPYTRGEEVSRPFADILTEAVQ---LAEQGVK 196
Query: 146 EVIFTGGDPLILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
E+ G + + L +++T+ I ++ +RF + P +R+
Sbjct: 197 EITLLGQNVNAYRTEYDGVESDLAMLIETIAEIPQIERIRFTTSHPNEMNERL 249
>gi|302874950|ref|YP_003843583.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307690432|ref|ZP_07632878.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|302577807|gb|ADL51819.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 454
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149
Y + L ++H C + C++CF E +S + AL Y+ ++S EV
Sbjct: 93 YVKALCLNIIHDCNLRCKYCFADEGEYHGHKGKMSIDTAKKALEYVIKRSGPRKNIEVDL 152
Query: 150 TGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GG+PL+ K + + K L H + +RF + + PE++ L + +
Sbjct: 153 FGGEPLMAMDVIKEVVQYGKELGE-NHKKNIRF---TMTTNSTLLTPEVVDFLDKEMGNI 208
Query: 208 YIAI 211
++I
Sbjct: 209 ILSI 212
>gi|257062911|ref|YP_003142583.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
20476]
gi|256790564|gb|ACV21234.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
20476]
Length = 333
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 24/180 (13%)
Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
R++ + L C + CR+C E V + +LS ++ E + + I +
Sbjct: 5 HGRVIDYLRISLTDRCNLRCRYCMPEEGVSALSHEDILSLEEIERIIR-VAAGMGISRLR 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--- 205
TGG+PL+ K + ++K ++ + + + P++ LKEAG
Sbjct: 64 LTGGEPLV--RKGIAGLIKEAMRTPGIESVALTTNGI------LLPKMAAELKEAGLSRV 115
Query: 206 PVYIAI------HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
+ + H + +A I AG + +V+++ +N D A +
Sbjct: 116 NISLDTLDEEQFHYITRRGHVADVMAGIDAALEAGFNPVKINAVVVRSLNQDLYEFARMS 175
>gi|167757698|ref|ZP_02429825.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
gi|167664580|gb|EDS08710.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
Length = 427
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 29/131 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + +V+ ++ E ++ EV+
Sbjct: 141 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSRSHDSVI--REVEEL-----ARNGYKEVVL 193
Query: 150 TGGDPLILS-------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG LS L +L + I+ ++ +R S ++P+ I E + +
Sbjct: 194 TGI---HLSSYGVDTGDDLLSLILS-IHEIEGIRRIRLGS----LEPRIITEEFAKTIAG 245
Query: 203 AGKPVYIAIHA 213
K + H
Sbjct: 246 LPK---MCPHF 253
>gi|114617065|ref|XP_001150394.1| PREDICTED: leucine zipper protein 5 isoform 8 [Pan troglodytes]
Length = 1096
Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ + L+ G ++IH H F E +S L +
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 908 RSLGIMQTVKG 918
>gi|330836389|ref|YP_004411030.1| Radical SAM domain-containing protein [Spirochaeta coccoides DSM
17374]
gi|329748292|gb|AEC01648.1| Radical SAM domain protein [Spirochaeta coccoides DSM 17374]
Length = 310
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP + + + C + C+ C + T LS KD + + Y+++ +I E+ GG
Sbjct: 8 YPQKFNVLITSKCNLRCKHC-----YLDPRQTELSVKDFSSIIDYLKK-IKIKELCIEGG 61
Query: 153 DPL 155
+PL
Sbjct: 62 EPL 64
>gi|317054889|ref|YP_004103356.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
gi|315447158|gb|ADU20722.1| Radical SAM domain protein [Ruminococcus albus 7]
Length = 334
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151
++ + C + C +C+ M + K ++ + +AA+ + + + V F G
Sbjct: 3 VVFWTTNDCNLNCSYCY-NRMSNNIKKEYMTREVADAAIDMLTKLDCWKTADEIAVQFHG 61
Query: 152 GDPLILSHKRLQKVLKTLRYI 172
G+PL ++ ++ +++ +
Sbjct: 62 GEPL-MNCDIIEYIMERFEAL 81
>gi|152985383|ref|YP_001347577.1| hypothetical protein PSPA7_2205 [Pseudomonas aeruginosa PA7]
gi|150960541|gb|ABR82566.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 298
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC EM + + + E L I+ + + V G
Sbjct: 24 LILPVTNGCSWNRCGFC---EMYTQPQKKFRARDEAE-VLEEIRRCGERLIVKRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL VL+ +R + V+ +
Sbjct: 80 DALVLPTRRLLVVLEAIRRHLPEVERV 106
>gi|312135098|ref|YP_004002436.1| RNA modification enzyme, miab family [Caldicellulosiruptor
owensensis OL]
gi|311775149|gb|ADQ04636.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
owensensis OL]
Length = 434
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G+ + L + E + + E + TG +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197
Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L V++ + I+ V+ +R S P++ ++ L+ + ++
Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256
Query: 209 IAIH 212
+++
Sbjct: 257 LSLQ 260
>gi|302871917|ref|YP_003840553.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
obsidiansis OB47]
gi|302574776|gb|ADL42567.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
obsidiansis OB47]
Length = 433
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G+ + L + E + + E + TG +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197
Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L V++ + I+ V+ +R S P++ ++ L+ + ++
Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256
Query: 209 IAIH 212
+++
Sbjct: 257 LSLQ 260
>gi|303229415|ref|ZP_07316205.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-134-V-Col7a]
gi|302515951|gb|EFL57903.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-134-V-Col7a]
Length = 472
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+G DPL L +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164
>gi|206602846|gb|EDZ39327.1| Putative oxygen-independent coproporphyrinogen III oxidase
[Leptospirillum sp. Group II '5-way CG']
Length = 389
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 30/123 (24%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-------------KS 142
R L + CP C +C ++ S TE A AY++ S
Sbjct: 12 RTLYVQVPFCPERCHYC-----------SLPVSLQTERAPAYLRALFREKKRLMEREDLS 60
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ + GG P +L LQ++L+ L+ + + + SR P + PE++ L+
Sbjct: 61 GLETLYVGGGTPTVLPLPHLQELLEELQKGLPPLAEITVESR-----PDTVTPEILHRLR 115
Query: 202 EAG 204
+G
Sbjct: 116 SSG 118
>gi|159044234|ref|YP_001533028.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
gi|157911994|gb|ABV93427.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
Length = 314
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 20/158 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
P + +C + C C+ + + +++ + L +++++ + E+ FTGG
Sbjct: 31 PQTLWFNTGTLCNIECANCYIESSPTNDRLVYITAAEVTDYLDQLEDRNWGVREIAFTGG 90
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209
+P ++ + ++ L V IL + P + L++ G + +
Sbjct: 91 EPF-MNPEMIEMTEAALARGYEVLIL-----TNAMLPMMRKTMREGLLRLHAAYGDKLTL 144
Query: 210 AIHANHPYE-FSEE---------AIAAISRLANAGIIL 237
I +H E +E + ++ L + GI +
Sbjct: 145 RISVDHWSEKLHDEERGKGSFAKTLQGMAWLRDNGIRM 182
>gi|107102506|ref|ZP_01366424.1| hypothetical protein PaerPA_01003569 [Pseudomonas aeruginosa PACS2]
Length = 298
Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC + +Q ++D L I+ + + V G
Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL VL+ +R + V+ +
Sbjct: 80 DALVLPTRRLLAVLQAIRQHLPEVERV 106
>gi|296185249|ref|ZP_06853659.1| radical SAM domain protein [Clostridium carboxidivorans P7]
gi|296050083|gb|EFG89507.1| radical SAM domain protein [Clostridium carboxidivorans P7]
Length = 328
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G + L+++ + + I + + +IF+GG+PL+
Sbjct: 4 VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60
Query: 157 LSH-KRLQKVLKTLRYIK 173
L + L I
Sbjct: 61 RKDIFELIQYASDLGVIP 78
>gi|288925693|ref|ZP_06419625.1| translation initiation factor IF-1 [Prevotella buccae D17]
gi|294674749|ref|YP_003575365.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
gi|315606482|ref|ZP_07881497.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
gi|317503958|ref|ZP_07961966.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
gi|288337631|gb|EFC75985.1| translation initiation factor IF-1 [Prevotella buccae D17]
gi|294473082|gb|ADE82471.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
gi|315251888|gb|EFU31862.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
gi|315664984|gb|EFV04643.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
Length = 72
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|257452357|ref|ZP_05617656.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
gi|257465851|ref|ZP_05630162.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917008|ref|ZP_07913248.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317058900|ref|ZP_07923385.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
gi|313684576|gb|EFS21411.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
gi|313690883|gb|EFS27718.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 222
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C + C +C + + K + + E L+ + ++ +I + TGG+PL+
Sbjct: 24 ALFIRFQYCNLNCSYCDTKW--ANSKNSPFTWMSLEEILS-LAKEKRIKNITLTGGEPLL 80
Query: 157 LSHKRLQKVLKTLRY 171
+ ++ +L+
Sbjct: 81 QTD--IRSLLEAFSK 93
>gi|255524292|ref|ZP_05391250.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
gi|255511975|gb|EET88257.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
Length = 328
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C +YC C+R G + L+++ + + I + + +IF+GG+PL+
Sbjct: 4 VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60
Query: 157 LSH-KRLQKVLKTLRYIK 173
L + L I
Sbjct: 61 RKDIFELIQYASDLGVIP 78
>gi|257791825|ref|YP_003182431.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
gi|257475722|gb|ACV56042.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
Length = 333
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 43/213 (20%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C++ LS+ + + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDRELSTDEGKKMIDEIAR-AGFKVMIFSGGEPLM 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
+ +++ R R P+ I PE+ LKEAG + I +
Sbjct: 60 RPD--IYELVAHAA--------RAGLR-PVFGSNGTLITPEVALRLKEAG-ACAMGISVD 107
Query: 215 ------HPY----EFSEEAIAA-ISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262
H E + + A I AG+ Q L + D + + + + V
Sbjct: 108 SLDAAKHDRFRGLERAYDLTMAGIEACKQAGLPF--Q--LHTTVVDWNRDEVCAITDFAV 163
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
E+ +Y+ F + + G+ I
Sbjct: 164 EIGAMAHYVF----------FLIPVGRGKFIQE 186
>gi|269798345|ref|YP_003312245.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
2008]
gi|269094974|gb|ACZ24965.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
2008]
Length = 321
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMKILGAF-HHIGVKAVRLTGGEPLL 70
Query: 157 LSHKRLQKVLKTLRY 171
++++L ++
Sbjct: 71 YP--HIEELLSRIKE 83
>gi|160903203|ref|YP_001568784.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
gi|160360847|gb|ABX32461.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
Length = 448
Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAY-IQEKSQIWEVI 148
Y ++L CP +C +C + K + + + Y ++++ + +++
Sbjct: 208 YLTYVVLVSSVGCPFHCTYC------VTPKMWKFQYRSIDKIINNIEYVLKKRPYVKDIV 261
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPV 207
F D +L K ++++LK L +R+H +P R++ E+ LK+A
Sbjct: 262 FF-DDAFLLR-KDIKELLKYLSKFD----VRYH--LPNGIHARRVDDEIALLLKKANFKT 313
Query: 208 Y--------IAIHANHPYEFS-EEAIAAISRLANAGIIL 237
I ++ + + + A++ L NAG +
Sbjct: 314 IKLGYESYDFNIQKGTGFKVTNNDLVKAVTCLKNAGFDM 352
>gi|325958472|ref|YP_004289938.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325329904|gb|ADZ08966.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 515
Score = 39.3 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 21/135 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL++ C CRFC + ++ L K+ +K+ + +V G +
Sbjct: 209 LLEVSRGCTRGCRFCMAGCIFRPRREMPL--KELLKIAEEGCQKTGLKKVALIGA--AVS 264
Query: 158 SHKRLQKVLKTLRYIK-HVQI--LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ +++++ L + V LR S I L++ LK +G
Sbjct: 265 DYSKIEELCAGLHEMGLQVTTPSLRIES---------ITENLLEILKASGLKTITI---- 311
Query: 215 HPYEFSEEAIAAISR 229
E + E A ++
Sbjct: 312 -APESTWEVRKAANK 325
>gi|160880587|ref|YP_001559555.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
ISDg]
gi|238065326|sp|A9KLS2|RIMO_CLOPH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|160429253|gb|ABX42816.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
ISDg]
Length = 440
Score = 39.3 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA----------LAYIQEKSQIWEVI 148
LK+ C +C +C ++ G + +V + E A L I +++ ++ V
Sbjct: 148 LKIAEGCDKHCTYCIIPKIRGDYR-SVPMERLVEEAKFLSEGGVKELILIAQETTVYGVD 206
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G K L ++L+ L I ++ +R P+ IN ELI LK
Sbjct: 207 LYGK-------KMLPELLRKLCAIDGIEWIRIQ----YCYPEEINDELIDVLKS 249
>gi|325478525|gb|EGC81637.1| tRNA methylthiotransferase YqeV [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 431
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 18/119 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
R +K+ C +YC +C G+ + + + + E E++ T
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNI--SSRDMESIKNEAKRLAEN-GYKEIVLTGIHV 198
Query: 151 ---GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L + L V++ + ++ +R S ++P+ I E ++ +K K
Sbjct: 199 SSYGKD---LKNGTSLIDVIEEVANTDGIERIRLSS----MEPRHITREFLERMKATKK 250
>gi|261414864|ref|YP_003248547.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261371320|gb|ACX74065.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326764|gb|ADL25965.1| tRNA-i(6)A37 modification enzyme MiaB [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 440
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 17/123 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGG-- 152
+ + C C +C + G +K +D + L + I EV+ G
Sbjct: 151 AFVAIQRGCNKRCSYCIVPYLRGPEKY-----RDMDDVLTEVKRAADKGITEVMLLGQTV 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ + +L + I ++ +RF S P P+ ELI L K H
Sbjct: 206 NAYKTPNADFTTLLTKVSEIGGIKRIRFTS--P--HPRHYTNELIDVLLNNPK----VCH 257
Query: 213 ANH 215
H
Sbjct: 258 YAH 260
>gi|148548997|ref|YP_001269099.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida F1]
gi|148513055|gb|ABQ79915.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
F1]
Length = 322
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+
Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIK 173
RL L + +
Sbjct: 73 SP--RLDAFLAAVAKLD 87
>gi|290960712|ref|YP_003491894.1| hypothetical protein SCAB_63441 [Streptomyces scabiei 87.22]
gi|260650238|emb|CBG73354.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 736
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 97 ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDT----EAALAYI--QEKSQIWEV 147
++LK+ C + C C+ + + TV++ + Y+ + + V
Sbjct: 27 LVLKIHSRCDLACDHCYVYEASDQSWRTRPTVIAEETLVQVARRLTEYVCARNLPSVT-V 85
Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAG 204
I GG+PL+ RL+++ L R + V LR H+ R+N ++ E
Sbjct: 86 ILHGGEPLLAGPARLERICAELTRALTPVTALDLRIHTNAV-----RLNENHLRIFDEFR 140
Query: 205 KPVYIAI 211
+ I++
Sbjct: 141 VKIGISL 147
>gi|222444854|ref|ZP_03607369.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii
DSM 2375]
gi|222434419|gb|EEE41584.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii
DSM 2375]
Length = 376
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
+++ C C++C+ E + + + ++++ + F GG+PL
Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + L+ L I +++ S + ++ ELI + V ++ +
Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113
Query: 216 PYEFS 220
P E +
Sbjct: 114 PEEIN 118
>gi|241662581|ref|YP_002980941.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12D]
gi|240864608|gb|ACS62269.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12D]
Length = 373
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|148643666|ref|YP_001274179.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC
35061]
gi|148552683|gb|ABQ87811.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC
35061]
Length = 376
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
+++ C C++C+ E + + + ++++ + F GG+PL
Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + L+ L I +++ S + ++ ELI + V ++ +
Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113
Query: 216 PYEFS 220
P E +
Sbjct: 114 PEEIN 118
>gi|62286584|sp|Q9X758|ANSME_KLEPN RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME;
AltName: Full=Arylsulfatase-activating protein; AltName:
Full=Ser-type sulfatase-activating enzyme
gi|4586202|emb|CAB40960.1| arylsulfatase activating protein [Klebsiella pneumoniae]
Length = 395
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 34/232 (14%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
P+ SP+ + P + C + CR+C+ + + E +
Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63
Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
YI + +I ++ GG+PL+ +K L RY + S +
Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119
Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
IN + +E G + + + N + + S + A GI LL Q V
Sbjct: 120 TLINDAWCRLFREHGFIIGLGLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179
Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
LL + N+ A + V L + Y P ++ G + + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYVRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225
>gi|23014017|ref|ZP_00053858.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Magnetospirillum
magnetotacticum MS-1]
Length = 324
Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 27/167 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C ++ + +L+ ++ + ++ TGG+PL+
Sbjct: 14 LSVTDRCDLRCVYCMAEDVTFKPRAELLTLEELGRLCEAFVR-KGVRKIRLTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYI------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
+ + ++ L + V + +++ + L AG + + +++
Sbjct: 71 RRNIMSLIDRLGALVADGRLDEVTLTTNGTQL---------AKHADGLATAGVRRINVSL 121
Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
P F+ I AG+ + +V L GIND
Sbjct: 122 DTLDPTRFTSLTRHGRLEQVMEGIFAAKAAGLAVRINTVTLPGINDH 168
>gi|298385677|ref|ZP_06995235.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
gi|298261818|gb|EFI04684.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
Length = 436
Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 71/227 (31%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEIVDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ K++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|291459250|ref|ZP_06598640.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418504|gb|EFE92223.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 461
Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + K ++S + + AL ++ E S EV F GG+PL
Sbjct: 101 LLVSHRCNLNCSYCFASQGSFCGKQGLMSFETGKRALDFLIENSGSRRNLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ + + +K++ R I +H + RF + + E+I+ V +++
Sbjct: 161 V-NFEVCRKLVSYARSIEKEHGKNFRF---TLTTNGVSVTDEVIEWANRECYNVVLSL 214
>gi|182412684|ref|YP_001817750.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
gi|177839898|gb|ACB74150.1| Radical SAM domain protein [Opitutus terrae PB90-1]
Length = 231
Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ C + C +C + + E + +Q V+ TGG+P+I
Sbjct: 22 VFVRTSGCNLRCNWC---DTPYASWNPEGKPWRIEQIVREVQSHPTARHVVLTGGEPMIA 78
Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVP 185
K + ++ L+ + H+ I + P
Sbjct: 79 --KEIAELAAQLKGLHYHITIETAATVAP 105
>gi|307243816|ref|ZP_07525947.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
gi|306492819|gb|EFM64841.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
Length = 457
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF ++ K ++ + + AL Y+ S E+ F GG+PL
Sbjct: 98 LNVAHDCNLKCKYCFAKQGDFGGKAELMPLEVGKKALDYLIANSGNRRNLEIDFFGGEPL 157
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ K L K + + + +RF + ++ E I + E V +++
Sbjct: 158 MNWPVVKELVKYGREVEK-PAGKNIRF---TITTNGVLLDDEKIDFINEHMHNVVLSL 211
>gi|116747616|ref|YP_844303.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB]
gi|116696680|gb|ABK15868.1| RNA modification enzyme, MiaB family [Syntrophobacter fumaroxidans
MPOB]
Length = 440
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 24/149 (16%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVI 148
H R LK+ C YC +C V S + L+ ++ ++ EVI
Sbjct: 142 HTGRTRAYLKVQDGCNAYCSYC-----VVPYTRGRSRSLPADEVLSRLRRFVEVGYREVI 196
Query: 149 FT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
T G D + + L +L + +R S P+ L+
Sbjct: 197 LTGIHLGQWGKD--LTPTRDLAGLLDRIGDSDSPPRVRLSSLEPLEWSA-------GLLR 247
Query: 202 EAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+I H + P ++ +AA+ R
Sbjct: 248 RISTVPWICPHFHIPLQSGDDDVLAAMHR 276
>gi|326392152|ref|ZP_08213626.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991807|gb|EGD50325.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 460
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLI 156
+ + C + C++C+ +Q+ +++ + E +I+ ++ ++F GG+PL+
Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQEEAIVTEEIAEKVADFIKLNFPKVKVIVFFGGEPLL 144
>gi|325968873|ref|YP_004245065.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708076|gb|ADY01563.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 362
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 84 SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
S + + +Y + +L +VC + CRFC + G + LS+++ +
Sbjct: 36 SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSAEEALRRVM 95
Query: 137 YIQEKSQIWEVIFTGG-DPLILSHKRLQKVLKTL-RYIKHVQI 177
I + I +V+ GG +P L + +++ K L + HV I
Sbjct: 96 AIDREFGIRQVLIQGGINP-ELDIEYYERLFKALKAKLPHVAI 137
>gi|294794006|ref|ZP_06759143.1| putative ThiH protein [Veillonella sp. 3_1_44]
gi|294455576|gb|EFG23948.1| putative ThiH protein [Veillonella sp. 3_1_44]
Length = 482
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+G DPL L+ +L++++ I ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174
>gi|302873839|ref|YP_003842472.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|307689916|ref|ZP_07632362.1| Radical SAM domain-containing protein [Clostridium cellulovorans
743B]
gi|302576696|gb|ADL50708.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
Length = 460
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 38/186 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
P + + L H C C +CF G K L++ + L I++ + I + +G
Sbjct: 118 PGEMTIILTHNCNFRCIYCF--NNSGEAKTVQLNTNEW---LEVIKQARELGIVKCTVSG 172
Query: 152 GDPLILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206
G+P++ LR I V I S ++ +++ KE G P
Sbjct: 173 GEPMLHP-----GFFDILRAITDSGMSVYICTNGS--------LVDENVVKQFKEIGLPC 219
Query: 207 VYIAIHANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILA 255
V ++ A P E + I AI L AGI + +SV+ +N D L
Sbjct: 220 VQFSLDAGTP-EIHDKMATVKGTYPKVINAIKLLVGAGIDVYIKSVITP-VNYSDISNLI 277
Query: 256 NLMRTF 261
+L
Sbjct: 278 DLCSEL 283
>gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar]
gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar]
Length = 359
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 28/155 (18%)
Query: 157 LSHKRLQKVLKTLRYIKHV-----QILR----FHSRVPIVDPQRINPELIQCLKEAGKPV 207
L+ L L LR + H + R S +V P + + ++ G +
Sbjct: 39 LTDSVLTDALNRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCI 98
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQS-------VLLKGINDDPEILANLMRT 260
E + + +A + Q V L IND + ++ R
Sbjct: 99 ----------ELLQAFFLVADDIMDASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRL 148
Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
R +PYY+H +L TS F+ + + ++
Sbjct: 149 LRRHCRAQPYYVHLLELFTETS-FQTELGQALDLM 182
>gi|154150498|ref|YP_001404116.1| radical SAM domain-containing protein [Candidatus Methanoregula
boonei 6A8]
gi|153999050|gb|ABS55473.1| Radical SAM domain protein [Methanoregula boonei 6A8]
Length = 391
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C + C C+ R S LS+ + A + + + I VIFTGG+PL+
Sbjct: 40 VFWNLTDRCNLSCTHCYSRSAPDSPTQGELSTNEALAFIDDLAA-AGIPLVIFTGGEPLV 98
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ L H + + + I E+ +K +G
Sbjct: 99 RPD------IWQLAG--HCRDKGIKT-ALSTNGTLITDEVAAKIKASG 137
>gi|119357341|ref|YP_911985.1| radical SAM protein [Chlorobium phaeobacteroides DSM 266]
gi|205829698|sp|A1BGN4|RLMN_CHLPD RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|119354690|gb|ABL65561.1| 23S rRNA m(2)A-2503 methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 363
Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 41/184 (22%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQ---EKSQIWEVIFTG-GDPLI 156
CP+ CRFC + K + + + + +I+ E ++I ++F G G+PL
Sbjct: 118 GCPLQCRFCASGQ--TGFKRNLSADEIIDQVFSLNDFIRTKHESNEITNIVFMGMGEPL- 174
Query: 157 LSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VY 208
L+ + L++ ++ L + + + + + P I L ++G +
Sbjct: 175 LNFENLKESIEVLSDQSYKFNLPQ-RKITIST--VGIIPG------INELGKSGLKTKLA 225
Query: 209 IAIHANHPYE----FSEEAIA-AISRLANAGIILLSQS------V--LLKGINDDPEILA 255
I++H + E A ++++L SQ+ V LLKGIND E
Sbjct: 226 ISLH-SASQETRESLIPVASEFSLTQLRKTLSEYTSQTGEPVTLVYMLLKGINDSVEDAR 284
Query: 256 NLMR 259
L++
Sbjct: 285 LLVK 288
>gi|282163554|ref|YP_003355939.1| hypothetical protein MCP_0884 [Methanocella paludicola SANAE]
gi|282155868|dbj|BAI60956.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 366
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 89 IVHRYP-DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWE 146
+V +YP ++I L C ++CR C+ K T S + ++ +
Sbjct: 5 VVEKYPLNQIYFYLTEGCNLHCRHCWIAPKYQDSKHTYPSLPFNLFQSIIKQARPLGLAA 64
Query: 147 VIFTGGDPLILSH-KRLQKVLKT 168
V TGG+PL+ + +++K
Sbjct: 65 VKLTGGEPLMHPDINNILELIKQ 87
>gi|257453136|ref|ZP_05618435.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
gi|317059671|ref|ZP_07924156.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
gi|313685347|gb|EFS22182.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
Length = 436
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 13/139 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
R +K+ C +C +C G + ++ + L ++ +I + G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202
Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
D + + +++ + ++ +R S V P RI I + +
Sbjct: 203 DYGKDLEGDISFETLVQEILKRDLLKRVRIGS----VYPDRITNSFISLFENP--KMMPH 256
Query: 211 IHANHPYEFSEEAIAAISR 229
+H + + + + R
Sbjct: 257 LHIS-LQSCDDTVLKNMKR 274
>gi|237736966|ref|ZP_04567447.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
gi|229420828|gb|EEO35875.1| radical SAM domain-containing protein [Fusobacterium mortiferum
ATCC 9817]
Length = 296
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
++L++ C C FC M +K + + + + + + + + + + GD
Sbjct: 19 LILQITLGCSHNKCTFC---NMYKDKKFRIKTLDEIKEEIDFFRAQIKYVRRIFLADGDA 75
Query: 155 LILSHKRLQKVLKTL-RYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVY 208
LI+ L ++L L + + + ++ PE ++ LKE G +
Sbjct: 76 LIIKTSTLLEILNYLNEKFPEKERVSIYASPKSLMLK----TPEELRTLKETGIELV 128
>gi|220907769|ref|YP_002483080.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
7425]
gi|219864380|gb|ACL44719.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
7425]
Length = 495
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 47/194 (24%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
H Y R+ + + C + C +C R+ G + + L + Q+
Sbjct: 53 HHYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111
Query: 145 WEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQI 177
+ G GDPL K L + + ++ + HV
Sbjct: 112 TVLGIAGPGDPLANPDKTFRTFELIAEKAPDIKLCLSTNGLMLPEYIDRIKQLNVDHV-T 170
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANAGI 235
+ + +VDP+ I ++ ++ K A H + ++ L A I
Sbjct: 171 ITIN----MVDPE-IGAKIYPWIRWKRKRFTGVEAARILHERQM-----ESLQALKEADI 220
Query: 236 ILLSQSVLLKGIND 249
+ SV++ GIND
Sbjct: 221 LCKVNSVMIPGIND 234
>gi|169349836|ref|ZP_02866774.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
gi|169293404|gb|EDS75537.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
Length = 428
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I R LK+ C +C +C R + K +VL+ T A Y++
Sbjct: 135 NIDRFKNTRAFLKIQDGCNNFCTYCIIPYARGRVRSRDKDSVLNQAKTLVANGYVEIVLT 194
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D L + +L L I ++ LR S ++ +I+ E+I +
Sbjct: 195 GIHTAGYGED---LDNYSFYDLLVDLVKIDGLKRLRISS----IETSQISDEIINLI--- 244
Query: 204 GKPVYIAIH 212
G I H
Sbjct: 245 GSNDIIVDH 253
>gi|78189894|ref|YP_380232.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
gi|78172093|gb|ABB29189.1| GTP cyclohydrolase subunit MoaA [Chlorobium chlorochromatii CaD3]
Length = 333
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + +LS+ + + + + I ++ FTGG+PL+
Sbjct: 24 LAVTSACNLRCGYCLSEAHEPATLHQPLLSTAELCTIIELLAKH-GIQKLRFTGGEPLLR 82
Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
S + ++ R ++ +
Sbjct: 83 SD--IVALIAMARQHSSIRTI 101
>gi|15898449|ref|NP_343054.1| coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
P2]
gi|227829520|ref|YP_002831299.1| radical SAM protein [Sulfolobus islandicus L.S.2.15]
gi|229578824|ref|YP_002837222.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
gi|229582436|ref|YP_002840835.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284997434|ref|YP_003419201.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
gi|13814874|gb|AAK41844.1| Coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
P2]
gi|227455967|gb|ACP34654.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15]
gi|228009538|gb|ACP45300.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228013152|gb|ACP48913.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445329|gb|ADB86831.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
Length = 350
Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD
Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
PL S + ++++ + + V + P P R++ E ++ + + + I++
Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKIISNYARYMSISL 114
>gi|289522200|ref|ZP_06439054.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504036|gb|EFD25200.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 323
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C+ C ++ ++S + EA L I + I V TGG P +
Sbjct: 31 LNITRRCNLCCKHCHVNA--SPKREEIMSREILEACLNVIDANN-ISVVDITGGSPEMHP 87
Query: 159 HKRLQKVLKTLRYIKHVQIL 178
L LK L +I+
Sbjct: 88 D--LAWFLKMLAR-PSRRII 104
>gi|253580717|ref|ZP_04857981.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848088|gb|EES76054.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 422
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 31/132 (23%)
Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C +C +C R + + V+ AA Y EV+ TG
Sbjct: 124 RAYIKVQDGCNQFCTYCIIPYARGRVRSRKIAHVMDEVHALAAKGY-------KEVVLTG 176
Query: 152 GDPLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
LS + L +++ + ++ ++ +R S ++P I E +Q +
Sbjct: 177 I---HLSSYGVDFPAEEKETLLSLIRAVHEVEGIERIRLGS----LEPGIITEEFVQSIA 229
Query: 202 EAGKPVYIAIHA 213
K + H
Sbjct: 230 ALPK---MCPHF 238
>gi|238928202|ref|ZP_04659962.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
ATCC 43531]
gi|238884162|gb|EEQ47800.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
ATCC 43531]
Length = 331
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C V + VL+ ++ + + + +V TGG+PL+
Sbjct: 14 VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRALAA-LGVRKVRLTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++++ L+ I ++ + + ++ + EL+
Sbjct: 73 RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110
>gi|261418751|ref|YP_003252433.1| YfkB-like domain protein [Geobacillus sp. Y412MC61]
gi|261375208|gb|ACX77951.1| YfkB-like domain protein [Geobacillus sp. Y412MC61]
Length = 387
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L ++E + + TGG+P +LS
Sbjct: 48 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 103
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +++ + L H + +R
Sbjct: 104 LKSVEQYVVPLLRYAHERGVR 124
>gi|99034401|ref|ZP_01314414.1| hypothetical protein Wendoof_01000782 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630069|ref|YP_002726860.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
gi|225592050|gb|ACN95069.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
Length = 408
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D +L L +++ L+ I ++ LR S + + + ++ EL+ + +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233
Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
+ +H + H E E + L
Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273
>gi|42520370|ref|NP_966285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410108|gb|AAS14219.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 408
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D +L L +++ L+ I ++ LR S + + + ++ EL+ + +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233
Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
+ +H + H E E + L
Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273
>gi|58696768|ref|ZP_00372305.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila simulans]
gi|58537042|gb|EAL60178.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
Drosophila simulans]
Length = 375
Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG
Sbjct: 90 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 144
Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D +L L +++ L+ I ++ LR S + + + ++ EL+ + +
Sbjct: 145 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 200
Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
+ +H + H E E + L
Sbjct: 201 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 240
>gi|325265342|ref|ZP_08132066.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
gi|324029343|gb|EGB90634.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
Length = 440
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 11/126 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C +C +C ++ G+ + + + Y+ E+ ++ L
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEKLLKEAQYLAEQGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
K L +LK L ++ ++ +R V P+ I ELIQ +KE K Y+ +
Sbjct: 204 GKDIYGEKSLHLLLKELCRVQGIRWIR----VLYCYPEEITDELIQVMKEEEKICHYLDL 259
Query: 212 HANHPY 217
H
Sbjct: 260 PIQHAN 265
>gi|323488006|ref|ZP_08093259.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
MPA1U2]
gi|323398274|gb|EGA91067.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
MPA1U2]
Length = 338
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ G K +LS ++ + ++ TGG+
Sbjct: 19 ISVTDRCNFRCSYCMPKEVFGDDYAFLPKQELLSFEEIHRLTKVFVAM-GVKKIRLTGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++++ + ++ V+ +
Sbjct: 78 PLM--RRGLPQLVEKILSVEGVEDI 100
>gi|257064192|ref|YP_003143864.1| pyruvate-formate lyase-activating enzyme [Slackia
heliotrinireducens DSM 20476]
gi|256791845|gb|ACV22515.1| pyruvate-formate lyase-activating enzyme [Slackia
heliotrinireducens DSM 20476]
Length = 201
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ C C C E+ + + + AL + + S + FTGGD
Sbjct: 15 PGSRIVVWTVGCSKRCPGCANPELWEASDANRIDNDQLAEALVRMAKASGTRAITFTGGD 74
Query: 154 PLILSHKRLQKVLKTLR 170
PL L VL+++R
Sbjct: 75 PLEQPDD-LAWVLRSIR 90
>gi|225018731|ref|ZP_03707923.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
DSM 5476]
gi|224948459|gb|EEG29668.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
DSM 5476]
Length = 409
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C YC +C + G + ++ + L + V+
Sbjct: 122 RTRAFVKIEDGCDRYCTYCIIPKARGPVRSKQMA--ELREELRDLAANGYKEVVLVGINL 179
Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L + RL ++ + ++ +R S ++P+ + E IQ L K
Sbjct: 180 SSYGRD---LENTRLIDAVRLACSVDGIERVRLGS----LEPELLTGEDIQTLASLPK 230
>gi|167760764|ref|ZP_02432891.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704]
gi|167661651|gb|EDS05781.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704]
Length = 476
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 62/222 (27%)
Query: 56 IARQFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
I + P EE L I + ED +G + G++ Y C C FCF
Sbjct: 59 IRK---PDGEEWLLEIDKDYDED-LGLEFDN---GLMSEYR---------TCSNKCIFCF 102
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+M + T+ Y ++ + F G+ + L++ +++ +
Sbjct: 103 IDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITLTNMKMEDI-------- 141
Query: 174 HVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+I++ H + Q NPEL + L H F+ E + + L
Sbjct: 142 -QRIVKMHLAPINISIQSTNPELRCKML-----------H----NRFAGEKLQFLDVLYE 185
Query: 233 AGIILLSQSVLLKGINDDPE---ILANLMRTFVELR---IKP 268
I + Q V K +ND PE + +L R +R + P
Sbjct: 186 NHIEMNGQVVACKNVNDGPELERTIDDLSRYLPFMRSVSVVP 227
>gi|297584204|ref|YP_003699984.1| molybdenum cofactor biosynthesis protein A [Bacillus
selenitireducens MLS10]
gi|297142661|gb|ADH99418.1| molybdenum cofactor biosynthesis protein A [Bacillus
selenitireducens MLS10]
Length = 339
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F + K +LS ++ + +++ I ++ TGG+
Sbjct: 18 ISVTDKCNFRCSYCMPPEIFDKYFKFLPKDEILSFEEITRLSTIMVKEAGIRKLRVTGGE 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + K++ L I+ V +
Sbjct: 78 PLM--RHEVSKLIAMLNKIEGVDDI 100
>gi|91775006|ref|YP_544762.1| tRNA-i(6)A37 modification enzyme MiaB [Methylobacillus flagellatus
KT]
gi|122985599|sp|Q1H3L6|MIAB_METFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|91708993|gb|ABE48921.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacillus
flagellatus KT]
Length = 442
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 26/137 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
H P R+ L ++ C YC FC G + TEA + +
Sbjct: 140 HLPPPRVEGAAAFLSIMEGCSKYCTFCVVPYTRGDEVSRPFDDILTEAIQ---LAEQGVK 196
Query: 146 EVIFTG----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
E+ G D + L +++ L I ++ +R+ + P + P
Sbjct: 197 EITLLGQNVNGYRSETADGEMAD---LALLIEYLAEIPEIERIRYTTSH----PNEMTPA 249
Query: 196 LIQCLKEAGKPVYIAIH 212
LI C K + +H
Sbjct: 250 LIDCYARIPK-LVSHLH 265
>gi|49085554|gb|AAT51287.1| PA2956 [synthetic construct]
Length = 299
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC + +Q ++D L I+ + + V G
Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL VL+ +R + V+ +
Sbjct: 80 DALVLPTRRLLAVLQAIREHLPEVERV 106
>gi|255994803|ref|ZP_05427938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
49989]
gi|255993516|gb|EEU03605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
49989]
Length = 484
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 16/143 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C YC +C V Q + E A +++ E++ TG +
Sbjct: 184 RKRAYIKIQDGCDRYCTYCIIAH-VRGQVRSKKVDDIYEEAKKLVED--GYREIVLTGIN 240
Query: 154 -PLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L K + V+ + I +R S P V +N E I +K K
Sbjct: 241 TALYGEDLHQGIGKSMVDVINKISTIPGDFRIRIGSLEPTV----VNKEYINLIKNLPK- 295
Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
+ H + S + +AA+ R
Sbjct: 296 LCRHAHLS-VQSGSNDVLAAMGR 317
>gi|124005079|ref|ZP_01689921.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
23134]
gi|123989331|gb|EAY28892.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
23134]
Length = 334
Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 21/180 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C E + K +LS ++ E + + + ++ TGG+P +
Sbjct: 20 LAVTDRCNLRCFYCMPEEGIKYLPKKHLLSYEEMERLVRLLASM-GVNKIRLTGGEPFLR 78
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCLKEAGKPVY 208
L ++T+R I+ + L + + P + + + L +
Sbjct: 79 KD--LINFMQTIRNIEGINELNITTNGVLTEQYIPAMVKMGISSVNLSLDTLDKERF--- 133
Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRTFVELRIK 267
+ EF + + + L +GI V++ G N +D LA L RT + ++
Sbjct: 134 --LKITRRNEFDK-VMRCLDALIESGIKTKINMVVMAGQNTEDIVPLAELTRT-HAIGVR 189
>gi|319646960|ref|ZP_08001188.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2]
gi|317391019|gb|EFV71818.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2]
Length = 373
Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 58 RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
Q P E + + D GD + ++ +C + C C
Sbjct: 5 MQVRPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ ++ L L I ++ + TGG+P +LS K +++ + L H +
Sbjct: 54 TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109
Query: 177 ILR 179
+R
Sbjct: 110 GVR 112
>gi|304315571|ref|YP_003850716.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777073|gb|ADL67632.1| Radical SAM domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 378
Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA----YIQEKS--QIWEVI 148
+ I+ K+ + C + C++C+R+ + LS + E A YI+ + + +
Sbjct: 13 NSIIFKVTNSCNLDCQYCYRK-KAKLENKQKLSLEILEKAFRDYSNYIEANNLDKTMNFV 71
Query: 149 FTGGDPLILSHKRLQKVLK 167
+ GG+PLI+ K++
Sbjct: 72 WHGGEPLIVDIDFYNKIIS 90
>gi|288869733|ref|ZP_05975994.2| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374]
gi|288861360|gb|EFC93658.1| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374]
Length = 376
Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
+++ C C++C+ E + + + ++++ + F GG+PL
Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDINV----IDDIITWLKDFRDDKVHFTFHGGEPL 60
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + + L+ L I +++ S + ++ ELI + V ++ +
Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113
Query: 216 PYEFS 220
P E +
Sbjct: 114 PEEIN 118
>gi|163757739|ref|ZP_02164828.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
DFL-43]
gi|162285241|gb|EDQ35523.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
DFL-43]
Length = 480
Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 22/131 (16%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQ 121
E E++ D + D + G + L + C +C FC R V
Sbjct: 149 ETEFPTEDKFDRLPDASA----GTIRTRGVTAFLTVQEGCDKFCTFCVVPYTRGAEVSRP 204
Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----LILSHKR---LQKVLKTLRYIKH 174
++S + AA + EV G + S R L +++ L I+
Sbjct: 205 VERIMSEAERLAAA-------GVREVTLLGQNVNAWHGQGSDGREWGLGELVHRLAAIEG 257
Query: 175 VQILRFHSRVP 185
+ +R+ + P
Sbjct: 258 IDRIRYTTSHP 268
>gi|187927999|ref|YP_001898486.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12J]
gi|187724889|gb|ACD26054.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
12J]
Length = 373
Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E E + ++ TGG+
Sbjct: 48 VSVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSH-KRLQKVLKTL 169
PL+ +RL ++L L
Sbjct: 107 PLLRKDIERLVEMLARL 123
>gi|328871501|gb|EGG19871.1| molybdenum cofactor synthesis 1 [Dictyostelium fasciculatum]
Length = 431
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + + L C + C++C E V Q +++ ++ L+ + + + ++ FT
Sbjct: 109 RKHTYLRISLTERCNLRCQYCMPEEGVQLQPSENIMTDQEIIK-LSRLFVSAGVTKIRFT 167
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209
GG+PL+ K ++ +++ + IK ++ + + ++ L++AG + I
Sbjct: 168 GGEPLV--RKNIESMIEEIGKIKGLETIAMTTNAIA------LGRKLERLQKAGLNLLNI 219
Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLLKGIN 248
++ +F+ ++ +I + + G + V++K IN
Sbjct: 220 SLDTLDANKFTIITRRLGWDKVKESIDKALSLGFNPVKINCVVMKNIN 267
>gi|319765567|ref|YP_004131068.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52]
gi|317110433|gb|ADU92925.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52]
Length = 374
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +++ + L H + +R
Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111
>gi|323344658|ref|ZP_08084882.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269]
gi|323093928|gb|EFZ36505.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269]
Length = 72
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I+ ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|307243292|ref|ZP_07525459.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
gi|306493310|gb|EFM65296.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
Length = 431
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 21/128 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R +K+ C YC +C + + S+D ++ + I+ + EV+ TG
Sbjct: 141 KTRAFIKIQDGCDRYCSYC-----IIPYARGRIRSRDRQSIIEEIEKLAANGYKEVVLTG 195
Query: 152 GDPLILSHKRLQKVLKTLRYIKHV------QILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + + L IK V + +R S V+P + I + + K
Sbjct: 196 IHVASYG-RDLDEDIDILTVIKDVNKVEGIERIRLSS----VEPVLFTEDFIDQISKIDK 250
Query: 206 PVYIAIHA 213
+ H
Sbjct: 251 ---LVPHY 255
>gi|78042734|ref|YP_360230.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Carboxydothermus hydrogenoformans Z-2901]
gi|123576193|sp|Q3ACA4|MIAB_CARHZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|77994849|gb|ABB13748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydothermus
hydrogenoformans Z-2901]
Length = 440
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 29/166 (17%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGI-VHRYPD-RILLKLLHVCPVYCRFCFRREMV 118
+P+ E ER + + ++GI V R P R + +++ C +C +C +
Sbjct: 113 LPKILERVFEKHERVLEVWQSEGQIVEGIPVKREPGVRAWVTIMYGCNNFCTYCIVPYVR 172
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-----------PLILSHKRLQKVLK 167
G ++ +D + + EV G + P+ ++L
Sbjct: 173 GRERSR--KKEDILQEIRQLVA-EGYREVTLLGQNVNSYGKDLKGKPMF------AELLA 223
Query: 168 TLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLKEAGKPVYIAIH 212
+ I + +RF + P R + ++I+ + + K + +H
Sbjct: 224 DIEKIDGLWRVRFTTSHP-----RDLTDDVIEVMASSRK-ICEHLH 263
>gi|32476670|ref|NP_869664.1| 2-methylthioadenine synthetase [Rhodopirellula baltica SH 1]
gi|81659389|sp|Q7UK39|RIMO_RHOBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|32447216|emb|CAD77042.1| conserved hypothetical protein-putative 2-methylthioadenine
synthetase [Rhodopirellula baltica SH 1]
Length = 477
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154
LK+ C C FC + +G S E + + S + EV+ D
Sbjct: 179 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 233
Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
R L ++LK L I+ + +R P I+ LI L A + V
Sbjct: 234 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASARRIV 287
>gi|15598152|ref|NP_251646.1| hypothetical protein PA2956 [Pseudomonas aeruginosa PAO1]
gi|116050958|ref|YP_790217.1| hypothetical protein PA14_25810 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890846|ref|YP_002439710.1| putative oxidase [Pseudomonas aeruginosa LESB58]
gi|254235931|ref|ZP_04929254.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254241666|ref|ZP_04934988.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388552|ref|ZP_06878027.1| putative oxidase [Pseudomonas aeruginosa PAb1]
gi|313108140|ref|ZP_07794275.1| putative oxidase [Pseudomonas aeruginosa 39016]
gi|9949053|gb|AAG06344.1|AE004721_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115586179|gb|ABJ12194.1| putative oxidase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126167862|gb|EAZ53373.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126195044|gb|EAZ59107.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771069|emb|CAW26834.1| putative oxidase [Pseudomonas aeruginosa LESB58]
gi|310880777|gb|EFQ39371.1| putative oxidase [Pseudomonas aeruginosa 39016]
Length = 298
Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
++L + + C C FC + +Q ++D L I+ + + V G
Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
D L+L +RL VL+ +R + V+ +
Sbjct: 80 DALVLPTRRLLAVLQAIREHLPEVERV 106
>gi|302385460|ref|YP_003821282.1| molybdenum cofactor biosynthesis protein A [Clostridium
saccharolyticum WM1]
gi|302196088|gb|ADL03659.1| molybdenum cofactor biosynthesis protein A [Clostridium
saccharolyticum WM1]
Length = 322
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E +V G +L+ + + I +V TGG+PL+
Sbjct: 14 ISVTDRCNLRCVYCMPEEGIVPMSHGDILTYHEILRICEA-GARLGIRKVKVTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
++ ++K L+ I ++ + +
Sbjct: 73 KD--IEVLIKGLQSIPGIEDVTMTT 95
>gi|282881461|ref|ZP_06290135.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
gi|281304687|gb|EFA96773.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
Length = 455
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C K E A A E++ TG
Sbjct: 163 RTRYFLKVQDGCNYFCTYCTIPFARGFSRNPSIDFLVKQAEQAAA-----EGGKEIVLTG 217
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ +++ ++K L ++ ++ R S ++P I+ ELI +
Sbjct: 218 VNIGEFGESTNETFLDLVKALDQVQGIKRFRISS----LEPDLIDDELIDYCAHSR---A 270
Query: 209 IAIHA 213
H
Sbjct: 271 FMPHF 275
>gi|56418960|ref|YP_146278.1| hypothetical protein GK0425 [Geobacillus kaustophilus HTA426]
gi|56378802|dbj|BAD74710.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 374
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +++ + L H + +R
Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111
>gi|297531281|ref|YP_003672556.1| YfkB-like domain protein [Geobacillus sp. C56-T3]
gi|297254533|gb|ADI27979.1| YfkB-like domain protein [Geobacillus sp. C56-T3]
Length = 374
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +++ + L H + +R
Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111
>gi|253699518|ref|YP_003020707.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. M21]
gi|251774368|gb|ACT16949.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. M21]
Length = 332
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+ +YP ++L+ H+C + C C R ++S + L + E V
Sbjct: 23 IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78
Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHV 175
TGG+P + + ++++ L KH+
Sbjct: 79 TGGEPFLYP--HIFQLIEKVLARGKHI 103
>gi|154174160|ref|YP_001409198.1| radical SAM family protein [Campylobacter curvus 525.92]
gi|112803526|gb|EAU00870.1| radical SAM [Campylobacter curvus 525.92]
Length = 417
Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 6/111 (5%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + L C C FCF +K + A ++ + V TGG+P
Sbjct: 67 DTHSVYLSLKCNKNCYFCFNPNQDDFKKDVKRKFAAKQIANKILKNNQNVKFVALTGGEP 126
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L+ L+ I + H R + I+ + ++ LK +G
Sbjct: 127 LLYKDDALE-----FFKIINESNTTIHKR-LYTNGTLIDTKYLKKLKSSGL 171
>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
Length = 460
Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 22/196 (11%)
Query: 44 ANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
A+LI ++ P P + + D + S R R L +H
Sbjct: 9 ADLIRRYDLAGP-RYTSYPTAVQFHDAIG-PFDLLHALRDS-------RKAGRPLSLYVH 59
Query: 104 V--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C C +C +++ +G L ++ E YI + I ++ F GG P
Sbjct: 60 IPFCAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTF 119
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
LSH L+++++ LR ++ +DP+ + + L+E G V + +
Sbjct: 120 LSHDELRRLMQHLRQHFNLLDDDSGDYSIEIDPREADWSTMGLLRELGFNRVSLGV---- 175
Query: 216 PYEFSEEAIAAISRLA 231
+ E A++RL
Sbjct: 176 -QDLDPEVQRAVNRLQ 190
>gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 452
Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE-MVGSQKGTVL---S 127
EDP+ +N++ P +G+V + L L L H C + CR+CF + G +
Sbjct: 73 FSEDPLQNNDYLPGEGVV-----KALCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVG 127
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
K E + + I EV F GG+PL ++ K LQ ++
Sbjct: 128 KKAMEFLIKSSGSRRNI-EVDFFGGEPL-MNFKVLQDLV 164
>gi|169828828|ref|YP_001698986.1| hypothetical protein Bsph_3362 [Lysinibacillus sphaericus C3-41]
gi|168993316|gb|ACA40856.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 370
Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L + L + E + + TGG+P ++S
Sbjct: 33 FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IDLILQRLDEIPHLKTLSITGGEP-MMS 88
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +Q + L H + +R
Sbjct: 89 KKSVQSYVLPLLKYAHERGVR 109
>gi|327480469|gb|AEA83779.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri
DSM 4166]
Length = 331
Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C +MV + + +L+ ++ A + + TGG+PL+
Sbjct: 19 LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
K L +L L ++ L S++P L L+EAG + I +
Sbjct: 76 RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLREAGVR-RLNISLDS 125
Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
E + ++ + I +AG I L+ SV+ KG NDD
Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171
>gi|295400597|ref|ZP_06810575.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|294977500|gb|EFG53100.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 374
Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L + + ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
K + + L H + +R ++N L L K P +H +H
Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139
>gi|225374900|ref|ZP_03752121.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
16841]
gi|225213283|gb|EEG95637.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
16841]
Length = 480
Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ +Y + + ++ C +C +C + G ++ K+ + ++ + + EV+
Sbjct: 183 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIVREIEHLVQD-GVVEVM 239
Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G + P+ ++L+ + I+ ++ +RF + P+ ++ ELI+
Sbjct: 240 LLGQNVNSYGRNLEHPMTF-----AQLLQEIEKIEGLERIRFMTSH----PKDLSDELIE 290
Query: 199 CLKEAGKPVYIAIH 212
+K + K + +H
Sbjct: 291 VMKNS-KKICNHLH 303
>gi|317473569|ref|ZP_07932859.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316898971|gb|EFV20995.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 171
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126
E + + + +G+V+R P ++++ C C FC +E +
Sbjct: 12 ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184
D A Y + I ++ GD LI ++ L ++LK +R I + + + S
Sbjct: 72 VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIA 210
++ E ++ L+E G +
Sbjct: 129 SVMIK---TKEELRELRENGLDMVYM 151
>gi|228985631|ref|ZP_04145784.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774026|gb|EEM22439.1| antilisterial bacteriocin (subtilosin) production [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 86
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L
Sbjct: 7 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 64
Query: 137 YIQEKSQIWEVIFTGGD 153
+ + + TGGD
Sbjct: 65 DL-NHIGVKLIELTGGD 80
>gi|221111831|ref|XP_002167227.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 802
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + + + L C + C +C E V + K +L++++ LA + + ++ T
Sbjct: 104 RKHNYLRISLTERCNLRCGYCMPEEGVLLTNKDDLLTNEEMIR-LARLFVFEGVNKIRLT 162
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PV 207
GG+PL+ + ++ L +K ++ L + + + + LK+AG +
Sbjct: 163 GGEPLVRKD--IVQICDQLSSLKGLKTLAITTNGLVA------EQKLLYLKQAGLTNVNI 214
Query: 208 YIAIHANHPYEFS------EEAIAAISR---LANAGIILLSQSVLLKGINDD 250
+ +EF + AI + L + + V++KG+NDD
Sbjct: 215 SLDTMIEKKFEFISRRKGLTKVFNAIEKAIELKFNSVKINC--VVMKGLNDD 264
>gi|186475181|ref|YP_001856651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
phymatum STM815]
gi|229890465|sp|B2JD88|MIAB_BURP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|184191640|gb|ACC69605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phymatum
STM815]
Length = 456
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203
Query: 154 -----PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L + +++ + I ++ +R+ + P+ LI + K
Sbjct: 204 NAYRGAMTLGATEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVPK 259
Query: 206 PVYIAIH 212
+ +H
Sbjct: 260 -LVSHLH 265
>gi|78045218|ref|YP_360312.1| radical SAM protein [Carboxydothermus hydrogenoformans Z-2901]
gi|123770585|sp|Q3AC22|RLMN_CARHZ RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|77997333|gb|ABB16232.1| radical SAM enzyme, Cfr family [Carboxydothermus hydrogenoformans
Z-2901]
Length = 342
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 44/246 (17%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEV 147
+ +RY + + L C + C+FC +G + + + E L S+ I V
Sbjct: 95 LKYRYGNTVCLSTQVGCKMGCKFCATG--LGGFSRNLTAGEMIEQILVLKASSSEKITRV 152
Query: 148 IFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-----PQRINPELIQCLK 201
+ G G+PL +VLK +R I L R V PQ I+ L
Sbjct: 153 VLMGSGEPL----DNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQ------IKALA 202
Query: 202 EAGKPVYIAIHANHP-----YEFSEEAIA-AISRLANAGIILLSQS--------VLLKGI 247
E PV +AI + P E ++ L +A + ++ L++ +
Sbjct: 203 EEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENV 262
Query: 248 NDDPE----ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
ND E + L R V + + PY +F+ E + ++ +G
Sbjct: 263 NDTVEHALKLAQLLQRKLVHVNLIPY------NTIEKRNFKTPSVEKINKFKEVLKR-AG 315
Query: 304 LCQPFY 309
+
Sbjct: 316 IPVTVR 321
>gi|89100455|ref|ZP_01173317.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
gi|89084798|gb|EAR63937.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
Length = 450
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G ++ S+D + + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVIRQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + L +L+ L +K ++ LR S ++ +I E+I+ + ++
Sbjct: 197 IHTGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDKS 249
Query: 204 GKPVYIAIHA 213
V +H
Sbjct: 250 EV-VVRHLHI 258
>gi|315608941|ref|ZP_07883913.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC
33574]
gi|315249321|gb|EFU29338.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC
33574]
Length = 390
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154
+ C + C++C+ + + + V+S + E YIQ ++ + +V+FT GG+P
Sbjct: 1 MGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 59
Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L+ + L K + R I + + + + E + KE
Sbjct: 60 LM---RPLSFYRKAVALQEKYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 107
Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249
V I+ + P EF +E + I L G+ + +V +ND
Sbjct: 108 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 158
>gi|306820795|ref|ZP_07454420.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551185|gb|EFM39151.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 457
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + ++S + + AL Y+ E S EV F GG+PL
Sbjct: 99 LHVAHDCNLRCSYCFASQGDFGGDKEIMSLEVGKKALDYLVEHSGNRRNLEVDFFGGEPL 158
Query: 156 I 156
+
Sbjct: 159 M 159
>gi|319762446|ref|YP_004126383.1| molybdenum cofactor biosynthesis protein a [Alicycliphilus
denitrificans BC]
gi|330825703|ref|YP_004389006.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans K601]
gi|317117007|gb|ADU99495.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans BC]
gi|329311075|gb|AEB85490.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
denitrificans K601]
Length = 389
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 14/92 (15%)
Query: 92 RYPDRIL------LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQE 140
Y R + + C C +C F + +LS ++
Sbjct: 41 LYDTRARPLRDLRISVTDRCNFRCSYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMA 100
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ ++ TGG+PL+ L+ +++ L +
Sbjct: 101 H-GVHKIRLTGGEPLLRKD--LELLVEQLAGL 129
>gi|289667851|ref|ZP_06488926.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 343
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
LP+ P+ D PL+ + L ++ C C +C + V G
Sbjct: 6 LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182
LS E + + +V TGG+PL+ L ++ L I+ ++ L +
Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLGAIEGIEDLALTTNGT 114
Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
R + Q RI P L + + + + E + I+
Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174
Query: 229 RLANAGI 235
+ GI
Sbjct: 175 CVVQRGI 181
>gi|265750577|ref|ZP_06086640.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237473|gb|EEZ22923.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 368
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 32/165 (19%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
R P +L C + C CF R V + G + + +Q+ ++ +
Sbjct: 20 QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI---------------KHVQILRFHSRVPIVDPQRI 192
+ TGG+P++ +++ LR + + V+IL+ H P+RI
Sbjct: 79 LLTGGEPMLYP--HFKELYTRLREMGFILTLNTNGTLIDNEMVRILQIH------KPRRI 130
Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
N L +E + H + + A+ RL A I +
Sbjct: 131 NVTLYGDSRETYGRL------CHNPQGYTLCMEALKRLKKADIDV 169
>gi|118582017|ref|YP_903267.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504727|gb|ABL01210.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
Length = 357
Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 49/164 (29%)
Query: 86 LKGIVHRYP--DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
GI RY +R+ + ++C C FC ++ VL+ + +
Sbjct: 37 ADGIRRRYHPENRVTFVVDRNVNYTNICESRCSFCAFYRDAAAKDAYVLTPDEIFTKITE 96
Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
+ E ++ G +P L+ +++ + +R P V
Sbjct: 97 LVELEGTQLLMQGGLNP-SLTIDYFEELFRE-----------IGTRFPSV---------- 134
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-------AAISRLANAG 234
H+ P E + A A+ RL AG
Sbjct: 135 ------------QNHSLSPAEITCIARVSGLTIDTALERLHRAG 166
>gi|257439153|ref|ZP_05614908.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
prausnitzii A2-165]
gi|257198404|gb|EEU96688.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
prausnitzii A2-165]
Length = 409
Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 18/119 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C C +C G + + L + S EV+ +
Sbjct: 119 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEDSILKELRQLAA-SGYREVVLSAIS 175
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L ++++ ++ ++ +R S +DP + PE I L K
Sbjct: 176 LPSYGLDTGT----NLVELVEKCAQVEGIERIRLGS----LDPDMLTPEFITRLAAVEK 226
>gi|312112313|ref|YP_003990629.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
gi|311217414|gb|ADP76018.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
Length = 374
Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L + + ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
K + + L H + +R ++N L L K P +H +H
Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139
>gi|226334870|ref|YP_002784542.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
opacus B4]
gi|226246090|dbj|BAH56190.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
opacus B4]
Length = 305
Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R+ + L C + C +C G KG+ S A + + ++ +VI +GG+P
Sbjct: 6 GRLRVFLTEQCNLACFYC---HNEGQPKGSAYLSDQLFDAAVSMSRQPEVEKVILSGGEP 62
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L+ R+ ++++ + +V + ++ P L + V
Sbjct: 63 LLHP--RVLELVEAVS--PNVARSSLITNGLLLTPSLARDLAFAGLSKIRLGV 111
>gi|311032494|ref|ZP_07710584.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
Length = 495
Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
I D + + + + + CP C +C F + ++G V S +
Sbjct: 150 IVDRQLDVVPDLHDLGEEVSIYIGIPFCPTKCAYCTFPAYAINGKQGKVDSFLGGLHHEI 209
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
+A A+++EK +I V + GG P ++ + + + + + ++ +R + V P
Sbjct: 210 DAIGAWLKEKGIKITTVYYGGGTPTSITAEEMDMLYEQMYASFPDMEKVREVT-VEAGRP 268
Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
I PE + LK+ + I P +++E + AI R
Sbjct: 269 DTITPEKLDVLKKWNIDRISIN-----PQSYTQETLKAIGR 304
>gi|217967463|ref|YP_002352969.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
6724]
gi|217336562|gb|ACK42355.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
6724]
Length = 441
Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157
C +C +C + G +K ++ + ++ + + + G D L
Sbjct: 155 GCNNFCTYCIVPYLRGKEKSR--DPQEIIKEIEHLANQGVVEVTLLGQNVDSYGKD---L 209
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ L +L + I ++ +RF + P
Sbjct: 210 GNVDLADLLVEIHKIPGIKRIRFLTSHP 237
>gi|212695675|ref|ZP_03303803.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
7454]
gi|212677348|gb|EEB36955.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
7454]
Length = 358
Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154
+ CP C FC + + + K ++ K + L+Y E+ F GG
Sbjct: 10 IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67
Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
L + L+ K + +R +R P IN ++ LK+ V
Sbjct: 68 FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122
Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240
++AN H E ++I A + G L Q
Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161
>gi|329962041|ref|ZP_08300052.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057]
gi|328530689|gb|EGF57547.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057]
Length = 346
Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 50/202 (24%)
Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
DR L + C + C+FC M G Q T L++ ++ + E+ ++ V+ G
Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMMG 155
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
G+PL L +VLK L + S P+RI L + ++E+
Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEES 204
Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
+ +++H P E A +I+ + +L + Q V KG+
Sbjct: 205 DCHLAVSLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260
Query: 248 NDD---PEILANLMRTFVELRI 266
ND + L L+R + RI
Sbjct: 261 NDSLLYAKELLKLLRGL-DCRI 281
>gi|303239989|ref|ZP_07326511.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
gi|302592468|gb|EFL62194.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
Length = 393
Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
P+ + LKL + C + C+ CF+ L D + + E +I +
Sbjct: 42 PESVGLKLTNRCNLRCKHCFQWNESGYHRFMDHDCQSLDM-DIDLFNKILVETQEIKSRL 100
Query: 149 -FTGGDPLILSH-KRLQKVLK 167
GG+PL S R+ +L+
Sbjct: 101 YLWGGEPLYHSDFDRIAGLLE 121
>gi|269127512|ref|YP_003300882.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
43183]
gi|268312470|gb|ACY98844.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
43183]
Length = 484
Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 32/145 (22%)
Query: 99 LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
LKL C C FC FR V VL+ A + + EV+
Sbjct: 179 LKLASGCDRRCTFCAIPAFRGAYVSRDPQEVLAEAAWLA-------ERGVREVVLVSENS 231
Query: 151 ---GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCL-KEAG 204
G D L + L+K+L L I ++ +R P + P LI+ L G
Sbjct: 232 TSYGKD---LGDLRALEKLLPQLAAIDGIERVR-----LSYLQPAELRPGLIEVLCTTPG 283
Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
Y + H S + + R
Sbjct: 284 VAPYFDLSFQHA---SGPVLRRMRR 305
>gi|229918072|ref|YP_002886718.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b]
gi|229469501|gb|ACQ71273.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b]
Length = 238
Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 23/141 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAY---IQEKSQIWEVIF 149
P + L C + C +C + +K S++D + AL+Y ++ +
Sbjct: 18 PGIRFIVFLQGCALRCLYCHNADTWDFKKNNHRSAEDVIQEALSYRPFMEASKG--GITI 75
Query: 150 TGGDPLILSHKRLQKVLKTLRYI--------------KHVQILRFHSRVPIVDPQRINPE 195
+GGDPL + L+ +L+ + ++ + H+ + ++D + I+ +
Sbjct: 76 SGGDPL-AQPEFLEALLREAKKHGLHTTLDTSGALRPPNLDAILDHTDLVLLDIKHIDDD 134
Query: 196 LIQCL--KEAGKPVYIAIHAN 214
+ + L + + +A H +
Sbjct: 135 MCKKLTGRSNANTLALAEHLS 155
>gi|188582019|ref|YP_001925464.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
BJ001]
gi|179345517|gb|ACB80929.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
BJ001]
Length = 344
Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 30 ISVTDRCDFRCAYCMAEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+RL + LK+ + + + S++ R PEL L V +
Sbjct: 89 DIMHLFRRLSRHLKS-GALDELTLTTNGSQL-----ARFAPELAD-LGVRRINVSLDT-- 139
Query: 214 NHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
E AI+R +AGI + +V LKG+N+D
Sbjct: 140 -----LDAEKFRAITRRGDLSVVLAGIEAARSAGIKVKINAVALKGVNED 184
>gi|284045650|ref|YP_003395990.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
14684]
gi|283949871|gb|ADB52615.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
14684]
Length = 330
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + + C C++C + + ++ +L+ ++ + + + +V TGG+PL
Sbjct: 16 VRISVTDRCNFRCQYCMPADGLPWLEREEILTFEEIARLVGLLASM-GVHDVRLTGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ ++++ L I V L +
Sbjct: 75 VRRD--FPRLVEMLAAIPAVHDLSITT 99
>gi|262383650|ref|ZP_06076786.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B]
gi|262294548|gb|EEY82480.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B]
Length = 416
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 11/84 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVIFTGGD 153
+ C + C++C+ +VG +S + A+ YI E + F GG+
Sbjct: 25 FIVTKDCQLACKYCY---LVGKNTNERMSWEIARKAIDYILEHENDMPEESVTWDFIGGE 81
Query: 154 PLI---LSHKRLQKVLKTLRYIKH 174
P + L + + + H
Sbjct: 82 PFLEIDLIDRICDYIKTEMYRRNH 105
>gi|224025812|ref|ZP_03644178.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
18228]
gi|224019048|gb|EEF77046.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
18228]
Length = 163
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 22/59 (37%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C C E Q G L+ + E + I + + F+GGDP + L
Sbjct: 26 GCHHRCPGCHNPESWNPQAGKPLTPEVLEDIIQSINSNPLLDGITFSGGDPFFNPKEFL 84
>gi|212691074|ref|ZP_03299202.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
gi|237712425|ref|ZP_04542906.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237726616|ref|ZP_04557097.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265752128|ref|ZP_06087921.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
gi|212666306|gb|EEB26878.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
gi|229435142|gb|EEO45219.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229453746|gb|EEO59467.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236920|gb|EEZ22390.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
Length = 438
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L + ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|170693394|ref|ZP_02884553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
C4D1M]
gi|170141549|gb|EDT09718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
C4D1M]
Length = 461
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L + + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGALTVGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265
>gi|188585813|ref|YP_001917358.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350500|gb|ACB84770.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 446
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P G+ + +K R LK+ C +C +C + L S+ E ++
Sbjct: 137 PKGEFENLKIKNFKKHDRTRHFLKIQEGCDQFCSYC-----IIPYARGHLRSRPPEDVIS 191
Query: 137 YIQE--KSQIWEVIFTGGD--PLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDP 189
I++ + E++ TG + + L + L I H++ +R S +P
Sbjct: 192 EIKQAVSNGFKEIVLTGINLGAYGRENSNLPNLATLLDKIIHLKGDYRIRLSS----CEP 247
Query: 190 QRINPELIQCLKEAGKPVYIAIHA 213
Q I L++ + + K + +H
Sbjct: 248 QEITIGLLELVTNSEK-ICKHLHI 270
>gi|150002616|ref|YP_001297360.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
gi|254881421|ref|ZP_05254131.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294777900|ref|ZP_06743343.1| MiaB-like protein [Bacteroides vulgatus PC510]
gi|319642808|ref|ZP_07997446.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
gi|149931040|gb|ABR37738.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
gi|254834214|gb|EET14523.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294448253|gb|EFG16810.1| MiaB-like protein [Bacteroides vulgatus PC510]
gi|317385552|gb|EFV66493.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
Length = 438
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L + ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|34499604|ref|NP_903819.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Chromobacterium violaceum ATCC 12472]
gi|81654199|sp|Q7NQI8|MIAB_CHRVO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|34105455|gb|AAQ61810.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 444
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 14/107 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
+ ++ C YC FC V S+ E L I + E+ G +
Sbjct: 148 AFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNV 202
Query: 155 ----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
++S + +L+ + + V+ +RF + P QRI
Sbjct: 203 NAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIID 249
>gi|152979335|ref|YP_001344964.1| molybdenum cofactor biosynthesis protein A [Actinobacillus
succinogenes 130Z]
gi|171704353|sp|A6VPY2|MOAA_ACTSZ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|150841058|gb|ABR75029.1| molybdenum cofactor biosynthesis protein A [Actinobacillus
succinogenes 130Z]
Length = 336
Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 22/162 (13%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + VC C +C ++ L+ + A++ +V TGG+P L
Sbjct: 26 LSITDVCNFRCNYCLPDGYHPSHERDKFLTVDEIRRAVSAFAAMGA-QKVRITGGEP-TL 83
Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
LQ + + L I+HV + R+ ++ + + +++ +
Sbjct: 84 RKDFLQITENITALDGIRHV--------ALTTNGYRMAQDVGAWKQAGISSINVSVDSLD 135
Query: 216 PY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGIN 248
P + + E + I R AG + SVL+K +N
Sbjct: 136 PRMFYQITGENKFTEVMRGIDRAFEAGYRKIKVNSVLMKDLN 177
>gi|331085298|ref|ZP_08334384.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|330408081|gb|EGG87571.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 440
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C +C +C ++ G+ + + + + E+ ++ L
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLVREAEELAEQGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
K L K+LK L I ++ +R V P+ I ELIQ +KE K
Sbjct: 204 GKDLYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252
>gi|284990944|ref|YP_003409498.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM
43160]
gi|284064189|gb|ADB75127.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM
43160]
Length = 370
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 26/229 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP++C +C + + L++ + + L + ++ +GG+PL+
Sbjct: 12 LLAELTYGCPLHCSYCS-NPIDLAAHTDELTTAEWQRVLVE-ARDLGVLQLHLSGGEPLL 69
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ + L ++ + + P+R L L V I++ A+
Sbjct: 70 RRDLPEIVRCAGELGLYTNLI-----TSALGLTPRRAEELLAAGLD----HVQISLQADE 120
Query: 216 P---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
F + +AA + G L VL + D + +L RI
Sbjct: 121 AALSDRLAGVRSFERKLVAA-RLVKELGWPLTLNVVLHRHNVDRVASILDLAEQLGADRI 179
Query: 267 K----PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
+ YY G R +E Q +V + +E++ G + Y+L
Sbjct: 180 ELAHTQYYGWALRNRDGLLPSRAQLERAQDVVRAARERLQGRMEVIYVL 228
>gi|284050769|ref|ZP_06380979.1| molybdenum cofactor biosynthesis protein A [Arthrospira platensis
str. Paraca]
gi|291572046|dbj|BAI94318.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 420
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C YC +CF EM S K TVL+ + E + +I + + GG+P +
Sbjct: 3 LIVIDKCSNYCAYCFASTEMGKSGKKTVLTREGIERVVQFISRSGPNFRLNIIGGEPFLY 62
Query: 158 SHKRLQKVLKT 168
L +L+
Sbjct: 63 KD--LVYLLEK 71
>gi|300024258|ref|YP_003756869.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526079|gb|ADJ24548.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium
denitrificans ATCC 51888]
Length = 349
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 41/174 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +LS ++ + + + + ++ TGG+PL+
Sbjct: 34 VSVTDRCDFRCVYCMSEHMTFLPKRDLLSLEELDVLCSAFVRR-GVKKLRITGGEPLV-- 90
Query: 159 HKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRINPEL 196
K + + + L H++ L + V I+P+
Sbjct: 91 RKNIMWLFEALGR--HLESGDLKELTLTTNGSQLEKYAGELKAAGVERINVSIDTIDPDK 148
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G + + AGI + +V LKG+N+D
Sbjct: 149 FKAITRWGNLATVM--------------RGLDAAEKAGIKIKINAVALKGVNED 188
>gi|284047809|ref|YP_003398148.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM
20731]
gi|283952030|gb|ADB46833.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM
20731]
Length = 326
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 84 SPLKGIVHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+ ++ VH Y R + + + + C +C FC +E G S + ++ +
Sbjct: 7 TAVEAAVHPYKTRSGGATVTVFVPYDCRNHCPFCVNKEEYADMTG--FSLEAICQSIRKM 64
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ + +FTGG+PL + K LQ +L + V ++ +P+ ++ E++
Sbjct: 65 DALTPYCDFVFTGGEPL-ANLKSLQAMLDQVSDTHKVY---INTTLPVSR-EQSEEEVLA 119
Query: 199 CLKE-AGKPVYIAI--HANHPYE 218
LK+ AGK + I H H E
Sbjct: 120 FLKKNAGKITCLNISRHMQHYVE 142
>gi|167561620|ref|ZP_02354536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
EO147]
gi|167568856|ref|ZP_02361730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
C6786]
Length = 457
Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGALTAGASDIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
L+ + K + +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265
>gi|330797004|ref|XP_003286553.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum]
gi|325083458|gb|EGC36910.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum]
Length = 395
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R+ + + L+ C + C +C E + Q+ +L++++ + + ++ FT
Sbjct: 76 RHHTYLRISLIDTCNLKCLYCHPEEGFIKQQQDKLLTAEEIIRLSKLFVS-AGVNKIRFT 134
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
GG+PL+ K + K+++ + IK ++ + +
Sbjct: 135 GGEPLV--RKEIDKIIEEVGKIKGIEKIGITT 164
>gi|282865955|ref|ZP_06275004.1| Radical SAM domain protein [Streptomyces sp. ACTE]
gi|282559279|gb|EFB64832.1| Radical SAM domain protein [Streptomyces sp. ACTE]
Length = 364
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 27/152 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VIFTGGD 153
+LL L CP+ C C TV + D + ++ + V+ TGG+
Sbjct: 17 LLLGLTRRCPLSCAHCS-----TGSDPTVREAPDAGRLVRFVGSFTSENRPDVVMLTGGE 71
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQR---INPELIQCLKEAGK-P 206
PL+L +++ L + R SR + + R I +++ +
Sbjct: 72 PLLLP-----GLVEELSALAR----RAGSRTALLSGMFFARSRHIPAPILRAITGVDHFS 122
Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237
+ +H H E + A+ R+ AG+ +
Sbjct: 123 ASLDVH--HEREVGRADVFRALHRIREAGVAV 152
>gi|114617057|ref|XP_519489.2| PREDICTED: leucine zipper protein 5 isoform 10 [Pan troglodytes]
gi|114617059|ref|XP_001150332.1| PREDICTED: leucine zipper protein 5 isoform 7 [Pan troglodytes]
gi|114617061|ref|XP_001150466.1| PREDICTED: leucine zipper protein 5 isoform 9 [Pan troglodytes]
gi|114617063|ref|XP_001150190.1| PREDICTED: leucine zipper protein 5 isoform 6 [Pan troglodytes]
Length = 1143
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ + L+ G ++IH H F E +S L +
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 908 RSLGIMQTVKG 918
>gi|114617075|ref|XP_001150126.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
Length = 1156
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ + L+ G ++IH H F E +S L +
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 908 RSLGIMQTVKG 918
>gi|167643994|ref|YP_001681657.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
sp. K31]
gi|229890472|sp|B0T155|MIAB_CAUSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|167346424|gb|ABZ69159.1| RNA modification enzyme, MiaB family [Caulobacter sp. K31]
Length = 450
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 15/121 (12%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +E+ D + + G+ L + C +C FC G +
Sbjct: 136 DFAADEKFDALPAERQ--VSGVS------AFLTVQEGCDKFCTFCVVPYTRGGE--WSRP 185
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK---RLQKVLKTLRYIKHVQILRFHSRV 184
+ E + + EV G + + L ++++ L I + +R+ +
Sbjct: 186 PEQIEDEARRL-ADQGVREVTLLGQN-VNAYDGGGYTLARLVRRLAKIPGLDRIRYTTSH 243
Query: 185 P 185
P
Sbjct: 244 P 244
>gi|170720721|ref|YP_001748409.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida W619]
gi|169758724|gb|ACA72040.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
W619]
Length = 322
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+
Sbjct: 15 VSLTAACNYACSYCVPNGKRLVAAQDE--LSAEALARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182
RL L + ++ +Q + +
Sbjct: 73 SP--RLNAFLAAVAKLE-LQDITLTT 95
>gi|91776646|ref|YP_546402.1| molybdenum cofactor synthesis-like protein [Methylobacillus
flagellatus KT]
gi|91710633|gb|ABE50561.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
Length = 343
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 26/198 (13%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+P P+ + ++P ++ ++ R+ L + C C +C +MV + VL
Sbjct: 1 MPGLNSRPMPSSAYTPE--LIDQFGRRVDYIRLSITDRCDFRCVYCMGDDMVFLPREDVL 58
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVP 185
S ++ + + +V TGG+PL+ + L + + L ++ + + S++
Sbjct: 59 SLEECARLVRTF-VTLGVSKVRITGGEPLVRKNALTLFQEVGRLPGLRELTMTTNGSQL- 116
Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAI--------AAISRLANAGII 236
+R + LK+AG + I++ + P F + I +AG
Sbjct: 117 ----ERYAHD----LKKAGLSRINISMDSLDPERFRKITRVGDLDKVLRGIQAAKDAGFT 168
Query: 237 -LLSQSVLLKGINDDPEI 253
+ +VL++GIND I
Sbjct: 169 HIKLNTVLMRGINDTEAI 186
>gi|150016055|ref|YP_001308309.1| radical SAM domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149902520|gb|ABR33353.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 343
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDP 154
+ CP C FC + + G V +S Y I+ K+ E+ F GG
Sbjct: 10 IFVPHEGCPHNCVFCNQDRITGVDDEEVTASSVITTINDYLETIKNKNATIEISFFGGTF 69
Query: 155 LILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ ++ +++LK + K + +R +R P IN ++ LKE G +
Sbjct: 70 TGIREEKQRELLKVAKEFKEKGLIDKIRLSTR-----PDYINDYILTYLKEYGVDII 121
>gi|150391787|ref|YP_001321836.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
metalliredigens QYMF]
gi|167011809|sp|A6TVF9|MOAA_ALKMQ RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|149951649|gb|ABR50177.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
metalliredigens QYMF]
Length = 320
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + +C + C++C + + +L+ ++ E + I ++ I +V TGG+PL+
Sbjct: 14 ISITDLCNLRCQYCMPEKGIYKKTHQDILTLEEIEQIVR-IGAENGINKVRITGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
K + ++K + I +Q +
Sbjct: 72 -RKGVIGLIKNISNIPGIQDI 91
>gi|294496381|ref|YP_003542874.1| radical SAM protein [Methanohalophilus mahii DSM 5219]
gi|292667380|gb|ADE37229.1| Radical SAM domain protein [Methanohalophilus mahii DSM 5219]
Length = 396
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQ 139
N + R P+ + ++ C C C G ++ T K + AL
Sbjct: 84 NAEVQHALGRRVPETVSFEITRQCKCNCDHCIIS---GGEEDIDTETVKKTIDDALD--- 137
Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQ 198
+ +IFT GDPL+ + + + Y+ + + V + P +NP+ +
Sbjct: 138 --MGAFIIIFTEGDPLLRED-----IFELIDYVDKERAI-----VNMYTPGTDMNPQTAR 185
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
LK+AG + + E A+ RL A
Sbjct: 186 KLKQAGLHNLLVSIYST----DPEKHNAVRRLEGA 216
>gi|291532427|emb|CBL05540.1| Radical SAM superfamily [Megamonas hypermegale ART12/1]
Length = 130
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ C ++C C+R G + L++++ + L I + + +IF+GG+PL+
Sbjct: 7 TTNACNMFCDHCYRDA--GCKADEELNTQEAKTLLEQIAK-AGFKIMIFSGGEPLMRPD 62
>gi|300023006|ref|YP_003755617.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524827|gb|ADJ23296.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans
ATCC 51888]
Length = 386
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 51/279 (18%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
E+ L + DP+ + G+ L +L H CP+ C +C + + T
Sbjct: 2 NEIAPLEQFSPDPVAEVCARAPVGL--------LAELTHRCPLQCPYCS-NPLELDRVNT 52
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
L++ + + + + I ++ +GG+P + L+ ++ ++
Sbjct: 53 ELTTAEWQDVMRQ-AAELGILQIHLSGGEPTLRKD--LEDIVDVAAKAG------LYT-N 102
Query: 185 PIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------- 229
I + + ++ L++ G V ++I + + +S
Sbjct: 103 LITAGVTLTEDRLKKLQDLGLDHVQLSI-----QDVDDANAERMSAYKGGLAKKREVGKW 157
Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSH 282
+ G+ L + + + + E L N++ VE+ YY A
Sbjct: 158 VRKLGMPLTINAPIHRF---NIENLPNIIDFAVEMGAGRIEVANIQYYAWALKNRASLMP 214
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
R + + +IV KE++ G+ +++ P Y K
Sbjct: 215 TRAQVIKSAEIVEEAKERLKGILVFDFVV--PDYYAKTP 251
>gi|239815326|ref|YP_002944236.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
S110]
gi|239801903|gb|ACS18970.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
S110]
Length = 383
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ + ++ TGG+
Sbjct: 47 ISVTDRCNFRCSYCMPKDVFDKDYQYLPHSALLSFEEMTRLARLFAAH-GVRKIRLTGGE 105
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++ ++ L I
Sbjct: 106 PLL--RKNIEALIAQLSEI 122
>gi|254446032|ref|ZP_05059508.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
DG1235]
gi|198260340|gb|EDY84648.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
DG1235]
Length = 427
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 40/121 (33%), Gaps = 9/121 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R LK+ C C FC E A + + I E++ TG +
Sbjct: 129 QRANLKIQDGCSFVCSFCII-PFARGAARAREMGNLLEEARQ--KAEQGIREIVITGVNI 185
Query: 155 LILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K L KVL+ L ++ + +R S P P EL + + + H
Sbjct: 186 GTYDTKGGGLLKVLEGLNAVEGIDRIRISSIEPTTIP----TELFGLMNDPQHALLPFFH 241
Query: 213 A 213
Sbjct: 242 I 242
>gi|166030899|ref|ZP_02233728.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
27755]
gi|166029166|gb|EDR47923.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
27755]
Length = 440
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
+K+ C +C +C ++ G+ + +V K A + E+I
Sbjct: 146 AYMKIAEGCDKHCTYCIIPKLRGNYR-SVPMEKLLAEAKD--LADQGVKELILVAQETTV 202
Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + K L K+L+ L I +Q +R P+ I ELIQ +KE K
Sbjct: 203 YGKD--LYGEKSLHKLLRELCKISGIQWIRI----LYCYPEEIYDELIQTIKEENK 252
>gi|317181628|dbj|BAJ59412.1| hypothetical protein HPF57_0338 [Helicobacter pylori F57]
Length = 418
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + K E + + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
R + +++K L I ++ +R S
Sbjct: 190 VGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|256828468|ref|YP_003157196.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577644|gb|ACU88780.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 292
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 97 ILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+L+++ CP C FC +R +S + AA + + + GD
Sbjct: 17 VLIRVADGCPHNSCAFCAMYRGIPYRVHDQETISRRVALAA----AQHPEARRIFLADGD 72
Query: 154 PLILSHKRLQKVLKTLR 170
L L + L+ +L R
Sbjct: 73 ALALPAQLLEMILTQAR 89
>gi|145299699|ref|YP_001142540.1| molybdenum cofactor biosynthesis protein A [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852471|gb|ABO90792.1| molybdenum cofactor biosynthesis enzyme A [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 366
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 17/161 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + + LS + ++ +V TGG+P +
Sbjct: 57 LSVTDVCNFRCTYCLPDGYRPEGRKSFLSLDEIRRIVSGFAAMGT-RKVRLTGGEPSLRR 115
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
+++T+ ++ + + R+ + + +++ + P +
Sbjct: 116 D--FTAIIETVANTPGIEKV-----AMTTNGYRLKERAREWFDAGLTALNVSVDSLDPRQ 168
Query: 219 FS--------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
F E + I AG + +VLLKG+ND
Sbjct: 169 FHQITGENKLAEVMDGIEAALAAGFKSVKINAVLLKGLNDH 209
>gi|158521512|ref|YP_001529382.1| radical SAM domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510338|gb|ABW67305.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
Length = 341
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 25/160 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ CP C FC + + G + L Y + ++ F GG+ L
Sbjct: 12 VFLPHAGCPHRCVFCDQDAITGQKASLTADDLHDHVHRYLQYRGDNRGHAQIAFYGGNFL 71
Query: 156 ILSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
L + L ++L + VQ +RF +R P I + + LK+
Sbjct: 72 GLERESLTQMLHAASAFVDQGLVQAIRFSTR-----PDTITQKNLDLLKDYPVTTVEVGV 126
Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQ 240
H E ++ AA+ L AG +Q
Sbjct: 127 QSMDDRVLEKARRGHTAE---QSTAALLLLKQAGYETGAQ 163
>gi|15898384|ref|NP_342989.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2]
gi|284174114|ref|ZP_06388083.1| Heme biosynthesis related protein [Sulfolobus solfataricus 98/2]
gi|13814795|gb|AAK41779.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2]
gi|261602951|gb|ACX92554.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2]
Length = 394
Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ + +P+ L + EE ++ ++ + + L L + C C +CF++
Sbjct: 33 LRKGVVPEH--LKDIIEEGFSATDEDLDEEIEKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
G +K +S K T + YI++ + +V T GG+P IL ++++++ + L +K
Sbjct: 91 ---GFRKNISVSDKVTRGFVNYIRKNEKGRKVRVTYFGGEP-ILQLRKIEEISRELSDLK 146
>gi|329928802|ref|ZP_08282641.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp.
HGF5]
gi|328937445|gb|EGG33866.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp.
HGF5]
Length = 377
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGG---D-PL 155
++C V+CRFC GS +G VLS E IQE + E++ GG D P
Sbjct: 62 TNICDVFCRFCAFYRRPGSSEGYVLSD---ETIFQKIQETEDVNGTEILMQGGVNPDLPF 118
Query: 156 ILSHKRLQKVLKTLRYI 172
L+ + K I
Sbjct: 119 NYYTDLLRNIKKRFPSI 135
>gi|312622876|ref|YP_004024489.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203343|gb|ADQ46670.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor
kronotskyensis 2002]
Length = 314
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C +C +C +++ + LS ++ ++ ++ I ++ T
Sbjct: 12 SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 69
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + + ++++ I ++ + + ++ + +K K V I+
Sbjct: 70 GGEPFLRDD--IVEIIEFAHSIG-IENINITT---NGW--LDTEKIKKIIKSPLKSVNIS 121
Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248
+ + + + AI L + ++ +VL++ +N
Sbjct: 122 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 166
>gi|254719054|ref|ZP_05180865.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
gi|265984046|ref|ZP_06096781.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
gi|306838976|ref|ZP_07471798.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653]
gi|264662638|gb|EEZ32899.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
gi|306405943|gb|EFM62200.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653]
Length = 344
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 41/173 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKHVQ---------------ILRF-------HSRVPIVDPQRINPEL 196
K + ++ L H++ + RF R V +NPE
Sbjct: 86 RKNIMHLIGNLSR--HLKSGALDELTLTTNGSQLARFAGELADCGVRRINVSLDTLNPEK 143
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ + G + I AGI + +V LK ND
Sbjct: 144 FRTITRWGD--------------LPRVLEGIDAARKAGIHVKINAVALKDFND 182
>gi|121551156|gb|ABM55768.1| MiaB [Pasteuria ramosa]
Length = 361
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 34/202 (16%)
Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
++ +K I Y P + L HN I R +P E +E +
Sbjct: 2 AQEEVVVKRILQKY-----PYVDLLFGTHN----IHR--LPYLLEDAYFNKEIVVEVWSR 50
Query: 82 NHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
++ I D R + +++ C +C +C + S+ E + I+
Sbjct: 51 EGEIVEQIPRLRHDQLRAFVNIMYGCDKFCTYC-----IVPYTRGKERSRQPEDIIEEIK 105
Query: 140 EKSQ--IWEVIFTGGDP-LILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ ++ EV G + RL +L L I ++ +RF + P+
Sbjct: 106 QLAEQGYQEVTLLGQNVNAYGKDFDKFPYRLSNLLDDLSKI-NISRVRFTTSH----PKD 160
Query: 192 INPELIQCLKEAGKPVYIAIHA 213
+ ELI L + G + H
Sbjct: 161 CDDELINVLAKRGN---LVEHF 179
>gi|158317474|ref|YP_001509982.1| radical SAM domain-containing protein [Frankia sp. EAN1pec]
gi|158112879|gb|ABW15076.1| Radical SAM domain protein [Frankia sp. EAN1pec]
Length = 414
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE-----VI 148
I+LK+ C + C +C+ Q+ +S EA + ++ E +I
Sbjct: 39 IVLKINSRCNLSCTYCYVYHQADQNWRQQPVTMSPAVVEATARRLAAHAKTHELPWMQII 98
Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ H L+ V + L
Sbjct: 99 LHGGEPLLAGHDHLRNVAERLLA 121
>gi|331001874|ref|ZP_08325395.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412197|gb|EGG91591.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon
107 str. F0167]
Length = 440
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 27/161 (16%)
Query: 97 ILLKLLHVCPVYCRFCFR-----REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
LK+ C C +C + +KD A I+E + E
Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPMDDLITQAKDL--AAQGIKELILVAQETTLY 203
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
G D + K L K+LK L + ++ +R P+ I ELI + K Y+
Sbjct: 204 GVD--LYGEKTLPKLLKELAKVSGIEWIRI----LYCYPEEITDELIDVIANEEKVCKYL 257
Query: 210 AIHANHP-----YEFS-----EEAIAAISRLANA--GIILL 238
I H + ++ ++ I +L GI L
Sbjct: 258 DIPIQHASDNILRRMARRTTHDDLVSIIGKLRKNIPGITLR 298
>gi|288926768|ref|ZP_06420678.1| probable arylsulfatase-activating protein AslB [Prevotella buccae
D17]
gi|288336449|gb|EFC74825.1| probable arylsulfatase-activating protein AslB [Prevotella buccae
D17]
Length = 407
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154
+ C + C++C+ + + + V+S + E YIQ ++ + +V+FT GG+P
Sbjct: 18 VGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 76
Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L+ + L K + R I + + + + E + KE
Sbjct: 77 LM---RPLSFYRKAVALQERYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 124
Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249
V I+ + P EF +E + I L G+ + +V +ND
Sbjct: 125 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 175
>gi|168213427|ref|ZP_02639052.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens CPE str. F4969]
gi|170714976|gb|EDT27158.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens CPE str. F4969]
Length = 169
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ C C CF + +D + + + + I V F+GGDPL
Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77
>gi|110803994|ref|YP_699759.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens SM101]
gi|110684495|gb|ABG87865.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens SM101]
Length = 169
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ C C CF + +D + + + + I V F+GGDPL
Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77
>gi|110799332|ref|YP_697190.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens ATCC 13124]
gi|168205763|ref|ZP_02631768.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens E str. JGS1987]
gi|168209741|ref|ZP_02635366.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens B str. ATCC 3626]
gi|168217620|ref|ZP_02643245.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens NCTC 8239]
gi|169343291|ref|ZP_02864301.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens C str. JGS1495]
gi|182624305|ref|ZP_02952090.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens D str. JGS1721]
gi|110673979|gb|ABG82966.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens ATCC 13124]
gi|169298589|gb|EDS80670.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens C str. JGS1495]
gi|170662721|gb|EDT15404.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens E str. JGS1987]
gi|170712105|gb|EDT24287.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens B str. ATCC 3626]
gi|177910523|gb|EDT72896.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens D str. JGS1721]
gi|182380292|gb|EDT77771.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens NCTC 8239]
Length = 169
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ C C CF + +D + + + + I V F+GGDPL
Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77
>gi|325925005|ref|ZP_08186428.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
gi|325544589|gb|EGD15949.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
Length = 343
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 13/108 (12%)
Query: 78 IGDNNHSPLKGIVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKD 130
+ D +P + RY P R L L ++ C C +C + V G LS
Sbjct: 6 LPDLATAP---MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQ 62
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
E + + +V TGG+PL+ L ++ L I+ ++ L
Sbjct: 63 LETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLAAIEGIEDL 107
>gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
Length = 345
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 38/203 (18%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVI 148
+ + + CP CRFC ++ G + E YIQ E +I V+
Sbjct: 100 NTLCVSTQVGCPAGCRFCL-----TAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVV 154
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-P 206
F G G+PL L+ ++K + + H +L +R V I P + + KE K
Sbjct: 155 FMGMGEPL-LNFDNVKK---AVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVK 210
Query: 207 VYIAIHANHPYEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEI 253
+ +++HA E E +AA+ R A+ ++ + V+LKG+ND E
Sbjct: 211 LAVSLHATT-DEVRNMLVPLNRKYPIGEIMAALRRYPADNNRRIMIEYVMLKGVNDSLED 269
Query: 254 LANLMRTFVELRIK-------PY 269
L++ + +K PY
Sbjct: 270 ARRLVKLVKGIPVKVNLIPFNPY 292
>gi|191170321|ref|ZP_03031874.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
gi|190909129|gb|EDV68715.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
Length = 419
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|89900261|ref|YP_522732.1| molybdenum cofactor biosynthesis protein A [Rhodoferax
ferrireducens T118]
gi|89344998|gb|ABD69201.1| GTP cyclohydrolase subunit MoaA [Rhodoferax ferrireducens T118]
Length = 388
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ + ++ TGG+
Sbjct: 52 ISVTDRCNFRCNYCMPKEIFDKDYAYLPHKALLSFEEITRIAKVFVAH-GVQKIRLTGGE 110
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++++++ L +
Sbjct: 111 PLL--RKNIERLIEQLAAL 127
>gi|238919809|ref|YP_002933324.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
gi|238869378|gb|ACR69089.1| coproporphyrinogen III oxidase-like protein, putative [Edwardsiella
ictaluri 93-146]
Length = 460
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 41/238 (17%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRY--PD 95
+TP +A A + IP E +P + P+ + + + R P+
Sbjct: 5 ITPYLA------------AAEGIPFPERWATMPWRHQQPLPADALTQGWQQLCQRTLPPN 52
Query: 96 RILLKL-LHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ L+ + + C +C FC ++ + + D E+AL +Q+ + I +
Sbjct: 53 KRLVYVHIPFCATHCTFCGFYQNRFSEQAIARYFDYLQREIDLESALP-LQQSAPIHAIY 111
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEAGK 205
GG P L+ ++L +++ LR + + + RV D RI+ CL
Sbjct: 112 LGGGTPSALNAEQLHRLIVQLRSLLPLAADCEITVEGRVLNFDDARID----ACLAAGAN 167
Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI--NDDPEILANLMRTF 261
I I F + R A+ + L+ + D ++ +LM
Sbjct: 168 RFSIGIQT-----FDTHLRQRMGRRADRDRAI----AFLRALAERDRAAVICDLMFGL 216
>gi|313619543|gb|EFR91216.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
S4-378]
Length = 120
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G VH Y I + + C + C +C E + VLS + + + + K I +
Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V TGG+PL+ + + ++++ L I ++ + +
Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITT 98
>gi|311031621|ref|ZP_07709711.1| ribosomal protein S12 methylthiotransferase [Bacillus sp. m3-13]
Length = 454
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
R LK+ C +C FC G ++ S+D + + Q+ + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVTQAQQLVDAGYKEIVLTG 196
Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +L+ L ++ ++ +R S ++ +I E+I+ L +
Sbjct: 197 IHTGGYGED---MKDYNFAMLLRELDEKVEGLKRIRISS----IEASQITDEVIEVLNNS 249
Query: 204 GKPVYIAIHA 213
K + +H
Sbjct: 250 DK-IVRHLHI 258
>gi|325849067|ref|ZP_08170559.1| radical SAM domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480312|gb|EGC83375.1| radical SAM domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 358
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154
+ CP C FC + + + K ++ K + L+Y E+ F GG
Sbjct: 10 IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67
Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
L + L+ K + +R +R P IN ++ LK+ V
Sbjct: 68 FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122
Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240
++AN H E ++I A + G L Q
Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161
>gi|281423817|ref|ZP_06254730.1| translation initiation factor IF-1 [Prevotella oris F0302]
gi|299141169|ref|ZP_07034306.1| translation initiation factor IF-1 [Prevotella oris C735]
gi|281402044|gb|EFB32875.1| translation initiation factor IF-1 [Prevotella oris F0302]
gi|298577129|gb|EFI48998.1| translation initiation factor IF-1 [Prevotella oris C735]
Length = 72
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +IV ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|237817558|ref|ZP_04596548.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
str. 2308 A]
gi|237787313|gb|EEP61531.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
str. 2308 A]
Length = 474
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD L Y+ +I
Sbjct: 70 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 120
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212
>gi|94969171|ref|YP_591219.1| hypothetical protein Acid345_2144 [Candidatus Koribacter versatilis
Ellin345]
gi|123381489|sp|Q1IPQ5|RIMO_ACIBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|94551221|gb|ABF41145.1| SSU ribosomal protein S12P methylthiotransferase [Candidatus
Koribacter versatilis Ellin345]
Length = 504
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 37/151 (24%)
Query: 97 ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+K+ C C FC FR +V++ + A K + E+
Sbjct: 206 AYIKVAEGCDHPCSFCIIPQLRGKFRSRRF----ESVVAEAERLA-------KQGVKEIT 254
Query: 149 FTGGDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D L L L ++L+ L I+ +Q +RF P +I L+Q + +
Sbjct: 255 LIGQDTTCYGEDLGLKDG-LAQLLERLAQIEELQWVRF----LYAYPNKITKRLLQTIAD 309
Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLAN 232
K P Y+ + H A + R+
Sbjct: 310 NPKIPKYMDVPLQH------SAANVLKRMKR 334
>gi|294637137|ref|ZP_06715446.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC
23685]
gi|291089671|gb|EFE22232.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC
23685]
Length = 329
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 42/225 (18%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + VC C +C + LS + +V TGG+P +
Sbjct: 18 LSVTDVCNFRCTYCLPDGYRPASHEAKRFLSLDEIRRVSRAFAALGT-EKVRLTGGEPTL 76
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
++ +R ++ L + R+ ++ ++AG I + +
Sbjct: 77 RRD--FCDIIAAVRENPGIKTL-----AVTTNGYRMARDVAAW-RQAGLS-AINVSVDSL 127
Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
H + E A I AG + +VL++ +ND +L
Sbjct: 128 DARQFHA--ITGEDRFAQVMAGIDAAFAAGFERIKVNTVLMRDVND-----QSLNAFLHW 180
Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
+R +P EG + + +SG
Sbjct: 181 IRHRP---IQMRFIELME-----TGEGSDLFR--RHHVSGELIRR 215
>gi|265766970|ref|ZP_06094799.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
gi|263253347|gb|EEZ24823.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
Length = 439
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277
>gi|256751164|ref|ZP_05492045.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749889|gb|EEU62912.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 435
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 89 IVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQI 144
++ + +I L + C + C +CF + T ++ E + ++ +
Sbjct: 42 LISKKRGKINYITLYITDKCNLACTYCFNKTNNEKVTYTFFPERNIEKIIEFLKRTDIHF 101
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR 170
+ F GG+PL L + ++K+LK +
Sbjct: 102 VTIRFFGGEPL-LEIEYIEKILKYIE 126
>gi|253566270|ref|ZP_04843724.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945374|gb|EES85812.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|301164592|emb|CBW24151.1| conserved hypothetical protein [Bacteroides fragilis 638R]
Length = 439
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277
>gi|60683077|ref|YP_213221.1| hypothetical protein BF3627 [Bacteroides fragilis NCTC 9343]
gi|60494511|emb|CAH09308.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 439
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277
>gi|53715140|ref|YP_101132.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
gi|52218005|dbj|BAD50598.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
Length = 439
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277
>gi|18311485|ref|NP_563419.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Clostridium perfringens str. 13]
gi|18146169|dbj|BAB82209.1| probable anaerobic ribonucleoside-triphosphate reductase activating
protein [Clostridium perfringens str. 13]
Length = 169
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R+ C C CF + +D E + + + I V F+GGDPL
Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIEELIKDLADNPFIDGVTFSGGDPL 77
>gi|148251870|ref|YP_001236455.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1]
gi|146404043|gb|ABQ32549.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1]
Length = 471
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 31/171 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
L+++ C + C CF Q+ E L + + + + V +GG+P
Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRSHFTPLATVERMLDALVKSEGEPDLVQISGGEPT 160
Query: 156 ILSH--KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
+ L V R I+HV I LR R P + + L E + + +
Sbjct: 161 LHPDFFDILAAV--RARPIRHVMINTNGLRIA-REP---------DFVAKLAETKRGLEV 208
Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + A+ L + GI + + +G+NDD
Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLEHQGISTTLVATIKRGVNDD 259
>gi|304437610|ref|ZP_07397565.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369423|gb|EFM23093.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 331
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + CR+C V + VL+ ++ + + + +V TGG+PL+
Sbjct: 14 VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRVLAA-LGVRKVRLTGGEPLVR 72
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ ++++ L+ I ++ + + ++ + EL+
Sbjct: 73 RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110
>gi|83590093|ref|YP_430102.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83573007|gb|ABC19559.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 335
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 39/208 (18%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C +YC C+R G++ L++ + + K+ +IF+GG+PL+
Sbjct: 7 TTNQCNLYCDHCYRDA--GARVEDELTTAEAGNLIDE-AAKAGFRIMIFSGGEPLLRPD- 62
Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
L +++ + LR S + + EL + LK AG V I++ + P
Sbjct: 63 -LPELVSRAAA----RGLRPVLGSNGTL-----LTTELARELKAAGALAVGISLDSCDPA 112
Query: 218 EFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
A+A ++ AG+ + + D+ E L +L VEL
Sbjct: 113 RHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLA---VELGAVA 169
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
++ F + I A
Sbjct: 170 HHFF----------FLVPTGRAASIEAE 187
>gi|330445221|ref|ZP_08308873.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489412|dbj|GAA03370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 474
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 27/140 (19%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
E+ D + + + ++ C YC +C V S+ +
Sbjct: 134 EKFDSLPEPRAEGA---------TAFVSIMEGCSKYCTYC-----VVPYTRGEEVSRPLD 179
Query: 133 AALAYIQEKSQ--IWEVIFTGGDP----LILSHKRLQ---KVLKTLRYIKHVQILRFHSR 183
L I + ++ + EV G + ++ + ++L+ + I + +R+ +
Sbjct: 180 DVLFEIAQLAEQGVREVNLLGQNVNAYRGVMHDGEIASFAELLRLVAAIDGIDRIRYTTS 239
Query: 184 VPIVDPQRINPELIQCLKEA 203
PI ++I+ K+
Sbjct: 240 HPI----EFTDDIIEVYKDT 255
>gi|145321187|gb|ABP63662.1| molybdenum cofactor biosynthesis protein A [Achromobacter sp. SY8]
Length = 364
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152
+ ++ C C +C RE+ G+ + +L+ + E A A+I+ + ++ +GG
Sbjct: 42 ISVIDQCNFRCTYCMPREVFGADYPFLRRDELLTFDELERTARAFIRL--GVRKIRLSGG 99
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAG-KPV 207
+PL+ L+ ++ L +++ PI N L+ L AG + +
Sbjct: 100 EPLLRKD--LEHLVAQLA-----RLVTLAGE-PIDLAMTTNGALLARKAHVLAAAGLRRL 151
Query: 208 YIAIHANHPYEFS---------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
+++ A P F+ + + I+ +AGI + V+ +G+NDD
Sbjct: 152 NVSLDALAPATFARIANTSASVGDVLDGIATAHDAGIRHIKINMVVQRGVNDD 204
>gi|158320272|ref|YP_001512779.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
gi|158140471|gb|ABW18783.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
Length = 433
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 19/127 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C YC +C G + ++ E + EV+ TG
Sbjct: 141 KTRAFLKIQEGCNQYCTYCIIPYARGPIRSRGPLEIVEEVETLVQ-----KGFKEVVLTG 195
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
R L +LK + + ++ +R S ++P + ++ L + K
Sbjct: 196 IHVASYGKDRSDGTDLIHILKQVNGAQGLERIRLSS----LEPTLFTDDFLRELSQLDK- 250
Query: 207 VYIAIHA 213
I H
Sbjct: 251 --ICDHF 255
>gi|83589960|ref|YP_429969.1| tRNA-i(6)A37 modification enzyme MiaB [Moorella thermoacetica ATCC
39073]
gi|123725725|sp|Q2RJG3|MIAB_MOOTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|83572874|gb|ABC19426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moorella thermoacetica
ATCC 39073]
Length = 444
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 88/284 (30%), Gaps = 77/284 (27%)
Query: 41 PVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RIL 98
P + L+ N Q +PQ E +G+ ++ + R +
Sbjct: 101 PYVDLLLGTGN------LQELPQLIEEIKAMHRPRIVVGEQEGPVVEDLPRRRARGAQAF 154
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY--IQEKSQIWEVIFTGGDP 154
+ + + C +C +C + G ++ + K+ + + I+ V G D
Sbjct: 155 VTITYGCNNFCTYCIVPYVRGRERSRRPENIIKEVKELVDQGVIEVTLLGQNVNSYGRD- 213
Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L +L+ + ++ ++ +R+ +
Sbjct: 214 --LRDGINFAGLLERVNAVEGLKRIRYVT------------------------------- 240
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
+HP +F+ E + ISRL + + G N + LM Y
Sbjct: 241 SHPRDFTPELVTTISRLDKVCEHV--HLPVQAGSNR----ILELMHRG--------YT-- 284
Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
H+ ++VA L+ I G+ I+ PG
Sbjct: 285 ------REHY-------LELVADLRRHIPGISLTTDLIVGFPGE 315
>gi|257792110|ref|YP_003182716.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
gi|257476007|gb|ACV56327.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
Length = 435
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 60/177 (33%), Gaps = 22/177 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156
L C C FCF + + + + ++ V TGG+PL+
Sbjct: 89 FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147
Query: 157 LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209
+ + ++ H+++ ++ L+ L++AG + I
Sbjct: 148 HADESVMFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199
Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
+ E ++A+ ++R ++ + ++ G E + L+ ++
Sbjct: 200 DVFDVDRADEIIDDAVDVLARAKRFIPQVMMEMPVIPG---TGEAMRRLLDRLDQVG 253
>gi|157163980|ref|YP_001466045.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
13826]
gi|166217240|sp|A7ZB87|MOAA_CAMC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|112801191|gb|EAT98535.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
13826]
Length = 322
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 24/176 (13%)
Query: 89 IVHRYPDRIL----LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ +Y R++ + + C CR+C + K +L+ ++ +
Sbjct: 2 LIDKY-GRVVDYLRISVTQRCNFRCRYCMPTTPFSWTPKENLLTFEEL-FLFVKVAIDEG 59
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ ++ TGG+PL+ L +K + K L + + P + LK+A
Sbjct: 60 VKKIRITGGEPLVRKD--LDVFIKMISDYKPDIDLALTTNGF------MLPHFAKRLKDA 111
Query: 204 G-KPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
G K + ++ E +A +AG+ + +V LKG NDD
Sbjct: 112 GLKRINMSLDTLNEQKAKFIAQKSVLHEVLAGFEAALDAGLKVKINTVALKGFNDD 167
>gi|91773564|ref|YP_566256.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
6242]
gi|91712579|gb|ABE52506.1| Radical SAM protein with Cobalamin (vitamin B12)-binding domain
[Methanococcoides burtonii DSM 6242]
Length = 487
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
P +N+ D HS YP + CP C FC V
Sbjct: 194 FPALHLMNLEHYFGLDMSHGKRHSK-----RFYP----IITSRGCPAKCTFCT-AYRVWG 243
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
+K S ++ + Y++EK I E++ D + KR +K+
Sbjct: 244 RKYRHRSPENVIEEMKYVKEKYNIEELLIE-DDNFTANPKRAEKICD 289
>gi|127514616|ref|YP_001095813.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica
PV-4]
gi|126639911|gb|ABO25554.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica
PV-4]
Length = 328
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 37/171 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
L + C C +C + + VLS ++ LA+I + + + ++ TGG+PL
Sbjct: 17 LSVTDRCDFRCVYCMSEDPCFLDREQVLSLEE----LAWIGQAFTELGVKKIRLTGGEPL 72
Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200
+ + +L K+L L +K + + SR+ + + PEL L
Sbjct: 73 VRTDCDQLVKLLGQLPGLKELSMTTNGSRLSKFAGKMHEAGLSRLNISLDTLKPELFTQL 132
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
G E I I AG + +V+L+G NDD
Sbjct: 133 TRNGN--------------LERVIQGIDAAKAAGFNRIKINAVILRGQNDD 169
>gi|212637405|ref|YP_002313930.1| Radical SAM [Shewanella piezotolerans WP3]
gi|212558889|gb|ACJ31343.1| Radical SAM [Shewanella piezotolerans WP3]
Length = 294
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 35/167 (20%)
Query: 97 ILLKLLHVCPVY-CRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
++L++ + C C FC ++ + V + L ++ I V
Sbjct: 18 LILQVTNGCSWNQCSFCDMYTASQKRFRAQKIDKVE-----QELLKVSSSQAHISRVFLA 72
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGK 205
GD + L RL+++ ++ + V +R+ P+ I PE +Q L+E G
Sbjct: 73 DGDAMTLPFARLEEICLLIKKYLPSV------TRISSYCLPRNINNKTPEQLQRLRELGL 126
Query: 206 PVYI---------AIHANHPYEFSEEAIAAISRLANAGI----ILLS 239
+ + + E ++AA+ ++ AGI ++L+
Sbjct: 127 SLLYIGCESGDDEVLKRINKGETFASSLAALQKIKAAGIKSSVMILN 173
>gi|198276872|ref|ZP_03209403.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
gi|198270397|gb|EDY94667.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
Length = 438
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + + T+A A + +I GD
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVTQARQAAAEGGKEIVLTGVNIGD 207
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++K L ++ ++ R S ++P + E+I+ + ++ + H
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVAQSRR---FMPHF 260
>gi|170760017|ref|YP_001785664.1| radical SAM domain-containing protein [Clostridium botulinum A3
str. Loch Maree]
gi|169407006|gb|ACA55417.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 299
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 31/191 (16%)
Query: 99 LKLLHVCPVYCRFC-FRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--DP 154
+ + C C +C R E G V + K+ + K + VI TG DP
Sbjct: 28 MNIYKGCCHGCIYCDSRSECYGIDNFDKVRAKKNAIQIIKNELRKKRKKGVIGTGAMSDP 87
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFH----SRV-PIVDPQRINPELIQCLKEAGKPVYI 209
+ L +L + ++ + L F ++ +V + ++++ +K +
Sbjct: 88 YNPFEREL--MLTRM-ALEEINTLNFGAAIATKSNLVVR----DIDILKKIKTYSPTLVK 140
Query: 210 AIHANHPYEFSEEAI----------AAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256
H E ++ AI +L+ GI ILL +L IND+ E +
Sbjct: 141 ITITTHDDELCKKVEPNVCVTSKRFQAIKQLSYNGIFTGILL--MPILPFINDNGENIVK 198
Query: 257 LMRTFVELRIK 267
+++T E K
Sbjct: 199 IVKTAHECGAK 209
>gi|116753780|ref|YP_842898.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
gi|116665231|gb|ABK14258.1| Radical SAM domain protein [Methanosaeta thermophila PT]
Length = 383
Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 16/124 (12%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
+ + P +++ CP C +C+ E GS ++ + K+ L ++
Sbjct: 1 MQRKRPFHVMIIPTLGCPSKCSYCWSSEE-GSPVMSIDTVKEIVEWLKLFRDDPV--TFT 57
Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ----RINPELIQCLKEA 203
F GG+PL+ + +K L L + H+ P Q R+ PEL + LKE
Sbjct: 58 FHGGEPLLAGVEFYRKALPLLADGLSHL--------TPSFALQTNLWRLTPELAEVLKEY 109
Query: 204 GKPV 207
P+
Sbjct: 110 DVPI 113
>gi|296116145|ref|ZP_06834763.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
hansenii ATCC 23769]
gi|295977251|gb|EFG84011.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
hansenii ATCC 23769]
Length = 342
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 27/169 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C +M K +LS ++ E A + + + TGG+PL+
Sbjct: 22 VSVTDRCDMRCLYCMAEDMTFLPKPEILSYEELERICAAFI-HNGVRRIRVTGGEPLVRR 80
Query: 159 H-----KRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
+ + L+ + L SR+ E L AG + V I
Sbjct: 81 DVMSFFSAMGEWLRRPVDEPRLDELTLTTNGSRL---------GEFAIPLHAAGVRRVNI 131
Query: 210 AIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250
++ + P F+ + AG+ + +V + G+NDD
Sbjct: 132 SMDSLDPTRFATITRRGNLRKTLDGVRAAKEAGLKIRINAVAMAGLNDD 180
>gi|114617067|ref|XP_001149876.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
gi|114617069|ref|XP_001149952.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
gi|114617071|ref|XP_001150010.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
gi|114617073|ref|XP_001150070.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
Length = 644
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 245 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 298
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ + L+ G ++IH H F E +S L +
Sbjct: 299 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 351
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 352 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 408
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 409 RSLGIMQTVKG 419
>gi|329954832|ref|ZP_08295849.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
clarus YIT 12056]
gi|328526936|gb|EGF53947.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
clarus YIT 12056]
Length = 432
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + I V+ +R H P P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244
>gi|302348325|ref|YP_003815963.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
gi|302328737|gb|ADL18932.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
Length = 479
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGS 120
P E+L+ LP D + + ++ P RI + CP C +C G
Sbjct: 167 PFIEDLDKLPWPDRDLLDMDKYTLFN-----KPIRIAHVMASRGCPYGCMYCITSYYWGR 221
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ + + + Y+ + + E++FT D + + +++ + L+
Sbjct: 222 RYRYRSAKNVVDE-IEYLVNRYRAREIVFT-DDEFTANWRFVREFIAELKS 270
>gi|187925302|ref|YP_001896944.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
PsJN]
gi|229890466|sp|B2SYI5|MIAB_BURPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187716496|gb|ACD17720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
PsJN]
Length = 457
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L L + ++++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265
>gi|304314308|ref|YP_003849455.1| MoaA related protein [Methanothermobacter marburgensis str.
Marburg]
gi|302587767|gb|ADL58142.1| MoaA related protein [Methanothermobacter marburgensis str.
Marburg]
Length = 227
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I+ L C + CR+CF + + + L I + I V+ GG+P +
Sbjct: 14 IITVLTPTCNLRCRYCF---FTPRNCREYDAERIADRVLR-ISSEEGIDSVLIAGGEPTL 69
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183
L + + L HV I +R
Sbjct: 70 QRD--LPEFTEALSRDLHVTISTNGTR 94
>gi|297568775|ref|YP_003690119.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924690|gb|ADH85500.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 290
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 95 DRILLKLLHVC-PVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
D I+L++ C C FC +R E + +++ LA++ + +
Sbjct: 16 DSIILQVTVGCSHNRCTFCGTYRAEKFRLKDEATIAAD-----LAFVARHCRRQSRIFLA 70
Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRF 180
GD LIL +RL+++L+ +R V+ +R
Sbjct: 71 DGDVLILPQERLRRLLQDIRQQAPWVKRVRL 101
>gi|300022130|ref|YP_003754741.1| radical SAM protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299523951|gb|ADJ22420.1| Radical SAM domain protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 465
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 11/112 (9%)
Query: 69 ILPEEREDPIGDNN-HSPLKGIVHRY---PDRILLKLLHVCPVYCRFC--FRREMVGSQ- 121
++P P+G+++ G++ R+ + C +C FC +R +Q
Sbjct: 28 VMPWRDRRPLGEDDIADIWSGVLAECGPPRRRLAYIHVPFCANHCLFCGFYRNAYTPAQA 87
Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+++ + E A I+ I V GG P LS L ++++ +R
Sbjct: 88 ATYTDLLVAEIEREPGAAGIRHHP-IDAVYLGGGTPSALSASDLARIVEAVR 138
>gi|239827771|ref|YP_002950395.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
gi|239808064|gb|ACS25129.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
Length = 451
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + + + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG L +L+ L + ++ LR S ++ +I E+I+ L+ + K +
Sbjct: 200 GGYGTDLKDYSFAALLRDLDEQVVGLKRLRISS----IEASQITDEIIEVLQRSDK-IVR 254
Query: 210 AIHA 213
+H
Sbjct: 255 HLHI 258
>gi|254501345|ref|ZP_05113496.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
DFL-11]
gi|222437416|gb|EEE44095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
DFL-11]
Length = 486
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 24/123 (19%)
Query: 92 RYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
+ P L + C +C FC R V +++ AA S + EV
Sbjct: 174 KRPPAAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVTEAQRMAA-------SGVREV 226
Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQC 199
G G+ S L K+L+ L I + LR+ + P R ++ +LI+
Sbjct: 227 TLLGQNVNAYHGEAADGSTWGLGKLLRRLSEIDGLDRLRYTTSHP-----RDMDDDLIEA 281
Query: 200 LKE 202
+E
Sbjct: 282 HRE 284
>gi|29653907|ref|NP_819599.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
493]
gi|153208814|ref|ZP_01947041.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
Goat Q177']
gi|161830593|ref|YP_001596498.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
burnetii RSA 331]
gi|165919097|ref|ZP_02219183.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
334]
gi|212212941|ref|YP_002303877.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
burnetii CbuG_Q212]
gi|212218810|ref|YP_002305597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
burnetii CbuK_Q154]
gi|81629338|sp|Q83DX3|MIAB_COXBU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890502|sp|B6J853|MIAB_COXB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890503|sp|B6J1A4|MIAB_COXB2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890505|sp|A9NC58|MIAB_COXBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|29541170|gb|AAO90113.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii RSA 493]
gi|120575720|gb|EAX32344.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
Goat Q177']
gi|161762460|gb|ABX78102.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
331]
gi|165917231|gb|EDR35835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
334]
gi|212011351|gb|ACJ18732.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuG_Q212]
gi|212013072|gb|ACJ20452.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuK_Q154]
Length = 439
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
+ ++ C YC FC V S+ + +A + + + E+ G +
Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202
Query: 155 ----LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
++ + L ++ L + +++ +RF + P + LI E K +
Sbjct: 203 NDYRGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257
Query: 208 YIAIH 212
+H
Sbjct: 258 ANHLH 262
>gi|297250097|ref|ZP_06933798.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
bv. 5 str. B3196]
gi|297173966|gb|EFH33330.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
bv. 5 str. B3196]
Length = 458
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD L Y+ +I
Sbjct: 54 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 104
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196
>gi|113431887|emb|CAJ31889.1| putative oxydoreductase [Streptococcus thermophilus]
Length = 399
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
S G++ + +++ + + C + C +C+ ++ + + I K
Sbjct: 35 DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 90
Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+QI +I GG+P L+ + ++ L + +V +
Sbjct: 91 VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 127
>gi|55821919|ref|YP_140361.1| hypothetical protein stu1951 [Streptococcus thermophilus LMG 18311]
gi|55823837|ref|YP_142278.1| hypothetical protein str1951 [Streptococcus thermophilus CNRZ1066]
gi|55737904|gb|AAV61546.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55739822|gb|AAV63463.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 424
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
S G++ + +++ + + C + C +C+ ++ + + I K
Sbjct: 60 DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 115
Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+QI +I GG+P L+ + ++ L + +V +
Sbjct: 116 VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 152
>gi|62318012|ref|YP_223865.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
gi|83269988|ref|YP_419279.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
2308]
gi|189023264|ref|YP_001933005.1| coproporphyrinogen III oxidase [Brucella abortus S19]
gi|254691555|ref|ZP_05154809.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
gi|254695149|ref|ZP_05156977.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
gi|254698249|ref|ZP_05160077.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
86/8/59]
gi|254731692|ref|ZP_05190270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
gi|256256741|ref|ZP_05462277.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
gi|260544199|ref|ZP_05820020.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
abortus NCTC 8038]
gi|260757180|ref|ZP_05869528.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
gi|260759451|ref|ZP_05871799.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
gi|260762695|ref|ZP_05875027.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
86/8/59]
gi|260882988|ref|ZP_05894602.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
gi|261215505|ref|ZP_05929786.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
gi|62198205|gb|AAX76504.1| HemN-2, oxygen-independent coproporphyrinogen III oxidase [Brucella
abortus bv. 1 str. 9-941]
gi|82940262|emb|CAJ13327.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
biovar Abortus 2308]
gi|189021838|gb|ACD74559.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
abortus S19]
gi|260097470|gb|EEW81344.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
abortus NCTC 8038]
gi|260669769|gb|EEX56709.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
gi|260673116|gb|EEX59937.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
86/8/59]
gi|260677288|gb|EEX64109.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
gi|260872516|gb|EEX79585.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
gi|260917112|gb|EEX83973.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
Length = 450
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
D L + C C +C T ++ KD L Y+ +I
Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 96
Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
E+ F GG P I+ L ++ LR R + +DP+R+ P
Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149
Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
E+ L +G + + F + AI+R+ A L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188
>gi|322807650|emb|CBZ05225.1| putative SAM methylase domain protein [Clostridium botulinum H04402
065]
Length = 715
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151
+ L C + C++C+ V V+S + A+ YI + I VI F G
Sbjct: 22 VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78
Query: 152 GDPLI---LSHKRLQKVL 166
G+PL+ L K + ++
Sbjct: 79 GEPLLEIDLMDKIIDYIM 96
>gi|309781163|ref|ZP_07675900.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
5_7_47FAA]
gi|308919984|gb|EFP65644.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
5_7_47FAA]
Length = 373
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +++ +LS ++ E E + ++ TGG+
Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ ++++++ L +
Sbjct: 107 PLLRKD--IERLVEKLARL 123
>gi|306821141|ref|ZP_07454757.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550834|gb|EFM38809.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 167
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C CF ++ + G + + + ++Y+ E +I + GG+PL ++ +
Sbjct: 24 SGCTHNCFNCFNKDYQNFEYGNEFTQRQIDEIISYMSED-EIAGLTILGGEPLQQNYDDM 82
Query: 163 QKVLKTLR 170
LK +R
Sbjct: 83 IDFLKQVR 90
>gi|291458400|ref|ZP_06597790.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418933|gb|EFE92652.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 269
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 45/204 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P L L C + CR+C + + + A Y + + +
Sbjct: 41 PGTRFLIFLKGCAMRCRYC---HNPDTWDYHSEDMRSADSLLDQAERYREYWGEDGGITV 97
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-----------RVPIVDP----QRIN 193
+GGDPLI L ++ + + R ++ + P ++
Sbjct: 98 SGGDPLIQIDFVL-QLFEEAKR-------RGINTCLDTSAQPFTRKKPFFGKFTKLMKLT 149
Query: 194 PELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
++ +KE + K ++ N E + L+ G+ + + VL+ G+ D
Sbjct: 150 DTVLLDIKEIDSRKHRWLTGWGN------ENILDCARYLSETGVPVWIRHVLVPGVTDRD 203
Query: 252 EILANL------MRTFVELRIKPY 269
E L +L + ++ I PY
Sbjct: 204 EELRSLKSFIDSLHNVKKVEILPY 227
>gi|290958805|ref|YP_003489987.1| hypothetical protein SCAB_43781 [Streptomyces scabiei 87.22]
gi|260648331|emb|CBG71442.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 293
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 26/192 (13%)
Query: 98 LLKLLHVCPVYCRFCFRR---EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWE--- 146
++ C + C +CF G + E A + + Q
Sbjct: 23 VINPYTGCVLGCAYCFASFAGRQFGRSVKEWGDYLYVKKNAVELARTELAKMPQDKRQGT 82
Query: 147 -VIFTGGDPLILSHK--RL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
++ + DP RL + +L+ L+ + + ++R ++ P+V R + +L+ L
Sbjct: 83 MLLSSVTDPYQGHETQYRLTRGILRELQAVGYPGLVRILTKSPVVT--R-DIDLLTGLPR 139
Query: 203 AGKPVYIAIH---ANHPYEF-SEEAIAAISRLA---NAGIILLS-QSVLLKGINDDPEIL 254
A + + + E + A + LA AGI + LL PE+L
Sbjct: 140 AEVGMTVTTSDDKVSRWLEVRAPLASRRLRTLAELNEAGIPTYAFVGPLLPHFATQPELL 199
Query: 255 ANLMRTFVELRI 266
+L VE +
Sbjct: 200 DDLFGQLVEAGV 211
>gi|269118813|ref|YP_003306990.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
gi|268612691|gb|ACZ07059.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
Length = 430
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 23/146 (15%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
+S K V R R +K+ C +C +C + S+ E+ L I
Sbjct: 126 DQKEYSSQKYAVSRDKARAFVKIQDGCTKFCSYCKI-----PYARGMSRSRQPESVLEEI 180
Query: 139 Q--EKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
+ ++ E++ TG + LS + +L+ + I+ + +R S V
Sbjct: 181 KFLGEAGYKEIVVTGIN---LSEYGSDFGENINFDYILEKILKIEEIDRVRVSS----VY 233
Query: 189 PQRINPELIQCLKEAGKPVYIAIHAN 214
P ++ + I LKE K + +H +
Sbjct: 234 PDTLSEKFISLLKE-NKKLMPHLHVS 258
>gi|170291224|ref|YP_001738040.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175304|gb|ACB08357.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 498
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 15/112 (13%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
++ LL++ C CRFC + ++ + A+ Y E+ G D
Sbjct: 181 NKFLLEISRGCGWGCRFCGMGWHWRPRLDAPMN--EVREAIEY-ASDLGFREIFIIGSDA 237
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAG 204
+ + TL I + P + +++ EL+ ++ G
Sbjct: 238 ASS-----KAIKDTLWEIAE-----IGLKASTPSIRADQVDVELLDLIRSTG 279
>gi|168179004|ref|ZP_02613668.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916]
gi|226950767|ref|YP_002805858.1| radical SAM domain-containing protein [Clostridium botulinum A2
str. Kyoto]
gi|182670221|gb|EDT82197.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916]
gi|226844406|gb|ACO87072.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 715
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151
+ L C + C++C+ V V+S + A+ YI + I VI F G
Sbjct: 22 VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78
Query: 152 GDPLI---LSHKRLQKVL 166
G+PL+ L K + ++
Sbjct: 79 GEPLLEIDLMDKIIDYIM 96
>gi|164688504|ref|ZP_02212532.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
16795]
gi|164602917|gb|EDQ96382.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
16795]
Length = 445
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
RY LK+ C C +C ++ G + + +D A + E+ + E+
Sbjct: 138 RYVSTPSHMAYLKIGEGCDNKCTYCIIPKLRGKYRSRKM--EDIIAEAKKLAER-GVKEL 194
Query: 148 IFTGGD----PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ D L L ++L +L+ L I+ + +R V P+ I EL++ +K+
Sbjct: 195 VVIAQDTTKYGLDLYGEEKLANLLEELAQIEGFKWIR----VMYSYPESITEELVKVIKK 250
Query: 203 A 203
Sbjct: 251 Y 251
>gi|58039893|ref|YP_191857.1| putative oxidoreductase [Gluconobacter oxydans 621H]
gi|58002307|gb|AAW61201.1| Putative oxidoreductase [Gluconobacter oxydans 621H]
Length = 400
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R LL++ C C FC G + T + A A ++ Q E++ TG D
Sbjct: 111 RALLQVQQGCDHRCTFCIIPYGRGDSRSTPV-EDAIARAEALVEAGHQ--EIVLTGVD-- 165
Query: 156 ILSH-----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
I S K L + + LR + V+ LR S P++ + + L E +
Sbjct: 166 IASWQGSGGKGLGALCRELLRRVDGVRRLRLSSIDPVLLDAQTGDADLWWLLENEPRLMP 225
Query: 210 AIHAN 214
+H +
Sbjct: 226 HLHLS 230
>gi|20094976|ref|NP_614823.1| molybdenum cofactor biosynthesis protein [Methanopyrus kandleri
AV19]
gi|24211984|sp|Q8TV60|MOAA_METKA RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|19888230|gb|AAM02753.1| Molybdenum cofactor biosynthesis enzyme [Methanopyrus kandleri
AV19]
Length = 307
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + + C + C +C R E G + LS+ + L E + +V TGG+PL
Sbjct: 12 VRISVTMRCNMACVYCHREGERPGRSE---LSAAEWGRLLRACAE-IGVRKVKITGGEPL 67
Query: 156 ILSHKRLQKVLKTLRYIKHVQILR 179
+ L ++++ + V ++
Sbjct: 68 LRRD--LIEIIENAEGFEEVSLVT 89
>gi|330836973|ref|YP_004411614.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
gi|329748876|gb|AEC02232.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
Length = 453
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R LK+ C C FC R V K L++ + + ++ E+ EV+ TG +
Sbjct: 164 QRAYLKVQDGCDNACAFC--RVHVARGKAVDLNADEVVRRVMHL-ERQGFHEVVLTGVN- 219
Query: 155 LIL---SHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L + + L +++ L +I +R S ++P ++ L+ L + Y
Sbjct: 220 LTMYGYKGEGLGALVEKILEHIGSDMRIRLSS----LEPDHVDGRLLDTLHDPRMQPYFH 275
Query: 211 IHANHPYE 218
I +
Sbjct: 276 IPVQSANQ 283
>gi|300728421|ref|ZP_07061783.1| translation initiation factor IF-1 [Prevotella bryantii B14]
gi|299774340|gb|EFI70970.1| translation initiation factor IF-1 [Prevotella bryantii B14]
Length = 72
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +IV ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|328698428|ref|XP_001952088.2| PREDICTED: molybdenum cofactor biosynthesis protein 1-like isoform
1 [Acyrthosiphon pisum]
Length = 546
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R + + + L C + C +C + S++ +LS+ + ++ ++ + ++ T
Sbjct: 33 RKHNYLRVSLTERCNLRCEYCMPLKGAKLSEQSKLLSNNEIVRLVSLFAKQ-GVDKIRIT 91
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + + +++++LR I+ ++ + + + L+ L+ AG +
Sbjct: 92 GGEPTVKKD--IIQIVESLRDIRKLKTIAMTTNGLT-----LTKHLVD-LQRAGLN-ALN 142
Query: 211 IHANHPYE-----FSEEAIAAISRLANAGIILLSQ---------SVLLKGINDDPEILAN 256
+ + E + + R+ AGI L Q VL++GIN + L +
Sbjct: 143 VSLDTLQENTYGKITRRDGRLLKRVL-AGIDLALQLGFSPVKVNCVLMRGIN--FDELGD 199
Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG-QKIVAS 296
+ + +I Y + + + + +E ++I+ S
Sbjct: 200 FVEMTRDRKIN--YRFIEFMPFSMNDWEEKRMVPYKEAIREIMKS 242
>gi|329957659|ref|ZP_08298134.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
gi|328522536|gb|EGF49645.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
Length = 445
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C YC +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIKFVSRSKR---FM 257
Query: 211 IHANHP-YEFSEEAIAAISR 229
H + P S+E + + R
Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277
>gi|296166708|ref|ZP_06849133.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897973|gb|EFG77554.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 516
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 35/207 (16%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----E 116
P K + P DP+ L + ++ +L + C + C CF
Sbjct: 81 PTKAHVPDAPG-NFDPVPSAYLQGLPQMQTQHTCILLEDIAATCNLRCPTCFADSSPDLR 139
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
V + + + A +E ++ V+ +GG+P + +L ++L L
Sbjct: 140 DVVAVGDVLANVDQRLA-----RENGRLDVVMLSGGEPTLHP--QLPELLAELSSRP--- 189
Query: 177 ILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAI 224
I R + + RI + EL+ L E + + + + H + S
Sbjct: 190 ITRI---LLNTNGVRIAHDDELLDLLTEHRERAEVYLQYDGLSPAAHRHHRGGDLSRVKR 246
Query: 225 AAISRLANAGIILLSQSVLLK--GIND 249
AA+ RL++ + + V+ G+ND
Sbjct: 247 AALRRLSDR--EIFTTLVMTAALGVND 271
>gi|317132121|ref|YP_004091435.1| protein of unknown function DUF512 [Ethanoligenens harbinense
YUAN-3]
gi|315470100|gb|ADU26704.1| protein of unknown function DUF512 [Ethanoligenens harbinense
YUAN-3]
Length = 436
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 36/163 (22%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ L+ C +C FCF ++ + T+ D +A L+++ I T D
Sbjct: 77 ETYLMDKKRRCQNHCVFCFIDQLPKGLRKTLYFKDD-DARLSFLMGN-YITLTNLTEQDV 134
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + + + + H+ P + ++ G +
Sbjct: 135 ----DRIIDMHISPI-------NVSVHTTNPAL-----------RVRMMGN--------S 164
Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
H E A+ RLA AG L Q VL G+ND E+ +L
Sbjct: 165 HAGE----ALVHFYRLAEAGTKLNCQLVLCPGLNDGAELARSL 203
>gi|160934421|ref|ZP_02081808.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
gi|156867094|gb|EDO60466.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
Length = 329
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 23/161 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154
CP C FC ++ + G + E A ++ K + E+ F GG
Sbjct: 2 AFFIPHAGCPHQCSFCDQKSITGESRRVEPGEVAAVLEDARQALRGKQKASEIAFFGGSF 61
Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
+ + +LK V+ +R +R P I+P +++ LK+ G K +
Sbjct: 62 TAVPPAYQESLLKAAY--PFVKRGDFSGIRISTR-----PDAIDPPVLERLKQYGVKSIE 114
Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILLSQS 241
+ N +++ + A + G L Q
Sbjct: 115 LGAQSMDDRVLVLNQRGHTAQDVVNASRMIREYGFSLGLQM 155
>gi|126731382|ref|ZP_01747189.1| radical SAM domain protein [Sagittula stellata E-37]
gi|126708293|gb|EBA07352.1| radical SAM domain protein [Sagittula stellata E-37]
Length = 329
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 14/155 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
P + +C + C C+ + +++ + E+ L ++++ + E+ FTGG
Sbjct: 46 PQTLWFNTGTLCNITCANCYIESSPENDSLVYITTAEVESYLDQLEDRDWGVREIGFTGG 105
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ++ + + L V IL R P++ P + L + E G + + I
Sbjct: 106 EPF-MNPEMIAMTRAALERGYEVLILTNAMR-PMMRP-HVQRGLRELQAEHGDRLNLRIS 162
Query: 213 ANH--PYEFSEE--------AIAAISRLANAGIIL 237
+H + E I + L + GI +
Sbjct: 163 LDHYSASQHDAERGAGSFAKTIEGMRWLRDEGIRM 197
>gi|325846594|ref|ZP_08169509.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325481352|gb|EGC84393.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 474
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113
Q + ++ +L + ED + + S K + + Y +RI+L + C C +C
Sbjct: 48 QGLSHRDAFVLLSCQEED-LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ LS + + +Q+ + TG DP+ + + + +KT+ IK
Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166
Query: 174 H 174
H
Sbjct: 167 H 167
>gi|322382952|ref|ZP_08056784.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321153072|gb|EFX45530.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 510
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 25/186 (13%)
Query: 58 RQFIPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FR 114
RQF+ ++ L P + D I + + + H + L + CP C +C F
Sbjct: 138 RQFL-KEHYLVTRPKADLLMD-IAERQLKVIPDLFHLDHEVSLYIGIPFCPTKCAYCTFP 195
Query: 115 REMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKT 168
+ G+V + ++ +++ I + + GG P L + + + +T
Sbjct: 196 AYDIQGNNGSVHAFLEGLHEEIRLTGEWLKRHGMGITTIYWGGGTPTSLEAEDMDALFRT 255
Query: 169 ----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
L + V+ L V P I P+ ++ +K + I P F++
Sbjct: 256 MQKHLPQMDKVRELT----VEAGRPDTITPDKLEVMKRWDVDRISIN-----PQSFTQLT 306
Query: 224 IAAISR 229
+ I R
Sbjct: 307 LDTIGR 312
>gi|312898407|ref|ZP_07757797.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
gi|310620326|gb|EFQ03896.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
Length = 217
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C + C +C ++ + + + Y + + ++ TGG+PL+
Sbjct: 21 ALFIRFQGCNLSCTYCDTAW--ANEADCPYEEESPQEIVDY-ACREGVTDITLTGGEPLL 77
Query: 157 LSHKRLQKVLKTLRYIK-HVQI 177
+ + +++ L HV+I
Sbjct: 78 --QEGIDELIDLLSKHGFHVEI 97
>gi|289523143|ref|ZP_06439997.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503686|gb|EFD24850.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 329
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 42/181 (23%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L C + C FC + LS D L+ +++ + + V FT +PLI
Sbjct: 73 VLSLGSVGCNMRCPFCQNWHISTWSPQIKLSRIDPLELLSLVKKYN-VTAVAFTYNEPLI 131
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----QRINPELIQC------------ 199
L+ + L ++V+++ + + P RI+ +
Sbjct: 132 SYEYLLEAI--PLLKKENVKVVLVTNGLINTLPLKEIAHRIDAANVDLKTFNEETYKKLG 189
Query: 200 --LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
LK K + I N E + L+ GINDD L
Sbjct: 190 GDLKTVLKTLQILKSFNVHIEITHL--------------------LVTGINDDLGEFEAL 229
Query: 258 M 258
Sbjct: 230 C 230
>gi|257064347|ref|YP_003144019.1| iron-only hydrogenase maturation protein HydE [Slackia
heliotrinireducens DSM 20476]
gi|256792000|gb|ACV22670.1| iron-only hydrogenase maturation protein HydE [Slackia
heliotrinireducens DSM 20476]
Length = 351
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R L+++ + C C +C R S L+ A E V+ G DP
Sbjct: 56 TRGLIEVSNFCKNDCLYCGIRRSNRSCHRYRLAVDQILACADVGYEVGFRTFVLQGGEDP 115
Query: 155 LILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ +R+ ++ L+ +H L R P E Q L+EAG Y+
Sbjct: 116 WF-TDERVCDCVRRLKQ-RHPDCAVTLSLGERSP---------ESYQALREAGADRYLLR 164
Query: 212 HAN---------HPYEFSEEAIAAI-SRLANAGIILLS 239
H HP + S +A A L AG +
Sbjct: 165 HETATPGHYARLHPADMSWDARMACLYSLREAGFTVGC 202
>gi|225848259|ref|YP_002728422.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643519|gb|ACN98569.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 321
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C M +L ++ + + + + +V TGG+PL+
Sbjct: 8 ISVTDKCNLKCFYCRPDNMEFIPHDEILRYEEIAKLVKAMTKY-GLKKVRITGGEPLV-- 64
Query: 159 HKRLQKVLKTLRYIKHVQIL 178
+++ ++ L+ I ++ +
Sbjct: 65 RPQIENLVSLLKSIPQIEDI 84
>gi|196234696|ref|ZP_03133509.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
Ellin428]
gi|196221244|gb|EDY15801.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
Ellin428]
Length = 337
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 31/169 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
+ + C C +C +E+ G + + A LA I + ++ TGG+P
Sbjct: 18 ISVTDRCNFRCTYCMPKEVFGHGYDFLPKEEVLTFEEIARLARIFVELGAEKLRLTGGEP 77
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRVP--------IVDPQRIN---PELIQCL 200
L + L +++ L I+ V L SR+ QR+ L
Sbjct: 78 -TLR-RELHRLVSELAAIRGVHDLTLTTNGSRLVEEARNLRNAGL-QRLTVSVDALDDVT 134
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIN 248
A V +H + I AG + V+ +G+N
Sbjct: 135 FRAMNDVSFPVH---------RVLRGIEAAREAGFAPIKINMVVKRGVN 174
>gi|187939873|gb|ACD39011.1| helicase-related protein [Pseudomonas aeruginosa]
Length = 1126
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
S +I R+ AG +Q+VL +G ND L+ L + L I
Sbjct: 540 SAALAESIERMRAAGFSYRNQAVLCRG-ND---KLSELGQELERLGI 582
>gi|218782637|ref|YP_002433955.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218764021|gb|ACL06487.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 353
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ CP C FC +R + G+ + + + E L++ ++ + F GG+ L
Sbjct: 12 IFLPHAGCPHQCVFCNQRAITGAARPFSAEDARAEVERYLSFPRKSKGPTIISFYGGNFL 71
Query: 156 ILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
+S KR++ +L + V +RF +R P ++P + L+ K V + +
Sbjct: 72 GISRKRIRDLLDLASQYVNQGRVDGIRFSTR-----PDTVSPLSLSLLEGYPVKTVELGV 126
Query: 212 HANHPYEFSEEAIAAISRLANAGIILL 238
EE + A R G +L
Sbjct: 127 -----QSMDEEVLEASRR----GHTVL 144
>gi|124486075|ref|YP_001030691.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
gi|124363616|gb|ABN07424.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
Length = 319
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 31/169 (18%)
Query: 99 LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C R + ++ ++ + E + + TGG+
Sbjct: 24 IAVTSACDLRCIYCHREGEGDNGCTRDDHASQMTKEEISELIGVFAE-LGVKTIKLTGGE 82
Query: 154 PLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
PL+ +L +R I H++ + + +L + LK+AG + +
Sbjct: 83 PLLRPD-----LLDIIRSIPPHIE------SSLTTNGTHL-AKLAKELKDAGLS-RVNVS 129
Query: 213 ANHPYE-----FSE-----EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ + + + I AG+ + V+LKG+ND+
Sbjct: 130 LDTMNRDTYIKITGKDRLKDVLDGIDAALAAGLTPVKLNMVVLKGMNDN 178
>gi|26988695|ref|NP_744120.1| molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
gi|24983483|gb|AAN67584.1|AE016388_4 molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
putida KT2440]
Length = 337
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+
Sbjct: 30 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 87
Query: 157 LSHKRLQKVLKTLRYIK 173
RL + + +
Sbjct: 88 SP--RLDAFMAAVAKLD 102
>gi|189500687|ref|YP_001960157.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
phaeobacteroides BS1]
gi|189496128|gb|ACE04676.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
phaeobacteroides BS1]
Length = 424
Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 46/190 (24%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
RI L + C + C +C R+ ++ ++S+ AL Y+ + I V
Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSRVLSPHQALHYLDQALELSPNIAVVG 79
Query: 149 FTG-GDPL-----ILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
G GDP ++ RL +K + L + S V P E + L
Sbjct: 80 IAGPGDPFANPEETMTTLRLVREKYPEMLLCV--------ASNGLNVLPY---IEELAEL 128
Query: 201 KEAGKPVYIAI-----------HANHPYEFSEEAI----------AAISRLANAGIILLS 239
K + + I H + + A+ +L G+
Sbjct: 129 KVSHVTLTINAIDPEIGAEIYAWVRHGKKVFRDVAGAELLLKNQLEALKKLKELGVTAKV 188
Query: 240 QSVLLKGIND 249
S+++ GIND
Sbjct: 189 NSIIIPGIND 198
>gi|187734933|ref|YP_001877045.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC
BAA-835]
gi|205829710|sp|B2UNF2|RLMN_AKKM8 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|187424985|gb|ACD04264.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC
BAA-835]
Length = 359
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 53/211 (25%)
Query: 93 YPDRILLKLLHV--CPVYCRFC------FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQ 143
+R+ L + C C+FC +R + + G +LS++ +
Sbjct: 107 KSERVTLCVSSQVGCAFGCKFCASGLLGLKRHLTTGEIIGQILSAEAI--------AGKR 158
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ ++F G G+PL + L I + L +R + P L + L
Sbjct: 159 VNNIVFMGMGEPL----SNFDNLADALEIITSHRGLEIGARHITISTSGFVPGL-KKLAA 213
Query: 203 AGKPV--YIAIHANHPYEFSEEAIAAISRLANAGIIL-------------LSQSV----- 242
+ + +++H ++E I N L +Q
Sbjct: 214 YPRQIRLAVSLHG-----ATDEVRDQIMP-VNKKWPLSQLIPALEEWNRGRNQMPTLEYI 267
Query: 243 LLKGINDDPEILANLMR---TFV-ELRIKPY 269
L++ IND P+ ++L+R ++ + PY
Sbjct: 268 LIRDINDSPKDASHLVRIAKRLHAKVNLIPY 298
>gi|329907318|ref|ZP_08274630.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
bacterium IMCC9480]
gi|327547006|gb|EGF31898.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
bacterium IMCC9480]
Length = 371
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ + +LS ++ + I ++ TGG+
Sbjct: 44 ISVTDRCNFRCVYCMPKELFDKDYQFLPQTALLSFEEITRMARIFIDH-GIEKIRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIK 173
PL+ K L+K+++ L +K
Sbjct: 103 PLL--RKHLEKLIEMLSRLK 120
>gi|312128061|ref|YP_003992935.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor
hydrothermalis 108]
gi|311778080|gb|ADQ07566.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor
hydrothermalis 108]
Length = 308
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + L + C +C +C +++ + LS ++ ++ ++ I ++ T
Sbjct: 6 SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 63
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + + ++++ I ++ + + ++ + +K K V I+
Sbjct: 64 GGEPFLRDD--IFEIIEFAHSIG-IENINITT---NGW--LDTEKIKKVIKSPLKSVNIS 115
Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248
+ + + + AI L + ++ +VL++ +N
Sbjct: 116 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 160
>gi|312885416|ref|ZP_07745057.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
gi|311302114|gb|EFQ79142.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
Length = 317
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 99 LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ LL C + C +C E+ + +++ E +A + + + + TGG+PL
Sbjct: 17 VSLLSTCNLGCIYCTMGSEDEIAYDHRPQTPAARFIE-LIAAVHAHTGLKTIRLTGGEPL 75
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
+ + L+ V+ ++ + + +R S + + L++AG V +++ A
Sbjct: 76 LY--RELEAVISGIKALG-ITDIRMTSNAF------LLERSAEKLQQAGLRSVNVSLDAM 126
Query: 215 HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250
F I +AG+ + SV+++G N D
Sbjct: 127 DANTFFAMTRRKQLPRTLQGIEAAIDAGLEVKINSVIMRGKNHD 170
>gi|119356660|ref|YP_911304.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354009|gb|ABL64880.1| Radical SAM domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 351
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 88 GIVHRYPD-RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
G+ H D +L++ + C + CR C G + ++S + + L ++ S I
Sbjct: 42 GVAHLNRDATAILQVNTGYRCNLLCRHCHVDA--GPDRTEMMSRQTMQDCLNALK-NSSI 98
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ TGG P + + L ++ R I
Sbjct: 99 RTLDITGGAPEM--NPELPWFIREARKI 124
>gi|330466391|ref|YP_004404134.1| MiaB-like tRNA modifying protein ylig [Verrucosispora maris
AB-18-032]
gi|328809362|gb|AEB43534.1| miab-like tRNA modifying enzyme ylig [Verrucosispora maris
AB-18-032]
Length = 492
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 43/158 (27%)
Query: 99 LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
LKL C C FC FR V +L+ + A KS + E++
Sbjct: 184 LKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLA-------KSGVRELVLVSENS 236
Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILR----------------FHSRVPIVDP-- 189
G D + + L+K+L L I + +R + P V P
Sbjct: 237 TSYGKD--LGDPRALEKLLPQLAAIDGIVRVRASYLQPAETRPGLIEAIAT-TPGVAPYF 293
Query: 190 ----QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
Q + +++ ++ G E +A
Sbjct: 294 DLSFQHSSEPVLRRMRRFGSTDRFLELLASARELDPQA 331
>gi|304406644|ref|ZP_07388299.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344177|gb|EFM10016.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
Length = 378
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGG---D-PL 155
+VC VYCRFC GS++G VL + E + IQE + E++ GG D P
Sbjct: 62 TNVCDVYCRFCAFYRAPGSKEGYVLPN---ETIMQKIQETVDVGGTEILMQGGTNPDLPF 118
Query: 156 ILSHKRLQKVLKTLRYI 172
L+++ + I
Sbjct: 119 SYYTDVLREIKQRFPQI 135
>gi|289524370|ref|ZP_06441224.1| molybdopterin-based tungsten cofactor biosynthesis protein
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289502389|gb|EFD23553.1| molybdopterin-based tungsten cofactor biosynthesis protein
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 439
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+++++ C + C CF G + D L ++ K+ + F+GG+P
Sbjct: 89 TVVVEVTEKCQLKCPVCFASAGEGFEPDFH----DLAKLLHDVRHKASNAILQFSGGEP- 143
Query: 156 ILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ + L +Q+ R +P Q LK++G ++ +
Sbjct: 144 TIRDDLFDLI--RLASNLKFPGIQLNTNGLR-LAQEP-----GYAQKLKKSGLN-WVFLQ 194
Query: 213 ANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ E + E + AI+ AG+ ++ L KGIND+
Sbjct: 195 FDGLRETTYRALRGRPLLSEKVRAINACQEAGLGVVLVPTLTKGINDN 242
>gi|154498439|ref|ZP_02036817.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
29799]
gi|150272507|gb|EDM99692.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
29799]
Length = 449
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 72/262 (27%)
Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+P E +++ ++ GD +H+ G +V LK+ C C +C +
Sbjct: 117 IVPAVE--SVMEGDQPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYL 174
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
G + + + A + + E+I D I
Sbjct: 175 RGRYRSRTM--ESLLAEAKEL-ADRGVKEIIVIAQD-----------------------I 208
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR----LANA 233
R+ + + +R+ EL++ L + ++ +H +P E ++ I I+ L
Sbjct: 209 TRYGTDL---YKKRMLGELLKELCKLPFH-WVRLHYLYPDELDDDLIDVIASEPKILKYI 264
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
I L+ IND ++L ++ R GT E +
Sbjct: 265 DIP-------LQHIND--KLLRSMNRR------------------GTK------AEILAL 291
Query: 294 VASLKEKISGL-CQPFYILDLP 314
+ L+ +I GL + I LP
Sbjct: 292 LDKLRARIPGLVLRTSLIAGLP 313
>gi|121078489|gb|ABM47405.1| Fe-Mo cofactor biosynthesis protein [Rhizobium leguminosarum bv.
trifolii]
Length = 495
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 42/193 (21%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ L + C + C +C R+ G + + A+A E Q
Sbjct: 59 AHLYFARMHLAVAPACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAMAVANEVPQ 118
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ V G GD ++ + L + R I V++ + P+ + EL+
Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DELVDMNV 174
Query: 202 EAGKPVYIAI-----------------HAN--------HPYEFSEEAIAAISRLANAGII 236
+ N H + + LA GI+
Sbjct: 175 GHVTITINMVDPKIGTKIYPWIFYDGRRYNGIDASRILHERQMLG-----LEMLAERGIL 229
Query: 237 LLSQSVLLKGIND 249
+ SV++ G+ND
Sbjct: 230 IKVNSVMIPGVND 242
>gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 500
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155
L+ + + C + C CF V S+K S ++ L ++ + + + GG+P
Sbjct: 97 LIDVTNRCNLKCPVCFANAAV-SKKLYEPSYEEIRTMLRNLRNNRPVPTPAIQYAGGEPT 155
Query: 156 ILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ L ++K H QI R+ R+ P L Q LK+AG + +
Sbjct: 156 VRKD--LVDLIKLAKEEGFSHTQIATNGVRL-----ARL-PSLAQELKDAGLNT-VYLQF 206
Query: 214 NHPYE----------FSEEAIAAISRLANA--GIILLSQSVLLKGINDD 250
+ E I AI A GI+L+ LLKGINDD
Sbjct: 207 DGVTEEPYLEIRQKDLLATKIKAIENCRKANLGIVLV--PTLLKGINDD 253
>gi|310779821|ref|YP_003968153.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
gi|309749144|gb|ADO83805.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
Length = 306
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
L L C C +C++ G++K + + + I+ + + + GG+P
Sbjct: 10 LILTMECNANCDYCYQN---GAEKVPDMDEEFIDKLYEKIKSEEYYNKFVIALFGGEP-T 65
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEA 203
L+ ++ +L+ L +K ++ RF P I+ + + +K+A
Sbjct: 66 LAEDKILYLLEKLENLKDSKVFRF------TMPTNAIDTDAVLRIKKA 107
>gi|307594418|ref|YP_003900735.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549619|gb|ADN49684.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
Length = 366
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 69/250 (27%)
Query: 84 SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
S + + +Y + +L +VC + CRFC + G + LS ++ +A
Sbjct: 40 SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSVEEAVRRVA 99
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
I + I +V+ GG + I+ L
Sbjct: 100 AIDREFGIRQVLVQGG-------------INPELDIE------------------YYEGL 128
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQS---VLLKG 246
+ LK V I H P E A + RL AG+ L+ +L+
Sbjct: 129 FKALKAKLPHVAI--HGLSPIEVDYLARKHRMSYAEVLDRLRGAGMDTLAGGGGEILVDR 186
Query: 247 IND-------DPEILANLMRTFVELRIK----PYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
+ D + N+M T + I Y H ++ H +I+
Sbjct: 187 VRRAIAPHKIDADTWLNIMETAHRMGIMSNATMMYGHVETMSDWAEHL-------YRIIE 239
Query: 296 SLKEKISGLC 305
L+ + G
Sbjct: 240 -LQRRTHGFL 248
>gi|317056337|ref|YP_004104804.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
gi|315448606|gb|ADU22170.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
Length = 489
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 26/146 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWE--------V 147
L + CP C +C + G L + + I+ + I + V
Sbjct: 168 LYVSIPFCPTRCSYCS---FISQTLDSGRKLIPEYIDKMCREIRHTALITKRLGLKLDTV 224
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG P + +L ++K I+H + +R ++ V P I E ++ +K G
Sbjct: 225 YFGGGTPTSIEASQLAALMK---CIEHSFDMSSVREYT-VEAGRPDTITEEKLRTIKANG 280
Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
+ I P + + + AI R
Sbjct: 281 CTRISIN-----PQSLNPDVLEAIGR 301
>gi|210630236|ref|ZP_03296326.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279]
gi|210160562|gb|EEA91533.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279]
Length = 272
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 47/206 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148
P + CP+ C +C VGS GT ++ E + + + +
Sbjct: 33 PGVRFVVFTQGCPMRCAYCHNPDTWAVGSGAGTSVT---VERIIDEFESNRPFYRTGGIT 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-------DPQRINPELIQCLK 201
TGG+PL L + + + + + R H+ + P R + + L
Sbjct: 90 VTGGEPL-LQPEFVGDLFAAMHANPNG---RVHTCLDSCGYAYNPKKPARFD----KVLA 141
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISR------------LANAGIILLSQSVLLKGIND 249
+ + H+ E A++R LA G+ ++ + V++ GI D
Sbjct: 142 QTDLVLLDIKHS------DPEGHKALTRCAPDNILAFGDELARRGVKVVIRHVIVPGITD 195
Query: 250 DPEILANL------MRTFVELRIKPY 269
E L V L + PY
Sbjct: 196 TEEECEALGRLIAPWHNVVGLEMLPY 221
>gi|196230119|ref|ZP_03128982.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus
Ellin428]
gi|196225716|gb|EDY20223.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus
Ellin428]
Length = 334
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +L ++ + CP++C +C M G L++ + + + + + F+GG+
Sbjct: 5 PYALLAEVTYRCPLHCPYCSNPAMYPG--GNELTTSEWQRVIDE-AAALGVLQAGFSGGE 61
Query: 154 PLILSHKRLQKVLKTLRY 171
PL+ L +++ R
Sbjct: 62 PLLRPD--LAQLIAHARQ 77
>gi|126459299|ref|YP_001055577.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126249020|gb|ABO08111.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 294
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 30/177 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
L C C +C+ + + + E +++ + V + DP
Sbjct: 25 LNPYTGCGHGCLYCYITSYIPNAFNPRPKERLMELVRRDLEKIPRGAVVALSNSSDPYTP 84
Query: 158 SHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+L +KVL+ L ++ + ++ P+V + L + + V + I
Sbjct: 85 PEAQLGLTRKVLEAL--LERGYRVLITTKSPLVL------RDLDILAKHRERVAVQITIT 136
Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILAN 256
E A + A+ +LA AGI + +V L+ +NDD E +
Sbjct: 137 TLREELAERLEPRAPRPRGRLDAVKKLAEAGIKV---TVRLDPLIPYLNDDEENIEE 190
>gi|91785150|ref|YP_560356.1| tRNA-i(6)A37modification enzyme MiaB [Burkholderia xenovorans
LB400]
gi|123168088|sp|Q13UD5|MIAB_BURXL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|91689104|gb|ABE32304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia xenovorans
LB400]
Length = 457
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
+ EV G + L L + ++++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248
Query: 195 ELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265
>gi|86748084|ref|YP_484580.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris HaA2]
gi|86571112|gb|ABD05669.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
palustris HaA2]
Length = 518
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 60/203 (29%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H + R+ + + C + C +C R+ G + + +A Q
Sbjct: 68 AHHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAARKVIAVASTIPQ 127
Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRYI--KHVQ 176
+ + G GD L K L ++ + + HV
Sbjct: 128 MTVLGIAGPGDALANPAKTFKTFELVTATAPDIKLCLSTNGLMLPDYVEQIAAMNVDHV- 186
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI--------- 227
+ I+PE+ G +Y I NH F+ + I
Sbjct: 187 TITI---------NMIDPEI-------GAQIYPWIFYNH-RRFTGVEASKILSERQLLGL 229
Query: 228 SRLANAGIILLSQSVLLKGINDD 250
L GI++ SV++ GIND
Sbjct: 230 EMLTARGILVKVNSVMIPGINDR 252
>gi|330990520|ref|ZP_08314478.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
gi|329762423|gb|EGG78909.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
SXCC-1]
Length = 358
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 26/189 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
+ ++ C C +C + + + + +A + + + ++ TGG+P
Sbjct: 28 ISVMDRCNFRCPYCMPKATYHEGFRFLGPKERLDFDEIERVARMAAELGVTKIRLTGGEP 87
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDP-------QRINPELIQCLKEAG 204
L+ L +++ L + ++ + + +P P QR+ L
Sbjct: 88 LL--RPGLPDLVRRLGALPGIEDVALTTNGVLLPRFAPALRQAGLQRVTVSLD------S 139
Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD--PEILANLMRT 260
+ H + + I G + +V+ +G+ND P+ILA T
Sbjct: 140 LDPAVFAHMSGGRGDLPAVLKGIDAACATGFEGGVKINTVVQRGVNDADVPDILARFRNT 199
Query: 261 FVELRIKPY 269
V +R+ Y
Sbjct: 200 GVTVRLIEY 208
>gi|304440215|ref|ZP_07400105.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371264|gb|EFM24880.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 340
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 28/178 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLI 156
+ CP C FC + ++ + T + K+ + L Y ++ I EV F GG
Sbjct: 8 IFIPHLGCPHDCVFCNQNKIASTSIATKKTVKNTIDEYLDYFRKD-SIVEVAFYGG---S 63
Query: 157 LSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208
+ ++ + + + V +R +R P I+ +++ LK G V
Sbjct: 64 FTAIPIEDQIN-FLSVANEYKKKNLVSFIRLSTR-----PDYIDENILEILKSNGVDTVE 117
Query: 209 IAIHANHPYEFSEE--------AIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257
+ + +++ ++ ++ L G + L Q V L ND+ E+ +
Sbjct: 118 LGVQSSNQNVLNKSGRGHDFDCVKKSVKMLKKYGFNVGLQQMVGLPYSNDELEMQTAM 175
>gi|296158258|ref|ZP_06841090.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
gi|295891594|gb|EFG71380.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
Length = 369
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ E + ++ TGG+
Sbjct: 41 ISVTDRCNFRCVYCMPRSVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L+ ++ L ++
Sbjct: 100 PLL--RKNLEFLIDRLAHL 116
>gi|294338253|emb|CBJ94291.1| hypothetical phage protein (Radical SAM family) [Campylobacter
phage CPt10]
Length = 266
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I+L L+ C C +C V L+ + + I++ + + TGG+P
Sbjct: 5 IVLNLIDYCGFNCEYCSSS-QVKKVNSNPLTKLNFLMLIKQIEKSLSRFIIKVTGGEP-T 62
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-H 215
L L+ ++ L +K++Q RV I L++ + + H
Sbjct: 63 LHPNFLE-FIEKLNNVKNIQ------RVIIT-----TNGSCNNLEKLNNYKKVHTIISYH 110
Query: 216 PYEFSEEA 223
P + E++
Sbjct: 111 PNQIDEDS 118
>gi|170291214|ref|YP_001738030.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175294|gb|ACB08347.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 334
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
S G++ R + I ++ CP+ C FC S+ D +++ + +
Sbjct: 16 SVAFGLIDRGTNLIQVRPSSSCPLSCIFCSTDAGPKSRTRRTEFLVDLNYIISWFERLVE 75
Query: 144 ------IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
I I T GDP + ++ ++K LR I V+++ + P+
Sbjct: 76 SKGISDIEAHIDTVGDPFLYP--KIVDLVKRLRDIPEVKVISAQTHGPL 122
>gi|91794426|ref|YP_564077.1| radical SAM family protein [Shewanella denitrificans OS217]
gi|91716428|gb|ABE56354.1| Radical SAM [Shewanella denitrificans OS217]
Length = 292
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC Q K + L I V GD +
Sbjct: 18 LILQVTNGCSWNNCSFCDMYTQPQKQFRAQKLDKIEQDILNAAASGYPISRVFLADGDAM 77
Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIV-DPQRINPELIQCLKEAG 204
L KRL+++ + + ++ V +R+ P+ + + ++ LKE
Sbjct: 78 SLPFKRLKEICELINTHLPSV------TRISSYCLPRNLTNKTVEQLKELR 122
>gi|77919684|ref|YP_357499.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77545767|gb|ABA89329.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 1014
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%)
Query: 78 IGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
+ + + G H L + + C + CR C +
Sbjct: 60 LPQGDAAVYPGRSHFLKTESLRELWFHITNRCNMNCRHCM---FGSGPGDAAELDAERIV 116
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LA TGG+PL+ +R + + L + +++
Sbjct: 117 TLARQASNLGCRVFALTGGEPLVH--RRFDYIARELLALPDSRLV 159
>gi|21242671|ref|NP_642253.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
gi|21108142|gb|AAM36789.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
Length = 392
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQIWEVIF 149
P +LLKL C + C +C ++ + LA + E+ + + F
Sbjct: 20 PTAVLLKLTGTCNIDCDYC------YDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAF 73
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG+PL L +++V++ L H R + R PE++ L++ V +
Sbjct: 74 HGGEPL-LRFGLIRQVVQWLE--PH--RARVGF-SLQTNGTRFTPEILDFLEQHDFSVGL 127
Query: 210 AI 211
++
Sbjct: 128 SL 129
>gi|291087012|ref|ZP_06345142.2| radical SAM domain protein [Clostridium sp. M62/1]
gi|291076635|gb|EFE13999.1| radical SAM domain protein [Clostridium sp. M62/1]
Length = 462
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E + +++ + + AL ++ S EV F GG+PL
Sbjct: 97 LHIAHDCNLACRYCFAEEGEYHGRRALMTYEVGKKALDFLVANSGNRINLEVDFFGGEPL 156
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
+ K+L ++L H + RF
Sbjct: 157 MNWDVVKQLVAYGRSLEK-PHNKKFRF 182
>gi|222445142|ref|ZP_03607657.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii
DSM 2375]
gi|222434707|gb|EEE41872.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii
DSM 2375]
Length = 498
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154
L+ + + C + C CF V + + + L ++ + + GG+P
Sbjct: 89 LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146
Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207
+ L +++ HVQI R+ R + LK+AG
Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198
Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
YI N + I AI AG+ ++ L+KG+ND
Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244
>gi|153868712|ref|ZP_01998465.1| radical SAM family protein [Beggiatoa sp. PS]
gi|152074705|gb|EDN71535.1| radical SAM family protein [Beggiatoa sp. PS]
Length = 321
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D + + L ++C C C G + +++ + L Y++ I + FTGG P
Sbjct: 22 DTLQVNLGYLCNQQCLHCHVNA--GPNRIEIMTRETCNQILDYLRATPSIQTLDFTGGAP 79
Query: 155 LILSHKRLQKVLKTLRYIK-HV 175
+ + + ++T R + HV
Sbjct: 80 EL--NPHFRYFVETARQLDVHV 99
>gi|148642909|ref|YP_001273422.1| molybdenum cofactor biosynthesis-related protein, MoaA
[Methanobrevibacter smithii ATCC 35061]
gi|148551926|gb|ABQ87054.1| molybdenum cofactor biosynthesis-related protein, MoaA
[Methanobrevibacter smithii ATCC 35061]
Length = 498
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154
L+ + + C + C CF V + + + L ++ + + GG+P
Sbjct: 89 LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146
Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207
+ L +++ HVQI R+ R + LK+AG
Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198
Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
YI N + I AI AG+ ++ L+KG+ND
Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244
>gi|18312034|ref|NP_558701.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
gi|18159459|gb|AAL62883.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
Length = 372
Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 59/317 (18%), Positives = 104/317 (32%), Gaps = 84/317 (26%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
H P + + CP+ C+ C R + + L++++ + + + E ++
Sbjct: 12 HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELTTQEGKRLIEQVAEFGDPKPLLII 70
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
TGGDPL+ S L +++ + V + S P V P +N E ++ +KE+G K +
Sbjct: 71 TGGDPLMRSD--LFELIDYANSL-SVPV----SLAPAVSPN-LNTETLKLIKESGVKSIS 122
Query: 209 IA-------IHANHPYEFSE------EAIAAISRLANAGIILLSQSV------------- 242
I+ H E E + AI G+ + +V
Sbjct: 123 ISLDGARPETH----DEIRGVPGSYKETVNAIKTAVELGVSVQVNTVVWRKSLAELPEVA 178
Query: 243 -LLKGINDDPEILANLM-----RTFVELRIKP--Y------------YLHHPDLAAGTSH 282
LLK N ++ R EL I P Y Y +
Sbjct: 179 YLLK--NLGVKVWEVFFLIVTGRAKEELDITPEEYEAAVQFLVDVSTYGFQVRTVEAPFY 236
Query: 283 FRLTIE--EGQK----IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
R +E +G++ + L E++ L G +D +
Sbjct: 237 RRAKLERLKGREFGHPLYNQLVERLRNLM----------GPPVRAVDPTIVPTRDGFGII 286
Query: 337 ITDHHNIVH-----DYP 348
+ VH YP
Sbjct: 287 FIAYDGTVHPSGFLPYP 303
>gi|306819868|ref|ZP_07453522.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552115|gb|EFM40052.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 441
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 36/156 (23%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C FCF ++ + T+ D ++ L+++Q + T + +
Sbjct: 92 QTCRNKCIFCFIDQLPKGMRKTLYIKDD-DSRLSFLQGN----FITMT-----NMGDAEI 141
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
K++K +I V + H+ P + ++ LK + +
Sbjct: 142 DKMIK--YHISPVN-ISVHTTNPTL--------RVKMLKNKN---------------AGD 175
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ + RL+NA I + +Q VL+ +ND E+ L
Sbjct: 176 ILDKMKRLSNANINMNAQIVLIPNVNDKEELENTLS 211
>gi|303235727|ref|ZP_07322334.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
disiens FB035-09AN]
gi|302484174|gb|EFL47162.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
disiens FB035-09AN]
Length = 433
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 17/118 (14%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW--- 145
H Y +K+ C +C +C + G K +D +A + +
Sbjct: 135 HHY---AYIKIAEGCDRHCAYCAIPLITG--KHRSRKMEDILKEVAELAAAGTKEFQVIE 189
Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
E+ + G D + + +++ + I V+ +R H P P +L+ ++E
Sbjct: 190 QELTYYGVD--LDGKHHITELISRMADIPGVEWIRLHYAYPNQFPM----DLLDVMRE 241
>gi|261879550|ref|ZP_06005977.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM
17361]
gi|270333776|gb|EFA44562.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM
17361]
Length = 443
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 67/225 (29%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT--GG 152
+K+ C +C +C M G + ++ + +A ++ QI E T G
Sbjct: 150 AYIKIAEGCDRHCAYCAIPLMTGRHTSRSMEDILEEVKQLVAEGVKEFQIIEQELTYYGV 209
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
D I R+ +++ + I V+ +R H P + EL+ ++E
Sbjct: 210 D--IDGKPRIAELISRMADIPGVKWIRLH----YAYPNQFPLELLDVMREK--------- 254
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
+ L+ I+D L R
Sbjct: 255 --------PNVCKYLDIA-------------LQHISDHV-----LSRMLRH--------- 279
Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E +++ +++++ G+ + ++ PG
Sbjct: 280 ------------VSKAETLELIRKIRQEVPGITLRTTLMVGFPGE 312
>gi|205374147|ref|ZP_03226947.1| RNA modification protein [Bacillus coahuilensis m4-4]
Length = 430
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + + + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GG + L +L+ L +K ++ +R S ++ ++ E+++ + ++ V
Sbjct: 200 GGYGEDMKDYNLALLLRDLETQVKGLKRIRISS----IEASQLTDEVMEVIDQS-NMVVR 254
Query: 210 AIHA 213
+H
Sbjct: 255 HLHI 258
>gi|149184079|ref|ZP_01862427.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
gi|148848213|gb|EDL62515.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
Length = 445
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + A + E++ T
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMRSREP-EEVIRQAQQLVDA--GYKEIVLTGIH 201
Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L +L+ L + ++ +R S ++ ++ E+I+ + +
Sbjct: 202 TGGYGED---MKDYNLAMLLRDLEEKVDGLKRIRISS----IEASQLTDEVIEVIDNSKL 254
Query: 206 PVYIAIHA 213
V +H
Sbjct: 255 -VVRHLHI 261
>gi|94266923|ref|ZP_01290577.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93452399|gb|EAT03016.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 351
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + ++ C + C C + ++ + + L I +Q V+ +GG+
Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
PL L + + LR + + E+ + LKE G +
Sbjct: 64 PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114
Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
+H N P F I A I L S K D + L +
Sbjct: 115 GADAKVHDNFRSQPGAFDG-TINATRLFREHEIPFLFNSSFTKRNQADIPRVYRLAKEL- 172
Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + G+ I++ L
Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196
>gi|332300096|ref|YP_004442017.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
20707]
gi|332177159|gb|AEE12849.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
20707]
Length = 454
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
R LK+ C YC +C G S+ G++ S +A + E+I TG
Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220
Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + L ++L L + + R S ++P+ + PE+IQ + E +
Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273
Query: 210 AIHA 213
H
Sbjct: 274 MPHF 277
>gi|294085380|ref|YP_003552140.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664955|gb|ADE40056.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 439
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 22/142 (15%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
+ L G R L++ C C FC G+ + L + +AA A +
Sbjct: 142 EMASHMLDGFQE--HTRAFLQIQQGCDHRCTFCIIPYGRGNNRSAGL-HQIIDAAQALV- 197
Query: 140 EKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQR 191
E++ TG D I S RL ++++ LR I + LR S +DP
Sbjct: 198 -DGGACEIVLTGVD--ITSWGSDLAGRPRLGRLVRALLREIPALPRLRLSS----IDPAE 250
Query: 192 INPELIQCLKEAGKPVYIAIHA 213
+ EL+ L + + + H
Sbjct: 251 GDAELMAVLGDDDR---LMPHF 269
>gi|197303393|ref|ZP_03168432.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
29176]
gi|197297391|gb|EDY31952.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
29176]
Length = 490
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 67/162 (41%), Gaps = 32/162 (19%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
Q + + I + D I + P++ +Y + + ++ C +C +C + G ++
Sbjct: 169 QSDRMVIDIWKDTDKIVE--DLPVE---RKYSFKSGVNIMFGCNNFCSYCIVPYVRGRER 223
Query: 123 GTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLR 170
+ ++ E +A + EV+ G + P+ ++L+ +
Sbjct: 224 SRDPKAIVREIERLVA-----DGVVEVMLLGQNVNSYGKNLEHPMTF-----AQLLQEIE 273
Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
I+ ++ +RF + P+ ++ ELI+ + + K + +H
Sbjct: 274 KIEGLERIRFMTSH----PKDLSDELIEVMSRS-KKICRHLH 310
>gi|218782479|ref|YP_002433797.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans
AK-01]
gi|218763863|gb|ACL06329.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans
AK-01]
Length = 359
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 70/220 (31%), Gaps = 53/220 (24%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C + C+FC +S +L + SQI +V T DP L +
Sbjct: 115 GCAMGCKFC------------CTASMGLTRSLQANEIISQIRDVQATMEDPEHLRNLVFM 162
Query: 164 KVLKTLRYIKHVQI-----------LRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIA 210
+ + L +V+ LRF R + L+ + GK V +A
Sbjct: 163 GMGEPLANWDNVKQAMDIITDNDWGLRFSGRRVTIS----TVGLVPKMAAVGKDTRVKLA 218
Query: 211 IHANHP-YEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILAN 256
+ N P E EE + A G + + VLLKG+ND P
Sbjct: 219 VSLNAPDNEIRDQIMPVNKKHPIEELLQACKDFPLRPGRRVTFEYVLLKGVNDSPAHARK 278
Query: 257 LMRTFV----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
L + ++ + PY S F E
Sbjct: 279 LGKLLAHQPCKINLIPY------NPHENSPFERPDPEAVD 312
>gi|73668263|ref|YP_304278.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
gi|72395425|gb|AAZ69698.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
Length = 377
Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R +++ CP C++C + G + +++ + L +I
Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSVDSIVKNAGYYNDLRFIASN-----AFGY 197
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + +++K+L L + +I F + V P+ + E ++ +++
Sbjct: 198 GSDGIHPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTDESVELVRKY 249
>gi|319902104|ref|YP_004161832.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
helcogenes P 36-108]
gi|319417135|gb|ADV44246.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
helcogenes P 36-108]
Length = 432
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G K ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVKYLVAEGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + I V+ +R H P P EL + ++E
Sbjct: 196 GVD--LYKKQMLPELIEHISEIPGVEWIRLHYAYPAHFPM----ELFRVMRERSN 244
>gi|302671353|ref|YP_003831313.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
B316]
gi|302395826|gb|ADL34731.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
B316]
Length = 479
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---E 146
D ++ L + H C + C++CF E + +++ + +AAL ++ + S E
Sbjct: 114 RDTVIKALCLNIAHDCNLRCKYCFADEGEYHGRRALMTEEVGKAALDFLIKNSGNRRNLE 173
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRF 180
V F GG+PL ++ + ++K+++ R I +H + RF
Sbjct: 174 VDFFGGEPL-MNWEVVKKIVEYGRSIEKEHNKNFRF 208
>gi|269929314|ref|YP_003321635.1| Radical SAM domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269788671|gb|ACZ40813.1| Radical SAM domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 519
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 66/199 (33%), Gaps = 43/199 (21%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---------LKLLHVCPVYCRFC 112
P +L+ LP P D P RY D L + CP +C +C
Sbjct: 176 PDIRDLDALPF----PAWDLVDVP------RYRDIWLRRHGYFSMNMVTTRGCPFHCNWC 225
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ + Q+ S ++ A L ++++ Q + F D + L LQ+ +
Sbjct: 226 AKP--IWGQRYNARSPENVAAELKWLRDNYQPDHIWFV-DDIMGLKPGWLQRYADEVE-- 280
Query: 173 KHVQILRFHSRVPIVDPQRIN----PELIQCLKEAGKPVYIAIHANHPYEF--------- 219
R R P R++ + I+ L AG + +
Sbjct: 281 ------RLGVRTPFKSLHRVDLLLRGDTIEALARAGAQIVWVGAESGSQRILDAMEKGTK 334
Query: 220 SEEAIAAISRLANAGIILL 238
E+ + RL AGI +
Sbjct: 335 VEQIVEVARRLHAAGIQVG 353
>gi|34541783|ref|NP_906262.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
gi|34398101|gb|AAQ67161.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
Length = 444
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C +C +C R +++ + AA + +I
Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + +L+ L ++ ++ R S ++P ++ ELI + +
Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260
Query: 210 AIH 212
H
Sbjct: 261 HFH 263
>gi|56419305|ref|YP_146623.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
gi|56379147|dbj|BAD75055.1| molybdopterin cofactor biosynthesis protein [Geobacillus
kaustophilus HTA426]
Length = 341
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
L ++ C C +C E+ G + +L+ ++ A LA + + ++ TGG+
Sbjct: 22 LSVIDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ L +++ L I ++ +
Sbjct: 81 PLLRRD--LDALIERLSMIPGLRDV 103
>gi|313114955|ref|ZP_07800450.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622715|gb|EFQ06175.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 431
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 18/119 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R +K+ C C +C G + A L + S EV+ +
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--DEASILAELRQLAA-SGYREVVLSAIS 197
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L ++++ ++ +Q +R S +DP + PE I L K
Sbjct: 198 LPSYGLDTGT----NLVELVEHCAQVEGIQRIRLGS----LDPDMLTPEFITRLAAVEK 248
>gi|310828943|ref|YP_003961300.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
gi|308740677|gb|ADO38337.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
Length = 472
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 73 EREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
E ED + +S K I + Y +RI+ L L + C C +C + L+
Sbjct: 60 ELEDE-NEKMYSLAKKIKQKFYGNRIVMFAPLYLSNYCINGCVYCPYHRQNKHIRRKKLT 118
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
++ + +Q+ + TG DP + + + +KT+ IKH
Sbjct: 119 QEEIRDEVIALQDMGHKRLALETGEDPANNPIEYVLESIKTIYGIKH 165
>gi|306840468|ref|ZP_07473227.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2]
gi|306289483|gb|EFM60701.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2]
Length = 314
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 25/163 (15%)
Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+ C C +C M K +L+ ++ + + E + ++ TGG+PL+ K
Sbjct: 1 MTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV--RK 57
Query: 161 RLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ ++ L + + + S++ R EL C + + +++
Sbjct: 58 NIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLDTL 109
Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 110 NPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 152
>gi|306843858|ref|ZP_07476453.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1]
gi|306275613|gb|EFM57337.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1]
Length = 344
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 182
>gi|298242300|ref|ZP_06966107.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
44963]
gi|297555354|gb|EFH89218.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
44963]
Length = 502
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 21/165 (12%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
R +P + P ER H P K + L ++ C C +C
Sbjct: 174 RTVLPMA--ITPKPGERI------AHYPTKIEPKKASPTAWLPIVLGCNKVCTYCIVPYR 225
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIK 173
G ++ + EA L + ++ + T G D + + L ++ +L I
Sbjct: 226 RGRERSRPIDELMIEARLLVEKGAKEVTLLGQTIESYGLD--LANQPNLADLMTSLSEID 283
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHANH 215
+ +RF + P + +I+ + K + I + A H
Sbjct: 284 GLDRIRFMTSYPRY----MTDSMIERMASLPKVCEHLNIPVQAGH 324
>gi|290955780|ref|YP_003486962.1| hypothetical protein SCAB_12261 [Streptomyces scabiei 87.22]
gi|260645306|emb|CBG68392.1| putative hypothetical protein [Streptomyces scabiei 87.22]
Length = 417
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 83 HSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYI 138
+P G Y + +LK+ C + C +C+ K ++ + E I
Sbjct: 2 MTPAPGHQPQAYLRQFVLKVHSRCNLDCDYCYVYHSADTSWRDKPRLMDAAVAERVAGRI 61
Query: 139 QEKSQIWE-----VIFTGGDPLILSHKRLQKVLKTL------RYIKHVQILRFHSRVPIV 187
E + + ++ GG+PL+L +RL+++L L + +RF ++ V
Sbjct: 62 AEHATAHDLPDVGIVLHGGEPLLLGARRLEELLGILGRCLAKAGVP----VRFSAQTNGV 117
Query: 188 DPQRINPELIQCLKEAGKPVYIAI 211
+ P+++ L V +++
Sbjct: 118 L---LTPDILDVLLRHRVDVSVSL 138
>gi|156741565|ref|YP_001431694.1| radical SAM domain-containing protein [Roseiflexus castenholzii DSM
13941]
gi|156232893|gb|ABU57676.1| Radical SAM domain protein [Roseiflexus castenholzii DSM 13941]
Length = 364
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTGGDP 154
++ C + CR C M + E ++ ++++ + ++I TGGDP
Sbjct: 27 WEMTQACALACRHCRAEAMPQPHPLQLT----FEESVRFLRQIPDFGNPLPQLILTGGDP 82
Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L ++ R + V I P P + ++ LK G
Sbjct: 83 LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRAMLAALKAHG 124
>gi|160877069|ref|YP_001556385.1| radical SAM domain-containing protein [Shewanella baltica OS195]
gi|160862591|gb|ABX51125.1| Radical SAM domain protein [Shewanella baltica OS195]
gi|315269273|gb|ADT96126.1| Radical SAM domain protein [Shewanella baltica OS678]
Length = 295
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC K + LA Q + + V GD +
Sbjct: 19 LILQVTNGCSWNLCSFCDMYTQPQKAFRAQKLDKVEQDILAVAQSGAPVSRVFLADGDAM 78
Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
L RL+ + + + R++ V +R+ P+ + PE + L+E G +
Sbjct: 79 SLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132
Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
+ E E ++AA+ ++ AG +++L+
Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174
>gi|332528805|ref|ZP_08404782.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
ATCC 19624]
gi|332041871|gb|EGI78220.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
ATCC 19624]
Length = 367
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ G +L+ ++ + ++ TGG+
Sbjct: 33 ISVTDRCNFRCSYCMPKEVFTKDYPYLPHGDLLTFEEIARLARAFVS-LGVRKIRLTGGE 91
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++ +++ L I
Sbjct: 92 PLL--RKNIEALIEQLADI 108
>gi|170724452|ref|YP_001758478.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
gi|169809799|gb|ACA84383.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
Length = 328
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
L + C C +C + ++ VLS ++ LA++ + + + ++ TGG+PL
Sbjct: 17 LSVTDRCDFRCVYCMSEDPCFLERDQVLSLEE----LAWVGQAFTELGVKKIRLTGGEPL 72
Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
+ + RL K+L L + + + SR+ + Q ++ +G + I++
Sbjct: 73 VRTDCDRLVKLLGELPGLTELSMTTNGSRL---------TKFAQKMRGSGLARLNISLDT 123
Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
P F++ I AG + +V+L+G NDD
Sbjct: 124 LKPELFTDLTRNGKLERVIQGIDAAKAAGFKRIKINAVILRGQNDD 169
>gi|71907628|ref|YP_285215.1| radical SAM:molybdenum cofactor synthesis C-terminal [Dechloromonas
aromatica RCB]
gi|71847249|gb|AAZ46745.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
Length = 357
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 24/176 (13%)
Query: 89 IVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
++ +Y R + L + C C +C EM + V+S ++ + +
Sbjct: 34 LLDKYGRRITYVRLSITDRCDFRCTYCMAEEMTFLPRKEVMSLEECLRVASVFVG-LGVT 92
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
++ TGG+PL+ +++ L + ++ L V + ++ + L AG
Sbjct: 93 KLRITGGEPLVRKGAM--WLIERLGALPGLENL-----VLTTNGSQL-DKFAAPLHAAGV 144
Query: 205 KPVYIAIHANHPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250
K + I++ F I G L+ +V+++G NDD
Sbjct: 145 KRINISLDTLKADRFRAITRIGDLAKVLRGIEAARATGFRRTKLN-AVMMRGTNDD 199
>gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
Length = 457
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 21/128 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ ++ C YC +C V S+ + L I + EV G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202
Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L + +++ + I ++ +R+ + P+ LI +
Sbjct: 203 VNAYRGALTAGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258
Query: 205 KPVYIAIH 212
K + +H
Sbjct: 259 K-LVNHLH 265
>gi|260893907|ref|YP_003240004.1| Radical SAM domain protein [Ammonifex degensii KC4]
gi|260866048|gb|ACX53154.1| Radical SAM domain protein [Ammonifex degensii KC4]
Length = 382
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
++ C + CR C+ G G + + E A +IQ K+++ ++F+GG+P
Sbjct: 31 VVWNSTRACNLRCRHCYASATPGPAPGEMTT----EEARRFIQGLAKTEVPVLLFSGGEP 86
Query: 155 LILSH 159
L+
Sbjct: 87 LLRPD 91
>gi|188585754|ref|YP_001917299.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350441|gb|ACB84711.1| Radical SAM domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 327
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C + C+ C+R G L++++ + L I+ + +IF+GG+PL
Sbjct: 3 VSWNTTKSCHLNCKHCYRDA--GEADSRELTTEEGKKLLDEIK-TAGFKLIIFSGGEPLE 59
Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+ K++ + I LR + I ++ + LKEAG + I++ +
Sbjct: 60 RQD--IYKLVSYAKKIG----LRPVLGTSG-----TTITRKVARKLKEAGAVRLGISLDS 108
Query: 214 NHPYEFSEEAIA 225
HP E ++
Sbjct: 109 VHP-EVHDDFRQ 119
>gi|333030363|ref|ZP_08458424.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
coprosuis DSM 18011]
gi|332740960|gb|EGJ71442.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
coprosuis DSM 18011]
Length = 431
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQI-WEVIFT 150
LK+ C C +C + G K +D + + +E I E+ +
Sbjct: 137 AYLKISEGCDRTCSYCAIPIITG--KHVSRPMEDILDEVKLLVGQGVREFQVIAQELTYY 194
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
G D + +RL ++++ + I V+ +R H P P +L++ ++E
Sbjct: 195 GVD--LYKKQRLPELIERMAAIPGVEWIRLHYAYPAHFPY----DLLRVMRE 240
>gi|322382440|ref|ZP_08056337.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153584|gb|EFX45970.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 439
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
Y + L + H C + C +CF + + ++S + + A+ Y+ E + +V F
Sbjct: 68 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 127
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ K +++++ R
Sbjct: 128 FGGEPLMA-WKVVKQIVAYARS 148
>gi|303231379|ref|ZP_07318113.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-049-V-Sch6]
gi|302513975|gb|EFL55983.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
atypica ACS-049-V-Sch6]
Length = 268
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + + + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+G DPL L +L++++ I ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164
>gi|295687475|ref|YP_003591168.1| MiaB family RNA modification enzyme [Caulobacter segnis ATCC 21756]
gi|295429378|gb|ADG08550.1| RNA modification enzyme, MiaB family [Caulobacter segnis ATCC
21756]
Length = 448
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +E+ D + H + G+ L + C +C FC G + ++
Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184
E A + EV G + + L K+++ L I + +R+ +
Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLARIDGLDRIRYTTSH 243
Query: 185 P 185
P
Sbjct: 244 P 244
>gi|167462543|ref|ZP_02327632.1| Radical SAM domain protein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 422
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
Y + L + H C + C +CF + + ++S + + A+ Y+ E + +V F
Sbjct: 51 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 110
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ K +++++ R
Sbjct: 111 FGGEPLMA-WKVVKQIVAYARS 131
>gi|90422778|ref|YP_531148.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
gi|90104792|gb|ABD86829.1| Radical SAM [Rhodopseudomonas palustris BisB18]
Length = 473
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 15/126 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEK-SQIW-- 145
P + + C + C +C+ G K + Y
Sbjct: 87 LKPSAVYVNATERCNLNCTYCYIPADMRRDGIDMDGPTLLKALDTLDRYFSRHMPADRRP 146
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++IF G +PLI + + + K RF + + + + L G
Sbjct: 147 QIIFHGAEPLIAR----EAIFAAIDAFK--DRFRFGLQTNATL---LTDKAAEFLTSRGV 197
Query: 206 PVYIAI 211
+ +++
Sbjct: 198 GIGLSL 203
>gi|325919115|ref|ZP_08181174.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
gi|325550424|gb|EGD21219.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
Length = 344
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 41/187 (21%)
Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
+ RY P R L L ++ C C +C + V G LS E +
Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDAQQRLSFDQLETLVRAFVS- 72
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRV 184
+ +V TGG+PL+ L ++ L I ++ L R
Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLVARLTAIDGIEDLALTTNGTLLARQAVALRQAGLRR 130
Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVL 243
V ++PEL + + + + +A I+ AG L V+
Sbjct: 131 ITVSMDALDPELFRRMSGNRGEIA-------------QVLAGIAAAEQAGFQRLKINCVV 177
Query: 244 LKGINDD 250
+GIN+D
Sbjct: 178 QRGINED 184
>gi|304391259|ref|ZP_07373203.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130]
gi|303296615|gb|EFL90971.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130]
Length = 348
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
+ + C C +C +M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 33 VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRMCSAF-VDKGVRKLRLTGGEPLVRK 91
Query: 157 --------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
LS R L L + S++ + EL+ C E V
Sbjct: 92 GIMGLFRSLSRHRTSGALDELTLTTN------GSQL-----AKYASELVDCGVE-RVNVS 139
Query: 209 IAIHANHP--YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
I +H E + + + AG+ + +V LKG+N
Sbjct: 140 IDT-LDHAKFREITRWGDLGRVMEGLEAARAAGLAVKINAVALKGVN 185
>gi|294811786|ref|ZP_06770429.1| Radical SAM domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|294324385|gb|EFG06028.1| Radical SAM domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
Length = 877
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147
I+LK+ C + C C+ E T+ A+++ + E ++ V
Sbjct: 11 IVLKVHSRCDLACDHCYIYEHA-DHSWRNRPRAITDEAISWTALRLAEHAKNHALPSVSV 69
Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204
I GG+PL+ +RL++V L + V LR H+ ++ P ++ E G
Sbjct: 70 ILHGGEPLLAGTERLRRVCAELTSALDGVAALDLRIHTNGL-----QLGPRYLELFDEFG 124
Query: 205 KPVYIAI 211
V +++
Sbjct: 125 VRVGVSL 131
>gi|292493861|ref|YP_003529300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
Nc4]
gi|291582456|gb|ADE16913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
Nc4]
Length = 447
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 24/151 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153
+ ++ C YC FC V S+ + +A I + ++ + EV G +
Sbjct: 149 AFVSVMEGCSKYCSFC-----VVPYTRGEEISRPLDDVIAEIVDLAEQGVREVTLLGQNV 203
Query: 154 -----PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
P+ L ++ + I+ ++ +RF + P+ + LIQ E +
Sbjct: 204 NAYRGPMGEGDIADLALLITYVASIEGIERIRFTTSHPV----EFSDSLIQAFAEVPE-- 257
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILL 238
+ H + P + I L G +L
Sbjct: 258 -LVSHLHLPVQ---SGSDRILSLMKRGHTVL 284
>gi|282858466|ref|ZP_06267644.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
gi|282588758|gb|EFB93885.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
Length = 447
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
L C C +C+ + +S ++ + +I Q+ V T GG+PL+
Sbjct: 103 LAPTSSCNFVCPYCYEKSKPN----NTMSDSTIDSLIKFINGHEQVKTVGITWYGGEPLV 158
Query: 157 LSHKRLQKVLKTLRY 171
+ ++K+++ +
Sbjct: 159 A-FETIKKIVERIDS 172
>gi|257462243|ref|ZP_05626660.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D12]
gi|317059912|ref|ZP_07924397.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D12]
gi|313685588|gb|EFS22423.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
sp. D12]
Length = 348
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148
++ + + CP +C FC ++++ G + + +D + Y++ EV
Sbjct: 2 KHYNIPIFISHFGCPNHCVFCNQQKINGQETDIRV--EDIHRIVREYLKTLPKKSEKEVA 59
Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
F GG LS + ++ L+TL Y++ +Q +R +R P I E+++ LK+ G
Sbjct: 60 FFGGTFTGLSMELQREYLETLQEYMERGDIQGIRLSTR-----PDYIRKEILEQLKKYG 113
>gi|224825445|ref|ZP_03698550.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
gi|224602366|gb|EEG08544.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
Length = 354
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%)
Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
C V C FC M G L S + A +A + + +V+F G G+P
Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPAHNLDNV 162
Query: 162 LQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYE 218
L + L H+ + L + + DP R+ L Q + KP + +++H E
Sbjct: 163 LDAI-DLLGSDGHIGHKNLVLST---VGDP-RVFERLPQ---QHVKPALALSLHTTRA-E 213
Query: 219 FSEEAIAAISR-------------LANAGIILLSQSVLLKGINDDPEILANLMRTFVE-- 263
+ + R G + Q LL G+ND E + +R
Sbjct: 214 LRAQLLPRAPRYDPAELVALGEDYARRVGYPIQYQWTLLAGVNDTQEEMDAAVRLLKGKY 273
Query: 264 --LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
L I PY + G H++ E ++
Sbjct: 274 GVLNIIPY-----NSVEG-DHYQRPSAERIHLMKR 302
>gi|39998330|ref|NP_954281.1| radical SAM domain-containing protein [Geobacter sulfurreducens
PCA]
gi|39985276|gb|AAR36631.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
Length = 812
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R+F+ EL +P+ + DR+ +++ C CRFC
Sbjct: 204 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 251
Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+ + ++T A Y +I + + GD L+ +L L
Sbjct: 252 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 302
Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223
R+ S R+ + P R+ N EL++ ++ K + + EA
Sbjct: 303 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 346
Query: 224 IAAISRLANAGI 235
+ R+ N GI
Sbjct: 347 SERLRRVINKGI 358
>gi|134299776|ref|YP_001113272.1| MiaB-like tRNA modifying protein YliG [Desulfotomaculum reducens
MI-1]
gi|238065335|sp|A4J5U4|RIMO_DESRM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|134052476|gb|ABO50447.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum
reducens MI-1]
Length = 444
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 27/142 (19%)
Query: 79 GDNNHSPLKGIVHRYPD-----------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
G + H+ ++ +++ Y + +K+ C C +C
Sbjct: 119 GKDRHTRVEDLLYIYDEHSPRLLSTPSYTAYVKIAEGCDNRCAYC-----AIPDIRGKFR 173
Query: 128 SKDTEAALAYIQEKSQ--IWEVIFTGGD----PLILSHK-RLQKVLKTLRYIKHVQILRF 180
S+ E+ A +++ + + E+I D L L + RL ++L+ L I+ +Q +R
Sbjct: 174 SRPIESIEAEVKDLVEKGVREIILIAQDTTRYGLDLYGEYRLDQLLERLGPIQGLQWIRL 233
Query: 181 HSRVPIVDPQRINPELIQCLKE 202
P R +LI+ + E
Sbjct: 234 ----LYCYPNRFTDQLIKAMAE 251
>gi|189347396|ref|YP_001943925.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
gi|189341543|gb|ACD90946.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
Length = 376
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWE 146
++ + P + + + + C + CR C+ S + +T L + +E ++ +
Sbjct: 5 LIMKTPRSVDIDITNRCNLRCRHCY----YYSSDAETPTELETAEWLRFFRELNECSVLR 60
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
V+ GG+P + ++++ + +RF
Sbjct: 61 VVLAGGEPFMRED--FRELIDGIVK----NRMRFG 89
>gi|229084333|ref|ZP_04216614.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
gi|228698990|gb|EEL51694.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
Length = 468
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 58 RQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKLLHVCPVYCRFCFRR 115
R+ I EEL N ED + + + Y + L + H C + C +CF
Sbjct: 63 RETIADIEELKNDRQLFTED---EYKSLSIDLTNRKTYVKALCLNVAHTCNLSCEYCFAS 119
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ + ++S + + A+ Y+ E + ++ F GG+PL+ K +++++ R
Sbjct: 120 QGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDFFGGEPLMA-WKVVKQIVAYARS 177
>gi|320353874|ref|YP_004195213.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
DSM 2032]
gi|320122376|gb|ADW17922.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
Length = 295
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVI 148
++L++ C C FC G+ + SK E A A+ + + +
Sbjct: 23 LILQVTTGCSHNRCTFC------GAYRDKPFQSKSWEQIEADLAFAAAWCRRQ---TTLF 73
Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178
GD L L H+RL +L+ +R + ++ +
Sbjct: 74 LADGDVLALPHERLVALLERIREQLPWIRRV 104
>gi|119773547|ref|YP_926287.1| hypothetical protein Sama_0407 [Shewanella amazonensis SB2B]
gi|119766047|gb|ABL98617.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 294
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 97 ILLKLLHVCP-VYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
++L++ + C CRFC ++ ++ + D + A I V
Sbjct: 18 LILQVTNGCSYNRCRFCDMYTAEQKRFRAFKEDKI--EADLKQAA---ASGVPIRRVFLA 72
Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178
GD + L RL+ +L + RY+ V +
Sbjct: 73 DGDAMTLPFSRLEAILLLIHRYLPDVSRI 101
>gi|34581161|ref|ZP_00142641.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262546|gb|EAA26050.1| unknown [Rickettsia sibirica 246]
Length = 445
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VFR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|313680864|ref|YP_004058603.1| 23S rRNA m(2)a-2503 methyltransferase [Oceanithermus profundus DSM
14977]
gi|313153579|gb|ADR37430.1| 23S rRNA m(2)A-2503 methyltransferase [Oceanithermus profundus DSM
14977]
Length = 370
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 40/199 (20%)
Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148
Y DR + + CP C FC +M + T D A+AY Q +I V+
Sbjct: 124 YADRKTVCISSQVGCPAGCTFCATGKMGFGRNLTGPEILDQILAVAYHQGLGPREIRNVV 183
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLK 201
G G+PL L+++ + ++ + + P+RI P I+ L
Sbjct: 184 LMGMGEPL-LNYENIAWAVRRMLDKN----------ALAMSPRRITLSTVGIPGGIRRLA 232
Query: 202 E--AGKPVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVLLK 245
E G + +++HA H Y +E EA+ A + + +L+
Sbjct: 233 EGDLGVKLALSLHAPDDETRRRIIPTAHRYSIAEIMEAVRAYFDRTKRRVTIE--YTMLR 290
Query: 246 GINDDPEILANLMRTFVEL 264
+ND E L R L
Sbjct: 291 DVNDREEQARELARILKGL 309
>gi|313886783|ref|ZP_07820489.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923747|gb|EFR34550.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
PR426713P-I]
Length = 454
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
R LK+ C YC +C G S+ G++ S +A + E+I TG
Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220
Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + L ++L L + + R S ++P+ + PE+IQ + E +
Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273
Query: 210 AIHA 213
H
Sbjct: 274 MPHF 277
>gi|313203633|ref|YP_004042290.1| miab-like tRNA modifying enzyme [Paludibacter propionicigenes WB4]
gi|312442949|gb|ADQ79305.1| MiaB-like tRNA modifying enzyme [Paludibacter propionicigenes WB4]
Length = 436
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 26/146 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
R LK+ C +C +C R + ++ + EA E+
Sbjct: 148 RTRYFLKVQDGCDYFCTYCTIPYARGRSRNATIPETVAMAMQAVEAGA---------KEI 198
Query: 148 IFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +G GD + + ++K L I R S ++P + E+I + +
Sbjct: 199 VLSGVNIGDFGKSTGESFFDLVKALDTIPADVRFRISS----IEPNLLTDEIITYISTSH 254
Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
+ H + P + E + + R
Sbjct: 255 R---FMPHFHIPLQSGTNEVLQLMKR 277
>gi|253701529|ref|YP_003022718.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
gi|251776379|gb|ACT18960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
Length = 326
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + V + +LS ++ + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
K L L+ L + ++ L + E+ Q LK AG + I++
Sbjct: 74 -RKGLVPFLERLSRVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121
Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250
E A I+R L AG L V+++G+NDD
Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169
>gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis
Il1403]
gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403]
Length = 275
Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKH 174
P++ +L ++ L K+
Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86
>gi|301627665|ref|XP_002942990.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like [Xenopus
(Silurana) tropicalis]
Length = 649
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
G H Y + + L C + C++C E V + L + ALA + + + ++
Sbjct: 69 GRQHNY---LRISLTEKCNLRCQYCMPEEGVQLTPKSELLTTQEIVALARLFVQEGVNKI 125
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PLI ++ LR ++ ++ +
Sbjct: 126 RLTGGEPLIRPDVV--DIVAQLRKLEGLKTI 154
>gi|283471147|emb|CAQ50358.1| conserved protein YfkA [Staphylococcus aureus subsp. aureus ST398]
Length = 383
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 16/126 (12%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGIYIQMNS 117
Query: 185 PIVDPQ 190
+ PQ
Sbjct: 118 NLTLPQ 123
>gi|289192724|ref|YP_003458665.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
gi|288939174|gb|ADC69929.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
Length = 280
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y ++LK+ + C + C +C+ ++ + K ++A+ Y+ ++ FTG
Sbjct: 2 KY---LILKVTNRCNLNCLYCY----ANNENNKDMDFKTAKSAIDYLLSLDNNLKIQFTG 54
Query: 152 GDPLILSHKRLQKVLK 167
G+PL L+ K ++KV+
Sbjct: 55 GEPL-LNFKLIEKVVD 69
>gi|229825006|ref|ZP_04451075.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
49176]
gi|229790753|gb|EEP26867.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
49176]
Length = 449
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 27/131 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+R +K+ C +C +C R + ++ ++T+ + + E++
Sbjct: 145 KNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGIV--EETDRLVK-----AGFREMVL 197
Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
T G D I R+ ++L L ++ +R S V+P+ I E ++ L +
Sbjct: 198 TGIHIGSYGRD--IDGESRMLELLTELNKVEGDFRIRLGS----VEPRLITEEFLEGLVK 251
Query: 203 AGKPVYIAIHA 213
K + H
Sbjct: 252 LKK---VCPHF 259
>gi|188995948|ref|YP_001930200.1| putative Fe-S oxidoreductase [Porphyromonas gingivalis ATCC 33277]
gi|188595628|dbj|BAG34603.1| putative Fe-S oxidoreductases [Porphyromonas gingivalis ATCC 33277]
Length = 444
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C +C +C R +++ + AA + +I
Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD + + +L+ L ++ ++ R S ++P ++ ELI + +
Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260
Query: 210 AIH 212
H
Sbjct: 261 HFH 263
>gi|187932848|ref|YP_001886192.1| thiamine biosynthesis protein ThiH [Clostridium botulinum B str.
Eklund 17B]
gi|187721001|gb|ACD22222.1| putative thiazole biosynthesis protein [Clostridium botulinum B
str. Eklund 17B]
Length = 472
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 80 DNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
+ H K I + Y +RI+ L L + C C +C L+ ++ +
Sbjct: 66 EKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQNKHISRKKLTQEEIKRE 125
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 126 VIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165
>gi|168206414|ref|ZP_02632419.1| putative radical SAM domain protein [Clostridium perfringens E str.
JGS1987]
gi|170662155|gb|EDT14838.1| putative radical SAM domain protein [Clostridium perfringens E str.
JGS1987]
Length = 370
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP I +K+ C C+ CF + +SS + + +++ +++ TGG
Sbjct: 42 YPILIGIKITDKCNFSCKHCFSN----NSNFNEISSNLVDNIINNFLKENHPYKIYLTGG 97
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+P + +K + +++ L+ + +I HS I +L + L
Sbjct: 98 EPFL--NKNIFNIIQKLK--PYCKIFSIHSNA-----SLITNDLAKKLSN 138
>gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis CV56]
Length = 275
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKH 174
P++ +L ++ L K+
Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86
>gi|291563521|emb|CBL42337.1| SSU ribosomal protein S12P methylthiotransferase
[butyrate-producing bacterium SS3/4]
Length = 445
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 10/109 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
LK+ C C +C + G + + + + EK ++ L
Sbjct: 146 AFLKIAEGCDKRCTYCIIPYLRGKYR--SVPMEQLVREAEELAEKGVKELILVAQETTLY 203
Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
K+L ++L+ L + +Q +R P+ I ELI+ +K
Sbjct: 204 GKDLYGEKKLPELLRRLAAVSGIQWIRLQ----YCYPEEITDELIETIK 248
>gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
subsp. lactis KF147]
gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis
subsp. lactis KF147]
Length = 275
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKH 174
P++ +L ++ L K+
Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86
>gi|213963740|ref|ZP_03391990.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
sputigena Capno]
gi|213953620|gb|EEB64952.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
sputigena Capno]
Length = 454
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 98 LLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
L L C C FC R EM VL K+ + +++E+ +I E+
Sbjct: 54 LYIHLPFCESLCTFCGCHKRITKRHEMEIPYIEAVL--KEWQLYTDFLKERPRIKEIHLG 111
Query: 151 GGDPLILSHKRLQKVLKTL 169
GG P +L+++++ +
Sbjct: 112 GGTPTFFQPSQLRRLIEGI 130
>gi|170729111|ref|YP_001763137.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
gi|169814458|gb|ACA89042.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
51908]
Length = 326
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + + L+ + E +A E ++ TGG+P +
Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPNGRSKFLALSEIENLVAAFAE-VGTQKIRITGGEPTLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + + +I + + R+ + + + +++ + P
Sbjct: 76 D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I +AG + +VLLKG+ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALDAGFERVKINAVLLKGLND 168
>gi|90022940|ref|YP_528767.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saccharophagus
degradans 2-40]
gi|122995883|sp|Q21FH4|MIAB_SACD2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|89952540|gb|ABD82555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Saccharophagus degradans
2-40]
Length = 454
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 13/113 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ ++ C YC FC G + + D + ++ + + EV G +
Sbjct: 156 TAFVSVMEGCSKYCTFCVVPYTRGEEVSR--PAVDVLREVTHLASQ-GVREVNLLGQNVN 212
Query: 156 ILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
L +++ + I + +RF + P LIQ E
Sbjct: 213 AYRDDSSGEVIDLAELIAAVADIDGIDRIRFTTSH----PMEFTESLIQAYAE 261
>gi|326204016|ref|ZP_08193877.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
gi|325985783|gb|EGD46618.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
Length = 456
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + C CR+C+ + + L+ ++ + ++++++TGG+
Sbjct: 114 PKTISFHVTSTCNKECRYCYLDAKRENLEKDALTFEEVVRMIDE-AAAIGVYKILYTGGE 172
Query: 154 PLILSHKRLQKVLK 167
P + L +++
Sbjct: 173 PFLRKD--LLDIIE 184
>gi|304316648|ref|YP_003851793.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778150|gb|ADL68709.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 452
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C +C +C + + S+ + L ++ + EVI TG
Sbjct: 161 HTRAYLKIQDGCNQFCTYC-----IIPYARGPVRSRRPDNILDEVKRLRDNGYKEVILTG 215
Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + L ++K + + ++ +R S P + I+ + K
Sbjct: 216 IHVASYGKDLENINLLDIIKMIHEVDGIERIRMSSIEPTFL----TEDFIKEVASLPK 269
>gi|221232993|ref|YP_002515429.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
crescentus NA1000]
gi|220962165|gb|ACL93521.1| tRNA 2-methylthioadenosine synthase [Caulobacter crescentus NA1000]
Length = 448
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
+ +E+ D + H + G+ L + C +C FC G + ++
Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184
E A + EV G + + L K+++ L I + +R+ +
Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLAKIDGLDRIRYTTSH 243
Query: 185 P 185
P
Sbjct: 244 P 244
>gi|157826266|ref|YP_001493986.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
gi|229890630|sp|A8GQ03|MIAB_RICAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157800224|gb|ABV75478.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
Length = 445
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 26/137 (18%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDNLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQI----WEVIFTGGDPLILSHK-------RLQKVLKTLRYIKHVQILRFHS 182
Y + + E++ G + + K L +LK L I +++ LR+ +
Sbjct: 186 V--YREALQVVSGGAKEIMLLGQNVNAYNWKGSADKIFSLADLLKHLAQIPNLERLRYMT 243
Query: 183 RVPIVDPQRINPELIQC 199
PI + +LIQ
Sbjct: 244 SHPID----MTDDLIQL 256
>gi|325955310|ref|YP_004238970.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922]
gi|323437928|gb|ADX68392.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922]
Length = 444
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 23/131 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C C +C + K+ I E++ TG
Sbjct: 144 RTRAFLKVQDGCDYKCTYCTIPLARGISRSDELHNVLKNAREI-----ANQDIKEIVLTG 198
Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GD ++++ L + +++ +R S ++P + E I + +
Sbjct: 199 VNIGDYGKGEFGNKKHEHTFLELVEALDEVDNIERIRISS----IEPNLLKNETISFVAQ 254
Query: 203 AGKPVYIAIHA 213
+ + H
Sbjct: 255 SKR---FVPHF 262
>gi|299145602|ref|ZP_07038670.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
gi|298516093|gb|EFI39974.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
Length = 436
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ + ++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300
>gi|253999825|ref|YP_003051888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
gi|313201799|ref|YP_004040457.1| tRNA-i(6)a37 thiotransferase enzyme miab [Methylovorus sp. MP688]
gi|253986504|gb|ACT51361.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
gi|312441115|gb|ADQ85221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. MP688]
Length = 443
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 22/135 (16%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQI 144
H P R+ L ++ C YC FC V +G S + + IQ + +
Sbjct: 140 HLPPPRVEGAAAFLSIMEGCNKYCSFCV----VPYTRGEEFSRPFEDILVEAIQLAEQGV 195
Query: 145 WEVIFTGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
E+ G + + L ++ + I ++ +RF + P ++ LI
Sbjct: 196 KEITLLGQNVNAYRSTSADGTAADLAMLIDYIAEIPQIERIRFTTSH----PNEMSEALI 251
Query: 198 QCLKEAGKPVYIAIH 212
C K + +H
Sbjct: 252 DCFARIPK-LVSHLH 265
>gi|210134483|ref|YP_002300922.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12]
gi|210132451|gb|ACJ07442.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12]
Length = 418
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQIAGLKRIRIGS 221
>gi|78222909|ref|YP_384656.1| cobalamin B12-binding/radical SAM family protein [Geobacter
metallireducens GS-15]
gi|78194164|gb|ABB31931.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15]
Length = 434
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R IP + L I P R D + +Y ++ CP C FC
Sbjct: 132 PLYRAPIPTDDRLVI-PWSRRDILA----------GRQYLTTQTVQASRGCPYDCPFCT- 179
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRY 171
V G ++ + LA ++ V GDP+ +L+ +
Sbjct: 180 ---VTPYFGRTFRYRNPDDVLAELRSFEGKLMVFVDDNILGDPVRAKP-----ILEGMAG 231
Query: 172 IKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEE 222
+ LR+ + + R +PEL++ + +G HANH +
Sbjct: 232 M----NLRWGGQANL----RFAEDPELVKLVARSGCIGIFVGIESVTGPHANHAKTGNGS 283
Query: 223 AI-AAISRLANAGIIL 237
+ + R+ +AGI+L
Sbjct: 284 SQIDLVKRVRDAGIVL 299
>gi|332882828|ref|ZP_08450439.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679330|gb|EGJ52316.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 435
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C C +C + S E L+ + I E++ TG
Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENILSNAKKISDKGIKEIVLTG 194
Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GD ++++ L ++ ++ LR S ++P I E I + +
Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVEALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250
Query: 203 AGKPVYIAIHA 213
+ H
Sbjct: 251 SN---SFVPHF 258
>gi|332673126|gb|AEE69943.1| possible 2-methylthioadenine synthase [Helicobacter pylori 83]
Length = 418
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + K E + + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|332526652|ref|ZP_08402757.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
benzoatilyticus JA2]
gi|332110913|gb|EGJ11090.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
benzoatilyticus JA2]
Length = 372
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F R +LS ++ + + ++ TGG+
Sbjct: 44 ISVTDRCNFRCGYCMPSEVFDRRYRFLPHDALLSFEEITRVASVFLAH-GVRKLRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
PL+ K+L +++ L ++ V
Sbjct: 103 PLL--RKQLPSLVEQLAALRTV 122
>gi|301053446|ref|YP_003791657.1| coenzyme PQQ synthesis protein [Bacillus anthracis CI]
gi|300375615|gb|ADK04519.1| coenzyme PQQ synthesis protein [Bacillus cereus biovar anthracis
str. CI]
Length = 404
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 36 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 91
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 92 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 142
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 143 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 202
Query: 261 F 261
Sbjct: 203 L 203
>gi|290474036|ref|YP_003466910.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004]
gi|289173343|emb|CBJ80120.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004]
Length = 326
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 40/218 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + E ++ TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPDGYHPHGHQSFLSLPEIRRVSRAFAELGT-EKIRLTGGEPTMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ T+ ++ + + R+ ++ + KEAG I + + P
Sbjct: 76 D--FCDIIATVHENPQIKKIAITTNG-----YRMERDVARW-KEAGLT-AINVSVDSLDP 126
Query: 217 YEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
+F I +AG + +VL+K +ND P LA + ++LR
Sbjct: 127 RQFHAITGQDKFFQIMRGIDAAFDAGFSAVKVNAVLMKNVNDTSLPAFLAWIKHRPIQLR 186
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+ G EG ++ + +SG
Sbjct: 187 ------FIELMETG---------EGSELFR--RRHLSG 207
>gi|317127531|ref|YP_004093813.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM
2522]
gi|315472479|gb|ADU29082.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM
2522]
Length = 371
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C + ++ L + L +++ + + TGG+P +
Sbjct: 30 VEFTTTNICNMRCEHCAVGYSLQTKDPEALPLELFTQRLDEVKD---LRALSITGGEP-M 85
Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179
+S K ++ + L H + +R
Sbjct: 86 MSMKSVKNYVLPLLKYAHERGIR 108
>gi|281420874|ref|ZP_06251873.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
gi|281405166|gb|EFB35846.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
Length = 536
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C YC +C G+ + + S E A A + +I
Sbjct: 239 RTRYFLKVQDGCNYYCTYCTIPFARGNSRNPSIQSLVAQCEQAAA--EGGKEIVITGVNI 296
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
GD +H+R ++K + ++ ++ R S ++P + +LI+ ++
Sbjct: 297 GDFGQTTHERFIDLVKAMDQVEGIKRYRISS----LEPDLCDDDLIEYCAQSR---AFMP 349
Query: 212 HA 213
H
Sbjct: 350 HF 351
>gi|217033424|ref|ZP_03438854.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10]
gi|216944129|gb|EEC23557.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10]
Length = 418
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + K E + + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|300814699|ref|ZP_07094949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
taxon 836 str. F0141]
gi|300511172|gb|EFK38422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
taxon 836 str. F0141]
Length = 467
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
G Y + + +++ C +C FC + S++ + + I+
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222
Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+ G + + + ++L + IK V+ +RF + P+ I+ ELI
Sbjct: 223 EITLLGQNVNSYGRGLENKTTFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278
Query: 201 KEAGK 205
++
Sbjct: 279 RDLDH 283
>gi|166031330|ref|ZP_02234159.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC
27755]
gi|166028735|gb|EDR47492.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC
27755]
Length = 308
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 82/222 (36%), Gaps = 47/222 (21%)
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ--KVLKTLRYIKHVQILRFH 181
+LS ++ E K+ I + TGG+PL+ RL +++ ++ I V+ +
Sbjct: 12 NILSYEEIEMVCQA-AAKAGIRKFKITGGEPLV----RLGCPELIGKIKKIPRVEQVTMT 66
Query: 182 SRVPI---VDPQRINPEL------IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
+ + P+ + L + L V E + ++ + +
Sbjct: 67 TNGVLLSKYLPELLKNGLDAVNISLDTLDRERYQV-----ITGRDELFR-VLESVDQAVD 120
Query: 233 AGIILLSQSVLLKGIN-DDPEILANL-MRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEE 289
AGI + SVL KG+N D+ L L + +++R + G F E
Sbjct: 121 AGIPVKINSVLQKGMNEDEFLALVRLTLEKKLDVR------FIEMMPIGLGKKFETIYNE 174
Query: 290 GQKIVASLKEKIS-----------GLCQPFYILDLPGGYGKV 320
I+ LK++ G Y+ LPGG G V
Sbjct: 175 --DILEELKKQYPDIQEDRQIHGNGPAV--YVK-LPGGQGSV 211
>gi|315924474|ref|ZP_07920696.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622353|gb|EFV02312.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 457
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 52/206 (25%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C FCF +M + T+ YI++ + ++ G+ + L++
Sbjct: 88 RRCSNGCIFCFIDQMPPGMRDTL-----------YIKDDDERMSFLY--GNYITLTN--- 131
Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
L + +I+R+H +PI ++ +H F+
Sbjct: 132 ------LSEAEKERIVRYHI-MPINISVHTTNPKLRR---------QMLH----NRFAGS 171
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAGTS 281
+ + I + SQ VL +ND E L RT + + P + G +
Sbjct: 172 VMDDLQFFQKHEIAMNSQIVLCPEVNDGEE----LTRTLGDLAGLYPQMRSVSVVPLGMT 227
Query: 282 HFR---LTI-----EEGQK---IVAS 296
FR + E+ ++ I+ +
Sbjct: 228 KFRKGLTPLKSVNREKARETIAIIEA 253
>gi|298507261|gb|ADI85984.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter sulfurreducens KN400]
Length = 831
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R+F+ EL +P+ + DR+ +++ C CRFC
Sbjct: 223 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 270
Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
+ + ++T A Y +I + + GD L+ +L L
Sbjct: 271 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 321
Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223
R+ S R+ + P R+ N EL++ ++ K + + EA
Sbjct: 322 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 365
Query: 224 IAAISRLANAGI 235
+ R+ N GI
Sbjct: 366 SERLRRVINKGI 377
>gi|297569134|ref|YP_003690478.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus
AHT2]
gi|296925049|gb|ADH85859.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus
AHT2]
Length = 848
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 83/227 (36%), Gaps = 55/227 (24%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
P+ R+ + E++ D+ +PL DR+ +++ C CRFC
Sbjct: 231 PVRRRVLADLEQV------------DHAVAPLVPATRVVHDRLGVEIARGCTRGCRFCQA 278
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ + S + L I++ ++ + + GD + ++ L +++ L
Sbjct: 279 GVIYRPVREREPSRV-LQEILGKIEQTGFEEVALLSLSSGDYACI-NELLGQLMDALER- 335
Query: 173 KHVQILRFHSRVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
R RV + P R+ PE+++ +K K + + EA +
Sbjct: 336 ------R---RVSVSLPSMRVGSLTPEMMEQIKRVRKTGFT---------LAPEAGS--D 375
Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR---IKPYYLH 272
RL V+ KGI E L R+ L IK Y++
Sbjct: 376 RLRR---------VINKGI--SEEDLLAASRSAFGLGWKLIKLYFMF 411
>gi|257065138|ref|YP_003144810.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256792791|gb|ACV23461.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 293
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 94 PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151
P LL++ C C+FC M + V S +D EA LA ++ +
Sbjct: 14 PTWPLLEITAGCTHNKCKFCT---MYKGVRFDVRSIEDIEADLAELRTMVPHARTIQLLS 70
Query: 152 GDPLILSHKRLQKVLKTLRY 171
G+PL L + RL+ +L+ +
Sbjct: 71 GNPLALPYSRLKPILEKINE 90
>gi|196041174|ref|ZP_03108469.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
NVH0597-99]
gi|196027882|gb|EDX66494.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
NVH0597-99]
Length = 377
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|114770160|ref|ZP_01447698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HTCC2255]
gi|114548997|gb|EAU51880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HTCC2255]
Length = 442
Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 75 EDPIGDN--NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
D ++ H P R P L + C +C FC + + +
Sbjct: 128 TDFPEEDKFEHLPAAPKTKRAPS-AFLTVQEGCDKFCAFCV-VPFTRGAEVSRPVLQIIN 185
Query: 133 AALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
A ++ + ++ G + + L +++K L I+ ++ +RF + P
Sbjct: 186 EARDLVER--GVRDITLLGQNVNAYHGAMKSGDANLPQLIKELSKIEELKRIRFTTSHPN 243
Query: 187 VDPQRINPELIQC 199
+ ELI
Sbjct: 244 D----MTQELIDA 252
>gi|329848315|ref|ZP_08263343.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
gi|328843378|gb|EGF92947.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
Length = 405
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 36/233 (15%)
Query: 104 VCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEVIFTG-GDPL 155
C + C FC + + + A + +E Q+ ++F G G+PL
Sbjct: 131 GCTLNCTFCHTGTQKLVRNLTAAEIVAQVQVARDDLGEWPSPKEDRQLSNIVFMGMGEPL 190
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
L V + I + + R V + PEL + I++HA +
Sbjct: 191 Y----NLDNVADAIDIISDNEGIALSRRRITVSTSGVVPELEALGNRTAAMLAISLHATN 246
Query: 216 P---YEFSEEAIAAISRLANAGI---ILLSQS-------VLLKGINDDPEILANLMRTFV 262
E AGI LS + V+LKG+ND P L++
Sbjct: 247 DTLRDEIVPLNKKYNIEALMAGIRAYPGLSNARRVTFEYVMLKGVNDSPAEARALIKLLK 306
Query: 263 ----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
++ + P +P + ++ + + A++ K +G P
Sbjct: 307 GIPAKINLIP---FNP---WPGTDYQCSDWTAIETFAAILNK-AGYASPIRTP 352
>gi|170290638|ref|YP_001737454.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174718|gb|ACB07771.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 326
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 46/240 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P R+ L L + C C C+ ++ LS++D + L I + +V FTGG+
Sbjct: 4 PLRVDLILTYRCNNDCIHCYSS---SPRETEELSTEDWKRVLK-IFHGLGVPQVTFTGGE 59
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
P L + L ++ + + V + + + ++ +L + L EAG
Sbjct: 60 P-TLR-EDLVDLVSEAQKLGMVSGI-------VTNGTLLSDDLSRRLVEAGLDYAQITLE 110
Query: 212 ------HANHPYEFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
H + + I + + G+ + S LLK + + + +R
Sbjct: 111 SKDPEVH----DSITGVRGSWERTVRGIKNMVSTGVYVSVNSTLLKM---NSPTILDTIR 163
Query: 260 TFVELRIKPYYLHHPDLA---AGTSHFRLTIEEGQKIVASLKEKI-------SGLCQPFY 309
EL + Y L + T + EE I+ KE + Y
Sbjct: 164 FVAELGVHGYSL--NRVIYSGRATLDMEPSFEEMINIITEAKELAIELDLDFTWYGVTRY 221
>gi|73667402|ref|YP_303418.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake]
gi|72394543|gb|AAZ68820.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake]
Length = 411
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 23/118 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R L+++ + C C FC + G + + E + +++ + EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGDNRSL-----NIEDIITKVRDCVNNGYNEVVFTG 180
Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
D +S L + L + ++ LR S + + + I +L+ +
Sbjct: 181 VD---ISDFGLDIYGQRVLGTMVKRVLSAVPQLRRLRL-SSIDVAE---IEDDLVDII 231
>gi|327541062|gb|EGF27613.1| molybdenum cofactor biosynthesis protein A [Rhodopirellula baltica
WH47]
Length = 359
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C + VL+ ++ E + ++ + ++ T
Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDADFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+PL+ +++ L I ++ L
Sbjct: 96 GGEPLVRRDCV--DLIQMLARIDGLEDL 121
>gi|294788304|ref|ZP_06753547.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453]
gi|294483735|gb|EFG31419.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453]
Length = 477
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
++++ C + C CF G+ + + E L I +V+ +GG+P I
Sbjct: 102 IVEINRACNLNCPVCFAS--SGTHQTEHYPIEIVEKMLDAIVANEGEPDVVQLSGGEPTI 159
Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
+ +L R IKH+ I +R + E ++ L ++G + I
Sbjct: 160 HP--QFFDILAAARKRPIKHLMINTNGVRIAQ----------DFEFVEKLAQSGLHGLEI 207
Query: 210 AIHANHP-YEFSEEAIAA-ISRLANAGIILLSQ----SVLL----KGINDD 250
+ + E ++ A +SR+ + L++ + L+ KG+ND
Sbjct: 208 YLQFDSLNNEVTQTLRGADLSRIRKQALDNLNRVGLSTTLVVTVAKGVNDH 258
>gi|170761673|ref|YP_001788384.1| radical SAM domain-containing protein [Clostridium botulinum A3
str. Loch Maree]
gi|169408662|gb|ACA57073.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 455
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL
Sbjct: 99 LNIAHDCNLRCKYCFADEGEYKGKRELMSPRVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
+ ++++++ + + H +I+RF
Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKIIRF 184
>gi|87310727|ref|ZP_01092854.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
3645]
gi|87286484|gb|EAQ78391.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
3645]
Length = 432
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 20/173 (11%)
Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFC 112
P +P E+ E D +G + + + DR +K+ C + C FC
Sbjct: 90 PAELAVLPNVVEVVENKREIPDLLGRFGVIDVPTGLSTFGDRHRAFVKVQDGCLLRCTFC 149
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLI--------LSHKR 161
+ SS++ A +A + + E++ TG G + R
Sbjct: 150 IIP--TVRPEMYSRSSEEIIAEVARLADN-GFREIVLTGIHLGHYGVDQNRGKSKAEWMR 206
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L ++++L + +R S + + + ELI+ + E V +H +
Sbjct: 207 LAHLVRSLARLDGDFRIRM-SSIEATE---VTRELIEVMGEFPDRVCPHLHIS 255
>gi|114565072|ref|YP_752586.1| molybdenum cofactor biosynthesis protein A [Shewanella
frigidimarina NCIMB 400]
gi|114336365|gb|ABI73747.1| molybdenum cofactor biosynthesis protein A [Shewanella
frigidimarina NCIMB 400]
Length = 328
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIW 145
R D + L + C C +C S+ T L L++I + + +
Sbjct: 9 QRKVDYLRLSVTDRCDFRCVYCM------SEDPTFLPKSHVLSLEELSWIAQAFTELGVK 62
Query: 146 EVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184
++ TGG+PL+ S +L K+L+ L ++ + + SR+
Sbjct: 63 KIRLTGGEPLVRSDCDKLVKLLRKLPQLEELSMTTNGSRL 102
>gi|312898217|ref|ZP_07757608.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis
F0359]
gi|310620714|gb|EFQ04283.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis
F0359]
Length = 322
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 17/135 (12%)
Query: 90 VHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
+H Y R + + + + C C FC + + S+ ++ + +
Sbjct: 15 IHPYKTREGGATVTVFVPYNCLNNCPFCINKAEY--ENPEGFSADKICESIRRMDAITPY 72
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ +FTGG+P L + + L I + ++ +P+ + Q + I E
Sbjct: 73 CDFVFTGGEPF----ADLNVLQQMLDEIPKTHKVYINTTLPVSEFQ--TEDDIVRFTEKN 126
Query: 205 KP----VYIAIHANH 215
K + ++ H H
Sbjct: 127 KDKITCINVSRHMQH 141
>gi|269798274|ref|YP_003312174.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
2008]
gi|269094903|gb|ACZ24894.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
2008]
Length = 472
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
+G DPL L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160
>gi|116754458|ref|YP_843576.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
gi|116665909|gb|ABK14936.1| Radical SAM domain protein [Methanosaeta thermophila PT]
Length = 377
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 39/198 (19%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
L + R PD+I + + CP C+ C + + + L +D + +
Sbjct: 85 VLASLGRRTPDQITISVTEECPNRCKHC---ALPDTGEHLSLEPEDVQRIIDQ-ALDLGS 140
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLK 201
+IF GG+P + + L +++ + R L + L+
Sbjct: 141 TLIIFDGGEPCMY--RELPELVSYVDD-----------RAVTTMFTSGAGFTDGLAKQLR 187
Query: 202 EAGKPVYIAIHANHPYE-----------FSEEAIAAISRLANAG--IILLSQSVLLKGIN 248
+AG + + + P E +A+ AI +AG + L V+L+
Sbjct: 188 DAGLQ-AVNVSLDSPLEEEHDAIRGRKGVYRDAMNAIKHALSAGLLVDLY---VVLRH-- 241
Query: 249 DDPEILANLMRTFVELRI 266
D+ L + ++ +
Sbjct: 242 DNIMHLQSFHELARKMGV 259
>gi|313836301|gb|EFS74015.1| radical SAM domain protein [Propionibacterium acnes HL037PA2]
gi|314928766|gb|EFS92597.1| radical SAM domain protein [Propionibacterium acnes HL044PA1]
gi|314971198|gb|EFT15296.1| radical SAM domain protein [Propionibacterium acnes HL037PA3]
gi|328906485|gb|EGG26260.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
oxidase [Propionibacterium sp. P08]
Length = 426
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 37/204 (18%)
Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P ++ ++ C + C+ C + Q + + +Y + + I
Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYEKPYPML---IL 101
Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD L +++ + HV + P V P + ++ +++AG +
Sbjct: 102 TGGDCFERPD--LVDLIEYGVSKGLHVSV------SPSVTP-LFTHDRVKAVQDAGVSMM 152
Query: 209 IA--------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDDPEIL 254
H P F + A L G+ +V K I++ P++L
Sbjct: 153 SMSLDGGSAATHDAFRGF--PGTFDR-TVEACHMLRAMGMKFQLNTVFTAKNIHEAPQML 209
Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
N ++L +Y
Sbjct: 210 KNA----IDLGAFMFYTFMLVPTG 229
>gi|293373984|ref|ZP_06620325.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
gi|292631060|gb|EFF49697.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
Length = 436
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ + ++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300
>gi|284161609|ref|YP_003400232.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
gi|284011606|gb|ADB57559.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
Length = 337
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD 153
+++L + +C C +C E + + ++ + I+E + + + TGG+
Sbjct: 30 KMVLFVTGICNNSCFYCPISEERRGKDVVFANEREVKRIEDAIEEANAMSAEGIAITGGE 89
Query: 154 PLILSHKRLQKVLKT------------------LRYIKHVQILRFHS 182
PL L R+ + LKT L +KH+ +RFH
Sbjct: 90 PL-LKLDRVVEFLKTFKDLHSHLYTAIPAKESVLSKLKHLDEIRFHP 135
>gi|242239858|ref|YP_002988039.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii
Ech703]
gi|242131915|gb|ACS86217.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii
Ech703]
Length = 340
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 24/181 (13%)
Query: 99 LKLLHVCPVYCRFCFRR-EMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + VC C +C GS LS + E +V TGG+P +
Sbjct: 29 LSITDVCNFRCTYCLPNGYQPNGSASSRFLSLDEIRRVSRAFAE-LGTEKVRLTGGEPSL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+++ +R H+ + R+ ++ + + + +++ +
Sbjct: 88 RRDFV--EIIAAIRENPA-----IHTLAVTTNGYRLARDVARWREAGLTSLNVSVDSLDA 140
Query: 217 YEFSE--------EAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+F + + I + G + +VL++ IND +L +R +
Sbjct: 141 RQFHAITGQDKFRQVMDGIDAAFDCGFSRVKVNTVLMRDINDS-----SLHTFLAWIRQR 195
Query: 268 P 268
P
Sbjct: 196 P 196
>gi|327402650|ref|YP_004343488.1| 30S ribosomal protein S12P methylthiotransferase [Fluviicola
taffensis DSM 16823]
gi|327318158|gb|AEA42650.1| SSU ribosomal protein S12P methylthiotransferase [Fluviicola
taffensis DSM 16823]
Length = 437
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVI 148
K+ C C FC R + V + +++S + AA Q +I ++
Sbjct: 143 AYFKIAEGCDRPCSFCAIPLMRGKHVSTPMDQLVASAKSLAA----QGVKEILLIAQDLT 198
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ G D I + L ++L L ++ ++ +R H P P + +++
Sbjct: 199 YYGLD--IYKKRNLAELLDQLAAVEGIEWIRLHYAFPAGFPMDVLDAMVK 246
>gi|299537543|ref|ZP_07050837.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1]
gi|298727104|gb|EFI67685.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1]
Length = 370
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L E L + E + + TGG+P ++S
Sbjct: 33 FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IELILKRLDEIPHLKTLSITGGEP-MMS 88
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
K +Q + L H + +R
Sbjct: 89 KKSVQNYVLPLLKYAHERGVR 109
>gi|160939106|ref|ZP_02086457.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
BAA-613]
gi|158438069|gb|EDP15829.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
BAA-613]
Length = 459
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
LK+ C C +C + G + L + + A A ++E + E G
Sbjct: 160 AFLKIAEGCDKRCTYCIIPYLRGPYRSVPIEQLVKEARQLAEAGVKELILVAQETTLYGR 219
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
D + K L ++L+ L I + +R P+ I ELI+ ++
Sbjct: 220 D--LYGEKCLPRLLRELAKIPGIYWIRIQ----YCYPEEITDELIETIR 262
>gi|124027074|ref|YP_001012394.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
gi|123977768|gb|ABM80049.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
Length = 264
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 104 VCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + CRFC+ G +G +LS + L + ++++ +V +GG+P + +
Sbjct: 50 GCNLRCRFCWAWRFTWTGYGRGVLLSPDEAAERLMRLARRTRVRQVRLSGGEP-TVGWEH 108
Query: 162 LQKVLKTL 169
L +V++ +
Sbjct: 109 LLEVMEAV 116
>gi|325660993|ref|ZP_08149620.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325472500|gb|EGC75711.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 440
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 97 ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
LK+ C +C +C FR V ++ + + E + + +Q E
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRS--VPMEQLVHEAQELAEQGVKELILVAQ--ETT 201
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + K L K+LK L I ++ +R V P+ I ELIQ +KE K
Sbjct: 202 LYGKD--LYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252
>gi|311993060|ref|YP_004009926.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
gi|284177898|gb|ADB81564.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
Length = 161
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R++L + C C C+ + + GT + + E + + I + TGGDPL
Sbjct: 18 RVVLFVTG-CLHKCEGCYNKSTWNPRNGTEFTGETIEEIRELLSKD-YIQGITLTGGDPL 75
Query: 156 ILSHKR--LQKVLKTLR-YIKH 174
R ++ +LK L H
Sbjct: 76 Y-PDNRETIEALLKCLHNSHPH 96
>gi|257065789|ref|YP_003152045.1| thiamine biosynthesis protein ThiH [Anaerococcus prevotii DSM
20548]
gi|256797669|gb|ACV28324.1| biotin and thiamin synthesis associated [Anaerococcus prevotii DSM
20548]
Length = 472
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +E+ + + K + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEEDLNAEIFNLAKELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ LS ++ + +Q+ + G DP+ + + + + T+ IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDLGHKRLALEAGEDPVNNPLEYILESIDTIYNIKH 167
>gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535317|gb|EEE38305.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
Length = 317
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
P+ + +C + C C+ + +++ + L IQE++ I E+ FTGG
Sbjct: 34 PETLWFNTGTLCNIECVNCYIASSPTNDALVYITTDEVRDYLDQIQERNWPIREIGFTGG 93
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209
+P ++ + + L V IL + P ++ L++ ++ + +
Sbjct: 94 EPF-MNPQMIDMTRAALERGYEVLIL-----TNAMLPMMRRKMREGLLELQRDYADKLTL 147
Query: 210 AIHANHPY-EFSEE---------AIAAISRLANAGIIL 237
I +H E +E + + L + G +
Sbjct: 148 RISVDHYRPELHDEERGKGSFAKTLTGMEWLRDNGFRM 185
>gi|94311377|ref|YP_584587.1| molybdenum cofactor biosynthesis protein A [Cupriavidus
metallidurans CH34]
gi|93355229|gb|ABF09318.1| molybdopterin biosynthesis protein A [Cupriavidus metallidurans
CH34]
Length = 395
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 19/130 (14%)
Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
+ D R +P + P + D PL + + + C C
Sbjct: 31 DLRDHRYRSMVPSIPSHLVAPNGL---VADTRGRPLHDLR--------ISVTDRCNFRCV 79
Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
+C +E+ +LS ++ E I + ++ TGG+PL+ K ++++
Sbjct: 80 YCMPKEVFDKDYTFLPHSELLSFEEIERTAR-IFVSQGVEKIRLTGGEPLL--RKNIERL 136
Query: 166 LKTLRYIKHV 175
++ L I+ V
Sbjct: 137 VEMLARIETV 146
>gi|282850512|ref|ZP_06259891.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
gi|282580005|gb|EFB85409.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
Length = 472
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
+G DPL L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160
>gi|149914119|ref|ZP_01902650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
gi|149811638|gb|EDM71471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
Length = 446
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 20/103 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIF---- 149
L + C +C FC V +S+ L +E + E+
Sbjct: 151 TAFLTVQEGCDKFCAFC-----VVPYTRGAEASRPAARILDEARELVDRGVREITLLGQN 205
Query: 150 ------TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
TG D S L +++ L I ++ +RF + P
Sbjct: 206 VNAYHGTGPDG---SDWSLARLIWALDAIDGLERIRFTTSHPN 245
>gi|153005880|ref|YP_001380205.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
sp. Fw109-5]
gi|152029453|gb|ABS27221.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
sp. Fw109-5]
Length = 495
Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 38/191 (19%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H + R+ + + C V C +C R+ G + LA E +
Sbjct: 49 AHHHFARMHVAVAPACNVQCHYCNRKYDCANESRPGVVSERLRPEDAVRKVLAVAAELPE 108
Query: 144 IWEVIFTG-GDPLI---------------LSHKRLQKVLKTLRYIKHVQILRF-HSRVPI 186
+ V G GD L RL L +H + L +R
Sbjct: 109 LSVVGIAGPGDALANADATFATLEGVHRAAPDLRLCVSTNGLALPEHAERLAAAGARHVT 168
Query: 187 V-----DP---QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
V DP +RI P +++ ++ P S + + I+ LA G+++
Sbjct: 169 VTVNMIDPAVGERIYPWVLRGGRKVRGPEA-------SRILSAQQLEGIAALAARGVLVK 221
Query: 239 SQSVLLKGIND 249
SV++ G+ND
Sbjct: 222 VNSVVIPGVND 232
>gi|317128167|ref|YP_004094449.1| coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
2522]
gi|315473115|gb|ADU29718.1| Coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
2522]
Length = 499
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 20/157 (12%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAY----- 137
+ + + H + + + CP C +C + G S ++ L Y
Sbjct: 163 AVVPDLDHIKNEVSIYIGIPFCPTMCAYCT---FPAYAINGKNGSVEEFLTGLHYEMEVT 219
Query: 138 ----IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
+ ++ + + GG P ++ + + + + + + + +R + V P I+
Sbjct: 220 GTWLKERNIKVTTIYYGGGTPTSITAREMDALYEKMYQVFPMADVRELT-VEAGRPDTIS 278
Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
PE I+ LK+ + + P F+ E + AI R
Sbjct: 279 PEKIEVLKKWNVDRISVN-----PQSFTNETLKAIGR 310
>gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
13280]
Length = 441
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPL 155
L + HVC + C +CF + + ++ K AA+ Y+ S +V+ F GG+P+
Sbjct: 92 LHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGEPM 151
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ ++ L H + RF + + +N I+ KE G + +++
Sbjct: 152 L--NEPLIWKTVDYAESAHPKR-RF-TYSITTNGTLLNDRAIEAFKEHGFSILVSL 203
>gi|115374433|ref|ZP_01461715.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
aurantiaca DW4/3-1]
gi|115368525|gb|EAU67478.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
aurantiaca DW4/3-1]
Length = 362
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C K +LS+ + E ++ I V TGG+PLI
Sbjct: 32 LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 88
Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
+ ++ + L + V+ + +
Sbjct: 89 D--ILEIAQRLSALPGVERVAITT 110
>gi|32472889|ref|NP_865883.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
SH 1]
gi|81661860|sp|Q7UT69|MOAA_RHOBA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|32444126|emb|CAD73568.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
SH 1]
Length = 359
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R D + + + C + C +C + VL+ ++ E + ++ + ++ T
Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDAEFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+PL+ +++ L I ++ L
Sbjct: 96 GGEPLVRRDCV--DLIRMLARIDGLEDL 121
>gi|291165575|gb|EFE27624.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
Length = 373
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
+ + CP C FC +R++ G + +S E L+ +E + F
Sbjct: 8 KKITIPIFVPHKGCPNDCVFCNQRKITGMTEEMTVSRAKATIEEFLSEKREDAFYEIAFF 67
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKE 202
G I +R++ L + H V+ +R +R P I+ +++ L++
Sbjct: 68 GGSFTAISDARRVE-----LLQLAHQYILSGEVKSVRISTR-----PDAIDEMILEELQQ 117
Query: 203 AGKPVY 208
G V
Sbjct: 118 YGVQVI 123
>gi|257063155|ref|YP_003142827.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
gi|256790808|gb|ACV21478.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
Length = 293
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 94 PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151
P LL++ C C+FC M + + +D EA LA ++ +
Sbjct: 14 PTWPLLEVTQGCTHNKCKFCT---MYKGVRFDLRPLEDIEADLAELRSTVPHARTIQLLS 70
Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQIL 178
+PL L + R + +L+ + Y+ ++ +
Sbjct: 71 ANPLALPYSRFKPILEKINEYLPDIEFV 98
>gi|239825986|ref|YP_002948610.1| YfkB-like domain protein [Geobacillus sp. WCH70]
gi|239806279|gb|ACS23344.1| YfkB-like domain protein [Geobacillus sp. WCH70]
Length = 374
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L + + ++E + + TGG+P +LS
Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIQRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
K + + L H + +R ++N L L K P +H +H
Sbjct: 91 LKSVNNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKIIPYLDVLHISH 139
>gi|149923413|ref|ZP_01911818.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Plesiocystis pacifica SIR-1]
gi|149815720|gb|EDM75246.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Plesiocystis pacifica SIR-1]
Length = 298
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 38/166 (22%)
Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----------- 144
+L+++ C C +C + KD A I E +
Sbjct: 17 LLIQVTLGCSHNRCVYC------DMYRDKRFRPKDWGQVEADIIEAGAMGRRPGRRGFRS 70
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQC 199
+V GD LIL +RL ++L +R + V+ R +R R + E +
Sbjct: 71 TKVFLCDGDALILPTRRLLQILAAIREHLPWVE--RVGSYGDTRSV----GRKSVEELTA 124
Query: 200 LKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
L+EAG + E E I +L AG+
Sbjct: 125 LREAGLGIVYHGMETGDAEVLERIDKGGTRPELIETADKLRAAGVQ 170
>gi|49184749|ref|YP_028001.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. Sterne]
gi|49178676|gb|AAT54052.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
Sterne]
Length = 378
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 65
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 66 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 116
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 117 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 176
Query: 261 F 261
Sbjct: 177 L 177
>gi|30261914|ref|NP_844291.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
Ames]
gi|47527167|ref|YP_018516.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|165869387|ref|ZP_02214046.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0488]
gi|167633400|ref|ZP_02391725.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0442]
gi|167638757|ref|ZP_02397032.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0193]
gi|170707334|ref|ZP_02897789.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0389]
gi|177650509|ref|ZP_02933476.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0174]
gi|190566409|ref|ZP_03019327.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
Tsiankovskii-I]
gi|227815307|ref|YP_002815316.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CDC 684]
gi|229600588|ref|YP_002866287.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0248]
gi|254684473|ref|ZP_05148333.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724000|ref|ZP_05185786.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A1055]
gi|254734776|ref|ZP_05192488.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Western North America USA6153]
gi|254741178|ref|ZP_05198866.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Kruger B]
gi|254755429|ref|ZP_05207463.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Vollum]
gi|254759966|ref|ZP_05211990.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Australia 94]
gi|30256540|gb|AAP25777.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
Ames]
gi|47502315|gb|AAT30991.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
'Ames Ancestor']
gi|164714827|gb|EDR20345.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0488]
gi|167513221|gb|EDR88592.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0193]
gi|167531438|gb|EDR94116.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0442]
gi|170127833|gb|EDS96705.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0389]
gi|172083653|gb|EDT68713.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0174]
gi|190562544|gb|EDV16511.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
Tsiankovskii-I]
gi|227007826|gb|ACP17569.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
CDC 684]
gi|229264996|gb|ACQ46633.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0248]
Length = 377
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|77408017|ref|ZP_00784766.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
gi|77173379|gb|EAO76499.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
Length = 315
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+++ L C C C + S L+ ++ EA + Y + + V TGG+ L+
Sbjct: 4 LVINLSQKCNAKCDHCCFSCLPNSVN--CLTDEEIEAVVRYAETHEDVELVSLTGGEALL 61
Query: 157 LSHKRLQKVLK 167
K L+ + +
Sbjct: 62 RKSKVLETIHR 72
>gi|222100278|ref|YP_002534846.1| Biotin synthetase [Thermotoga neapolitana DSM 4359]
gi|221572668|gb|ACM23480.1| Biotin synthetase [Thermotoga neapolitana DSM 4359]
Length = 307
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 13 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 72
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + +++ ++ +
Sbjct: 73 YMPD-VISDIVREIKKM 88
>gi|188588968|ref|YP_001921205.1| thiamine biosynthesis protein ThiH [Clostridium botulinum E3 str.
Alaska E43]
gi|188499249|gb|ACD52385.1| putative thiazole biosynthesis protein [Clostridium botulinum E3
str. Alaska E43]
Length = 472
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
E IL E D H K I + Y +RI+ L L + C C +C
Sbjct: 49 SHREAAILLECDLDEEIQKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165
>gi|170766823|ref|ZP_02901276.1| putative coproporphyrinogen III oxidase [Escherichia albertii
TW07627]
gi|170124261|gb|EDS93192.1| putative coproporphyrinogen III oxidase [Escherichia albertii
TW07627]
Length = 419
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS + L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSARDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|145588575|ref|YP_001155172.1| molybdenum cofactor biosynthesis protein A [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145046981|gb|ABP33608.1| GTP cyclohydrolase subunit MoaA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 371
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 94 PDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
R+L + + C C +C F + +LS ++ L I +
Sbjct: 35 RGRVLRDLRISVTDRCNFRCTYCMPKEVFDQNYPYLAHQELLSFEEITR-LTSIFSSLGV 93
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
++ TGG+PL+ K L+ +++ L I
Sbjct: 94 EKIRLTGGEPLL--RKNLEILIEMLAKI 119
>gi|154174577|ref|YP_001408011.1| aspartate kinase [Campylobacter curvus 525.92]
gi|112803284|gb|EAU00628.1| asparate kinase, monofunctional class [Campylobacter curvus 525.92]
Length = 399
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 23/166 (13%)
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
IFT D + + R++K K L + + ++L S V R ++ K+ +
Sbjct: 170 IFTDVDGVYTTDPRIEKRAKKLEKVSYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225
Query: 208 YIAIHANHPYEFSEEAIAA-ISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
NH E + + + +GI L +Q+ V L+G+ D P I A + +
Sbjct: 226 VTRSSFNH-NEGTLIVKEEDMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAKK 284
Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
I + D+ H F + E ++ +K+S
Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LELAKETMQKLS 323
>gi|332993820|gb|AEF03875.1| molybdenum cofactor biosynthesis protein A [Alteromonas sp. SN2]
Length = 322
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 21/178 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C++C G LS + L+ +V TGG+P L
Sbjct: 15 LSVTEACNFRCQYCLPDGYQGPSSEHFLSLGEINTLLSAFSG-LGTSKVRLTGGEP-TLR 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L +L ++ + + R+ + V ++I + P +
Sbjct: 73 RDFLD-ILSATANTPGIKRVAMTTHG-----GRMAEHAAAWKQAGLHQVNVSIDSLDPRQ 126
Query: 219 FSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
F+ + +A + AG+ + SVLL +D A L R L+ P
Sbjct: 127 FAAITGQDKLKQVLAGLDAAVEAGLDVKVNSVLLNDFSD-----ARLNRFLDWLKTMP 179
>gi|317179320|dbj|BAJ57108.1| hypothetical protein HPF30_1011 [Helicobacter pylori F30]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|317012127|gb|ADU82735.1| hypothetical protein HPLT_01465 [Helicobacter pylori Lithuania75]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|308061638|gb|ADO03526.1| hypothetical protein HPCU_01755 [Helicobacter pylori Cuz20]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|298736768|ref|YP_003729298.1| hypothetical protein HPB8_1277 [Helicobacter pylori B8]
gi|298355962|emb|CBI66834.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|254778988|ref|YP_003057093.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38]
gi|254000899|emb|CAX28835.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|224026389|ref|ZP_03644755.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
18228]
gi|224019625|gb|EEF77623.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
18228]
Length = 438
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 7/120 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + + +A A + +I GD
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVAQARQAAAEGGKEIVLTGVNIGD 207
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ + ++K L ++ ++ R S ++P + E+I+ + + H
Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERFRISS----IEPNLLTDEIIEYVAHSR---AFMPHF 260
>gi|217031506|ref|ZP_03437011.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128]
gi|216946706|gb|EEC25302.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128]
Length = 398
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 113 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 167
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 168 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 201
>gi|208434231|ref|YP_002265897.1| hypothetical protein HPG27_264 [Helicobacter pylori G27]
gi|208432160|gb|ACI27031.1| hypothetical protein HPG27_264 [Helicobacter pylori G27]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|108562712|ref|YP_627028.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1]
gi|107836485|gb|ABF84354.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|15644913|ref|NP_207083.1| hypothetical protein HP0285 [Helicobacter pylori 26695]
gi|2501536|sp|P56130|Y285_HELPY RecName: Full=Putative methylthiotransferase HP_0285
gi|2313381|gb|AAD07353.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 418
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|294792135|ref|ZP_06757283.1| putative ThiH protein [Veillonella sp. 6_1_27]
gi|294457365|gb|EFG25727.1| putative ThiH protein [Veillonella sp. 6_1_27]
Length = 482
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
+G DPL L+ +L++++ I
Sbjct: 150 ESGEDPLNNP---LEYILESIKTI 170
>gi|225874256|ref|YP_002755715.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225792393|gb|ACO32483.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 374
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
P + ++ CP+ CR C R E V L+ ++ L I + +I TG
Sbjct: 23 PMIVYWEMTQACPLACRHC-RAEAVTMPHPCELNYDESRDLLRQIAAFGDPKPH-LILTG 80
Query: 152 GDPL 155
GDPL
Sbjct: 81 GDPL 84
>gi|255102210|ref|ZP_05331187.1| radical SAM-family protein [Clostridium difficile QCD-63q42]
Length = 475
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 20/146 (13%)
Query: 92 RYP--DRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKS-- 142
+Y +R+ +L++ C ++C +C + +S + + + Y+ S
Sbjct: 79 KYHCENRVEGIILQVTQNCNLHCDYCTYSGGYINRIHTNKRMSKETAKRGIDYLISHSRD 138
Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQC 199
Q + F GG+PL L ++ ++ ++ + L++ + I E+I+
Sbjct: 139 CQYVSIGFYGGEPL-LEFDLIKWCIE--YSKANIEGKNLKY---NLTTNATLITEEIIEL 192
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIA 225
+E V I I + P E ++
Sbjct: 193 FEE--NNVSIMISLDGPAEIHDKNRK 216
>gi|149203904|ref|ZP_01880872.1| radical SAM domain protein [Roseovarius sp. TM1035]
gi|149142346|gb|EDM30391.1| radical SAM domain protein [Roseovarius sp. TM1035]
Length = 321
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTG 151
+P+ + +C + CR C+ + +S + L ++ + + E+ FTG
Sbjct: 37 HPETLWFNTGTLCNIECRNCYILSSPSNDALVYISESEVRDYLGQVRARGWPLREIAFTG 96
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
G+P ++ + + L V IL R + R L+ K G+ + + I
Sbjct: 97 GEPF-MNPEMIGMARAALEAGFEVLILTNAMRPMMRKTMR--AGLLDLGKTWGEKLTLRI 153
Query: 212 HANHPYE-FSEEAIAA---------ISRLANAGIIL 237
+H E +E A + L + GI +
Sbjct: 154 SVDHWSEALHDEERGAGAFAKTLEGMCWLRDNGIRM 189
>gi|148655095|ref|YP_001275300.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
gi|148567205|gb|ABQ89350.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
Length = 367
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 18/111 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VIFTGGDP 154
++ C + CR C M + E ++ ++++ + +I TGGDP
Sbjct: 27 WEMTQACALACRHCRAEAMPHPHPLQL----SFEESVRFLRQIPDFGDPMPQLILTGGDP 82
Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L ++ R + V I P P + ++ LK G
Sbjct: 83 LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRTMLAALKAHG 124
>gi|159042455|ref|YP_001541707.1| radical SAM domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157921290|gb|ABW02717.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
Length = 382
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 39/194 (20%)
Query: 93 YPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148
Y R LL CP+ CR C R + LS+ + + + + E + V+
Sbjct: 5 YSQRPLLVFWETTKACPLSCRHC-RANAILKPLPGELSTDEGKRLIEQLPEFGKPTPVLI 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206
TGGDPL+ + +++ + + VP+ ++ +L+ + E +
Sbjct: 64 LTGGDPLMRED--IFELIDYAKSLN----------VPVAVSPTVSEKLLSDNVIDELRRV 111
Query: 207 VYIA---------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
++ H N +E + + AIS L AG+ + + +K +
Sbjct: 112 SSVSVSLDGASPTTHEYIRNRNGVFELT---LKAISSLLKAGVKVQVNTTFMKL---NVH 165
Query: 253 ILANLMRTFVELRI 266
L +++ +L +
Sbjct: 166 ELPLIVKVLKDLGV 179
>gi|88856676|ref|ZP_01131332.1| MoaA-related protein [marine actinobacterium PHSC20C1]
gi|88814137|gb|EAR24003.1| MoaA-related protein [marine actinobacterium PHSC20C1]
Length = 336
Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
E + DP+ + L G R+ + C + C +C R +++
Sbjct: 56 TAHEATVRHGRAPDPLAGIDPDQLPG------TRLWMYTNFDCNLACDYCCVRSSPQTER 109
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ + + A ++ + E+I TGG+P +L
Sbjct: 110 RALGVDRVAQLAAEAVEA--GVKELILTGGEPFLLPD 144
>gi|325300681|ref|YP_004260598.1| Radical SAM domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324320234|gb|ADY38125.1| Radical SAM domain protein [Bacteroides salanitronis DSM 18170]
Length = 545
Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 74/246 (30%), Gaps = 46/246 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L+ C C FC G + L + ++ IQE I +
Sbjct: 179 VQLETTRGCFNTCAFCVSG---GEKPVRTLPIETIRRRISLIQEH-YIRNIRVLDR-TFN 233
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+ + + +L R +RFH V P ++ EL + L K +H
Sbjct: 234 YNTRHARALLDLFREFP---DIRFHLE---VHPALLSEELKEILAAMPKG---QLH---- 280
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
AGI L Q VL ++ LA+ + L P H DL
Sbjct: 281 --------------LEAGIQSLHQEVLT--VSRRAGDLADALSGLEFLCALPNLETHADL 324
Query: 277 AAGTSHFRL--------TIE--EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
AG + L T+ +I + + G +L Y +
Sbjct: 325 IAGLPLYHLKEIFDDVRTLASYRAGEIQLESLKLLPGTEMRRRSPELSISYS--PFPPYE 382
Query: 327 IKKVGN 332
+ K
Sbjct: 383 VLKTNE 388
>gi|323496777|ref|ZP_08101822.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
gi|323318202|gb|EGA71168.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
Length = 457
Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 23/133 (17%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD-------RILLKLLHVCP 106
DP+ R PQK+ + PI ++ + Y R L + C
Sbjct: 18 DPL-RYAFPQKK--SAHAGGMASPIP--PDQKVEILSRLYDQQGQKSAKRCLYIHIPFCR 72
Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--------IWEVIFTGGDPLILS 158
V C FC + L EA + I +K+ V GG P LS
Sbjct: 73 VRCTFC---NFFQNAASRKLVDDYFEALMIEIAQKAAQPWTQTGLFHAVYIGGGTPTDLS 129
Query: 159 HKRLQKVLKTLRY 171
++++++ K +R
Sbjct: 130 AEQVERLGKAIRR 142
>gi|313125740|ref|YP_004036010.1| miab-like tRNA modifying enzyme [Halogeometricum borinquense DSM
11551]
gi|312292105|gb|ADQ66565.1| MiaB-like tRNA modifying enzyme [Halogeometricum borinquense DSM
11551]
Length = 417
Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 9/113 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + + + ++ E A A + + E+ TG D +
Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPPVEENVEKARALV--HAGAKEIRITGQDTGVY 182
Query: 158 ----SHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++L ++L + I+ +R P I+ EL++ K
Sbjct: 183 GWDKGDRKLPELLDRICSEIEGDFRVRLGMANPGGI-HGIHEELVEVFDRHDK 234
>gi|329942551|ref|ZP_08291361.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
gi|332287182|ref|YP_004422083.1| radical SAM domain protein [Chlamydophila psittaci 6BC]
gi|313847779|emb|CBY16769.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506991|gb|ADZ18629.1| radical SAM domain protein [Chlamydophila psittaci 6BC]
gi|328815461|gb|EGF85449.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
gi|328914429|gb|AEB55262.1| conserved hypothetical protein TIGR00423 [Chlamydophila psittaci
6BC]
Length = 370
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 9/89 (10%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y L + C C FC G KG + + ++ I E GG
Sbjct: 66 YSSTFYLYPTNFCEFNCTFCAFYAKPGDAKGWFHTPDQLIEKIRELEV--PITETHIVGG 123
Query: 153 DPLILSHKRLQKVLKTLRYI----KHVQI 177
L + I H+ I
Sbjct: 124 ---CFPDCNLDYYTELFSKIKTNFPHIHI 149
>gi|293609283|ref|ZP_06691585.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
gi|292827735|gb|EFF86098.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
Length = 346
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + +++ ++ I + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALIQFCSFMVQQ-GIESIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + Q LK+AG + I++ + P
Sbjct: 86 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I +AG+ VL+K NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181
>gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
Length = 461
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
H P R+ + ++ C YC +C V S+ + L I
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192
Query: 144 IWEVIFTGGD----------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQ 190
+ EV G + L L + +++ + I ++ +R+ + P+
Sbjct: 193 VREVTLLGQNVNAYRGKFGGALTLGSTEIADFATLIEYVADIPGIERIRYTTSH----PK 248
Query: 191 RINPELIQCLKEAGKPVYIAIH 212
LI + K + +H
Sbjct: 249 EFTQRLIDTYAKVPK-LVSHLH 269
>gi|226314357|ref|YP_002774253.1| hypothetical protein BBR47_47720 [Brevibacillus brevis NBRC 100599]
gi|226097307|dbj|BAH45749.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 367
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
+ +VC +C+FC R G + +S ++ L Y++ I E GG
Sbjct: 67 INPTNVCEAHCKFCGFRRDEGDEGAYTMSMEEL---LHYVETRFHPGIREFHIVGG---H 120
Query: 157 LSHKRLQKVLKTLR 170
HK + L TLR
Sbjct: 121 NQHKPFEYYLDTLR 134
>gi|205372586|ref|ZP_03225397.1| hypothetical protein Bcoam_03785 [Bacillus coahuilensis m4-4]
Length = 375
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L E L+ + E + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLTPKDPNALP---IELLLSRLDEIQDLRSLSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179
LS K +++ + L H + +R
Sbjct: 90 LSKKSVEQYVLPLLQYSHSRGVR 112
>gi|77920081|ref|YP_357896.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
gi|77546164|gb|ABA89726.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
Length = 609
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 77 PIGDNNHSPLKGIV-----HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
P+ D P + RYP +L +L CP C FCF GS K +
Sbjct: 166 PVTDLATLPSPFLTGLLPPERYPG-LLWELSRGCPFRCDFCFESR--GSDKVRRFPPERL 222
Query: 132 EAALAYIQEKSQIWEVIFTGGDP-LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
A L + + ++ DP + +++L+ + + R +
Sbjct: 223 RAELESFAA-AGVRQLFV--LDPTFNYHQPQAKQMLRMMAELAPEIHYTIEVRA-----E 274
Query: 191 RINPELIQCLKEAGKPVYIAIHANHP-------YEFSEE-AIAAISRLANAGII 236
I+ E+ + + I + + P +F E I L AG+I
Sbjct: 275 FIDEEMAGLFADINCALQIGLQSADPAVLARVHRQFDAEDFTERILLLHEAGVI 328
>gi|229090888|ref|ZP_04222116.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42]
gi|228692497|gb|EEL46228.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42]
Length = 383
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181
Query: 261 F 261
Sbjct: 182 L 182
>gi|282882002|ref|ZP_06290643.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
315-B]
gi|281298032|gb|EFA90487.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
315-B]
Length = 467
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
G Y + + +++ C +C FC + S++ + + I+
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222
Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
E+ G + + + ++L + IK V+ +RF + P+ I+ ELI
Sbjct: 223 EITLLGQNVNSYGRGLENKTSFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278
Query: 201 KEAGK 205
++
Sbjct: 279 RDLDH 283
>gi|119872753|ref|YP_930760.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
4184]
gi|119674161|gb|ABL88417.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
Length = 298
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 38/181 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLI- 156
+ C C +C+ + + E +++ + V + DP
Sbjct: 27 VNPYTGCGHGCLYCYITSYISNAFNPRPKEDLVEKIRRDLEKIPRGSIVALSNSSDPYTP 86
Query: 157 ------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
L+ K LQ +L+ +++ ++ P+V + V +
Sbjct: 87 PEATLGLTRKVLQILLERGY-----KVI-ITTKSPLVL------RDLDIFTRNRGRVVVQ 134
Query: 211 IHANHPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILA 255
I E A + A+ RLA+ GI + SV L+ INDD + +
Sbjct: 135 ITITTLREDLAAVLEPRAPRPAGRLEAVRRLASVGIPV---SVRLDPLIPYINDDIDNIE 191
Query: 256 N 256
Sbjct: 192 E 192
>gi|147678122|ref|YP_001212337.1| Fe-S-cluster redox protein [Pelotomaculum thermopropionicum SI]
gi|205829798|sp|A5D1B6|RLMN_PELTS RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|146274219|dbj|BAF59968.1| predicted Fe-S-cluster redox enzyme [Pelotomaculum
thermopropionicum SI]
Length = 368
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 35/193 (18%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVI 148
H Y + + + C + CRFC +G + + + L I+ +I V+
Sbjct: 114 HAYGNSVCVSTQAGCRMGCRFCASA--LGGLTRNLSPGEIYDQVLG-IRRDTGERISSVV 170
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLK---- 201
L+ S + L TL +IK+V L R V L+ ++
Sbjct: 171 ------LMGSGEPLDNYDATLTFIKNVTAPYGLHIGCRHITVS----TCGLVPGIRRLAR 220
Query: 202 -EAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ + +++H N Y +E A G + + LL G+N
Sbjct: 221 EKLALTLAVSLHAPNDRLRDILVPVNRKYPLTELMAACRDYAQETGRRVTFEYALLAGVN 280
Query: 249 DDPEILANLMRTF 261
D E L+R
Sbjct: 281 DRKEHAEELVRLL 293
>gi|18312397|ref|NP_559064.1| hypothetical protein PAE1082 [Pyrobaculum aerophilum str. IM2]
gi|18159850|gb|AAL63246.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 295
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 22/184 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
L C C +C+ + + +++ + V + DP
Sbjct: 27 LNPYTGCGHGCLYCYITSYIPDAFNPRPKEDLLDKVRRDLEKIPKGAVVSLSNSSDPYTP 86
Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
RL + + + + + + ++ P+V + + V + I
Sbjct: 87 PEARLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDIFQRHRGRVAVQITITT 139
Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVE 263
E A + A+ RL+ AG+ + + L+ +NDD + + ++ E
Sbjct: 140 LREELASVLEPGAPRPAGRLDAVRRLSEAGVPVAVRLDPLIPLLNDDVDNIEEVVSKAAE 199
Query: 264 LRIK 267
K
Sbjct: 200 AGAK 203
>gi|262279390|ref|ZP_06057175.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259741|gb|EEY78474.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus
RUH2202]
Length = 346
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +L + ++ + + + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLGFEALFQFCHFMVQH-GVESIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI----AI 211
+ + ++ L+ +K + + R + + + LK+AG + + AI
Sbjct: 86 RQGIVHFVRELQALKALGLKRIS----MTTNGHYLAKYARQLKDAGLDDLNISLDSLDAI 141
Query: 212 HANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I + G+ VL+K NDD
Sbjct: 142 QF---KELTKKKLEPVLEGIQAAKDVGLPFKINCVLMKNKNDD 181
>gi|315497432|ref|YP_004086236.1| molybdenum cofactor biosynthesis protein a [Asticcacaulis
excentricus CB 48]
gi|315415444|gb|ADU12085.1| molybdenum cofactor biosynthesis protein A [Asticcacaulis
excentricus CB 48]
Length = 337
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 87 KGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
++ Y R + + + C + C +C + +LS ++ E L+
Sbjct: 5 PALIDAYHRRISYVRISVTDRCDLRCTYCMSERQTFLPRENLLSFEELER-LSLFLIDQG 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + TGG+PL+ + + LK L H L
Sbjct: 64 VTRLRITGGEPLV--RRGILDFLKRLGAQVHEGRL 96
>gi|229824989|ref|ZP_04451058.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
49176]
gi|229790992|gb|EEP27106.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
49176]
Length = 435
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIF 149
DRI + L + C + C++C+ ++ +K +L+ + + Y+ + + V F
Sbjct: 90 DRIEIMLTNTCNLSCKYCYAKDGTYGRKPRILNENEI---IKYLNALFPIKYNYVNTVFF 146
Query: 150 TGGDPLI 156
GG+PL+
Sbjct: 147 FGGEPLL 153
>gi|229495505|ref|ZP_04389238.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas endodontalis ATCC 35406]
gi|229317488|gb|EEN83388.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas endodontalis ATCC 35406]
Length = 166
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 87 KGIVH---RYPDRILLKLL-------HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
KG++H RY + I C +C C E G LS + +
Sbjct: 10 KGMLHLLNRYKETISDGPGLRYAIYLAGCSHHCPGCHNPESHNPLGGIELSEEVLRGIID 69
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
I + + +GGDP + L+ +++ L
Sbjct: 70 EINSNPLLDGITLSGGDPFFYPEELLK-LVQRLSQ 103
>gi|209966936|ref|YP_002299851.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum
SW]
gi|209960402|gb|ACJ01039.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum
SW]
Length = 492
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 54/199 (27%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ + + C + C +C R+ G + + LA Q
Sbjct: 60 AHHYFARMHVAVAPACNIQCNYCNRKFDCANESRPGVVSERLTPEEGARKVLAVAASVPQ 119
Query: 144 IWEVIFTG-GDP----------------------LILSHKRLQ--KVLKTL--RYIKHVQ 176
+ + G GD L LS L +++ + I HV
Sbjct: 120 LSVLGIAGPGDACYDWARTRATFALVARRLPDIRLCLSTNGLALPELVDEIVDMNIDHV- 178
Query: 177 ILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHAN---HPYEFSEEAIAAISRL 230
+ + +VDP +RI P + G + A+ H + + RL
Sbjct: 179 TVTIN----MVDPEVGERIYPWIY-----HGHRRWTGRDASRLLHERQM-----EGLERL 224
Query: 231 ANAGIILLSQSVLLKGIND 249
G+++ SV++ GIND
Sbjct: 225 TARGVLVKVNSVMIPGIND 243
>gi|187932645|ref|YP_001887172.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B]
gi|187720798|gb|ACD22019.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B]
Length = 451
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+D D HS + Y + L ++H C + C++CF E V+S +
Sbjct: 75 YSKDQYEDIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSLDVAK 132
Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
A+ Y+ ++S E+ GG+P + ++ ++K R
Sbjct: 133 KAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173
>gi|170289332|ref|YP_001739570.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
gi|170176835|gb|ACB09887.1| Radical SAM domain protein [Thermotoga sp. RQ2]
Length = 348
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 113
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + +++ ++ +
Sbjct: 114 YMPD-VISDIVREIKKM 129
>gi|157804180|ref|YP_001492729.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
gi|229890632|sp|A8F011|MIAB_RICCK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157785443|gb|ABV73944.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
Length = 446
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 26/137 (18%)
Query: 76 DPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC---------FRR--EMVGSQK 122
D + + L YP + + C +C FC F R E V +
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASAFISVQEGCDKFCTFCVVPYTRGVEFSRNVEQVYREA 190
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+S+ E L + + + G D I S L +++ L I +++ LR+ +
Sbjct: 191 LKVVSNGAREIML--LGQN--VNAYHGKGVDDKIFS---LADLIRYLAQIPNLERLRYTT 243
Query: 183 RVPIVDPQRINPELIQC 199
PI + +LI+
Sbjct: 244 SHPID----MTDDLIKL 256
>gi|189346924|ref|YP_001943453.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245]
gi|254807162|sp|B3ED49|RLMN_CHLL2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|189341071|gb|ACD90474.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245]
Length = 361
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 65/191 (34%), Gaps = 40/191 (20%)
Query: 96 RILLKLLHVCPVYCRFC------FRREMV-GSQKGTVLSSKDTEAALAYIQEK--SQIWE 146
+ C ++C FC FRR + G V ++ E I
Sbjct: 110 TACISSQAGCSLHCSFCATGKTGFRRNLTSGEMTDQVF------LLNDHLAEHYGQTITN 163
Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCL 200
++F G G+PL+ L + +TL + + + I PQ +L+ L
Sbjct: 164 IVFMGMGEPLLNMTHVLDAI-ETLSNHNYRYSLSQRKISISTAGII--PQ---IDLLARL 217
Query: 201 KEAGKPVYIAIH--ANHPYE-FSEEAIA----AISRLANAGIILLSQSV-----LLKGIN 248
+ +++H E A A+ + L Q V LL+ IN
Sbjct: 218 -PHKVKLAVSLHSAIQTNRESIMPAAREYPLPALKKSLAEYNRLSGQPVTLVYMLLRDIN 276
Query: 249 DDPEILANLMR 259
D PE L++
Sbjct: 277 DSPEDAKALVK 287
>gi|325294473|ref|YP_004280987.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064921|gb|ADY72928.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 384
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 30/201 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I ++ C + C C R + S +D + + I + S+ ++ TGG+
Sbjct: 9 PKWIAWEITRRCNLNCIHC-RSSSTMESEQGDFSFEDGKKLMDDIAKISKPT-IVLTGGE 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
PL L++ + L + R + +V + E+ + +K G K V ++
Sbjct: 67 PL------LREDVWDLAAYGTEKGFRMCIATNGVLV-----DDEVCKEMKRVGIKMVSLS 115
Query: 211 IHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ + E ++ A I L S K + + N+ +
Sbjct: 116 LDGSTA-EIHDDFRKQPGAYEGVMKAAELFKKHDIPFLINSSFTK---RNAFDIPNVYKK 171
Query: 261 FVELRIKPYYLHHPDLAAGTS 281
E+ + +Y+
Sbjct: 172 AREIGARAWYMFLVLPVGRAE 192
>gi|320191451|gb|EFW66101.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
EC1212]
gi|326340026|gb|EGD63833.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
Length = 419
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|269925522|ref|YP_003322145.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789182|gb|ACZ41323.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC
BAA-798]
Length = 487
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 15/92 (16%)
Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSV 242
+ P + L+E P+Y+++H P + + + ++RL GI + +Q V
Sbjct: 130 LTPSDWRRLEEQRLSPLYVSVHTTDPDLRRRLLGYPKAPDILEQLARLREIGIQVHTQLV 189
Query: 243 LLKGINDDP------EILANLMRTFVELRIKP 268
L G+ND P + LA L T + + + P
Sbjct: 190 LCPGLNDGPQLERTIDDLAALYPTVLSIAVVP 221
>gi|160889557|ref|ZP_02070560.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492]
gi|156861074|gb|EDO54505.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492]
Length = 432
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242
>gi|328955533|ref|YP_004372866.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
glomerans PW2]
gi|328455857|gb|AEB07051.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
glomerans PW2]
Length = 365
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 30/211 (14%)
Query: 91 HRYPDRI----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
RY D++ L+++ + C C +C R + L D A E
Sbjct: 64 QRYGDKVFIRGLIEISNRCRNDCLYCGIRRSNECAERYRLQPADIIACTDKGYELGFRTF 123
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEA 203
V+ G DP + + L +++ ++ H L R + + + L
Sbjct: 124 VMQGGEDPFF-TDEVLCPLIERIKA-NHPDCAITLSLGERTRESYQRLFDAGADRYL--L 179
Query: 204 GKPVYIAIHAN--HPYEFSEEAIAAI-SRLAN------AGIILLS--QSVLLKGINDDPE 252
H HP E S A S L AG ++ S Q+V + + DD
Sbjct: 180 RHETATDAHYRRLHPSELSLATRKACLSNLKEIGYQTGAGFMVGSPYQTV--ENLADDML 237
Query: 253 ILANLMRTFVELR-IKPYYLHHPDLAAGTSH 282
L L V + P+ H
Sbjct: 238 YLDELQPQMVGIGPFIPH-----RDTPFRDH 263
>gi|317480049|ref|ZP_07939161.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36]
gi|316903791|gb|EFV25633.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36]
Length = 432
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242
>gi|310657443|ref|YP_003935164.1| radical sam domain-containing protein [Clostridium sticklandii DSM
519]
gi|308824221|emb|CBH20259.1| Radical SAM domain protein [Clostridium sticklandii]
Length = 288
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 22/119 (18%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151
+++++ C C FC K ++ E ++ ++ V
Sbjct: 17 LIVQVTIGCAHNRCTFC------SMYKDKQFRIRELEEVFEDLKSARAVYPKVKRVFLAD 70
Query: 152 GDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGK 205
GD L+L +L +L + + + +I + + PQ R + E + LKE G
Sbjct: 71 GDALVLPTDKLIAILDKINELFPERERISAYAT------PQDIMRKSSEDLALLKEKGL 123
>gi|307293142|ref|ZP_07572988.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
L-1]
gi|306881208|gb|EFN12424.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
L-1]
Length = 449
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 14/110 (12%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
L G + L ++ C +C +C V S+ A L +
Sbjct: 143 LPGRTKQARPTAFLTIMEGCDKFCTYC-----VVPYTRGAEISRGWNAILDEAKALVDGG 197
Query: 144 IWEVIFTGG--DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPI 186
+ E+ G + + + +++ L I ++ +R+ + P
Sbjct: 198 VREITLLGQNVNAWTGEDDKGRTQGMDGLVRELAKIDALKRIRYTTSHPN 247
>gi|291522320|emb|CBK80613.1| GTP cyclohydrolase subunit MoaA [Coprococcus catus GD/7]
Length = 322
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153
L + C + CR+C + L ++ L I I +V TGG+
Sbjct: 14 LSVTDRCNLRCRYCM-----PPDGISCLPMREILTYEEIEHLCRIFAALGIHKVKITGGE 68
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
P + K + +++ ++ I + + +
Sbjct: 69 PFV--RKNICHLIRRIKQIPGIDSVTLTT 95
>gi|158313057|ref|YP_001505565.1| RNA modification protein [Frankia sp. EAN1pec]
gi|158108462|gb|ABW10659.1| RNA modification enzyme, MiaB family [Frankia sp. EAN1pec]
Length = 595
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 16/139 (11%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ LKL C C FC FR V + VL+ + A + G
Sbjct: 243 VPLKLSSGCDRRCAFCAIPSFRGSHVSRRPEEVLAEAEWLAGQGARELVLVSENSTSYGK 302
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
D L + L+K+L L + + +R + P + P L++ L G Y+
Sbjct: 303 D---LGDLRALEKLLPLLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 355
Query: 211 IHANHPYEFSEEAIAAISR 229
+ H S + + R
Sbjct: 356 LSFQHA---SPAVLRRMRR 371
>gi|325962827|ref|YP_004240733.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468914|gb|ADX72599.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
Sphe3]
Length = 369
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 32/181 (17%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
G+ RY R L L C + C +C E + K V+S+++ + E+
Sbjct: 26 GLADRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVEQLG 85
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ E+ TGG+PL+ L ++ LR R H +PI + + K A
Sbjct: 86 VRELRLTGGEPLVRHD--LVDIIAALR--------RNHPALPISM---TSNGVGLAKKAA 132
Query: 204 GKPVYIAIHAN------HPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGIN 248
N H F++ AG+ + +VL++GIN
Sbjct: 133 ALKAAGLTRINVSLDSLHEETFTQLTRRPFLDQVLAGVDAAWAAGLGPVKLNAVLMRGIN 192
Query: 249 D 249
D
Sbjct: 193 D 193
>gi|320011639|gb|ADW06489.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 742
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 17/100 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAY----IQEKSQIW-----E 146
I+LK+ C + C C+ E + + K + A+++ + E +
Sbjct: 11 IVLKVHSRCDLACDHCYIYEH--ADQSWRTRPKTISDEAISWTARRLAEHASAHALDSMS 68
Query: 147 VIFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHS 182
VI GG+PL+ RL +++ L I + LR H+
Sbjct: 69 VILHGGEPLLAGPARLRRVCEELTAALNGIAELD-LRIHT 107
>gi|288930027|ref|ZP_06423868.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
str. F0108]
gi|288328686|gb|EFC67276.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
str. F0108]
Length = 456
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 37/204 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + CP +C FC++ + G + +AAL I ++ D L+ S
Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKFFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213
+ ++ + ++ + V F S + Q I +LI+ EAG + V+I
Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276
Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266
N + AA+ RL + GI++ V L DD ++ R V+ +
Sbjct: 277 ENLKASNKCQNLQRDYSAAVQRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330
Query: 267 KP------YYLHHPDLAAGTSHFR 284
Y H GT F+
Sbjct: 331 DNAITTATY--HILTPYPGTRQFQ 352
>gi|284036269|ref|YP_003386199.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
gi|283815562|gb|ADB37400.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
Length = 449
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C +C G + ++ + A I E+ + E++ TG
Sbjct: 150 RTRTFLKVQDGCDYPCAYCTIPLARGKSRSDTIA--NVVKAAREIAER-GVKEIVLTGVN 206
Query: 152 -GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD +++ + +++ L + ++ R S ++P + E+I + ++ +
Sbjct: 207 IGDFGLINGQRTETFFDLVQALDEVDGIERFRISS----IEPNLLTDEIIAFVAQSKR-- 260
Query: 208 YIAIHA 213
H
Sbjct: 261 -FVPHF 265
>gi|190570899|ref|YP_001975257.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019415|ref|ZP_03335221.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357171|emb|CAQ54586.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994837|gb|EEB55479.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 408
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 29/159 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +++ + C C FC E G+ + +++ E +I+ EV+FTG D
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPVNNI-IEQIKIFIEN--GYQEVVFTGVD 179
Query: 154 PL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ + L +++ L+ I ++ LR S + + + ++ EL+ + + +
Sbjct: 180 ITDFGTDLFGKQSLGSMVRRVLKDIPQLKRLRL-SSIDVAE---VDDELMDLIANESR-L 234
Query: 208 YIAIHAN---------------HPYEFSEEAIAAISRLA 231
+H + H E E + L
Sbjct: 235 MPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273
>gi|170686175|ref|ZP_02877397.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0465]
gi|170669872|gb|EDT20613.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
A0465]
Length = 377
Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|325002626|ref|ZP_08123738.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudonocardia
sp. P1]
Length = 360
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 87/244 (35%), Gaps = 38/244 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP+ C +C + LS+ D + A + + +GG+PL+
Sbjct: 9 LLAELTYRCPLACAYCSNPIELARYDDE-LSTADWQRVFAE-AADLGVLQCHLSGGEPLL 66
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
L ++++T + + L + ++ + L+ AG V +++ A+
Sbjct: 67 RRD--LTELVRTAQSLGMYTNL-------VTSAIGLSRPRAEALRAAGLDHVQVSVQADE 117
Query: 216 PYEFSEEA--------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
P A I A + G L VL + D + L+ R++
Sbjct: 118 PATSDRIAGVRSFERKIEACRLVRELGWPLTVNVVLHRQNIDRIGEIITLVEELQADRVE 177
Query: 268 ----PYY------LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
YY + ++ ++IV + + +++G + LP Y
Sbjct: 178 LANTQYYGWAWKNRSSLLPSREQ------LDRAEEIVTAARSRLAGRM--EIVHVLPDYY 229
Query: 318 GKVK 321
+
Sbjct: 230 SRYP 233
>gi|309792044|ref|ZP_07686520.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
DG6]
gi|308225937|gb|EFO79689.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
DG6]
Length = 439
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 38/202 (18%)
Query: 59 QFIPQKEELNILPEEREDPIGDN-----NHSPLKGIVHRYPDR-ILLKLLHVCPVYCRFC 112
Q + E+ P + P+ + I P LK+ C + C FC
Sbjct: 100 QAWTRINEVIAPPASQPIPLLETPAPAYADWRSTPIQRLQPSHSAYLKISDGCNLRCAFC 159
Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT-------GGDPLILSHKRLQ 163
++SK A L +++ + E++ G D L L L
Sbjct: 160 TI-----PSIKGDMASKPIRAVLGEVEQLVGQGVQEIVLVAQHLTDYGRD-LGLQDG-LA 212
Query: 164 KVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHANHPYEF 219
+L+ + I H +R P I+ LI+ + E + + + + HP
Sbjct: 213 TLLEEMCQIVPHSGWIRL----MYAYPHGISERLIRVMAEHPQVLAYLDMPLQHAHPDTL 268
Query: 220 --------SEEAIAAISRLANA 233
+E A I +L A
Sbjct: 269 RRMRRPPDTEHTRAVIQQLRAA 290
>gi|302386178|ref|YP_003822000.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
gi|302196806|gb|ADL04377.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
Length = 337
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C+ C++ G++K L++++ + + I + +IF+GG+PL+
Sbjct: 3 VSWMTTNQCNLKCKHCYQDA--GNKKTDELTTEEAKRLIDEIAR-AGFRIMIFSGGEPLM 59
Query: 157 LSH 159
Sbjct: 60 RPD 62
>gi|270296681|ref|ZP_06202880.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20]
gi|270272668|gb|EFA18531.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20]
Length = 432
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242
>gi|257456539|ref|ZP_05621735.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
gi|257446199|gb|EEV21246.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
Length = 498
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 39/222 (17%)
Query: 17 ANLIKKEQIDEIKEISNHYS-------IALTPVIANLINPHNPND-----PIARQFIP-- 62
++ +I+ + + A+ A L+ D R ++
Sbjct: 107 YAQLEAAEIEALHPHVLAFPGQQKDLLTAIPAYFAELVRGSAYFDTAFFLSALRTYLSGL 166
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-----------YPDRILLKLLHVCPVYCRF 111
P + P+GD + GI + + R LLK+ C C +
Sbjct: 167 TGRIPQDEPRHHK-PVGDQSG---HGIQRKPLFALSSPHFLFHSRALLKIQDGCNDACAY 222
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
C R + + ++ +++ E E++ + EV TG + L L+
Sbjct: 223 C-RIRLARGKSVSLPAAEVLERLR--CIEETGVPEVTLTGVN-LSQYRSEAGDFAGILKL 278
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
I +R R+ + P RI+ L+ L I H
Sbjct: 279 ILENSTIRV--RISSLYPDRIDEALVPLLAHPR----ICPHF 314
>gi|77920251|ref|YP_358066.1| Fe-S oxidoreductase coenzyme synthesis protein [Pelobacter
carbinolicus DSM 2380]
gi|77546334|gb|ABA89896.1| Fe-S oxidoreductase, putative coenzyme synthesis protein
[Pelobacter carbinolicus DSM 2380]
Length = 344
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 76/223 (34%), Gaps = 54/223 (24%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDPLILS 158
C + C +C + GT L+ + + A L V+ GG+PL+
Sbjct: 33 RQCDLRCLYC------YADSGTALADELALSEIYAVLEQAMALGIRRVVVLGGGEPLMYP 86
Query: 159 HKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ ++++ L H + + + +I EL Q G V + N
Sbjct: 87 --HVVEIMQYLAQ--HGIGIDLFTNGT--------QITAELAQEFVRLG--VAPVVKMNS 132
Query: 216 PYEFSEEA-----------IAAISRLANAG-----IILLSQSVLLKGINDDPEILANLMR 259
+ ++ + L AG + L +Q+V+ + + + L ++ R
Sbjct: 133 RRQQVQDFLAGRQGAYADIRRGLELLMQAGYPAEGLPLGAQTVVCRQ---NIDELPDMWR 189
Query: 260 TFVELRIKPYYLHHPDLA---AGTSH--FRLTIEEGQKIVASL 297
+ I PY + H +++ E Q + +L
Sbjct: 190 WLRDRHIIPY---VELMTWQGRARRHPELEVSVAEMQGLFETL 229
>gi|315223707|ref|ZP_07865557.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
gi|314946282|gb|EFS98281.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
Length = 437
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
R LK+ C C +C + S E +A + I E++ TG
Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENIIANAKKISDKGIKEIVLTG 194
Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
GD ++++ L ++ ++ LR S ++P I E I + +
Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVQALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250
Query: 203 AGKPVYIAIHA 213
+ H
Sbjct: 251 SN---SFVPHF 258
>gi|146329852|ref|YP_001210121.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
VCS1703A]
gi|229890515|sp|A5EXA7|MIAB_DICNV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|146233322|gb|ABQ14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
VCS1703A]
Length = 456
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 15/124 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC +C G++ D A A + + + E+ G +
Sbjct: 151 TAYVSVMEGCSKYCTYCVVPYTRGAEISRPF--DDVLAECATLAAQ-GVREINLLGQNVN 207
Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ L +++ + I ++ +RF + P + LI+ + K +
Sbjct: 208 AYRGAMHDGTIADLALLIEYVAAIPNIGRIRFTTSH----PSEFSDALIETYRRVPK-LV 262
Query: 209 IAIH 212
+H
Sbjct: 263 SHLH 266
>gi|296109434|ref|YP_003616383.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
gi|295434248|gb|ADG13419.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
Length = 372
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGG 152
++++L + C C +C E + + + + I+E V TGG
Sbjct: 28 EKLVLFITGTCKNNCYYCPLSEKRKDKDVIYANERLISSVEEAIEEAKLCSSRGVGITGG 87
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+PL L R +K L+ L+ + FH+ P+ I E ++ +KE + + IH
Sbjct: 88 NPL-LRVDRTKKYLEALKK----EFKDFHA-HLYTTPETITTENLEKIKELDE---LRIH 138
Query: 213 ----AN--HPYEFSEEAIAAISRLAN 232
N + EF +E I I
Sbjct: 139 PTKIFNIGYKEEFVDELIKKIRLAKK 164
>gi|256828055|ref|YP_003156783.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
baculatum DSM 4028]
gi|256577231|gb|ACU88367.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
baculatum DSM 4028]
Length = 330
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + E +LS ++ + + +++ + +V TGG+P
Sbjct: 15 LSITDRCNLRCLYCRPQSEWTFMPHEQILSFEEMAELVD-VAKEAGVEKVRLTGGEPFAR 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
L LR + + R++ L+EAG + I +
Sbjct: 74 KDFI--PFTGRLHAKYPDLDLRITTNG-TLLSGRVDE-----LREAGVS-CLNISLDTLQ 124
Query: 218 -----EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + ++ A I G+ + V LKGINDD
Sbjct: 125 RKKFEEITKVDAYDQVRAGIDACLAGGLRVKVNVVALKGINDD 167
>gi|167469633|ref|ZP_02334337.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis FV-1]
Length = 212
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
L + VC C +C + LS + +I TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 73
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
++ T+R ++ L + R+ ++ Q ++AG I + +
Sbjct: 74 RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 124
Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
P +F + + I +AG + +VL++ +ND
Sbjct: 125 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169
>gi|157825701|ref|YP_001493421.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
gi|157799659|gb|ABV74913.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
Length = 416
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +++ + C +C FC G K + + Y+ EV+FTG D
Sbjct: 132 KSRAFIQVQNGCDHFCTFCIIP--YGRGKSRSVPIGAIAEQVKYLVLN-GFKEVVFTGVD 188
Query: 154 P-LILSH----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
S +++K L + ++ LR S + + + I+ EL + + + +
Sbjct: 189 VTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRL-SSIDVAE---IDDELFELIAYSER-- 242
Query: 208 YIAIHA 213
I H
Sbjct: 243 -IMPHF 247
>gi|22126899|ref|NP_670322.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis KIM 10]
gi|45440835|ref|NP_992374.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Microtus str. 91001]
gi|108807062|ref|YP_650978.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Antiqua]
gi|108813002|ref|YP_648769.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Nepal516]
gi|145599807|ref|YP_001163883.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
Pestoides F]
gi|165924730|ref|ZP_02220562.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166211503|ref|ZP_02237538.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167423923|ref|ZP_02315676.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|21959935|gb|AAM86573.1|AE013903_10 molybdopterin biosynthesis protein A [Yersinia pestis KIM 10]
gi|45435693|gb|AAS61251.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Microtus str. 91001]
gi|108776650|gb|ABG19169.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Nepal516]
gi|108778975|gb|ABG13033.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Antiqua]
gi|145211503|gb|ABP40910.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Pestoides F]
gi|165923790|gb|EDR40922.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166207274|gb|EDR51754.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167056772|gb|EDR66535.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Mediaevalis str. K1973002]
Length = 341
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
L + VC C +C + LS + +I TGG+P +
Sbjct: 32 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 88
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
++ T+R ++ L + R+ ++ Q ++AG I + +
Sbjct: 89 RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 139
Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
P +F + + I +AG + +VL++ +ND
Sbjct: 140 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 184
>gi|323701900|ref|ZP_08113570.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
DSM 574]
gi|323533204|gb|EGB23073.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
DSM 574]
Length = 445
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 22/143 (15%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEV 147
+K+ C C +C R ++++ T A +I +
Sbjct: 148 TAYIKVAEGCDNRCAYCAIPNIRGRFRSRPLESIVAEAKTLVA----NGTREIILIAQDT 203
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G D I L K+L L+ I ++ +R P R LI+ + + K
Sbjct: 204 TRYGQD--IYGQYSLDKLLWLLQDIPDLKWIRI----LYCYPNRFTDGLIKAIAQLPKVC 257
Query: 208 -YIAIHANHPYEFSEEAIAAISR 229
YI + H E + A+ R
Sbjct: 258 KYIDLPVQHAN---NEILRAMGR 277
>gi|322383763|ref|ZP_08057514.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321151975|gb|EFX44918.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 389
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
++C VYCRFC GS +G VL + + I E++ GG +
Sbjct: 74 TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 128
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186
+ LR IK + HS P
Sbjct: 129 KFSYYTNLLREIKKRFDITMHSFSPA 154
>gi|320193986|gb|EFW68619.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
Length = 419
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|322435966|ref|YP_004218178.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
gi|321163693|gb|ADW69398.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
Length = 532
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 40/182 (21%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
CP +C FC G + ++ + I +I D P+ L+
Sbjct: 164 RGCPKHCSFCSVWR----TDGQKPRQRQFQSVIDEIVNLRRIGFRFIALADDNFYPVTLT 219
Query: 159 HKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
RL + L L I+ + +L++ L + K +
Sbjct: 220 DLRLAREQGNQAKLDELIAIRSERF-----------------QLMEELSKLPKDMVFFTQ 262
Query: 213 AN-HPYEFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVEL 264
E + + A+ R G ++ ++V LK + N E LA ++TF +
Sbjct: 263 ITMEAGE-DGDYLDAMRRANIKGALVGVEAVTPEGLKAVFKDFNYSGEALAKQLQTFKKH 321
Query: 265 RI 266
+
Sbjct: 322 GV 323
>gi|269469075|gb|EEZ80630.1| pyruvate-formate lyase-activating enzyme [uncultured SUP05 cluster
bacterium]
Length = 207
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YPD + + CP CR+C +++ + K T D E + +I+ + + + V+F+
Sbjct: 18 YPDNLSCVVFTQGCPWRCRYCHNHDLIPTSKQTQF---DWEQIVEFIKTRVGLLDAVVFS 74
Query: 151 GGDP 154
GG+P
Sbjct: 75 GGEP 78
>gi|218133712|ref|ZP_03462516.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
43243]
gi|217991087|gb|EEC57093.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
43243]
Length = 447
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
LK+ C C +C V +V + + A + E+ ++ L +
Sbjct: 150 LKIAEGCDKCCTYCII-PKVRGSYRSVPMDELIKQAED-LAEQGVKELILVAQETSLYGT 207
Query: 159 H----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
K L ++L L I ++ +R P+ I+ LIQ +K K Y+ +
Sbjct: 208 DLYGEKSLHRLLHELAAIDGIEWIRI----LYCYPEEIDDTLIQAIKSEPKVCHYLDLPI 263
Query: 214 NHPY 217
H
Sbjct: 264 QHAN 267
>gi|167465547|ref|ZP_02330636.1| hypothetical protein Plarl_23811 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 377
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
++C VYCRFC GS +G VL + + I E++ GG +
Sbjct: 62 TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 116
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186
+ LR IK + HS P
Sbjct: 117 KFSYYTNLLREIKKRFDITMHSFSPA 142
>gi|147678706|ref|YP_001212921.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI]
gi|146274803|dbj|BAF60552.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI]
Length = 451
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFT 150
PD ++L L + C + CR+C + E+ + + +S A+ ++ ++ + F
Sbjct: 68 PDTLVLMLTYACNMACRYCCQGEIP-AARENQMSQAVAYRAVDWLMRNSADAETVNIGFF 126
Query: 151 GGDPLI 156
GG+PL+
Sbjct: 127 GGEPLL 132
>gi|82617353|emb|CAI64265.1| hypothetical protein [uncultured archaeon]
gi|268323060|emb|CBH36648.1| hypothetical protein, radical SAM superfamily [uncultured archaeon]
Length = 401
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIW---- 145
+++L+ + C C FC+ + G ++G + D + +A ++ +
Sbjct: 56 EKLLINPYNGCSHNCLFCYSHALGGYFSIFRERGVLAVFNDFDKIIA--RQLDGLNVASC 113
Query: 146 EVIFTGGDPLI-------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ DP LS K L+ + I VQ S I+ ++
Sbjct: 114 GYLSPVTDPFQRINAKYELSEKILKAFIDR--NIP-VQFTTKGS---------ISERALK 161
Query: 199 CLKEAGKP---VYIAIHANHPYE-------FSEEAIAAISRLANAGIILLSQS-VLLKGI 247
+K+ V I A E + E + I RLA+AGI + + ++ +
Sbjct: 162 IIKKQEHSFGEVSILTMAEDKRERLMAGGASTAELVRNIERLADAGIFAVCRIDPIIPYV 221
Query: 248 NDDPEILANLMRTFVELR 265
DD E L L++ V+
Sbjct: 222 TDDEEGLETLVQKVVDAG 239
>gi|189465617|ref|ZP_03014402.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
17393]
gi|189437891|gb|EDV06876.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
17393]
Length = 432
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150
LK+ C C +C + G + ++ + Y+ K QI E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPV--EEILDEVRYLVNKGVKEFQIIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERPN 244
>gi|160931620|ref|ZP_02079015.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753]
gi|156869491|gb|EDO62863.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753]
Length = 437
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLK 245
E+ + +K P+ I++H +P E + EA++ I R A AGI + Q VL
Sbjct: 133 EISRIIKMHISPMNISVHTTNP-ELRVKMMKNPRAGEALSIIRRFAQAGIKINCQIVLCP 191
Query: 246 GINDDPEILANLM 258
G ND E+ L
Sbjct: 192 GYNDGEELKRTLS 204
>gi|288925016|ref|ZP_06418952.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
gi|288338206|gb|EFC76556.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
Length = 450
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150
R LK+ C +C +C G + ++S + EAAL E++ T
Sbjct: 153 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206
Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G GD +H+ ++K L ++ ++ R S ++P + EL++ +
Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259
Query: 208 YIAIHA 213
H
Sbjct: 260 AFMPHF 265
>gi|237755862|ref|ZP_04584458.1| putative oxygen-independent coproporphyrinogen III oxidase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691973|gb|EEP60985.1| putative oxygen-independent coproporphyrinogen III oxidase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 365
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C V + L + EA L Y+ I + F GG P L +
Sbjct: 12 CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69
Query: 161 RLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
++ +++ ++ +KH + L ++P+ + + +K+AG
Sbjct: 70 KIAEIIDFIKNNVKHQKNLEI---TVEINPKTYEYDEFKIIKDAGVN 113
>gi|228990331|ref|ZP_04150297.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
gi|228769407|gb|EEM18004.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
Length = 468
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F
Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ K +++++ R
Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177
>gi|228996442|ref|ZP_04156083.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
gi|228763325|gb|EEM12231.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
Length = 468
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F
Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ K +++++ R
Sbjct: 157 FGGEPLMA-WKVVKQIVTYARS 177
>gi|229004086|ref|ZP_04161888.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
gi|228757184|gb|EEM06427.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
Length = 468
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F
Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG+PL+ K +++++ R
Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177
>gi|207092233|ref|ZP_03240020.1| hypothetical protein HpylHP_04483 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 418
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQIAGLKRIRIGS 221
>gi|170289684|ref|YP_001736500.1| Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170173764|gb|ACB06817.1| Predicted Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 573
Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 99 LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY-IQEKSQI-WEVIFTGG 152
L + + C + C +CF R V S ++ + + ++EK V TGG
Sbjct: 125 LVVTNRCNMDCWYCFFYAERMGYVYE-----PSLEEIDRMVDLMLKEKPAHGNAVQITGG 179
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA- 210
+PL L ++ + L K V ++ ++ + P L++ L+EAG +Y +
Sbjct: 180 EPL-LRDDIVE--IVKLLKRKGVTHIQLNTEGVAFLEK---PWLMKELREAGVNTIYFSF 233
Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H PY ++++ L +L +V+ KGIND
Sbjct: 234 DGVTPIANPKTHWETPYILDLARKSSMTSL------VLVPTVI-KGINDR 276
>gi|313906547|ref|ZP_07839877.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
gi|313468616|gb|EFR63988.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
Length = 218
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C + C +C M ++ G + + E ++YI+E + V TGG+PL+
Sbjct: 21 AVFVRFRGCNLNCSYC--DTMWANEPGCPYAEESPEQIVSYIEETK-VKNVTLTGGEPLL 77
>gi|261402234|ref|YP_003246458.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
gi|261369227|gb|ACX71976.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
Length = 287
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y ++LK+ + C + C +C+ ++ + K + ++ Y+ ++ FTG
Sbjct: 2 KY---LILKITNRCNLNCIYCY----ANNKNDKDMDFKTAKRSIDYLLNLDDKLKIQFTG 54
Query: 152 GDPLILSHKRLQKVLK 167
G+PL L+ K ++KV+K
Sbjct: 55 GEPL-LNFKLIEKVVK 69
>gi|83944995|ref|ZP_00957361.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
HTCC2633]
gi|83851777|gb|EAP89632.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
HTCC2633]
Length = 468
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 24/124 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ + C +C FC V S+ + +A ++ + EV G
Sbjct: 166 TAFVTVQEGCDKFCTFC-----VVPYTRGAEWSRPVDQIVAEVRALAAKGVREVTLLGQN 220
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
GDP L ++++ L I ++ +RF + P+ ++ +LIQ
Sbjct: 221 VNAFHGEAPKGDPEGGVWG-LGRLVRHLAKIGGIERIRFTTSH----PKDMDDDLIQAFA 275
Query: 202 EAGK 205
+ K
Sbjct: 276 DEPK 279
>gi|194333737|ref|YP_002015597.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Prosthecochloris aestuarii DSM 271]
gi|194311555|gb|ACF45950.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Prosthecochloris aestuarii DSM 271]
Length = 251
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 93 YPDRI-LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP I + C + C +C E+V + L +++ E + ++ + + V+ T
Sbjct: 33 YPGMISAVLYTAGCNLRCIYCHNPELVLPDRIQRLGAEERETIVTWLVRNRMLLDAVVVT 92
Query: 151 GGDPLILS--HKRLQKV 165
GG+PL+ L +
Sbjct: 93 GGEPLLHPALPGLLGWI 109
>gi|295102362|emb|CBK99907.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii L2-6]
Length = 325
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + +C + CR+C + ++ VL+ ++ LA + + + V TGG+PL+
Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70
Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
K + +++ L+ I ++ + +
Sbjct: 71 RKGVDQLVAGLKAIPGIRKVTMTT 94
>gi|255658436|ref|ZP_05403845.1| organic radical activating enzyme family protein [Mitsuokella
multacida DSM 20544]
gi|260849772|gb|EEX69779.1| organic radical activating enzyme family protein [Mitsuokella
multacida DSM 20544]
Length = 213
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 92 RYPDRILLKLLH------VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
YP R L CP C C E+ +Q G LS + + L + +
Sbjct: 13 LYPVRALGPGNRLGIWLAGCPRRCPGCSNPELWQAQAGQALSQERLQELLRPFLSREDLG 72
Query: 146 EVIFTGGDPLILSHKRL 162
V+ TGGDP + L
Sbjct: 73 GVVVTGGDPFFQADALL 89
>gi|224024976|ref|ZP_03643342.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
18228]
gi|224018212|gb|EEF76210.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
18228]
Length = 474
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 73 EREDP-IGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
E EDP + + ++ + I R Y +RI+ L L + C C +C + L
Sbjct: 60 ECEDPQLLEEIYALAREIKQRFYGNRIVMFAPLYLSNYCVNSCTYCPYHIKNKTIARKKL 119
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ ++ + +Q+ + G DPL + + + ++T+ IKH
Sbjct: 120 TQEEIRREVIALQDMGHKRLALEAGEDPLHNPIEYILESIQTIYSIKH 167
>gi|148256302|ref|YP_001240887.1| putative arylsulfatase regulatory protein [Bradyrhizobium sp.
BTAi1]
gi|146408475|gb|ABQ36981.1| putative Arylsulfatase regulatory protein [Bradyrhizobium sp.
BTAi1]
Length = 370
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 37/161 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
++ C V C +C+ + ++S AA ++ + + + V++ G+PL
Sbjct: 1 MQPTAFCNVDCDYCY---LPNRTDPRIMSHDIVAAAADFVFQGGLDASDFTVVWHAGEPL 57
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDP-------QRINPELIQCLKEAGKP 206
++ + R + P P IN + G
Sbjct: 58 VVPPS---WYREAFA--------RIGAAAPANKAVPHAIQTNGMLINDDWCDLFLAHGVR 106
Query: 207 VYIAIH---ANH-PYEFS-------EEAIAAISRLANAGII 236
V ++I H + A+ + +L G+
Sbjct: 107 VGVSIDGPAFLHDARRRTRSGKGTHAAALRGLRKLRERGVP 147
>gi|146303298|ref|YP_001190614.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145701548|gb|ABP94690.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
Length = 400
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
L L + C C +CF++ G +K ++ + + + Y++++ + +V T GG+PL
Sbjct: 73 LLLTYNCNFNCTYCFQK---GFRKDLTVTEEVMKGFINYVRKRERGRKVRVTFFGGEPL- 128
Query: 157 LSHKRLQKVLKTLRYIK 173
L K+++++ ++L +K
Sbjct: 129 LELKKIEEISRSLSDLK 145
>gi|157827747|ref|YP_001496811.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
85-389]
gi|229890631|sp|A8GY24|MIAB_RICB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157803051|gb|ABV79774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
85-389]
Length = 446
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 34/141 (24%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L S + L +++ L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239
Query: 179 RFHSRVPIVDPQRINPELIQC 199
R+ + PI + +LI
Sbjct: 240 RYTTSHPID----MTDDLISL 256
>gi|284162386|ref|YP_003401009.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Archaeoglobus profundus DSM 5631]
gi|284012383|gb|ADB58336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Archaeoglobus profundus DSM 5631]
Length = 234
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
CP C +C + + G ++ ++ I+E I V TGG+PL+ + L
Sbjct: 26 GCPFRCPYCQNYRLF--EGGVEVTPEEIAKK---IRENYLIEGVCLTGGEPLVQNLDELT 80
Query: 164 KVLKTLRY 171
K+++ L+
Sbjct: 81 KLIELLKE 88
>gi|239831834|ref|ZP_04680163.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
intermedium LMG 3301]
gi|239824101|gb|EEQ95669.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
intermedium LMG 3301]
Length = 369
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 31/167 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + ++ TGG+PL+
Sbjct: 54 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 110
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
K + +++ L + + + S++ R EL +C V +
Sbjct: 111 RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 164
Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
H + + + I AGI + +V LK N
Sbjct: 165 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFN 206
>gi|159037574|ref|YP_001536827.1| radical SAM domain-containing protein [Salinispora arenicola
CNS-205]
gi|157916409|gb|ABV97836.1| Radical SAM domain protein [Salinispora arenicola CNS-205]
Length = 601
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
P+ ++ P+ IL C + C +C+ + + G LS+ A
Sbjct: 4 PLFADDRRPV--------SVILKLRGETCNIDCLYCYEKRK-EAPGGARLSADGAAQLTA 54
Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ V GG+PL + ++L L +V + S
Sbjct: 55 IFGARPV--AVELHGGEPLTIGRAAFAEILDRLAAQPNVVRVSMQS 98
>gi|148643115|ref|YP_001273628.1| coenzyme PQQ synthesis protein [Methanobrevibacter smithii ATCC
35061]
gi|148552132|gb|ABQ87260.1| coenzyme PQQ synthesis protein, SAM family [Methanobrevibacter
smithii ATCC 35061]
Length = 232
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R + C + C +C + + G +++ D AA+ ++ + FTGG+P
Sbjct: 21 QRQIFVRFAGCNLNCSYCDTNDSKSEKSGKLMTVDDVLAAIENVR-TPDCHVISFTGGEP 79
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
+ + + + ++IL P++I + I+ L + + H N
Sbjct: 80 SLYP-----EFINEVARQTDLKIL---LETNGTLPEKI--DFIEKLDIVSLDIKLPEHFN 129
>gi|89896265|ref|YP_519752.1| hypothetical protein DSY3519 [Desulfitobacterium hafniense Y51]
gi|89335713|dbj|BAE85308.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 441
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFT 150
R P + +++ C + C CF S + YI + + + T
Sbjct: 94 RQPTLVEIEVTEGCNLRCPVCF-MAANDFHPDPNPSLEALGEKYRYILRHTNSDTSIQLT 152
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + + L +++ R I Q + ++ ++ R NP+ +Q L EAG I
Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205
Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257
+ + YE + AI+ AG+ ++ +++GIN+ E+L L
Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
V + I + A G+ F + + +
Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291
>gi|284163849|ref|YP_003402128.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
gi|284013504|gb|ADB59455.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
Length = 417
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L + C C +C + + + ++ E A A I + E+ TG D +
Sbjct: 126 ILPIARGCMSDCSYCITK-QATGKIDSPPIEENVEKARALI--HAGAKEIRITGQDTGVY 182
Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181
+L ++L + I+ +R
Sbjct: 183 GWDEGERKLHRLLSEICAIEGDFRVRVG 210
>gi|218290137|ref|ZP_03494299.1| RNA modification enzyme, MiaB family [Alicyclobacillus
acidocaldarius LAA1]
gi|218239846|gb|EED07035.1| RNA modification enzyme, MiaB family [Alicyclobacillus
acidocaldarius LAA1]
Length = 497
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 12/143 (8%)
Query: 73 EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + P + + R + + + C +C +C + + L
Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYCI-VPYTRGVERSRLPEDVL 235
Query: 132 EAALAYIQE-KSQIWEVIFTGGDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
+ +QE I + D + L ++L+ + I + +RF + +P
Sbjct: 236 REVVELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNSIPGIGWIRFTTS----NP 291
Query: 190 QRINPELIQCLKEAGKPVYIAIH 212
ELI + E+ + V IH
Sbjct: 292 WNFTDELIDAIAES-ENVVEHIH 313
>gi|167769534|ref|ZP_02441587.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
17241]
gi|167668502|gb|EDS12632.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
17241]
Length = 470
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
Y +RI+ L L + C CR+C LS +D + +Q+
Sbjct: 78 RNYGNRIVMFAPLYLSNYCVNECRYCPYHHHNTHIARRQLSQEDIVREVVALQDMGHKRL 137
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ TG DP+ + + + +KT+ IKH
Sbjct: 138 ALETGEDPVNCPIEYVLESIKTIYGIKH 165
>gi|170288910|ref|YP_001739148.1| radical SAM protein [Thermotoga sp. RQ2]
gi|205829920|sp|B1LAW7|RLMN_THESQ RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|170176413|gb|ACB09465.1| radical SAM enzyme, Cfr family [Thermotoga sp. RQ2]
Length = 343
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 45/214 (21%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDT 131
+ + ++ ++ +PDRI + CPV C FC R G +LS +
Sbjct: 85 EDGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMER- 143
Query: 132 EAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKV----LKTLRYIKHVQILRFHSRVPI 186
+EK +I V++ G G+PL+ ++ + K + I ++ + + +
Sbjct: 144 -------EEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIG-IRRITIST---V 192
Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHP-----YEFSEEAIA-AISRL--------AN 232
P RI L E G V +A+ + P + +I +
Sbjct: 193 GIPDRIIQ-----LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQRK 247
Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
G + + VL++GIND+ L ++I
Sbjct: 248 TGNRVTIEYVLIRGINDEISDAKKLAEILKNMKI 281
>gi|147919895|ref|YP_686354.1| putative molybdopterin biosynthesis protein A [uncultured
methanogenic archaeon RC-I]
gi|121685400|sp|Q0W3L5|MOAA_UNCMA RecName: Full=Probable molybdenum cofactor biosynthesis protein A
gi|110621750|emb|CAJ37028.1| putative molybdopterin biosynthesis protein A [uncultured
methanogenic archaeon RC-I]
Length = 307
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L + C + C +C G + + + A +A I + + ++ F+GG+PL+
Sbjct: 15 ISLTNRCNLKCIYC---HNEGEEDSGSEITVEEVAQIARICARYGVDKIKFSGGEPLLRR 71
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
++L+ L ++ V + + + + LKE+G V +++ +
Sbjct: 72 D--FDEILRALPPMRDVSVTTNGT---------LLAARAESLKESGLDRVNVSLDSMDRD 120
Query: 218 EFS---------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
F+ ++ + I + G+ + V LKGIN+D
Sbjct: 121 RFTFITQCKGQFDKVLDGIDAALSVGLTPVKINMVYLKGINED 163
>gi|330810983|ref|YP_004355445.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379091|gb|AEA70441.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 322
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+
Sbjct: 15 ISLTSACNYACTYCVPDGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYI 172
+L++ + + +
Sbjct: 73 SP--KLERFMTAVGQM 86
>gi|323188903|gb|EFZ74187.1| radical SAM superfamily protein [Escherichia coli RN587/1]
Length = 419
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGTPSALSAHDLARIINTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|320014299|gb|ADV97870.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 326
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 19/162 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + ++ TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
++ T+R ++ L + R+ ++ Q ++AG + +++ + P
Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLTAINVSVDSMDPR 127
Query: 218 EFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
+F + + I +AG + +VL++ +ND
Sbjct: 128 QFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169
>gi|237747112|ref|ZP_04577592.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
HOxBLS]
gi|229378463|gb|EEO28554.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
HOxBLS]
Length = 227
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 93 YPDRILLKLL-HVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIF 149
+P R+ + CP CR+C R + + G L + LA+++ + + E V+F
Sbjct: 22 FPGRLAAVVFCQGCPWRCRYCHNRHLLPTGEGGRYL----WQDVLAWLKTRQGLLEGVVF 77
Query: 150 TGGDPLI 156
+GG+PL+
Sbjct: 78 SGGEPLL 84
>gi|187735295|ref|YP_001877407.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425347|gb|ACD04626.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 353
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
+ ++ C + CR C + E AL I + +++ ++ TGGDP
Sbjct: 17 VFWEVTRACALACRHCRAVAQPRPHPDELTH----EEALRLIDQLAELRPPMLVLTGGDP 72
Query: 155 LILSH 159
++
Sbjct: 73 VMRPD 77
>gi|73666881|ref|YP_302897.1| 2-methylthioadenine synthetase [Ehrlichia canis str. Jake]
gi|123759460|sp|Q3YSK6|MIAB_EHRCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|72394022|gb|AAZ68299.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ehrlichia canis str.
Jake]
Length = 441
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 31/142 (21%)
Query: 56 IARQFI----PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
I +Q I P + + +P E + + + + C +C F
Sbjct: 118 IKKQVINIDFPVISKFDAIPVEEYTKNQETS--------------AFISVQEGCNKFCTF 163
Query: 112 CFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDP-LILSHKR-----LQ 163
C V S+ EA A + S I E+ G + + L
Sbjct: 164 C-----VVPYTRGEEYSRTVEAIFNEALVLADSGIKEITLIGQNVNAYHGTYKGCEWDLG 218
Query: 164 KVLKTLRYIKHVQILRFHSRVP 185
K+++ + I +++ +R+ + P
Sbjct: 219 KLIQHIAKIPNIERIRYTTSHP 240
>gi|158522869|ref|YP_001530739.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
gi|158511695|gb|ABW68662.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
oleovorans Hxd3]
Length = 330
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 30/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQ--IWEVIFTGGD 153
+ + C + C +C L+ D E L+ I+ + I +V TGG+
Sbjct: 19 VSVTDRCNLNCIYCNPSRY-----AKKLAHSDILTYEELLSIIEAGAGLGITKVRITGGE 73
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + ++ I + L + + + L++AG I I
Sbjct: 74 PLVRKDA--CDFIGSVSAISGITDLSLTTNGVV------LADCAGRLRKAGVN-RINISL 124
Query: 214 NHPYE-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250
+ + I AG + V+++GINDD
Sbjct: 125 DTLDRRRFKTITGHDRFDRVWKGIQAALKAGFSPVKLNMVVMRGINDD 172
>gi|84687002|ref|ZP_01014885.1| radical SAM domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664976|gb|EAQ11457.1| radical SAM domain protein [Rhodobacterales bacterium HTCC2654]
Length = 315
Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
EDP + SP + +P+ + +C + C C+ + ++ +
Sbjct: 14 EDPKVTADGSPRATVALTHPETLWFNTGTLCNITCEGCYIESSPTNDALAYMTRGEVAGY 73
Query: 135 LAYIQEKS-QIWEVIFTGGDPLILSH 159
L I+ + + E+ FTGG+P +
Sbjct: 74 LDQIKARGWPVTEIGFTGGEPFMNPD 99
>gi|158521211|ref|YP_001529081.1| radical SAM domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510037|gb|ABW67004.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
Length = 306
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 25/179 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+K + C C +C K ++ + + + + + EV +GG+P +
Sbjct: 15 IKANYTCNSNCVYCCAGNR---GKQRAMTFDEIAENIQFFIDTYGVQEVCLSGGEPTVHR 71
Query: 159 H--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-N 214
L V LR H +RFH R Q L V + H
Sbjct: 72 DFLSTLDFVRSKGLRTYLHTNGIRFHDRT--FAKQ------CAALVNRTL-VGFSFHTPG 122
Query: 215 HPYEFSEEAI------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
E + A I+ L + L + +V++K + +L+ + ++
Sbjct: 123 LCAELTGSAKTFGQRIDGIANLLAESVPLRTNTVIIKQNYRHLPAIVDLISSL---GVR 178
>gi|94968118|ref|YP_590166.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
Ellin345]
gi|94550168|gb|ABF40092.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
Ellin345]
Length = 591
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
CP +C FC G ++ ++ + I + + D P+ L+
Sbjct: 234 RGCPKHCSFCSVWR----TDGQKPRQRNFQSVIEEIVDLRRRGFRFIALADDNFYPVTLT 289
Query: 159 HKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
RL K + LR ++ ++ RFH L+ L K +
Sbjct: 290 DLRLAKAQNNTEKLRNLEQIREERFH--------------LMAQLARLPKDMVFFTQIT- 334
Query: 216 PYEFSEEAI--AAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266
E +E+A A+ G ++ ++V LK + N + LA ++ F +
Sbjct: 335 -MEAAEDAAFLDAMRAANIKGALVGVEAVTPEGLKAVYKDFNYSGDRLAQQLQEFRRHGV 393
>gi|39997325|ref|NP_953276.1| radical SAM domain-containing protein [Geobacter sulfurreducens
PCA]
gi|39984216|gb|AAR35603.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
gi|307634986|gb|ADI84985.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter sulfurreducens KN400]
Length = 342
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 29/189 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-L 157
CP C FC + + G G + S+ + +A+ + + G L
Sbjct: 10 FISHQGCPHRCVFCDQERIAGR-AGRLPSAAEIHSAVKTFGRGRPVEAAFYGGT--FTSL 66
Query: 158 SHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
+++L L+ ++H V+ +R +R P ++ E LK G V + + +
Sbjct: 67 PRNEQERLLAALQPLRHDGSVRSVRLSTR-----PDALDAETAGFLKSMGVASVELGVQS 121
Query: 214 NHPYEFS--------EEAIAAISRLANAGIILLSQ-SVLLKGINDDPE-ILANLMRTF-- 261
+ + A L + GI + +Q L G D E L +L R
Sbjct: 122 MDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPG--DSRERSLDSLTRILDL 179
Query: 262 --VELRIKP 268
V LRI P
Sbjct: 180 KPVSLRIYP 188
>gi|327398449|ref|YP_004339318.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411]
gi|327181078|gb|AEA33259.1| Radical SAM domain protein [Hippea maritima DSM 10411]
Length = 351
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 36/210 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
++ C + C C + + LS +D + I E+ + V+ TGG+PL
Sbjct: 10 FEITPRCNLNCIHCRTSASMNLED--RLSFEDITNIIEEISEQFKP-VVVLTGGEPL--- 63
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
L++ + + H + +R + I+ L +K+ V +++ + E
Sbjct: 64 ---LREDVFDIADFIHSKGMRVG---LATNGTLIDEGLALKIKKHIDIVSLSLDGSTA-E 116
Query: 219 FSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
++ A + L + + S K D E L + K
Sbjct: 117 VHDDFRKVKGAFDATVRAANILRETSVEFIINSSFTKRNQSDIENTYRLAKFL---GAKA 173
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
+Y+ + ++I L
Sbjct: 174 WYMFM----------IVPTGRAEEIREELI 193
>gi|302342465|ref|YP_003806994.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
gi|301639078|gb|ADK84400.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
Length = 414
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 95 DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147
+ ++L + C C +C +R G G ++ +D + Y++E +
Sbjct: 3 NHVVLDISGKCNARCTWCVTGYRNRQ-GVAYGRYMTPQDVAKVIDYLREQRIITPDAYFF 61
Query: 148 IFTGGDPLILSHKRLQKVLKTLRY 171
++ G+PLI + ++++ L
Sbjct: 62 LYNWGEPLI--NPHFAEIVEELNR 83
>gi|260910078|ref|ZP_05916759.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
gi|260635790|gb|EEX53799.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
Length = 456
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 37/211 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + CP +C FC++ + G + +AAL I ++ D L+ S
Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKSFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213
+ ++ + ++ + V F S + Q I +LI+ EAG + V+I
Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276
Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266
N + AA+ RL + GI++ V L DD ++ R V+ +
Sbjct: 277 ENLKASNKCQNLQRDYSAAVKRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330
Query: 267 KP------YYLHHPDLAAGTSHFRLTIEEGQ 291
Y H GT F+ EG+
Sbjct: 331 DNAITTATY--HILTPYPGTRQFKRMEAEGR 359
>gi|148263280|ref|YP_001229986.1| radical SAM domain-containing protein [Geobacter uraniireducens
Rf4]
gi|146396780|gb|ABQ25413.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
Length = 288
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 40/199 (20%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYI 138
P G H R+ L + C + C +C RR G + + +
Sbjct: 15 PCFGGNHHKNGRMHLAVAPRCNIKCGYCSRRHDCANESRPGVTSRLLTPQEAIVKVREVV 74
Query: 139 QEK---SQIWEVIFTG-GDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI 192
I + G GDPL + + + L H+ + + P++I
Sbjct: 75 ASDILGPIIKVIGIAGPGDPL-ANEETFETF--RLIGAEFPHLIKC-MSTNGLL-LPEKI 129
Query: 193 NPELIQCLKEAGKPVYIAI-----------HAN-HPYEFS-EEAIA-----AISRLANA- 233
+L+Q L V I H H + + EA + L A
Sbjct: 130 --DLLQELDLHSLTVTINALDPRVGAKIYSHILYHGKKLTGTEAAEILIANQLEGLRRAA 187
Query: 234 --GIILLSQSVLLKGINDD 250
G+ + +V + G+N+D
Sbjct: 188 AYGMTIKVNTVYIPGVNED 206
>gi|320451516|ref|YP_004203612.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01]
gi|320151685|gb|ADW23063.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01]
Length = 349
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 68/202 (33%), Gaps = 49/202 (24%)
Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
Y +R + L + CP C FC + G L++ + + L I I
Sbjct: 89 YENRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGISPRDIR 145
Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----------- 193
V+ G G+PL+ L VLK +R + H + + P+RI
Sbjct: 146 NVVLMGMGEPLL----NLGNVLKAIRTM-------LHPKGLAMSPRRITLSTVGIPKGIH 194
Query: 194 ----PELIQCLK--------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+L L E + + H E E +R +
Sbjct: 195 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYSVGEILEAVRHYYARTKRRVTFEYT-- 252
Query: 242 VLLKGINDDPEILANLMRTFVE 263
LLKG+ND P A L+ ++
Sbjct: 253 -LLKGLNDHP-WQARLLAKLLK 272
>gi|310828575|ref|YP_003960932.1| Radical SAM domain protein [Eubacterium limosum KIST612]
gi|308740309|gb|ADO37969.1| Radical SAM domain protein [Eubacterium limosum KIST612]
Length = 294
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 69/231 (29%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGG--D 153
+ + C C +C R K + AL I + V+ TG D
Sbjct: 25 MNIYRGCCHGCIYCDSRSECYQNTDFDTVKKK-QDALRLIARDLKSKKKKGVVGTGAMSD 83
Query: 154 PLILSHKRLQKVL-KTLRYIKH-----------------VQIL-RFHSRVPIVDPQRIN- 193
P +R +++ + L+ I H + +L R S P++ I
Sbjct: 84 PYN-PFERKERLTREALKLIDHYGFGVAIATKGSLVTRDIDLLSRIQSHSPVICKVTITA 142
Query: 194 -PELIQCLKEAGKPVYIAIHANHPYEFSEEAI--AAISRLANAGI---ILLSQSVLLKGI 247
+ + + E G P + A+ L++AGI ILL +L I
Sbjct: 143 ADDALSGIVEPGAP--------------PSSKRFEAVKALSDAGIYIGILL--MPILPFI 186
Query: 248 NDDPEILANLMRTFVELRIK---P------------YYLHHPDLAAGTSHF 283
D+ + + +++ + + P YY + D HF
Sbjct: 187 EDNTDNIQSIVEQGAKCGARFIYPGFGVTLRDVQRDYYFNQLD-----QHF 232
>gi|239625448|ref|ZP_04668479.1| radical SAM domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239519678|gb|EEQ59544.1| radical SAM domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 385
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + + C C C R S + E ++ I++ Q++ TGG+P I +
Sbjct: 5 VIVTYRCNARCSMCNRY--------KAPSKPEEEISIETIRKLPQMYFTNITGGEPFIRT 56
Query: 159 HKRLQKVLKTLRYIKHVQIL 178
L+ +++ L IK +I+
Sbjct: 57 D--LKDIVRELY-IKSDRIV 73
>gi|317475092|ref|ZP_07934360.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908736|gb|EFV30422.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
Length = 234
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y + +++ C + C C R G + + K L +++ I TG
Sbjct: 4 LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56
Query: 152 GDPLILSHKRLQKVLKTLRY 171
G+P L+ + ++ +L+ +R
Sbjct: 57 GEP-SLNVRAIRHILERVRA 75
>gi|124006098|ref|ZP_01690934.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123988275|gb|EAY27928.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 438
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 34/175 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C C FC G K S ++ A+ I + ++ EV+ TG
Sbjct: 140 RTRTFLKVQDGCNYNCSFCTIPLARG--KSRSDSIENIIASAHKIGQT-EVKEVVLTG-- 194
Query: 154 PLILSH---------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ + +R ++K L + ++ +R S ++P ++ ++I ++
Sbjct: 195 -VNIGDFGIQEGRRKERFIDLVKALDEVDGLERIRISS----IEPNLLSNDVIAFTAQSK 249
Query: 205 KPVYIAIHANHP-YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+ H + P S + + A+ R G+ + D + LM
Sbjct: 250 R---FVPHFHIPLQSGSNKILKAMRRRYERGLYV-----------DRVNKIKELM 290
>gi|52079259|ref|YP_078050.1| hypothetical protein BL03114 [Bacillus licheniformis ATCC 14580]
gi|52784624|ref|YP_090453.1| hypothetical protein BLi00825 [Bacillus licheniformis ATCC 14580]
gi|52002470|gb|AAU22412.1| conserved protein YfkA [Bacillus licheniformis ATCC 14580]
gi|52347126|gb|AAU39760.1| putative protein [Bacillus licheniformis ATCC 14580]
Length = 373
Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 58 RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
Q P E + + D GD + ++ +C + C C
Sbjct: 5 MQARPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ ++ L L I ++ + TGG+P +LS K +++ + L H +
Sbjct: 54 TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109
Query: 177 ILR 179
+R
Sbjct: 110 GVR 112
>gi|332796946|ref|YP_004458446.1| radical SAM domain-containing protein [Acidianus hospitalis W1]
gi|332694681|gb|AEE94148.1| radical SAM domain protein [Acidianus hospitalis W1]
Length = 322
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 28/160 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P K+ C ++C FC + + S++ + + ++ S I + F GG+
Sbjct: 23 PGYATFKVTSRCNLHCTFC--NPEYYNGELGEGSTETIKKIIDNLR-DSSIVVLSFEGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P I + L H + + R+N + + L + + +H
Sbjct: 80 PTIRKD------ILELLEYAHDGSFYV---MLTTNGYRLNDD--EFLTKLADRIDF-LHY 127
Query: 214 N----HPYEFSEEAIAAISRL---ANAGIILLSQSVLLKG 246
+ H + A+ L GI + Q+V+ +
Sbjct: 128 SIDEYHWN------VKALDTLCRFRQYGIKVNVQTVVTRY 161
>gi|294852307|ref|ZP_06792980.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL
07-0026]
gi|294820896|gb|EFG37895.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL
07-0026]
Length = 329
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 14 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 71 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167
>gi|228920856|ref|ZP_04084195.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838787|gb|EEM84089.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 337
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++ C C +C E+ G + +L+ + E + ++ TGG+
Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
PL+ L +++ L ++ ++ + + + Q + LK+AG K V I++
Sbjct: 77 PLLRKD--LPQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128
Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
H N ++ + I+ AG+ + V+ KG+ND
Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIAAAKAAGLEVKVNMVVKKGMNDS 175
>gi|149920929|ref|ZP_01909390.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
gi|149818201|gb|EDM77656.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
Length = 471
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 34/172 (19%)
Query: 94 PDRILLKLLHV--CPVYCRFC---FRREMVGSQKGTVLSS--KDTEAALAYI---QEKSQ 143
R L +HV C V C FC ++ LS+ + +A + Q +
Sbjct: 68 DRRALFVYVHVPFCAVRCGFCNLFTQKHPPEELPARWLSTLFEQMDAVAEAVGVGQADTG 127
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELI 197
GG P L L+ +L LR RF +P P+ + +
Sbjct: 128 FARWALGGGTPTFLEAGALEALLVRLRE-------RFGVDLPTTPSSVETSPETCTDDRL 180
Query: 198 QCLKEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
L+ AG + + I + P + A+AA+ R+ +L+
Sbjct: 181 AVLEAAGTRRISIGVQSFAEASLRAVGRPQ-AAPLAVAALDRIRARSFPILN 231
>gi|53804481|ref|YP_113916.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
str. Bath]
gi|81682096|sp|Q608N1|MIAB_METCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|53758242|gb|AAU92533.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
str. Bath]
Length = 458
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
+ + ++ C YC FC V S+ + +A I ++ + EV G
Sbjct: 148 KAFVSVMEGCGKYCTFC-----VVPYTRGEEISRPVDDVIAEIVALAEQGVREVNLLGQN 202
Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
D + L + + I +RF + P+ + LI+ ++
Sbjct: 203 VNAYRGVLADGGMADLALLMHYVAAVDGID---RIRFTTSHPV----EFSDALIEAFRDI 255
Query: 204 GKPVYIAIH 212
+ +H
Sbjct: 256 P-QLVSHLH 263
>gi|319789539|ref|YP_004151172.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
gi|317114041|gb|ADU96531.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
Length = 441
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 16/126 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
R +K+ C ++C +C + G + AL+ I+ + E++ TG
Sbjct: 142 RTRAFVKVQQGCQLFCTYCIIPKARGPMVSLPP-----QEALSQIKRLVEAGYKEIVLTG 196
Query: 152 GDPLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
+ L ++++ I + LR S V+P P LI+ + + K V
Sbjct: 197 THLGAYGREFEGWSLARLVEEAVKIPGLYRLRLSS----VEPVEFTPHLIEVITGSEK-V 251
Query: 208 YIAIHA 213
H
Sbjct: 252 APHYHV 257
>gi|229592098|ref|YP_002874217.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens SBW25]
gi|229363964|emb|CAY51493.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens SBW25]
Length = 322
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ + Y+ E + I + TGG+PL+
Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVEYLIEAAGIDRLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+L+ + + + + + + Q + +L ++ K + +++ P
Sbjct: 73 SP--KLEAFMGAVGQMG-LSDI-----SLTTNGQLLARKLPLLVEAGIKRINVSLDTLDP 124
Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248
F A + + AGI + V L+G N
Sbjct: 125 DAFRSIARGGDLATVLDGMDQARAAGIKIKVNMVPLRGQN 164
>gi|188585891|ref|YP_001917436.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350578|gb|ACB84848.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 336
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C V +L+ +D E + + ++ FTGG+PL+
Sbjct: 21 ISVTDRCNLRCFYCMPTSGVEKMSHPQILNFEDIERIVTA-AANLGVSKIRFTGGEPLVR 79
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
K++ T+ I ++ L +
Sbjct: 80 KD--FSKLVNTISRIPGIEDLSLTT 102
>gi|50085046|ref|YP_046556.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
gi|49531022|emb|CAG68734.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
Length = 335
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 25/172 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-----ALAYIQEKSQIWE 146
RY ++ + + C C +C + + KD ++ I +
Sbjct: 12 RYKRKLRISVTDRCNFKCMYCM------PEHPEWIKKKDLLDFEALYLFCEFMVQNGIQK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
+ TGG+PL+ + + ++ L+ ++ + + R + + LK+AG
Sbjct: 66 IRITGGEPLM--RQGVVHFVRDLQKLRSIGLKRIS----MTTNAHYLAKYAYDLKQAGLD 119
Query: 206 PVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQSVLLKGINDD 250
+ I++ + +F + + I G+ +VL+KG NDD
Sbjct: 120 DLNISLDSLDAQQFLKLTKKSIEPVLQGIQAAQLVGLPFKINTVLMKGKNDD 171
>gi|237720682|ref|ZP_04551163.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449517|gb|EEO55308.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 436
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|121997684|ref|YP_001002471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
SL1]
gi|229890553|sp|A1WVF7|MIAB_HALHL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|121589089|gb|ABM61669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
SL1]
Length = 474
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
+ ++ C YC FC G + ++ D A + + E+ + EV G +
Sbjct: 166 TAYVSVMEGCSKYCSFCVVPYTRGDEISRPVA--DVLAEVRSLAEQ-GVREVNLLGQNVN 222
Query: 154 --PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPI------VDPQRINPELIQCL 200
L L +++ + I + +RF + P +D R PEL L
Sbjct: 223 AYAGALDDGERADLGLLIEAVARIPGIDRIRFTTSHPAEFHSGLIDAYRDVPELADFL 280
>gi|300867546|ref|ZP_07112196.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp.
PCC 6506]
gi|300334434|emb|CBN57366.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp.
PCC 6506]
Length = 439
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 35/170 (20%)
Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
RY L++ C C FC + G+Q+ + + A + + +
Sbjct: 137 RYRTTPEAVAYLRIAEGCDYRCAFCIIPHLRGNQRSRTI--ESIVAEAEQLAAEGVKEII 194
Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ + G D I +L ++L L + + +R H P P+++ ++
Sbjct: 195 LISQITTNYGKD--IYGEPKLAELLHALGKVD-IPWIRMHYAYPTGL----TPKVMAAIQ 247
Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + Y+ + H + E + A++R G+ND
Sbjct: 248 ETPNILPYLDLPLQHSH---PEILRAMNR------------PFQAGVNDS 282
>gi|294794074|ref|ZP_06759211.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
gi|294455644|gb|EFG24016.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
Length = 325
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 16 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMNILGAF-HHIGVKAVRLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRY 171
++++L ++
Sbjct: 75 YP--HIEELLGRIKE 87
>gi|284048541|ref|YP_003398880.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acidaminococcus fermentans DSM 20731]
gi|283952762|gb|ADB47565.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Acidaminococcus fermentans DSM 20731]
Length = 236
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
YP ++ L C + C +C E++ + + S+D E +AY+ + I + V+ +
Sbjct: 14 YPGKVACTLFTGGCNLRCPYCHNSELLEGE----MPSQDMEEVMAYLDVRKGILDGVVIS 69
Query: 151 GGDPLILSHKRLQKVLKTLRY 171
GG+P + S L L L+
Sbjct: 70 GGEPCLQSD--LVPFLARLKE 88
>gi|15644025|ref|NP_229074.1| biotin synthase [Thermotoga maritima MSB8]
gi|4981826|gb|AAD36344.1|AE001782_5 biotin synthetase, putative [Thermotoga maritima MSB8]
Length = 348
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 89 IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I +Y R +++ +VC C +C R + K ++ ++ +
Sbjct: 42 IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
V+ +G DP + + ++K ++ +
Sbjct: 102 KTIVLQSGEDPYYMPD-VISDIVKEIKKM 129
>gi|307721435|ref|YP_003892575.1| Radical SAM domain-containing protein [Sulfurimonas autotrophica
DSM 16294]
gi|306979528|gb|ADN09563.1| Radical SAM domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 347
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 10/87 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ +VC C+FC + ++ +D +A + I + +P
Sbjct: 47 INPTNVCADVCKFCAYSATRKNPNQYTMTHEDIMKIVAEVDAHGAKEVHIVSAHNP---- 102
Query: 159 HKRLQKVLKTLRYIK------HVQILR 179
+ L L + IK HV+ L
Sbjct: 103 NVTLDWYLGIFKKIKTAYPHLHVKALT 129
>gi|169335088|ref|ZP_02862281.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
17244]
gi|169257826|gb|EDS71792.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
17244]
Length = 309
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 47/206 (22%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY--------CRFCFRREMV 118
N P D + ++ + ++ L CP C FC +
Sbjct: 4 WNGKPYYSLDYMLKERYN-------KKIYKVALNGGMTCPNRDGKIDTRGCIFCSK---- 52
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD---PL------ILSHKRLQKVLKTL 169
G + K + I +++I + L+K+
Sbjct: 53 GGSGD--FAGKGIDDITTQINNQAEILREKTNASNFIAYFQAYTNTYAPTDYLRKIYTEA 110
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEE----- 222
++ L +R P ++ E + L+E KP++I + E + E
Sbjct: 111 LSHPNIVALSIATR-----PDCLDKEALDLLEELNNIKPIWIELGLQTINEKTAEYIRRG 165
Query: 223 -----AIAAISRLANAGIILLSQSVL 243
+A+ L GI ++ ++L
Sbjct: 166 YPLSCFDSAVKELRKRGIEVIVHTIL 191
>gi|21230455|ref|NP_636372.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66769551|ref|YP_244313.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. campestris str. 8004]
gi|24211977|sp|Q8PBX1|MOAA_XANCP RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|81304494|sp|Q4URN0|MOAA_XANC8 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|21112018|gb|AAM40296.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66574883|gb|AAY50293.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. campestris str. 8004]
Length = 339
Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
LP+ P+ D PL+ + L ++ C C +C + V G
Sbjct: 2 LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LS E + + ++ TGG+PL+ K L +++ L I+ ++ L
Sbjct: 54 LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103
>gi|326408980|gb|ADZ66045.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
M28]
gi|326538693|gb|ADZ86908.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
M5-90]
Length = 329
Score = 38.2 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 14 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 71 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167
>gi|284161837|ref|YP_003400460.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
gi|284011834|gb|ADB57787.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
Length = 375
Score = 38.2 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151
P + ++ C + C+ C +Q + + E I + + ++ TG
Sbjct: 6 KPFIVFWEVTRACLLACKHC----RAKAQTKPHPNELNLEECYDLIDQLKKWNPLLIITG 61
Query: 152 GDPLILSHKRLQKVLK 167
GDPL+ L +L+
Sbjct: 62 GDPLMRKD--LFDILE 75
>gi|309389586|gb|ADO77466.1| Radical SAM domain protein [Halanaerobium praevalens DSM 2228]
Length = 330
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+ C + C C+R G GT L++ + + L I+ + +IF+GG+PL+
Sbjct: 9 TNKCNLSCPHCYRNA--GEDLGTELNTNEAKKMLDQIKA-ANFHLMIFSGGEPLLRDD-- 63
Query: 162 LQKVLKTLRYI 172
+ +++ I
Sbjct: 64 IFELMAYASAI 74
>gi|295115538|emb|CBL36385.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
SM4/1]
Length = 443
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 17/119 (14%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
R +K+ +C +C R + V+ + AA Y I S
Sbjct: 142 HTRAFIKVQDGYNQFCSYCIIPYTRGRVRSRPMEDVVQEVEALAASGYKEIVLTGIHLSS 201
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ T +P + L ++ L I ++ +R S ++P+ I E + L
Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254
>gi|291549884|emb|CBL26146.1| GTP cyclohydrolase subunit MoaA [Ruminococcus torques L2-14]
Length = 329
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + +L+ + E I + I ++ TGG+PL+
Sbjct: 14 ISVTDRCNLRCVYCMPEEGIEQLPHEQILTFDEIERVCR-ISTELGISKIKLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
K L +L ++ I ++ + +
Sbjct: 72 -RKGLPDLLGKIKRIPGIEQVTLTT 95
>gi|317051924|ref|YP_004113040.1| Radical SAM domain-containing protein [Desulfurispirillum indicum
S5]
gi|316947008|gb|ADU66484.1| Radical SAM domain protein [Desulfurispirillum indicum S5]
Length = 291
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 13/89 (14%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150
++ ++ H C C FC G K E L IQ + V
Sbjct: 18 LIFQITHGCSHNACTFC------GMYTDKRFRMKPLETVLEEIQNIPAAYAATVRRVFLA 71
Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178
GD I ++L +L L + +Q +
Sbjct: 72 DGDATIYPTEKLTPILDALNAHFPALQRI 100
>gi|281412936|ref|YP_003347015.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
gi|281374039|gb|ADA67601.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
Length = 348
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + +++ ++ +
Sbjct: 114 YMPD-VISDIVREIKKM 129
>gi|254293796|ref|YP_003059819.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
49814]
gi|254042327|gb|ACT59122.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
49814]
Length = 359
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C M K VLS ++ + + I ++ TGG+PL+
Sbjct: 46 LSITDRCDLRCTYCMPERMQFLPKSDVLSFEELTRLVDAFIAR-GITKLRVTGGEPLVRK 104
Query: 159 H--KRLQKVLKTL 169
+ L K + L
Sbjct: 105 DAIRLLSKFAERL 117
>gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus
sp. 7L76]
gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
TUSoD Ef11]
Length = 321
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95
>gi|168215418|ref|ZP_02641043.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
NCTC 8239]
gi|182382388|gb|EDT79867.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
NCTC 8239]
Length = 331
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ + ++K + I ++ + + + + ++ L E G K V I++
Sbjct: 80 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + ++ + +I + + + +V+L+ N + + +L+ + I
Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 189
Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
F+ +T E +I+ K+ +S L P + + G GK+
Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 247
>gi|188992759|ref|YP_001904769.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. campestris str. B100]
gi|226707392|sp|B0RTE0|MOAA_XANCB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|167734519|emb|CAP52729.1| Molybdenum cofactor biosynthesis protein A,probable [Xanthomonas
campestris pv. campestris]
Length = 339
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
LP+ P+ D PL+ + L ++ C C +C + V G
Sbjct: 2 LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LS E + + ++ TGG+PL+ K L +++ L I+ ++ L
Sbjct: 54 LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103
>gi|110801520|ref|YP_699075.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
SM101]
gi|123341686|sp|Q0SS32|MOAA_CLOPS RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|110682021|gb|ABG85391.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
SM101]
Length = 323
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ + ++K + I ++ + + + + ++ L E G K V I++
Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + ++ + +I + + + +V+L+ N + + +L+ + I
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181
Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
F+ +T E +I+ K+ +S L P + + G GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239
>gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11]
gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative
[Enterococcus faecalis V583]
gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
HIP11704]
gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11]
Length = 324
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|4589922|dbj|BAA76928.1| molybdenum cofactor biosynthesis protein A [Clostridium
perfringens]
Length = 323
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ + ++K + I ++ + + + + ++ L E G K V I++
Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + ++ + +I + + + +V+L+ N + + +L+ + I
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181
Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
F+ +T E +I+ K+ +S L P + + G GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 239
>gi|51595534|ref|YP_069725.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 32953]
gi|149366845|ref|ZP_01888879.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
CA88-4125]
gi|153948299|ref|YP_001401799.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 31758]
gi|162421199|ref|YP_001605953.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
gi|165938348|ref|ZP_02226906.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011582|ref|ZP_02232480.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167400426|ref|ZP_02305939.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419585|ref|ZP_02311338.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|170025144|ref|YP_001721649.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis YPIII]
gi|186894590|ref|YP_001871702.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis PB1/+]
gi|218928323|ref|YP_002346198.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
gi|229841099|ref|ZP_04461258.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843203|ref|ZP_04463349.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894040|ref|ZP_04509226.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
gi|229903439|ref|ZP_04518552.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
gi|24211993|sp|Q8ZGW5|MOAA_YERPE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|51588816|emb|CAH20430.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 32953]
gi|115346934|emb|CAL19823.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
gi|149291219|gb|EDM41294.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
CA88-4125]
gi|152959794|gb|ABS47255.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis IP 31758]
gi|162354014|gb|ABX87962.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
gi|165913726|gb|EDR32345.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. IP275]
gi|165989530|gb|EDR41831.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166962326|gb|EDR58347.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050375|gb|EDR61783.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|169751678|gb|ACA69196.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis YPIII]
gi|186697616|gb|ACC88245.1| molybdenum cofactor biosynthesis protein A [Yersinia
pseudotuberculosis PB1/+]
gi|229679209|gb|EEO75312.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
gi|229689550|gb|EEO81611.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697465|gb|EEO87512.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703925|gb|EEO90938.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
gi|262361197|gb|ACY57918.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
D106004]
gi|262365246|gb|ACY61803.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
D182038]
Length = 326
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + ++ TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ T+R ++ L + R+ ++ Q ++AG I + + P
Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
+F + + I +AG + +VL++ +ND
Sbjct: 127 RQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169
>gi|228933203|ref|ZP_04096059.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826364|gb|EEM72141.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 383
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181
Query: 261 F 261
Sbjct: 182 L 182
>gi|261343456|ref|ZP_05971101.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
DSM 4541]
gi|282568603|gb|EFB74138.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
DSM 4541]
Length = 326
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 21/162 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C S + L+ + +V TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAF-ADLGTEKVRITGGEPTMRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ +R + ++ + + R+ ++ ++AG + + + P
Sbjct: 76 D--FSDIIAAIRENQSIKKI-----AVTTNGYRMARDIQTW-RDAGLN-AVNVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249
+F+ + + I AG + +VL+K +ND
Sbjct: 127 RQFAAITGQDKFFQVMQGIDAAFEAGFEKVKVNAVLMKNVND 168
>gi|212690677|ref|ZP_03298805.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855]
gi|237725132|ref|ZP_04555613.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. D4]
gi|265754350|ref|ZP_06089539.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA]
gi|212666777|gb|EEB27349.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855]
gi|229436398|gb|EEO46475.1| involved moaA/nifB/pqqE family protein [Bacteroides dorei
5_1_36/D4]
gi|263235059|gb|EEZ20614.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA]
Length = 498
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 39/192 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDPLI 156
L + C +C++C + S T+ + I Q+ +V GG+ +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200
Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
++ +LK L R I +++P+ +L+Q ++E G V I++
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249
Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
A H + E + + L ++G+ SVL N +LA L+
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308
Query: 262 -----VELRIKP 268
+ RI P
Sbjct: 309 HLKHIRDWRIIP 320
>gi|49477412|ref|YP_036045.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328968|gb|AAT59614.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 377
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|291545179|emb|CBL18288.1| ribonucleoside-triphosphate reductase class III activase subunit
[Ruminococcus sp. 18P13]
Length = 168
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 9/93 (9%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
G N S + G P + CP +C C + + D LA I
Sbjct: 7 GTENDSIVDG-----PGIRFTIFVQGCPHHCPGC---HNPQTHDFAGGTDTDCAQLLARI 58
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ V F+GG+P L ++ LR
Sbjct: 59 DANPLLDGVTFSGGEPFC-QASVLAELGAKLRQ 90
>gi|312116333|ref|YP_004013929.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
vannielii ATCC 17100]
gi|311221462|gb|ADP72830.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
vannielii ATCC 17100]
Length = 345
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 27/175 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + A + ++ TGG+PL+
Sbjct: 31 VSVTDRCDFRCVYCMPDRMQFLPKAELLTLEELDRLCAGFIA-KGVRKIRLTGGEPLM-- 87
Query: 159 HKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
+ L +++ L + V + SR+ E LK+AG + V I++
Sbjct: 88 RRNLLLLVRALSRHLDAGTLDEVTLTSNGSRM---------AEFAASLKDAGVRRVNISL 138
Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
+F A I G+ + V LK IN+ L
Sbjct: 139 DTRDADKFRAVTRRGDLAAVLAGIRAAKAVGLHVKINMVALKAINESEIEDMLLW 193
>gi|251790124|ref|YP_003004845.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591]
gi|247538745|gb|ACT07366.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591]
Length = 340
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 47/255 (18%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + VC C +C S + +V TGG+P +
Sbjct: 29 LSITDVCNFRCTYCLPDGYQPNGATPHRFLSLSEIRRIGRAF-ADLGTEKVRLTGGEPSL 87
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
+++ +R ++ L + R+ ++ ++AG + + +
Sbjct: 88 RRDFV--EIIAAIRENPAIRTL-----AVTTNGYRLARDVASW-RDAGLT-ALNVSVDSL 138
Query: 216 -PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTFVELR 265
P +F + + + A + +VL++ +ND +L +R
Sbjct: 139 DPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDVNDS-----SLHTFLEWIR 193
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---------ILDLPGG 316
+P EG+++ + +SG + + G
Sbjct: 194 TRP---IQLRFIELME-----TGEGREMFR--RHHVSGQVIRERLLQQGWLQQVRERSDG 243
Query: 317 YGKVKIDTHNIKKVG 331
+V +VG
Sbjct: 244 PAQVFSHPDYQGEVG 258
>gi|229187971|ref|ZP_04315068.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1]
gi|228595507|gb|EEK53230.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1]
Length = 361
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 26/177 (14%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ +L C + C C R E + L+ ++ + + I E + ++FTGGDPL+
Sbjct: 2 IWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGDPLMR 59
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------- 208
+ + IK + +R S P P + E IQ KE G +
Sbjct: 60 PD--IYDIAD--YAIK--KGVRV-SMTPSATPN-VTKETIQKAKEVGIARWAFSLDGPTA 111
Query: 209 -IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H +E + I AI L I + +V+ + E +A L+
Sbjct: 112 EIHDHFRGVEGSFELT---INAIRYLHELEIPIQINTVISNYNVNVLEDMAKLVEEL 165
>gi|23016109|ref|ZP_00055869.1| COG1964: Predicted Fe-S oxidoreductases [Magnetospirillum
magnetotacticum MS-1]
Length = 456
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 35/172 (20%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDP 154
L+++ C + C CF + G S + EA L + E V +GG+P
Sbjct: 99 ALVEVTDSCGLDCPTCFAQSRPGR---GHRSLAEVEAMLDAVVRSEGGSPDIVQISGGEP 155
Query: 155 LILSHKRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
++ ++L+ R I+HV + R+ R +P+ L G + +
Sbjct: 156 ADHP--QILEILRAAKARPIRHVMLNTNGVRL-----AR-DPDFATALAGLGPGFEVYLQ 207
Query: 213 ANHPYEFSEEA-------------IAAISRLANAGI--ILLSQSVLLKGIND 249
EA A++ L GI L+ V+ KG+ND
Sbjct: 208 ---WDSLEPEALSVLRGADLREVRKGALAALDRHGISTTLVC--VMAKGVND 254
>gi|289432755|ref|YP_003462628.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
gi|288946475|gb|ADC74172.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
Length = 416
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 24/128 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C RR ++S + A Y E++
Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178
Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
TG + S L +++ + + LR S + P I L+ K
Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRL-- 232
Query: 208 YIAIHANH 215
NH
Sbjct: 233 -----CNH 235
>gi|297543929|ref|YP_003676231.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841704|gb|ADH60220.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 453
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
+ + C + C +C++R+ K +S K ++ + I K + ++ GG+PL+
Sbjct: 89 IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146
Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179
+K++ + + + I V+I+
Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171
>gi|289577626|ref|YP_003476253.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
gi|289527339|gb|ADD01691.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
Length = 453
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
+ + C + C +C++R+ K +S K ++ + I K + ++ GG+PL+
Sbjct: 89 IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146
Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179
+K++ + + + I V+I+
Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171
>gi|253575296|ref|ZP_04852634.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251845293|gb|EES73303.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 368
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 99 LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD-- 153
L +VC +C FC FR++ G + LS ++ +AY+++ + E GG
Sbjct: 67 LYFTNVCESHCAFCSFRKDQ-GEEGAYTLSGEE---MVAYVKQHITPGVREFHIVGGHNN 122
Query: 154 --PLILSHKRLQKVLKTLRYIKHVQI 177
P L+ + + HV I
Sbjct: 123 HVPFQYYVDSLKALKENF---PHVTI 145
>gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
Length = 588
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 19/73 (26%)
Query: 13 DLYNANLIKKEQIDEIKEISNHYSIAL-----------TPVIANLINPHN--------PN 53
L + Q D I+ + Y + + +P +L N PN
Sbjct: 59 TLQGLAPDPENQADAIETVRQTYGVRVVTDATGLLPVQSPYFLSLEKTENGLLLSGFAPN 118
Query: 54 DPIARQFIPQKEE 66
D RQ + E
Sbjct: 119 DAARRQLVALLSE 131
>gi|15893169|ref|NP_360883.1| hypothetical protein RC1246 [Rickettsia conorii str. Malish 7]
gi|81527850|sp|Q92G77|MIAB_RICCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|15620380|gb|AAL03784.1| unknown [Rickettsia conorii str. Malish 7]
Length = 445
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|84688004|ref|ZP_01015867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maritimibacter
alkaliphilus HTCC2654]
gi|84663985|gb|EAQ10486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
HTCC2654]
Length = 443
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIF 149
L + C +C FC R V +L + + E + I Q
Sbjct: 154 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPPERILREARELVERGVREITLLGQNVNAYH 213
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
GD L +++ L I ++ +RF + P
Sbjct: 214 GAGDG---GDWSLARLIWALNDIDGLERIRFTTSHPN 247
>gi|317470624|ref|ZP_07930010.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
gi|316901915|gb|EFV23843.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
Length = 453
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL
Sbjct: 96 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 155
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
+ K+L ++L KH + RF
Sbjct: 156 MNFEVVKQLVAYGRSLEE-KHSKKFRF 181
>gi|313674192|ref|YP_004052188.1| miab-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126]
gi|312940890|gb|ADR20080.1| MiaB-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126]
Length = 439
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C FC G + + ++ + I + E++ TG
Sbjct: 140 RTRTFLKVQDGCNYHCAFCTIPLARGKSRSDTI--ENIVKSAKQIAS-EDVKEIVLTGVN 196
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD I KR ++ + ++ + +V+ + RF R+ ++P + E+I+ + ++ +
Sbjct: 197 TGDFGIQEGKRKERFVDLVKELDNVEGIDRF--RISSIEPNLLTNEIIEFVSQSKR---F 251
Query: 210 AIHA 213
H
Sbjct: 252 VPHF 255
>gi|221067914|ref|ZP_03544019.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
KF-1]
gi|220712937|gb|EED68305.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
KF-1]
Length = 380
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 78/244 (31%), Gaps = 46/244 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ ++LS ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
PL+ K ++ ++ L + R P P + + LKEAG
Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGLPLDLTLTTNASLLARKARALKEAGL 150
Query: 206 PVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQ----SVLLKGINDDPEIL 254
+ ++ + A LS V+ +G NDD +
Sbjct: 151 NRVTVSLDGLDDAVFRRMNDVDFPVTDVLAGIEAAQATGLSHIKVNMVVKRGTNDD--QI 208
Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312
+ R F I T+ +R+ + +++A L+ ++ P
Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263
Query: 313 LPGG 316
PG
Sbjct: 264 APGE 267
>gi|167746208|ref|ZP_02418335.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
gi|167654201|gb|EDR98330.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
Length = 442
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL
Sbjct: 85 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 144
Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
+ K+L ++L KH + RF
Sbjct: 145 MNFEVVKQLVAYGRSLEE-KHSKKFRF 170
>gi|229587170|ref|YP_002845671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
africae ESF-5]
gi|228022220|gb|ACP53928.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia africae ESF-5]
Length = 445
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|162452546|ref|YP_001614913.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56']
gi|238066605|sp|A9F1Y8|RIMO_SORC5 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|161163128|emb|CAN94433.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56']
Length = 488
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 26/180 (14%)
Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
+ L P E GD G +K+ C C FC ++ G+Q+
Sbjct: 120 ERMLVGNPAEWLIQAGDPRTLSTPG------GSAYVKIAEGCNRTCSFCVIPDLRGAQRS 173
Query: 124 TVLSS--KDTEA-ALAYIQEKSQI-WEVIFTGGDPLILSH----KRLQKVLKTLRYIKHV 175
+ ++ E A A ++E + I + I G D S L ++++ + + V
Sbjct: 174 RPIPDVVREVEQLAAAGVREINLISQDTIAYGRDAAGRSEGGARATLAQLVERVADVPGV 233
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAG 234
+ +R + P+ + +L++ L + V Y+ + H A A+ R G
Sbjct: 234 RWVRL----FYLYPETMTDDLVELLAGHPRVVPYVDMPLQH-------AADAMLRRMRRG 282
>gi|15807908|ref|NP_285567.1| hypothetical protein DR_A0244 [Deinococcus radiodurans R1]
gi|6460688|gb|AAF12393.1|AE001863_18 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 355
Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 38/209 (18%)
Query: 97 ILLKLLHVCP-VYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGD 153
++++ C C FC F R+ S + + +A + E +++ + G+
Sbjct: 111 VVVQATRGCSWNRCTFCTFYRDRPFSVQAPDAFAAHLQAVAELLGEGARLRRSIFLADGN 170
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L+LS+++L ++ R P R + + K V
Sbjct: 171 ALMLSNRKLLPLIAQARA---------------AFPGREVHGFLDVFTGSRKTVA----- 210
Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND---DPEILANLMRTFVELR--IKP 268
E + + G LL + D L+ + P
Sbjct: 211 -DWRELRGAGVRRVYLGLETGHD-----PLLAWL-DKPGSAAQATELIHDLKAAGLNVAP 263
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ G ++ + + +++ L
Sbjct: 264 --IFMT-GVGGQTYAAAHLADTLRLLERL 289
>gi|315608055|ref|ZP_07883048.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
gi|315250524|gb|EFU30520.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
Length = 450
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150
R LK+ C +C +C G + ++S + EAAL E++ T
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206
Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G GD +H+ ++K L ++ ++ R S ++P + EL++ +
Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259
Query: 208 YIAIHA 213
H
Sbjct: 260 AFMPHF 265
>gi|308184088|ref|YP_003928221.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180]
gi|308060008|gb|ADO01904.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180]
Length = 418
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQITGLKRIRIGS 221
>gi|291550955|emb|CBL27217.1| Organic radical activating enzymes [Ruminococcus torques L2-14]
Length = 216
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ C + C +C M ++ + E L Y+ E I V TGG+PL+
Sbjct: 21 AVFIRFKGCNLRCSYC--DTMWANEPDCQYKEETPEEILNYVLET-GIRNVTLTGGEPLL 77
Query: 157 LSHKRLQKVLKTLRY 171
+++++ L
Sbjct: 78 QKD--IRELIHLLLQ 90
>gi|178847576|pdb|3CIX|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde
From Thermotoga Maritima In Complex With Thiocyanate
Length = 348
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++K ++ +
Sbjct: 114 YMPD-VISDIVKEIKKM 129
>gi|167032510|ref|YP_001667741.1| molybdenum cofactor synthesis domain-containing protein
[Pseudomonas putida GB-1]
gi|166858998|gb|ABY97405.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
GB-1]
Length = 322
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS+ +AY+ E + + + TGG+PLI
Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADSLARGVAYLIEAAGVERLRITGGEPLI 72
Query: 157 LSHKRLQKVLKTLRYIK 173
RL L + +
Sbjct: 73 SP--RLDAFLAGVAKLD 87
>gi|104780794|ref|YP_607292.1| molybdenum cofactor biosynthesis protein A [Pseudomonas entomophila
L48]
gi|95109781|emb|CAK14486.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
entomophila L48]
Length = 322
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q L++ +AY+ E + I + TGG+PLI
Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LTADALARGVAYLVEAAGIERLRITGGEPLI 72
Query: 157 LSHKRLQKVLKTLRYI 172
RL+ LK + +
Sbjct: 73 SP--RLEAFLKAVAGL 86
>gi|327539767|gb|EGF26370.1| SSU ribosomal protein S12P methylthiotransferase [Rhodopirellula
baltica WH47]
Length = 476
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154
LK+ C C FC + +G S E + + S + EV+ D
Sbjct: 178 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 232
Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
R L ++LK L I+ + +R P I+ LI L A + V
Sbjct: 233 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASAKRIV 286
>gi|323694864|ref|ZP_08109017.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
gi|323501090|gb|EGB16999.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
Length = 486
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
+ CP +C +C + + K + S ++ YI + ++ EV+ D
Sbjct: 213 IFTGRGCPAHCNYCVYPQTLHGHKYRLRSPENVVEEFEYIAKNFPEVHEVVIE-DDTFTA 271
Query: 158 SHKRLQKVLKTLRY 171
+ +R+ K+ + L
Sbjct: 272 NKERVIKICELLEE 285
>gi|299769674|ref|YP_003731700.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1]
gi|298699762|gb|ADI90327.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1]
Length = 343
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 31/168 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEVIFTGGD 153
+ + C C +C + L+ +D EA + + + I + TGG+
Sbjct: 26 ISVTDRCNFKCVYCM------PEHPEWLNKQDLLSFEALFQFCRFMVQQGIESIRITGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI- 209
PL+ + + ++ L+ +K + + R + + + LK+AG + +
Sbjct: 80 PLM--RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLD 133
Query: 210 ---AIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+I E + E + I +AG+ VL+K NDD
Sbjct: 134 SLDSIQF---KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178
>gi|260431178|ref|ZP_05785149.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415006|gb|EEX08265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
lacuscaerulensis ITI-1157]
Length = 439
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 13/110 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206
Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
L ++ L I ++ +RF + P + +LI+
Sbjct: 207 AYHGAGPNGDMTLAGLIWELNRIDGLERIRFTTSHPND----MTDDLIEA 252
>gi|238650870|ref|YP_002916725.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
Rustic]
gi|238624968|gb|ACR47674.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
Rustic]
Length = 445
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|237711763|ref|ZP_04542244.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454458|gb|EEO60179.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 234
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
Y + +++ C + C C R G + + K L +++ I TG
Sbjct: 4 LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56
Query: 152 GDPLILSHKRLQKVLKTLRY 171
G+P L+ + ++ +L+ +R
Sbjct: 57 GEP-SLNVRAIRHILERVRA 75
>gi|256391490|ref|YP_003113054.1| molybdenum cofactor biosynthesis protein A [Catenulispora
acidiphila DSM 44928]
gi|256357716|gb|ACU71213.1| molybdenum cofactor biosynthesis protein A [Catenulispora
acidiphila DSM 44928]
Length = 329
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 21/164 (12%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
+ L C + C +C E + K +LS ++ + I + ++ FTGG+PL+
Sbjct: 15 VSLTDRCNLRCTYCMPAEGLPWLPKAELLSDEEILRLIG-IAVHLLGVDQIRFTGGEPLV 73
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
L ++ + + + + L LK+AG V +++
Sbjct: 74 --RPGLATLVARVAQLDPRPRISLTTNALG------LARLAPTLKDAGLDRVNVSLDTLD 125
Query: 216 P---YEFSEEAIAA------ISRLANAGIILLSQSVLLKGINDD 250
P E + A + A + SVL++G+ND
Sbjct: 126 PAVFRELTRRDRFADVVAGLEAAAAAGLTPVKVNSVLMRGVNDT 169
>gi|83590083|ref|YP_430092.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
gi|83572997|gb|ABC19549.1| Radical SAM [Moorella thermoacetica ATCC 39073]
Length = 470
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 55/233 (23%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-- 144
RY +L L C + C FC R+ + L ++ + L Y+ +I
Sbjct: 11 ASRYN---ILPLTSTCNLGCLFCSHRQNPPGVETWRLQPLKGEEIDNLLDYLDGDRKIVI 67
Query: 145 --WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQC 199
G+PL L I+ V+ RF R + + P LI+
Sbjct: 68 GESATRLIEGEPLTHPDF--------LAIIRKVRR-RF-PRARLEITTNGTLLTPNLIRE 117
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L + +P+ I + N S E + N G L Q+ +
Sbjct: 118 LADL-QPLEINLSLNSA---SPEGRRRLMGDRNPGAAL--QAPM---------------- 155
Query: 260 TFVELRIKPYYLHHPDLAA-----GTSHFR-LTIEEGQKIVASLKEKISGLCQ 306
+ I ++ L A G FR + + +++ + G +
Sbjct: 156 ALQQAGI----IYQGSLVACPWLVGWDDFRETILYLARAGARTIRVFLPGYTR 204
>gi|15613715|ref|NP_242018.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
gi|10173768|dbj|BAB04871.1| BH1152 [Bacillus halodurans C-125]
Length = 498
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 21/164 (12%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
I + + L + + + CP C +C F + + G+V + +
Sbjct: 152 IVERQLAVLPDLDELDRGVSVYIGIPFCPTKCAYCTFPAYAINGKNGSVEAFLAGLHYEI 211
Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPI 186
EA ++ + + V F GG P ++ +++ + +TL + V+ L V
Sbjct: 212 EATGKWLTDHQIPVTTVYFGGGTPTSITAEQMDALYETLYDSFPAMNQVRELT----VEA 267
Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
P I PE I+ LK+ + I P F E + AI R
Sbjct: 268 GRPDTITPEKIEVLKKWNVDRISIN-----PQSFENETLQAIGR 306
>gi|313891888|ref|ZP_07825490.1| six-Cys-in-45 modification radical SAM protein [Dialister
microaerophilus UPII 345-E]
gi|313119663|gb|EFR42853.1| six-Cys-in-45 modification radical SAM protein [Dialister
microaerophilus UPII 345-E]
Length = 477
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + + ++S A+ ++ S EV F GG+PL
Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
++ +Q+ + +R + H +I+R
Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186
>gi|228945522|ref|ZP_04107872.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229121458|ref|ZP_04250685.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201]
gi|228661922|gb|EEL17535.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201]
gi|228814040|gb|EEM60311.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 383
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181
Query: 261 F 261
Sbjct: 182 L 182
>gi|167630431|ref|YP_001680930.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
gi|238066299|sp|B0TIH8|RIMO_HELMI RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|167593171|gb|ABZ84919.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
Length = 460
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 81/232 (34%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146
+K+ C C +C R + ++ L + + AL I + + +
Sbjct: 163 AYVKIADGCDNRCGYCAIPNLRGRFRSRSEESIVEETRSLVDRGIQEAL-LIAQDTTCYG 221
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
V G RL +++ L I ++ +R P PELI+ + K
Sbjct: 222 VDRYGE-------FRLAQLIGKLASIDGLRWIRL----MYCYPSHFTPELIEAMAAEPKV 270
Query: 207 V-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
Y+ + H +E + +++R +AG+
Sbjct: 271 CRYVDLPLQHA---DDELLRSMNR--HAGV------------------------------ 295
Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
+E ++++ +L+E++ GL +I+ LPG
Sbjct: 296 ----------------------DEIRRLIRTLRERLPGLAIRTSFIVGLPGE 325
>gi|118575230|ref|YP_874973.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
gi|118193751|gb|ABK76669.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
Length = 304
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 44/116 (37%), Gaps = 14/116 (12%)
Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
+ ++ C C FC +M S++ + + + + + ++ V GD L
Sbjct: 31 IFQVTLGCSFNQCSFC---DMYRSKEYSERPWEQVRSEIDLMARQMPDTKRVFLADGDAL 87
Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGKPV 207
L + K+++ + ++ + P I + + + L+EAG +
Sbjct: 88 NLDTDYMVKIVRHVKESFPSLERI-----SCYAMPMNILKKSDDELNRLREAGLDM 138
>gi|114326910|ref|YP_744067.1| radical SAM superfamily protein [Granulibacter bethesdensis
CGDNIH1]
gi|114315084|gb|ABI61144.1| radical SAM superfamily protein [Granulibacter bethesdensis
CGDNIH1]
Length = 331
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 91 HRY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EV 147
RY P + + C + C +C ++ T LA I +++ +
Sbjct: 26 SRYNPLLAQVVVTRRCNLACGYC-------NEYDTFSPPVPLPELLARIDHLAKLRTASI 78
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206
FTGG+PL+ +L + ++ R + + I + R+ I L AG
Sbjct: 79 TFTGGEPLLHP--QLDEAIRAARRHGMIVTM-------ITNGFRLTKAWIDRLNAAGLQG 129
Query: 207 VYIAIHANHPYEFS----EEAIAAISRLAN-AGIILLSQSVLLKGIND 249
+ I+I P E S + LA A + SVL GI+D
Sbjct: 130 MQISIDNLEPDEVSMKSLHSVEKKLGLLAEHAQFKVNVNSVL--GISD 175
>gi|53803496|ref|YP_114807.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath]
gi|53757257|gb|AAU91548.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath]
Length = 455
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 25/166 (15%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
+L++ C + C C+ G + S + L I E +V+ +GG+P +
Sbjct: 102 VLEVTGHCNLRCPVCY--AGSGPDNPSYRSLDEIGRMLDTIVENEGEPDVVQISGGEPTL 159
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
R +LK R ++ L ++ ++ R +P+ + L E G + + +
Sbjct: 160 HP--RFFDILKEARRRP-IRHLMVNTNGIVL--AR-DPDFARRLAEFGPGLEVYLQF--- 210
Query: 217 YEFSEEA-------------IAAISRLANAGIILLSQSVLLKGIND 249
+ A+ L AGI + L KG+ND
Sbjct: 211 DSLDDAVLRQLRGADLARIHEQALEHLNAAGISTSLVATLRKGLND 256
>gi|296447401|ref|ZP_06889327.1| molybdenum cofactor biosynthesis protein A [Methylosinus
trichosporium OB3b]
gi|296255104|gb|EFH02205.1| molybdenum cofactor biosynthesis protein A [Methylosinus
trichosporium OB3b]
Length = 360
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 33/168 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M + +L+ ++ + E+ ++ TGG+PL+
Sbjct: 44 VSVTDRCDFRCVYCMSEHMEFLPRRDLLTLEELDRLCTAFIERGT-RKLRITGGEPLMRR 102
Query: 159 H-----KRLQK-----VLKTLRYIKHVQILRFHS--------RVPIVDPQRINPELIQCL 200
+RL + +L L + L H+ + V ++PE + L
Sbjct: 103 DISSLFRRLSRHLASGLLDELTLTTNGSQLERHAPALADCGVKRVNVSLDTLDPERFRAL 162
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
G +H +A I AG+ + +V LKG+N
Sbjct: 163 TRTG---------DHAR-----VLAGIEAALAAGLQVKLNAVALKGVN 196
>gi|254292730|ref|YP_003058753.1| radical SAM protein [Hirschia baltica ATCC 49814]
gi|254041261|gb|ACT58056.1| Radical SAM domain protein [Hirschia baltica ATCC 49814]
Length = 314
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 16/124 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLIL 157
+C + C C+ + + L+ D ++ +++ E+ FTGG+P +
Sbjct: 36 FNTGTLCNIECANCYIESSPTNDRLVYLTLADILPFFDELESENECGVEIGFTGGEPFMA 95
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQ---RINPELIQCLKEAGKPVYIAI 211
+++ L ++R HS + + + P RI LI + G + + +
Sbjct: 96 P-----QIIDMLEE----SLVRGHSVLVLTNAMHPMMRPRIQAGLINLKERFGNQLTLRV 146
Query: 212 HANH 215
+H
Sbjct: 147 SLDH 150
>gi|226954112|ref|ZP_03824576.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
27244]
gi|226835153|gb|EEH67536.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
27244]
Length = 343
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 26/229 (11%)
Query: 86 LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
L + +Y ++ + + C C +C +K +LS + Y+ +
Sbjct: 11 LPILQDQYARIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFEALFLFCQYMVSQ- 69
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
I + TGG+PL+ + + + L+ ++ + R I + Q LK
Sbjct: 70 GIENIRITGGEPLM--RQGVVHFIAELQALRAEGLKRIS----ITTNAHYLTKYAQQLKN 123
Query: 203 AGKP-VYIA------IHAN--HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
AG + I+ E + +A I A + VL+KG NDD +
Sbjct: 124 AGLDDLNISLDSLDPTQFKSLTKKELAP-VLAGIEAAKQAQLPFKINCVLMKGQNDDQIV 182
Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT--IEEGQKIVASLKEK 300
++ P G H+ + E +I+ LK
Sbjct: 183 PMVKWAKQQDI---PLRFIEFMPLDGDQHWSQQAVVSEA-EILEQLKAH 227
>gi|224536031|ref|ZP_03676570.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522356|gb|EEF91461.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
DSM 14838]
Length = 439
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 14/151 (9%)
Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
HS R LK+ C +C +C G + ++S E A
Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAE 193
Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
E++ TG GD + + ++K L ++ ++ R S ++P + E+I+
Sbjct: 194 GGKEIVLTGVNIGDFGKTTGETFFNLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249
Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
+ + H + P S+E + + R
Sbjct: 250 VSHSR---SFMPHFHIPLQSGSDEVLKLMRR 277
>gi|146323515|ref|XP_754142.2| pentafunctional AROM polypeptide [Aspergillus fumigatus Af293]
gi|129558252|gb|EAL92104.2| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus
Af293]
Length = 748
Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%)
Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157
F R + G G+ SS+ + L ++ E++ +G D + L
Sbjct: 194 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 252
Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208
+ RL+ L H+ LR HSRVP+V P++I+ +++ L P
Sbjct: 253 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 306
Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241
+ + P E ++ +I I+ + GI + SQ+
Sbjct: 307 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 347
>gi|331090885|ref|ZP_08339729.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405531|gb|EGG85062.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 440
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFT 150
LK+ C +C +C R +L + E + + +Q E
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLLKEAEGLAEQGVKELILVAQ--ETTLY 203
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D I K L K+LK L + +Q +R P+ I ELIQ +KE K
Sbjct: 204 GKD--IYGEKSLHKLLKELCKVSGIQWIRI----LYCYPEEITDELIQVMKEEKK 252
>gi|329121946|ref|ZP_08250559.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
gi|327467392|gb|EGF12891.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
Length = 477
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + + ++S A+ ++ S EV F GG+PL
Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
++ +Q+ + +R + H +I+R
Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186
>gi|320167238|gb|EFW44137.1| molybdenum cofactor synthesis 1 isoform 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 517
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 21/120 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C V S G +L++ + LA + + ++ TGG+P +
Sbjct: 47 ISLTERCNLRCVYCMPEHGVELSPNGALLTTDEIIR-LAQLFVSQGVDKIRLTGGEPTVR 105
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPELIQCLKEAGKPVYIAIHAN 214
L +++ L I ++ + + + PQ L++AG H N
Sbjct: 106 KD--LVPLVERLGQIDGLKSIALTTNGIVLGRYLPQ---------LQKAGL-----THLN 149
>gi|317180090|dbj|BAJ57876.1| hypothetical protein HPF32_0294 [Helicobacter pylori F32]
Length = 418
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|317177100|dbj|BAJ54889.1| hypothetical protein HPF16_0292 [Helicobacter pylori F16]
Length = 418
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|298484173|ref|ZP_07002339.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
gi|298269677|gb|EFI11272.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
Length = 436
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|294792210|ref|ZP_06757358.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
gi|294457440|gb|EFG25802.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
Length = 321
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70
Query: 157 LSHKRLQKVLKTLRY 171
++++L ++
Sbjct: 71 YP--HIEELLGRIKE 83
>gi|317132913|ref|YP_004092227.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
YUAN-3]
gi|315470892|gb|ADU27496.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
YUAN-3]
Length = 451
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 99 LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
LK+ C +C +C R ++ + AA + + G D
Sbjct: 152 LKIAEGCDNHCTYCIIPKLRGRYRSRPLDDLVREAEQLAARGVRELTLVAQDTTRYGTD- 210
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
L + L ++L+ I + +R P+ ++ ELI + K V Y+ +
Sbjct: 211 LSGGKRMLPELLRRFCRIDGLHWVRL----LYCYPEALDDELIDTIASEEKVVPYLDMPI 266
Query: 214 NHPYEFSEEAIAAISR 229
H S + A++R
Sbjct: 267 QH---VSPRVVRAMNR 279
>gi|282850584|ref|ZP_06259963.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
ATCC 17745]
gi|282580077|gb|EFB85481.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
ATCC 17745]
Length = 321
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L L C C +C E+ + +LS + L + V TGG+PL+
Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70
Query: 157 LSHKRLQKVLKTLRY 171
++++L ++
Sbjct: 71 YP--HIEELLGRIKE 83
>gi|261839141|gb|ACX98906.1| hypothetical protein HPKB_0296 [Helicobacter pylori 52]
Length = 418
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|261837731|gb|ACX97497.1| hypothetical protein KHP_0283 [Helicobacter pylori 51]
Length = 418
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221
>gi|170289997|ref|YP_001736813.1| radical SAM domain-containing protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174077|gb|ACB07130.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 329
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + C + C +C+ + + L ++ L S I + +TGG+
Sbjct: 7 PSWLIWMITASCNLNCPYCYSTHYL---RERPLGREEVMRLLRE-AASSGIKHIDYTGGE 62
Query: 154 PLILSHKRLQKVLKT 168
PL + ++L+
Sbjct: 63 PLTRRD--ISEILEE 75
>gi|91201841|emb|CAJ74901.1| similar to nirJ/moaA/ppqE family of cofactor synthesis proteins
[Candidatus Kuenenia stuttgartiensis]
Length = 359
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E +D + P G + ++ + + C + C+ C+ KG L S+DT
Sbjct: 3 EYVKDSLSKKGCRPFSGAI------VIWNITNNCNLTCKHCY--AYANQIKGKELGSEDT 54
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH 159
+ + ++ S + I +GG+PL+
Sbjct: 55 ISLIQQFKQ-SAVKLAILSGGEPLMRKD 81
>gi|298373887|ref|ZP_06983845.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
gi|298268255|gb|EFI09910.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
Length = 440
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 30/185 (16%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMV 118
+P KE I P+ +D N SPL I P RI + C + C+ CF
Sbjct: 83 VPTKESFCI-PDFYKD---KKNLSPLTEIS---PGRIDFVITKHCNLACKHCFEGASPKF 135
Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
G ++ + + I + + TGG+P + + ++L L +H + +
Sbjct: 136 GIREYGIDVFSRIFSEFDRI----NLKTLKITGGEPFTVPN--FDQILLELSK-RHFETI 188
Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IH-ANHPYEFSEEAIAAISRL 230
+ + I I+ L+ + I+ H + + RL
Sbjct: 189 ------VLTNGMLIKDRDIEILRLGDIHLGISLDGLDSETHDFTRGKGAFDVISRQLLRL 242
Query: 231 ANAGI 235
+AG+
Sbjct: 243 RDAGV 247
>gi|212696574|ref|ZP_03304702.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM
7454]
gi|212676430|gb|EEB36037.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM
7454]
Length = 474
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113
Q + ++ +L + ED + D S K + + Y +RI+L + C C +C
Sbjct: 48 QGLSHRDAFVLLSCQEED-LNDEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106
Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ LS + + +Q+ + TG DP+ + + + +KT+ IK
Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166
Query: 174 H 174
H
Sbjct: 167 H 167
>gi|157829079|ref|YP_001495321.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933804|ref|YP_001650593.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
rickettsii str. Iowa]
gi|229890634|sp|B0BVC7|MIAB_RICRO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890635|sp|A8GTT8|MIAB_RICRS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157801560|gb|ABV76813.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908891|gb|ABY73187.1| tRNA 2-methylthioadenosine synthase [Rickettsia rickettsii str.
Iowa]
Length = 445
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|167039016|ref|YP_001662001.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
gi|300913395|ref|ZP_07130712.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307723590|ref|YP_003903341.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
gi|166853256|gb|ABY91665.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
gi|300890080|gb|EFK85225.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
gi|307580651|gb|ADN54050.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
Length = 427
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--I 144
+GI P + C + C CF S K L+ TE +++ + I
Sbjct: 85 EGIQKIGPTIAYFHITQRCNLNCPTCF----TFSPKRNKLNDMPTEKVKEVLRKIKEFGI 140
Query: 145 WEVIFTGGDPLI 156
EVIF+GG+P +
Sbjct: 141 NEVIFSGGEPFL 152
>gi|37526620|ref|NP_929964.1| hypothetical protein plu2730 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786052|emb|CAE15104.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 354
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIW 145
G +YP+ + + C C+ C LS + + +A+ + +
Sbjct: 6 PGYWEQYPNTATVITTYTCNAACKECC--FECNPSVKARLSLDEIKQFIAHSKANFPGLK 63
Query: 146 EVIFTGGDPLILSHKRLQKV 165
V+F+GG+ +L ++ +
Sbjct: 64 LVVFSGGECFLLGKDLIEAI 83
>gi|1171709|sp|P24427|NIFB_RHILT RecName: Full=FeMo cofactor biosynthesis protein nifB
Length = 490
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 12/118 (10%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
H Y R+ L + C + C +C R+ G + + A+A E Q
Sbjct: 59 AHLYFARMHLAVASACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAIAVANEVPQ 118
Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQC 199
+ V G GD ++ + L + R I V++ + P+ + +L+
Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DDLVDM 172
>gi|21698998|dbj|BAC02731.1| moaA / nifB / pqqE family [Bacillus licheniformis]
Length = 385
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 20/180 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C + L+ K+ + + I ++ TG
Sbjct: 8 KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELTLKEGKDLIDQIHAMDNPL-LVLTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
GDPL + +++ + +R S P P + E IQ KE G +
Sbjct: 66 GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117
Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + + AI + + L +V+ D + +A L+
Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECHLPLQINTVISAYNIDYLDEMAKLIEEL 177
>gi|119384986|ref|YP_916042.1| molybdenum cofactor biosynthesis protein A [Paracoccus
denitrificans PD1222]
gi|166217887|sp|A1B4A2|MOAA_PARDP RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|119374753|gb|ABL70346.1| GTP cyclohydrolase subunit MoaA [Paracoccus denitrificans PD1222]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 37/178 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMQFLPKRDLLTLEELDRLCSAFVG-LGVRKLRVTGGEPLVRR 87
Query: 159 H---------KRLQKVLKTLRYIKHVQIL-RFHS-------RVPIVDPQRINPELIQCLK 201
+ + L L L + L RF + R V ++ + +
Sbjct: 88 NIMEFFRAMSRHLGAGLDELTLTTNGSQLARFATELADCGVRRVNVSLDTLDEDRFARIT 147
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
G+ + + I AG+ + +V LKG N+D L R
Sbjct: 148 RWGR--------------LPQVLQGIEAAKAAGMRVKINTVALKGFNED-----ELFR 186
>gi|332300071|ref|YP_004441992.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas
asaccharolytica DSM 20707]
gi|332177134|gb|AEE12824.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas
asaccharolytica DSM 20707]
Length = 341
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 38/193 (19%)
Query: 95 DRILLKLL--HVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
DR L + C + C FC M G Q G LS+ + + + E +++ ++F G
Sbjct: 100 DRATLCVSSQRGCKMNCLFC----MTGKQGFGANLSASEILNQILSVPEVNELTNIVFMG 155
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
G+P+ + +L+ +R + + + P+RI P L + L+E
Sbjct: 156 MGEPM----DNIDTLLQVIRCLTD-------PKGLAMSPKRITVSTIGLRPGLERFLEEC 204
Query: 204 GKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLS-----QSVLLK------GINDDP 251
+ I++H P E + + LA+ +L Q L G+ND P
Sbjct: 205 TCHLAISLHNPLPEERLAIMPVERAMPLADTVALLRHYDWSRQRRLTFEYIVFSGLNDTP 264
Query: 252 EILANLMRTFVEL 264
LA L R +L
Sbjct: 265 RHLAALKRLLSQL 277
>gi|293376256|ref|ZP_06622499.1| MiaB-like protein [Turicibacter sanguinis PC909]
gi|325845151|ref|ZP_08168460.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
gi|292645148|gb|EFF63215.1| MiaB-like protein [Turicibacter sanguinis PC909]
gi|325488816|gb|EGC91216.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
Length = 434
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 14/124 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQI----WEVI 148
R LK+ C +C +C G+ + + + ++
Sbjct: 142 RTRATLKIQDGCNNFCTYCIIPWARGTVRSQKP-EIVIDQVKQLVANGHCEVVLTGIHTA 200
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L K+L+ L I ++ +R S ++ + ++I +K + K +
Sbjct: 201 AYGED---LEDYSFGKLLQDLIKIDGLKRIRISS----IEASEMTDDVITAMKMSDK-IV 252
Query: 209 IAIH 212
+H
Sbjct: 253 NHLH 256
>gi|189485173|ref|YP_001956114.1| hypothetical protein TGRD_170 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|238055294|sp|B1GZH1|RIMO_UNCTG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|170287132|dbj|BAG13653.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 439
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 21/149 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
LK+ C C FC + G + + E+ + + ++ I E+I D
Sbjct: 147 AYLKIAEGCGHVCSFCIIPALRGRYESRTM-----ESLVDEVAALAESGIKELILIAQDT 201
Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
I L K+L L I ++ +R P I LI+ KE K Y
Sbjct: 202 TGYGKDIYGAFVLDKLLVKLSKINGLKWIRL----LYAYPSSITDGLIEVFKEHKKICSY 257
Query: 209 IAIHANHPYEFSEEAIAAISR-LANAGII 236
+ I H S+ ++A+ R L GII
Sbjct: 258 MDIPIQHA---SKNVLSAMKRPLNTPGII 283
>gi|167757163|ref|ZP_02429290.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402]
gi|167703338|gb|EDS17917.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402]
Length = 220
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 97 ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
H C + C +C R + +LS+++ L Y++ + V TGG+PL
Sbjct: 24 AAFIRFHYCNLNCSYCDTRYANDSNSNYELLSAQNI---LDYLKANKVVN-VTLTGGEPL 79
Query: 156 ILSHKRLQKVLKTLRY 171
+ + + ++ L
Sbjct: 80 LQQN--IDYLIDLLLK 93
>gi|24375413|ref|NP_719456.1| biotin synthase [Shewanella oneidensis MR-1]
gi|24350251|gb|AAN56900.1|AE015824_11 biotin synthase family protein [Shewanella oneidensis MR-1]
gi|301344403|gb|ADK73962.1| HydE [Shewanella oneidensis]
Length = 359
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ + C +C +C R LS+++ A+ I E V+ +G D
Sbjct: 62 RGIVEFSNHCRNHCHYCGLRTENRQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDD-F 120
Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
S R+ ++ ++ ++ I
Sbjct: 121 NYSGNRISTLITEIKRHHNLAI 142
>gi|17987302|ref|NP_539936.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. 16M]
gi|225852463|ref|YP_002732696.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
ATCC 23457]
gi|256044623|ref|ZP_05447527.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. Rev.1]
gi|256113501|ref|ZP_05454335.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
3 str. Ether]
gi|256264042|ref|ZP_05466574.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
2 str. 63/9]
gi|260563974|ref|ZP_05834460.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. 16M]
gi|265991048|ref|ZP_06103605.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. Rev.1]
gi|265994883|ref|ZP_06107440.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
3 str. Ether]
gi|24211991|sp|Q8YGY6|MOAA_BRUME RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|254811537|sp|C0RIT4|MOAA_BRUMB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|17982982|gb|AAL52200.1| molybdenum cofactor biosynthesis protein a [Brucella melitensis bv.
1 str. 16M]
gi|225640828|gb|ACO00742.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
ATCC 23457]
gi|260153990|gb|EEW89082.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. 16M]
gi|262765996|gb|EEZ11785.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
3 str. Ether]
gi|263001832|gb|EEZ14407.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
1 str. Rev.1]
gi|263094229|gb|EEZ18106.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
2 str. 63/9]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|326329949|ref|ZP_08196263.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae
bacterium Broad-1]
gi|325952157|gb|EGD44183.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae
bacterium Broad-1]
Length = 339
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 42/194 (21%)
Query: 83 HSPLKGIVHRYPDR-------ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDT 131
SP + R DR + + L C + C +C + G + VL+ +
Sbjct: 3 TSPTDQVQQRLVDRFGRVATDLRVSLTDRCNLRCTYCMPPEGLDWLPGDE---VLTDDEV 59
Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
+ + + EV FTGG+PL+ + L ++ R + L +
Sbjct: 60 VRLIGVATGQLGVREVRFTGGEPLV--RRGLVSIVARTREVAPDAELSITTNAL------ 111
Query: 192 INPELIQC---LKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI-----------I 236
L + L EAG V +++ + P F+E RL +
Sbjct: 112 ---GLARMAGSLAEAGLDRVNVSLDSIRPDTFAEITRR--DRLHDVVAGLEAAAEAGLGP 166
Query: 237 LLSQSVLLKGINDD 250
+ +VLL+G+NDD
Sbjct: 167 IKINAVLLRGVNDD 180
>gi|254693681|ref|ZP_05155509.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
str. Tulya]
gi|261213948|ref|ZP_05928229.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
str. Tulya]
gi|260915555|gb|EEX82416.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
str. Tulya]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|288940181|ref|YP_003442421.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
gi|288895553|gb|ADC61389.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
Length = 469
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 18/123 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R +K+ C C FC + G ++ L ++ E + S I EV+ TG
Sbjct: 161 RQRAFVKIQDGCRYQCTFCVTTQARGPERSRPLPEIVREVERF-----QDSGIREVVLTG 215
Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D L L +++ L + LR S P P+R
Sbjct: 216 VHLGGYGAD---LGTD-LTHLIERLLNETAIPRLRLGSLEPWDLPERFWSLFADRRLMPH 271
Query: 205 KPV 207
+
Sbjct: 272 LHL 274
>gi|228914502|ref|ZP_04078111.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844821|gb|EEM89863.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 383
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181
Query: 261 F 261
Sbjct: 182 L 182
>gi|225627438|ref|ZP_03785475.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str.
Cudo]
gi|254706840|ref|ZP_05168668.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M163/99/10]
gi|254710051|ref|ZP_05171862.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
B2/94]
gi|256031546|ref|ZP_05445160.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M292/94/1]
gi|256159681|ref|ZP_05457434.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M490/95/1]
gi|256254949|ref|ZP_05460485.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
gi|260168678|ref|ZP_05755489.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
gi|261222132|ref|ZP_05936413.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
gi|261314305|ref|ZP_05953502.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M163/99/10]
gi|261317598|ref|ZP_05956795.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
B2/94]
gi|261758152|ref|ZP_06001861.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
gi|265988632|ref|ZP_06101189.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M292/94/1]
gi|265998097|ref|ZP_06110654.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M490/95/1]
gi|225617443|gb|EEH14488.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str.
Cudo]
gi|260920716|gb|EEX87369.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
gi|261296821|gb|EEY00318.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
B2/94]
gi|261303331|gb|EEY06828.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M163/99/10]
gi|261738136|gb|EEY26132.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
gi|262552565|gb|EEZ08555.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M490/95/1]
gi|264660829|gb|EEZ31090.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
M292/94/1]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|294673381|ref|YP_003573997.1| MiaB family RNA modification enzyme [Prevotella ruminicola 23]
gi|294472539|gb|ADE81928.1| RNA modification enzyme, MiaB family [Prevotella ruminicola 23]
Length = 462
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + ++S +A A + +I GD
Sbjct: 170 RTRYFLKVQDGCDYFCTYCTIPYARGFSRNPTIASLVAQAQEAAAEGGKEIVLTGVNIGD 229
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
+ ++ ++K L ++ +Q R S ++P I+ ELI+ ++ H
Sbjct: 230 FGKTTGEKFIDLVKALDGVEGIQRYRISS----LEPDLISDELIEYCAKSR---AFMPHF 282
>gi|254714051|ref|ZP_05175862.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M644/93/1]
gi|254716892|ref|ZP_05178703.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
gi|261218696|ref|ZP_05932977.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
gi|261321806|ref|ZP_05961003.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M644/93/1]
gi|260923785|gb|EEX90353.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
gi|261294496|gb|EEX97992.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
M644/93/1]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|311233095|gb|ADP85949.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
Length = 393
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C + G + + A A I + +IFTGGDP++
Sbjct: 51 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 106
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR ++ P I PE Q +K +G +I +
Sbjct: 107 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 154
Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A I L +AGI + + + D+ ++ +
Sbjct: 155 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 211
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 212 IGAVAWHIFLLVPTGRAA 229
>gi|148264555|ref|YP_001231261.1| TatD family hydrolase [Geobacter uraniireducens Rf4]
gi|146398055|gb|ABQ26688.1| hydrolase, TatD family [Geobacter uraniireducens Rf4]
Length = 462
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWE 146
I +R + + L + + C C FC + E + +L + + +A I E
Sbjct: 269 IAYRIRNSLYLNITNRCSNRCSFCAKFEDFTVKGHYLLLDHEPDFSEVMAAIAAHKGYDE 328
Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
V+F G G+PL L +++V L+ +R ++
Sbjct: 329 VVFCGYGEPL-LRLDLIKEVAAALKKQGM--RIRINT 362
>gi|120603171|ref|YP_967571.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120563400|gb|ABM29144.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
Length = 405
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C + G + + A A I + +IFTGGDP++
Sbjct: 63 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 118
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR ++ P I PE Q +K +G +I +
Sbjct: 119 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 166
Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A I L +AGI + + + D+ ++ +
Sbjct: 167 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 223
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 224 IGAVAWHIFLLVPTGRAA 241
>gi|46579268|ref|YP_010076.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448682|gb|AAS95335.1| radical SAM domain protein [Desulfovibrio vulgaris str.
Hildenborough]
Length = 367
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C + G + + A A I + +IFTGGDP++
Sbjct: 25 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 80
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
+ L + LR ++ P I PE Q +K +G +I +
Sbjct: 81 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 128
Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
P S +A I L +AGI + + + D+ ++ +
Sbjct: 129 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 185
Query: 264 LRIKPYYLHHPDLAAGTS 281
+ +++ +
Sbjct: 186 IGAVAWHIFLLVPTGRAA 203
>gi|23501841|ref|NP_697968.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330]
gi|161618912|ref|YP_001592799.1| molybdenum cofactor biosynthesis protein A [Brucella canis ATCC
23365]
gi|163843226|ref|YP_001627630.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC
23445]
gi|254701716|ref|ZP_05163544.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
str. 513]
gi|254704258|ref|ZP_05166086.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
str. 686]
gi|256369383|ref|YP_003106891.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM
4915]
gi|261752267|ref|ZP_05995976.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
str. 513]
gi|261754926|ref|ZP_05998635.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
str. 686]
gi|38258159|sp|Q8G0X4|MOAA_BRUSU RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028683|sp|A9MAX5|MOAA_BRUC2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|189028684|sp|B0CLT0|MOAA_BRUSI RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|23347777|gb|AAN29883.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330]
gi|161335723|gb|ABX62028.1| Molybdenum cofactor biosynthesis protein A [Brucella canis ATCC
23365]
gi|163673949|gb|ABY38060.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC
23445]
gi|255999543|gb|ACU47942.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM
4915]
gi|261742020|gb|EEY29946.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
str. 513]
gi|261744679|gb|EEY32605.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
str. 686]
Length = 344
Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|237709718|ref|ZP_04540199.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA]
gi|229456354|gb|EEO62075.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA]
Length = 498
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
L + C +C++C + S T+ + I+E Q+ +V GG+ +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200
Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
++ +LK L R I +++P+ +L+Q ++E G V I++
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249
Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
A H + E + + L ++G+ SVL N +LA L+
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308
Query: 262 -----VELRIKP 268
+ RI P
Sbjct: 309 HLKHIRDWRIIP 320
>gi|254518526|ref|ZP_05130582.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
gi|226912275|gb|EEH97476.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
Length = 451
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
ED D H + Y + L ++H C + C++CF E + V+S + +
Sbjct: 75 YSEDKYEDIAHGSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYNGHKGVMSLETAK 132
Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRF 180
A+ Y+ ++S E+ GG+P + +++++K R + + +RF
Sbjct: 133 KAIDYVVKRSGPRRNIEIDLFGGEP-TMIMDTVKEIIKYARENEKEWKKNIRF 184
>gi|169831334|ref|YP_001717316.1| hypothetical protein Daud_1173 [Candidatus Desulforudis audaxviator
MP104C]
gi|169638178|gb|ACA59684.1| protein of unknown function DUF512 [Candidatus Desulforudis
audaxviator MP104C]
Length = 451
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEFSEEAIA-----AISRLANAGIILLSQSV 242
++ ++ + P+Y+++H +P A + L AGI + +Q V
Sbjct: 126 VDERDLRRIAGQRLSPLYVSVHTTNPALRRRLMGHPRAGGIMGQLRLLKAAGIEVHTQVV 185
Query: 243 LLKGIND------DPEILANLMRTFVELRIKP 268
L G+ND + LA L + + + P
Sbjct: 186 LCPGLNDGDELSRTVKDLATLWPSVQSVGVVP 217
>gi|170754837|ref|YP_001782699.1| radical SAM domain-containing protein [Clostridium botulinum B1
str. Okra]
gi|169120049|gb|ACA43885.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
Length = 455
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL
Sbjct: 99 LNIAHDCNLRCKYCFADEGEYKGKRELMSPEVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
+ ++++++ + + H + +RF
Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKTIRF 184
>gi|149174199|ref|ZP_01852827.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM
8797]
gi|148847179|gb|EDL61514.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM
8797]
Length = 333
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
+ + C + C +C E V + + S E + +I+ + ++ TGG+PL+
Sbjct: 20 ISVTDRCNIRCFYCMPSEDVQFVHRSKIMS--FEEIVRFIRLVVPLGVDKIRLTGGEPLV 77
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
K + +++K + I ++ + + + PQ+
Sbjct: 78 --RKNIPELVKMIADIPGIKDIGITTNGIL-LPQQ 109
>gi|256545277|ref|ZP_05472642.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC
51170]
gi|256399104|gb|EEU12716.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC
51170]
Length = 474
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 78 IGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
+ + S K + + Y +RI+L + C C +C + LS +
Sbjct: 66 LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCPYHAKNKTIPRRKLSQDEIR 125
Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ +Q+ + TG DP+ + + +KT+ IKH
Sbjct: 126 KEVIALQDLGHKRLALETGEDPVNNPIDYVLESIKTIYSIKH 167
>gi|255011267|ref|ZP_05283393.1| hypothetical protein Bfra3_19146 [Bacteroides fragilis 3_1_12]
gi|313149079|ref|ZP_07811272.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137846|gb|EFR55206.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 439
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASLVEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKSTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEYVSTSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|239946801|ref|ZP_04698554.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
of Ixodes scapularis]
gi|239921077|gb|EER21101.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
of Ixodes scapularis]
Length = 464
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 151 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 203
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 204 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 257
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 258 RYTTSHPI 265
>gi|189462612|ref|ZP_03011397.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
gi|189430773|gb|EDU99757.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
Length = 438
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C + + E A E++ TG
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGKIADLVEQARQ--VAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDAVEGIERYRISS----IEPNLLTDEIIEYVARSRR---FM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|196033604|ref|ZP_03101016.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W]
gi|218903027|ref|YP_002450861.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820]
gi|228926971|ref|ZP_04090037.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|195994038|gb|EDX57994.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W]
gi|218538427|gb|ACK90825.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820]
gi|228832706|gb|EEM78277.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 377
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|153810776|ref|ZP_01963444.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
gi|149833172|gb|EDM88254.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
Length = 445
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
LK+ C +C +C + G K + + Y+ + + E+I G
Sbjct: 148 LKIAEGCDKHCTYCIIPSLRG--KFRSVPEERLLKQAEYMASQ-GVRELILVAQETTVYG 204
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D + K L +LK L IK ++ +R V P+ I ELIQ +KE K
Sbjct: 205 TD--LYGKKTLHILLKKLCQIKGIRWIR----VLYCYPEEIYDELIQVMKEEKK 252
>gi|269926079|ref|YP_003322702.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
BAA-798]
gi|269789739|gb|ACZ41880.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
BAA-798]
Length = 432
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF------ 149
+ ++ C +C FC G ++ + D + ++ + EV
Sbjct: 136 TAFVPVIMGCNKFCTFCVVPYRRGRERSIPIP--DVVEEVRFL-ADRGVKEVTLLGQTIN 192
Query: 150 -TGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
G D L ++ L +L + + ++ +RF P+ + +++ + + K
Sbjct: 193 HYGKD---LPNRPDLADLLYAVHEVPGIERIRF----LTSYPRTMTDKILHAVADLPK-- 243
Query: 208 YIAIHANHPYEF-SEEAIAAISR 229
+ H N P++ + + A+ R
Sbjct: 244 -VCEHINIPFQAGDNDVLRAMRR 265
>gi|255693887|ref|ZP_05417562.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
gi|260620292|gb|EEX43163.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
Length = 434
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + + + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--DEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242
>gi|163782835|ref|ZP_02177831.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881956|gb|EDP75464.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1]
Length = 454
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRRE----MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
+++ + L + C ++C FC R MV E + YI + + E++F
Sbjct: 266 NKLYVNLTNKCNLHCVFCQRERERNFMVKGYWVWTTRDPSVEEVIRYIGDPTGYEEIVFC 325
Query: 151 G-GDPLILSHKRLQKV 165
G G+P L L+++
Sbjct: 326 GYGEP-TLRFSALKEI 340
>gi|219852013|ref|YP_002466445.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
gi|219546272|gb|ACL16722.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
Length = 377
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P + + +C CR+C + + + + + + + I + F+G
Sbjct: 23 KRPTYAYISITSLCNSRCRYCDSW---KNNGESEPDTDEWKKIIDEL-VNLGIVTLTFSG 78
Query: 152 GDPLILSH 159
G+P I
Sbjct: 79 GEPFIRKD 86
>gi|148560684|ref|YP_001258926.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC
25840]
gi|166217239|sp|A5VQC9|MOAA_BRUO2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|148371941|gb|ABQ61920.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC
25840]
Length = 344
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|332140865|ref|YP_004426603.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550887|gb|AEA97605.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
str. 'Deep ecotype']
Length = 322
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C++C G +S + + L + +V TGG+P L
Sbjct: 15 LSVTEACNFRCQYCLPDGYEGPSSDQFMSLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72
Query: 159 HKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
L + IK V + +R+ ++ + K+AG V ++I +
Sbjct: 73 RDFLDILHLTSNTPGIKRVAMTTHGARM-----EKFAHQW----KDAGLHQVNVSIDSLD 123
Query: 216 PYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
P +F+ + + +AG+ + SVLL +D L R L+
Sbjct: 124 PRQFAAITGQDKLKAVLRGLDSAIDAGLDVKVNSVLLNDFSDS-----RLHRFLAWLKDM 178
Query: 268 P 268
P
Sbjct: 179 P 179
>gi|187779452|ref|ZP_02995925.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
15579]
gi|187773077|gb|EDU36879.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
15579]
Length = 292
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I ++ FTGG+PLIL + K++ I ++ + + + + ++ LK+A
Sbjct: 32 IDKIRFTGGEPLILKD--IDKLIYNTSKISSIKDIAMTTNA------TLLEDRVEDLKKA 83
Query: 204 GKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
G + I + E + + +I + + GI + +V++KGINDD
Sbjct: 84 GLK-RVNISLDSLKEDRFKSITRGGDINKVFKSIEKSLSIGIRPIKINTVIMKGINDD 140
>gi|197116415|ref|YP_002136842.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197085775|gb|ACH37046.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
Length = 358
Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 42/221 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P I + C + C C E+ S+ S+++ + L I + S+ V+ +GG
Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
+PL+ L + +L R+ + + E+ + +K+A K V +
Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112
Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +H N P F AA G L S K + +A+ +
Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIASTFK 168
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G+ I++ L K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199
>gi|298674451|ref|YP_003726201.1| radical SAM domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298287439|gb|ADI73405.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303]
Length = 405
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 36/162 (22%)
Query: 92 RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148
+Y P+ + ++ C C C G + + + + AL + +
Sbjct: 102 KYIPETVSFEITRECKCNCEHCVVS---GGEGDLDVDTIKRTIDEALD-----MGAFIIT 153
Query: 149 FTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
FT GDPL+ + + +++ + R I V I + + PE + LKE+G
Sbjct: 154 FTEGDPLL--REEIFELIDYVDKDRAI--VNIFTPGTEL--------TPETAKRLKESGL 201
Query: 206 PVYIAIHANHPYEFSEEAIA----------AISRLANAGIIL 237
+ + E + AI +AG+++
Sbjct: 202 HNLLISIYSTDSEKHDSVRRLDGAHEMALNAIKNAVDAGLLV 243
>gi|171186368|ref|YP_001795287.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
V24Sta]
gi|170935580|gb|ACB40841.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
Length = 347
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 33/185 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQI 144
G+V R + + ++ VC + C FC S+ + EA LA ++E +
Sbjct: 22 GVVDRGTNVLEVRPTSVCALSCVFCSVNAGPASRARWAEYEVEVEALLAALEEVVRYKGV 81
Query: 145 WEV---IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+V + GDP L ++++ + IK V ++ +R+ ++ ++ L
Sbjct: 82 DDVEVHVDGMGDPGNYP--HLAELIEGAKSIKGVALVSMQTRL-----YMLDERKLEELA 134
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+AG A RLA A D E + L+
Sbjct: 135 KAGLDRINV-------SIDALDRALAKRLAGAEWY-------------DVEKVLRLVEAA 174
Query: 262 VELRI 266
+ I
Sbjct: 175 LGAGI 179
>gi|220929087|ref|YP_002505996.1| radical SAM protein [Clostridium cellulolyticum H10]
gi|219999415|gb|ACL76016.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
Length = 438
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
RQ I + ++ + +D + + + + P + ++ C + C C+
Sbjct: 69 FRQMISKVKDWDTAESLWKDSSDNKEIASIPALSA--PLDLSWEVTKRCNLNCHHCYNDS 126
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
+ + + + + + + ++ ++ TGG+PL+ L+ ++ LR
Sbjct: 127 HAINYEPNL---EQIHSVVNELSST-RLRNIVVTGGEPLMRED--LKTIIGWLR 174
>gi|308063147|gb|ADO05034.1| hypothetical protein HPSAT_01425 [Helicobacter pylori Sat464]
Length = 418
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221
>gi|241068677|ref|XP_002408506.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492494|gb|EEC02135.1| conserved hypothetical protein [Ixodes scapularis]
Length = 446
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 240 RYTTSHPI 247
>gi|206896314|ref|YP_002246510.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
5265]
gi|206738931|gb|ACI18009.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
5265]
Length = 348
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ + C C +C R ++ ++ I + V+ +G DP
Sbjct: 53 RGIIEFSNYCSSNCLYCGIRAQNKHVHRYRMTPQEIVDRAQIISAQGIKTVVLQSGEDPF 112
Query: 156 ILSHKRLQKVLKTLRYI 172
+ L ++ ++ +
Sbjct: 113 YTK-ETLGDIISAIQSL 128
>gi|15678091|ref|NP_275205.1| molybdenum cofactor biosynthesis A (MoaA) related protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621099|gb|AAB84569.1| molybdenum cofactor biosynthesis A (MoaA) related protein
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 250
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
I+ L C CR+CF S + I++++ + V+ GG+P
Sbjct: 37 IITVLTPTCNFRCRYCF----FKPSGCMNHSPDRIADLIQRIRDETGVERVLIAGGEP-T 91
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183
L + L ++ + L HV I +R
Sbjct: 92 LQ-EDLPELTEILAGDFHVTISPNGTR 117
>gi|15611340|ref|NP_222991.1| hypothetical protein jhp0270 [Helicobacter pylori J99]
gi|11387381|sp|Q9ZMF0|Y285_HELPJ RecName: Full=Putative methylthiotransferase jhp_0270
gi|4154794|gb|AAD05851.1| putative [Helicobacter pylori J99]
Length = 418
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221
>gi|284048720|ref|YP_003399059.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952941|gb|ADB47744.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
Length = 332
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 10/110 (9%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ CP C FC +R + G ++ + + E L +++ E+ F GG
Sbjct: 5 IFIPHAGCPHLCSFCNQRTISGEGDSSLAGARRQMENLLGWVRPDPA-NELAFYGGSFTA 63
Query: 157 LSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEA 203
L R + +L + + LR +R P I PE++ L+
Sbjct: 64 LDPDRQEALLDLAETWRGQGLCGPLRLSTR-----PDAITPEILDRLRAH 108
>gi|224543515|ref|ZP_03684054.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM
15897]
gi|224523642|gb|EEF92747.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM
15897]
Length = 439
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 22/114 (19%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
EL L R + N+ SP Y ++ C C +CF +K
Sbjct: 65 DVNELTFLESLRMRTLASNDDSP-----SYY----IICPTTGCNARCYYCF-------EK 108
Query: 123 GTVLSSKDTEAA---LAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRY 171
G V + + A YI + ++ GG+PL L K + +++ L
Sbjct: 109 GAVQKRMNLDTARAVAEYIFQNHDPEHLVIQWFGGEPL-LEPKTISYIVEYLSS 161
>gi|303243581|ref|ZP_07329923.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
gi|302486142|gb|EFL49064.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
Length = 466
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ + + C + C+ C+ G L++++ + I S + + F+GG+PL+
Sbjct: 115 VVWDVTYACNLRCKHCY--ANAGKPLEDELNTEEALKTID-ILANSGVVAIAFSGGEPLM 171
Query: 157 LSHKRLQKVLKTLRY 171
L +++ +
Sbjct: 172 RKD--LFELIDRAKD 184
>gi|295084184|emb|CBK65707.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
xylanisolvens XB1A]
Length = 436
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|300087902|ref|YP_003758424.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527635|gb|ADJ26103.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 329
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C + + +LS ++ ++ + + + + TGG+PL+
Sbjct: 23 ISVTDRCNLRCMYCSGASVDHLRHNDILSYEEIAQ-ISRVAAELGVNHIRLTGGEPLV-- 79
Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
L +++ L I ++ + +
Sbjct: 80 RPGLSNLIELLTAIPGIEDISLTT 103
>gi|269837050|ref|YP_003319278.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
DSM 20745]
gi|269786313|gb|ACZ38456.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
DSM 20745]
Length = 460
Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 18/141 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIW----EVIF 149
+ +++ C C +C G ++ ++ + E + ++ V
Sbjct: 159 TAFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAEVERLAE--RGVKEVTLLGQTVNA 216
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D L S L +L + I ++ +RF + P RI + K
Sbjct: 217 YGHD-LPGSPD-LADLLTAVNEIPGIERIRFLTSHPKYMSDRIVQAVATLPKACE----- 269
Query: 210 AIHANHPYEF-SEEAIAAISR 229
H N P + +E + + R
Sbjct: 270 --HINLPVQAGDDEVLRRMRR 288
>gi|313885881|ref|ZP_07819621.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924636|gb|EFR35405.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 157
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C +C C + GT L+ + + I + + +GGDP+ + L
Sbjct: 25 GCSHHCPGCHNPDSHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDPMFCPEELLT 84
Query: 164 KVLKTLRY 171
+LK L+
Sbjct: 85 -LLKRLKS 91
>gi|258648137|ref|ZP_05735606.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259]
gi|260852018|gb|EEX71887.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259]
Length = 72
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGHEIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRIVFR 70
>gi|150020569|ref|YP_001305923.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
gi|149793090|gb|ABR30538.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
Length = 429
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 20/128 (15%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C C +C R +G + SK E ++ I E++ TG
Sbjct: 136 RTRAFIKVQDGCTNVCSYCTIRY----ARGMRIRSKPIELVVSEILRMVNKDYKEIVITG 191
Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L L L +LK + IK +R S ++P+ IN ELI+ + K
Sbjct: 192 ---LNLGKYGKDKETSLLNLLKNVVKIKGDFRIRLSS----INPEDINDELIKFIVNEEK 244
Query: 206 PVYIAIHA 213
V +H
Sbjct: 245 -VCNHLHV 251
>gi|91204926|ref|YP_537281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
RML369-C]
gi|122426084|sp|Q1RKC2|MIAB_RICBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|91068470|gb|ABE04192.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
RML369-C]
Length = 446
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 34/141 (24%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +++ +G ++L S + L +++ L I +++ L
Sbjct: 186 VYR------EALKIVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239
Query: 179 RFHSRVPIVDPQRINPELIQC 199
R+ + PI + +LI
Sbjct: 240 RYTTSHPID----MTDDLISL 256
>gi|265767377|ref|ZP_06095043.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263252682|gb|EEZ24194.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 415
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 97 ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++L C + CR+C +++V ++ LS + L ++ + + F GG+
Sbjct: 130 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 188
Query: 154 PLILSHKRLQKVLKTL 169
+LS+ L ++L L
Sbjct: 189 --VLSYPFLDELLNEL 202
>gi|239993006|ref|ZP_04713530.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
ATCC 27126]
Length = 322
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 26/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C++C G ++ + + L + +V TGG+P L
Sbjct: 15 LSVTEACNFRCQYCLPDGYEGPTSDQFMTLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72
Query: 159 HKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
L + L I+ V + +R+ ++ + KEAG V ++I +
Sbjct: 73 RDFLD--ILRLTSNTPGIERVAMTTHGARM-----EKFAHQW----KEAGLHQVNVSIDS 121
Query: 214 NHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD 250
P +F+ + + +AG+ + SVLL +D
Sbjct: 122 LDPRQFAAITGQDKLKAVLRGLDAAIDAGLDVKVNSVLLNDFSDS 166
>gi|95928217|ref|ZP_01310965.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95135488|gb|EAT17139.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 369
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 40/217 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
P I + C + C C S TE A I + ++ + ++ +G
Sbjct: 10 PKWIAWETTRRCNLTCVHC----RCSSDMEAASGDFTTEEAFKMIDDICEVSKPVMVLSG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
G+PL+ + + + LR + I E+ + +A K V ++
Sbjct: 66 GEPLMRPD------IFEIAEYGTSKGLRMC---MATNGTLITDEVCAKMNKADIKMVSLS 116
Query: 211 IHANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
+ + E ++ A L GI L S K + +AN +
Sbjct: 117 LDGSTA-EIHDDFRQCPGAFEGVKRAAETLTRNGIKFLINSSFTK---RNQHDIANTFKL 172
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
L +Y+ + G++I+ L
Sbjct: 173 AKSLGATAWYMFM----------IVPTGRGEEIMNEL 199
>gi|60683617|ref|YP_213761.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343]
gi|60495051|emb|CAH09869.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343]
Length = 416
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 97 ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ ++L C + CR+C +++V ++ LS + L ++ + + F GG+
Sbjct: 131 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 189
Query: 154 PLILSHKRLQKVLKTL 169
+LS+ L ++L L
Sbjct: 190 --VLSYPFLDELLNEL 203
>gi|327399314|ref|YP_004340183.1| 30S ribosomal protein S12 methylthiotransferase rimO [Hippea
maritima DSM 10411]
gi|327181943|gb|AEA34124.1| Ribosomal protein S12 methylthiotransferase rimO [Hippea maritima
DSM 10411]
Length = 429
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGD--- 153
LK+ C C FC S+ + + + + E+ T D
Sbjct: 137 LKIADGCSNRCTFC-----AIPLIKGGFKSRGIDELVEEAEVLADKGVRELYITAQDTTA 191
Query: 154 PLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
+ +++ L ++LK L I+ + +R P + ELI+ + A + V YI
Sbjct: 192 YMFEKNRKNALVELLKKLDEIEGLSWVRL----MYTYPSYVTDELIEFMSTARRIVRYID 247
Query: 211 IHANHP 216
+ H
Sbjct: 248 MPFQHA 253
>gi|256028544|ref|ZP_05442378.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Fusobacterium sp. D11]
gi|289766463|ref|ZP_06525841.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Fusobacterium sp. D11]
gi|289718018|gb|EFD82030.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Fusobacterium sp. D11]
Length = 112
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
R+ L + C C+ CF E G + K+ + Y ++ I + GGDP
Sbjct: 18 RVSLFVSG-CTHCCKNCFNEETWDENYGKKFTEKEENEIIEYFKKYGKTIKGLSLLGGDP 76
Query: 155 LILSH-KRLQKVLKTLRYIKHVQI 177
+ K L K +K L+ I ++I
Sbjct: 77 TYPKNIKPLLKFIKNLKRIYQIEI 100
>gi|157377532|ref|YP_001476132.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
gi|157319906|gb|ABV39004.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
HAW-EB3]
Length = 326
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + VC C +C + L+ + E +A E ++ TGG+P +
Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPDGRSKFLALSEIENLVAAFSE-VGTQKIRITGGEPTLRK 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
+++ + + +I + + R+ + + + +++ + P
Sbjct: 76 D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128
Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
+ + E + I AG + +VLLKG ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALEAGFERVKINAVLLKGFND 168
>gi|94267016|ref|ZP_01290661.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93452290|gb|EAT02931.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 909
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142
P IVH DR+ L++ C CRFC ++ ++ ALA+I++
Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199
++ + + GD + ++ L +++ L K + +R + + E+++
Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355
Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235
++ K + + EA + R+ N GI
Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383
>gi|294338108|emb|CBJ93946.1| hypothetical phage protein (Radical SAM family) [Campylobacter
phage CP220]
Length = 306
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 16/137 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154
R + + C C +C S+ ++ ++ + GG+P
Sbjct: 27 RAAIMTTNKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 86
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L L + +K V IL + + LKE + +
Sbjct: 87 LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 133
Query: 215 HPYEFSEEAIAAISRLA 231
H + + + I RL
Sbjct: 134 HASQIN--SNQYIERLK 148
>gi|238018952|ref|ZP_04599378.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
gi|237864436|gb|EEP65726.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
Length = 472
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+L + C C +C K L+ + ++ VI
Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQNQIREEVIALEAMGHKRIVI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
+G DPL L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160
>gi|229007366|ref|ZP_04164964.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
gi|228753897|gb|EEM03337.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
Length = 364
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
PL+ + L + LR S P P + E IQ K G +
Sbjct: 65 PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116
Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
A H + + +AI ++ L I + + + K + E +A L+
Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173
Query: 261 F 261
Sbjct: 174 L 174
>gi|212550430|ref|YP_002308747.1| translation initiation factor IF-1 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548668|dbj|BAG83336.1| translation initiation factor IF-1 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 72
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGHEIE----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRISFR 70
>gi|146282217|ref|YP_001172370.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri
A1501]
gi|145570422|gb|ABP79528.1| molybdopterin biosynthetic protein A2 [Pseudomonas stutzeri A1501]
Length = 331
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 29/167 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C +MV + + +L+ ++ A + + TGG+PL+
Sbjct: 19 LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75
Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
K L +L L ++ L S++P L L EAG + I +
Sbjct: 76 RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLHEAGVR-RLNISLDS 125
Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
E + ++ + I +AG I L+ SV+ KG NDD
Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171
>gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
sonnei Ss046]
gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
boydii Sb227]
gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC
74-1112]
gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G]
gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74]
Length = 474
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC +C G + S D +A + + + EV G +
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
S +L+ + I + +RF + P I++ R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
++G + H + E A I +L A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296
>gi|327438744|dbj|BAK15109.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
Length = 500
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 17/163 (10%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136
I + + + + + + + CP C +C F + S + K +
Sbjct: 156 IVERQLTVIPDLDELGKEISIYIGVPFCPTMCAYCTFPAYAIQSNRKAGRVEKFIDGLHI 215
Query: 137 YIQE--------KSQIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV 187
++E +I + + GG P + + + KT+ + + +R + V
Sbjct: 216 ELREMGKWLTEKNMRITSIYWGGGTPTSIEAHEMDALYKTMFDAFPNPESIREIT-VEAG 274
Query: 188 DPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
P I PE I+ LK+ G + + P +++E + AI R
Sbjct: 275 RPDTITPEKIEVLKKWGIDRISVN-----PQSYTQETLKAIGR 312
>gi|323135945|ref|ZP_08071028.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC
49242]
gi|322399036|gb|EFY01555.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC
49242]
Length = 346
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 33/172 (19%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C C +C M + +L+ ++ + + + + TGG+PL+
Sbjct: 28 VRVSVTDRCDFRCVYCMSEHMTFLPRRDLLTLEELDRLCSAFVARGTKR-LRITGGEPLV 86
Query: 157 ----------LSHKRLQKVLKTLRYIKHVQIL-RFHSRV-------PIVDPQRINPELIQ 198
LS L+ L + L RF S + V ++P +
Sbjct: 87 RHDVMTLFRALSRHLASGALEELTLTTNGSQLARFASELVDCGVKRVNVSLDTLDPGRFR 146
Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
L G +H +A + AG+ + +V LKG+N+D
Sbjct: 147 ALTRTG---------DHAR-----VMAGVDAALAAGLRVKLNAVALKGVNED 184
>gi|291166122|gb|EFE28168.1| Fe-S oxidoreductase [Filifactor alocis ATCC 35896]
Length = 424
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R +K+ C +C +C + + S+ E + +++ + EV+ TG
Sbjct: 135 HTRAFVKIQDGCDRFCTYC-----IIPFTRGPVRSRSLENIVYEVKKLVNNGYKEVVLTG 189
Query: 152 GDPLIL----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ L V++ L I ++ +R S V+P I + ++ + +
Sbjct: 190 IHVASYGKDTKKETLIDVIERLSTIDGLERIRTSS----VEPIIITEDFLKRVSQ 240
>gi|260221009|emb|CBA29146.1| Molybdenum cofactor biosynthesis protein A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 385
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ + ++ TGG+
Sbjct: 51 ISVTDRCNFRCSYCMPKEVFHKDYPYLPHSALLSFEEITTLAKQFVA-LGVQKIRLTGGE 109
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++ +++ L I
Sbjct: 110 PLL--RKNIETLIEQLAAI 126
>gi|269122177|ref|YP_003310354.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Sebaldella termitidis ATCC 33386]
gi|268616055|gb|ACZ10423.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Sebaldella termitidis ATCC 33386]
Length = 163
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C C E G V+ SK + I + + +GGDP S + L
Sbjct: 24 SGCSHACPGCHNEESWNPDNGEVMDSKYFKKITDEINGNKMLSGITISGGDPFYDSEEFL 83
Query: 163 QKVLK 167
+++
Sbjct: 84 DFLVR 88
>gi|256393258|ref|YP_003114822.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
44928]
gi|256359484|gb|ACU72981.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
44928]
Length = 1588
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
DP + S L +TLR ++LR H+ + P EL+ L E + + + +
Sbjct: 1385 ADPALHSIPILAHHNRTLRS-DQERLLRAHAEL---YP----LELLPSLDELRERIVLHL 1436
Query: 212 HANHPYEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANL--MRTFVELRI 266
A HP + + L ++G +L +SVL+ I+DD L L M +R+
Sbjct: 1437 GAEHPDDVVPLPQPGRERPAELPDSGGLLAGRSVLV--IDDDARNLFALTGMLEMHGMRV 1494
Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
+ D G + ++ + ++ G I +P
Sbjct: 1495 ----VDAEDGVKGIQALQNDPRIEVILMDVMMPEMDGYEATARIRTMP 1538
>gi|296125375|ref|YP_003632627.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
gi|296017191|gb|ADG70428.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
Length = 265
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQ--IWEVIFTGG 152
+ + C + C +C ++G + S + E + ++E S+ I +V TGG
Sbjct: 14 VSVTDRCNLRCVYCM------PEEGIIKKSHNEILTFEQIYSIVKEASELGIKKVRITGG 67
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+PL+ K +++++ +R I+ V+I+ + ++ L + LK AG
Sbjct: 68 EPLV--RKNIEELVSMIRSIEKVEIIAMTTNAVLLY------SLAEKLKNAGL 112
>gi|254432004|ref|ZP_05045707.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
7001]
gi|197626457|gb|EDY39016.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
7001]
Length = 467
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 23/156 (14%)
Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
RY LK+ C C FC + G Q+ + + A + + V
Sbjct: 144 RYRTTSEAVAYLKVAEGCDYRCAFCIIPRLRGDQRSRPI--ESIVAEARQLAAQGVKELV 201
Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ + G D + RL ++L+ L ++ + +R H P PE++ +
Sbjct: 202 LISQITTNYGLD--LYGKPRLAELLRALAEVE-IPWIRVHYAYPTGL----TPEVLAAYR 254
Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGII 236
E V Y+ + H + + + A++R A +
Sbjct: 255 EVPNVVPYLDLPLQHSH---PDVLRAMNRPWQANVT 287
>gi|169824874|ref|YP_001692485.1| anaerobic ribonucleoside-triphosphate reductase activator
[Finegoldia magna ATCC 29328]
gi|302379664|ref|ZP_07268149.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Finegoldia magna ACS-171-V-Col3]
gi|167831679|dbj|BAG08595.1| anaerobic ribonucleoside-triphosphate reductase activator
[Finegoldia magna ATCC 29328]
gi|302312571|gb|EFK94567.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Finegoldia magna ACS-171-V-Col3]
Length = 166
Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R + C + C+ CF +E G + T + Y+ + +I + GG+P
Sbjct: 18 RCTFFVTG-CSLNCKNCFNKEYQDPNFGDKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75
Query: 156 ILSHKRLQKVLKTLRY 171
L +++ +R
Sbjct: 76 ESCDD-LIEIVGKIRE 90
>gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83]
Length = 474
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC +C G + S D +A + + + EV G +
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
S +L+ + I + +RF + P I++ R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
++G + H + E A I +L A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296
>gi|322419474|ref|YP_004198697.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
gi|320125861|gb|ADW13421.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
Length = 326
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 93/256 (36%), Gaps = 63/256 (24%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + V +LS ++ A + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNLRCSYCMPEDGVEKLSHCEMLSYEELLRISAE-AVAAGIEKIRITGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
K + L L + ++ L + + E+ Q LK+AG + I++
Sbjct: 74 -RKGILDFLSRLAVLPGLKELVLTTNGL------LLKEMAQGLKDAGVQRLNISL----- 121
Query: 217 YEFSEEAIAAISR---LAN---------------AGIILLSQSVLLKGINDDPEILANLM 258
E A I+R L I + V+++G+NDD + + +
Sbjct: 122 DSLKPETFAKITRGGDLQRVLDGIDEAERVGFPPHKINV----VVMRGVNDD--EMLDFV 175
Query: 259 RTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQK-------IVASLKEKIS 302
++ +PY Y+ G + + + E ++ I + + S
Sbjct: 176 ELTLK---RPYAVRFIEYM----PTCGDADWHDLCVPGAEIRERIARKYTIEETANTERS 228
Query: 303 GLCQPFYILDLPGGYG 318
G + F + PG G
Sbjct: 229 GPSKNFRVQGAPGSLG 244
>gi|126178826|ref|YP_001046791.1| radical SAM domain-containing protein [Methanoculleus marisnigri
JR1]
gi|125861620|gb|ABN56809.1| Radical SAM domain protein [Methanoculleus marisnigri JR1]
Length = 398
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C + C C+ R G + L++++ A + + E ++ ++F+GG+PL+
Sbjct: 41 VFWNITNRCNLLCSHCYIRAGPGRGREDELTTEEGLALIDDLAEM-RVPLLLFSGGEPLV 99
>gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
boydii CDC 3083-94]
gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC
3083-94]
Length = 474
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ ++ C YC +C G + S D +A + + + EV G +
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
S +L+ + I + +RF + P I++ R PEL+ L
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264
Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
++G + H + E A I +L A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296
>gi|317490251|ref|ZP_07948739.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|325833449|ref|ZP_08165898.1| radical SAM domain protein [Eggerthella sp. HGA1]
gi|316910745|gb|EFV32366.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|325485373|gb|EGC87842.1| radical SAM domain protein [Eggerthella sp. HGA1]
Length = 415
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 36/185 (19%)
Query: 96 RIL---LKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
R+L L + C + C C+ R + D + A+ + + + ++
Sbjct: 75 RVLSAYLHVTQRCNLACAGCYSLDEHRNRL------ADAPLADMKRAVEGLAA-AGLSQL 127
Query: 148 IFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--- 203
I +GG+PL+ + + K I V +L + R+ E ++ L
Sbjct: 128 IISGGEPLLREDLPDIVEHAKRACGIASVTVLSNGT--------RMTEEALERLAPNVDC 179
Query: 204 ------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILAN 256
G + F E + A+ + AGI + +V K + DD
Sbjct: 180 VSVSFDGCSAAAPAYIRSEQRFD-ELVEAVRMVQRAGIPAHIIPTVHAKNV-DDLASYVQ 237
Query: 257 LMRTF 261
L R
Sbjct: 238 LSRDL 242
>gi|291515240|emb|CBK64450.1| SSU ribosomal protein S12P methylthiotransferase [Alistipes shahii
WAL 8301]
Length = 432
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 71/200 (35%), Gaps = 39/200 (19%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVG------SQKGTVLSSKDTEAALAYIQEKSQIWE 146
LK+ C C +C R V ++ L+ + + I + + +
Sbjct: 136 AYLKISEGCNWKCGYCAIPLIRGAHVSVPMEELEEEARKLAGQGVRELMV-IAQDTTYYG 194
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ G + L ++L+ L I ++ +R H P P E+I+ + K
Sbjct: 195 IDLYGR-------RMLAELLRRLCRIDGIEWIRLHYAYPAGFP----DEVIEAMASEPKI 243
Query: 207 V-YIAI---HAN-------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG----INDDP 251
Y+ I H + H EA+ I RL A L ++ LL G D
Sbjct: 244 CKYLDIPFQHISDAQLASMHRRHTKAEAMELIGRLRGAIPDLALRTTLLVGYPGETEADF 303
Query: 252 EILANLMR--TFVELRIKPY 269
E L +R F L + PY
Sbjct: 304 EELLAFVREVRFERLGVFPY 323
>gi|289193018|ref|YP_003458959.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
gi|288939468|gb|ADC70223.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
Length = 467
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
++ + + C + C+ C+ G L++++ + + I + + + F+GG+PL+
Sbjct: 115 VVWDVTYRCNLRCKHCY--ANAGKPLEDELNTEEAKKVVD-ILGNAGVVALAFSGGEPLM 171
Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L +++ ++ V I + + E ++ LKE
Sbjct: 172 RKD--LFELIDRVKDYDMQVSIATNGT--------LLTKENVRKLKEHN 210
>gi|228999813|ref|ZP_04159385.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
gi|228759755|gb|EEM08729.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
Length = 364
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD
Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
PL+ + L + LR S P P + E IQ K G +
Sbjct: 65 PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116
Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
A H + + +AI ++ L I + + + K + E +A L+
Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173
Query: 261 F 261
Sbjct: 174 L 174
>gi|76801423|ref|YP_326431.1| molybdopterin-based tungsten cofactor biosynthesis protein 1
[Natronomonas pharaonis DSM 2160]
gi|76557288|emb|CAI48864.1| molybdopterin-based tungsten cofactor biosynthesis protein 1
[Natronomonas pharaonis DSM 2160]
Length = 371
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 23/120 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C L++ + + L E V+ +GGD
Sbjct: 19 PFVLIWEVTQACELACDHCRADAKPSRHPDE-LTTAEGKRLLDSAAEFGDGQLVVLSGGD 77
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKP 206
P + L V+++R+ ++ P + + P+ I L +AG
Sbjct: 78 P--MKRDDL------------VELVRYGTKQGLRMTLTPSGT-EALTPDNIAALVDAGLQ 122
>gi|300692273|ref|YP_003753268.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
gi|299079333|emb|CBM10239.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
PSI07]
Length = 341
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C +M + +LS +D + A A+I+ + ++ TGG+PL+
Sbjct: 22 LSVTDRCNLRCVYCMSEDMTFHARPDLLSMEDFDRIARAFIRR--GVRKLRITGGEPLVR 79
Query: 158 SH 159
Sbjct: 80 KD 81
>gi|296269899|ref|YP_003652531.1| membrane protein [Thermobispora bispora DSM 43833]
gi|296092686|gb|ADG88638.1| Membrane protein involved in the export of O- antigen and teichoic
acid-like protein [Thermobispora bispora DSM 43833]
Length = 1197
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 176 QILRFHSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
++ R +R+ V P R+ L+ L G +Y+ P E + + ++ L
Sbjct: 474 RVTRLGTRMLAVMPHPDRVKRWLLPILSAQGLAIYLIALLAPPGELAGVDVERMNGL 530
>gi|281422230|ref|ZP_06253229.1| translation initiation factor IF-1 [Prevotella copri DSM 18205]
gi|281403735|gb|EFB34415.1| translation initiation factor IF-1 [Prevotella copri DSM 18205]
Length = 72
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G I ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|167465181|ref|ZP_02330270.1| hypothetical protein Plarl_21911 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322384550|ref|ZP_08058230.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321150605|gb|EFX44082.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 367
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
L +VC +C FC R +G + S + +++I E + E TGG
Sbjct: 66 LYFTNVCEAHCAFCHFRRNLGEEGAYTYSP---DEMISHIHEHFHPGMREFHITGG 118
>gi|160903010|ref|YP_001568591.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
gi|160360654|gb|ABX32268.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
Length = 474
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIF 149
P+ ++ + +C + C C+ + G G L++++ A+ I S + +
Sbjct: 6 PETLIWDVTQLCNLSCIHCYNNDRYGKNNIYHSGKDLTTEEARNAIEKI-ANSGVKHIHL 64
Query: 150 TGGDPLILSH 159
GG+P
Sbjct: 65 LGGEPFCRKD 74
>gi|197117742|ref|YP_002138169.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087102|gb|ACH38373.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
Length = 326
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C + V + +LS ++ + I ++ TGG+PL+
Sbjct: 16 LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
K + L+ L + ++ L + E+ Q LK AG + I++
Sbjct: 74 -RKGIVPFLERLARVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121
Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250
E A I+R L AG L V+++G+NDD
Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169
>gi|238794064|ref|ZP_04637681.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
ATCC 29909]
gi|238726569|gb|EEQ18106.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
ATCC 29909]
Length = 326
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + ++ TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ T+R ++ L + R+ + Q +EAG I + + P
Sbjct: 76 D--FSDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
+F + + I +AG + +VL++ +ND
Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR 169
>gi|317485155|ref|ZP_07944037.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
gi|316923690|gb|EFV44894.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
Length = 472
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C L+ +D + +Q+ I
Sbjct: 80 YGNRIVMFAPLYLSNYCINSCSYCPYHAKNKHIARKKLTQEDIVREVTALQDMGHKRLAI 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS-RVPIVDPQRINPELIQCLKEAGKPV 207
+G DPL + + + ++T+ +KH R S R V+ E + LK+AG
Sbjct: 140 ESGEDPLNNPIEYILESIRTIYSVKH----RNGSIRRVNVNIAATTVENYRKLKDAGIGT 195
Query: 208 YI 209
YI
Sbjct: 196 YI 197
>gi|254561814|ref|YP_003068909.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
gi|254269092|emb|CAX25055.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
Length = 344
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 39/173 (22%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88
Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + + L H++ S++ R PEL + L V +
Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138
Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
+ AI+R GI + +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAEGIKVKINAVALKGVNED 184
>gi|288942386|ref|YP_003444626.1| MiaB family RNA modification enzyme [Allochromatium vinosum DSM
180]
gi|288897758|gb|ADC63594.1| RNA modification enzyme, MiaB family [Allochromatium vinosum DSM
180]
Length = 441
Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
+ ++ C YC +C V S+ + +A + + ++ + E+ G +
Sbjct: 148 TAFVSVMEGCSKYCTYC-----VVPYTRGEEISRPFDDVIAEVADLAEQGVREINLLGQN 202
Query: 154 -----PLIL--SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
L+ S L +++ + ++ + +RF + P+ +LI+ E
Sbjct: 203 VNAYRGLMADGSTASLALLIRYVAAVEGIGRIRFTTSHPV----EFGDDLIETFAE 254
>gi|298479874|ref|ZP_06998074.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
gi|298274264|gb|EFI15825.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
Length = 439
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|295084759|emb|CBK66282.1| MiaB-like tRNA modifying enzyme [Bacteroides xylanisolvens XB1A]
Length = 439
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|294809243|ref|ZP_06767959.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|294443637|gb|EFG12388.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
Length = 418
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|293368846|ref|ZP_06615450.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
gi|292636151|gb|EFF54639.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
Length = 439
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|291556614|emb|CBL33731.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
V10Sc8a]
Length = 457
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
+ + + +K R I+ H + RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186
>gi|237720003|ref|ZP_04550484.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450555|gb|EEO56346.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 439
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|237714843|ref|ZP_04545324.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406886|ref|ZP_06083435.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|294647146|ref|ZP_06724745.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
gi|229445168|gb|EEO50959.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355589|gb|EEZ04680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|292637433|gb|EFF55852.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
Length = 439
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C +C +C G + ++S E A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204
Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD + + ++K L ++ ++ R S ++P + E+I+ + +
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|225388623|ref|ZP_03758347.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
DSM 15981]
gi|225045299|gb|EEG55545.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
DSM 15981]
Length = 319
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 13/92 (14%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
RL+ + + V +L +R P P L+ L KPV++ +
Sbjct: 105 YAPLPRLRSLFERAVSHPDVALLSVATR-PDCLPDE-TVSLLAGL-NRRKPVWVELGLQT 161
Query: 216 PYEFS----------EEAIAAISRLANAGIIL 237
+E + A RL AGI +
Sbjct: 162 VHEDTARFIRRGYGFPVFEDACRRLKAAGITV 193
>gi|159127161|gb|EDP52276.1| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus
A1163]
Length = 828
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%)
Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157
F R + G G+ SS+ + L ++ E++ +G D + L
Sbjct: 274 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 332
Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208
+ RL+ L H+ LR HSRVP+V P++I+ +++ L P
Sbjct: 333 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 386
Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241
+ + P E ++ +I I+ + GI + SQ+
Sbjct: 387 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 427
>gi|167749297|ref|ZP_02421424.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
gi|167657742|gb|EDS01872.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
Length = 457
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
+ + + +K R I+ H + RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186
>gi|160902962|ref|YP_001568543.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
gi|160360606|gb|ABX32220.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
Length = 422
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155
+ + + C + C+ C L+ +D Y I +I V+ TGG+PL
Sbjct: 100 VTFAITNSCNLNCKHCTASA--NEVFRGTLNLRDIYKIFDYFIAMNLKI--VVITGGEPL 155
Query: 156 ILSH 159
I
Sbjct: 156 IRKD 159
>gi|114566851|ref|YP_754005.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337786|gb|ABI68634.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 451
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 18/90 (20%)
Query: 195 ELIQCLKEAGKPVYIAIH----------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
+ + L P+Y++IH N+P + + + RL A I + +Q VL
Sbjct: 148 DWDKILSMRLSPLYVSIHCMQPELRARLFNNPR--AANIKSELKRLQEAVIEVHTQIVLC 205
Query: 245 KGIND------DPEILANLMRTFVELRIKP 268
GIND LA + + + P
Sbjct: 206 PGINDAEVLQHSIYELAQFFPSVASVGVVP 235
>gi|330959524|gb|EGH59784.1| putative transcriptional regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 380
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
+ LK + C V C FC+ E V S K ++ + E +L I++ ++ +++
Sbjct: 4 VYLKPTNYCNVGCDFCYLPEEVRSDK-NRMTPQTLEHSLQLIRDLAAREGHDRV-SILYH 61
Query: 151 GGDPLILSHKRLQKVLKTLRY 171
GG+PL L+ + L + +R
Sbjct: 62 GGEPLTLAPEVLFEFSDAVRQ 82
>gi|328951851|ref|YP_004369185.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452175|gb|AEB08004.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 337
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C + C CF G ++ + L ++E +++V+FTGG+P
Sbjct: 8 VHFIITNQCNLNCLHCFAD---SGVAGYEMTMDEIRKVLRELRE-LGVFQVLFTGGEPFC 63
Query: 157 LSHKRLQKVLKTLRYIK 173
+ +V++ +
Sbjct: 64 RND--FFEVMEDAEAMD 78
>gi|312962557|ref|ZP_07777047.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
WH6]
gi|311283137|gb|EFQ61728.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
WH6]
Length = 322
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+
Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIDRLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYI 172
+L+ + + +
Sbjct: 73 SP--KLEAFMGAVGQM 86
>gi|297526282|ref|YP_003668306.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
gi|297255198|gb|ADI31407.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
Length = 450
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 22/131 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
+++ CP C++C V G + + + + Y + I ++ F D L
Sbjct: 175 IEISRGCPYGCKYC----QVSYMHGFFMRHRSIDNIVEYTGCMVEKNIRDIRFISPDSLA 230
Query: 156 -----ILSHKRL---QKVLKTLRYIKHVQIL--RF--HSRVPIVDPQRINPELIQCLKEA 203
+ RL +++L L K+V+ R S V P+ + + + L++
Sbjct: 231 YGLKTMSREPRLDLIEELLSRLYK-KYVERKGARIFYGSFPSEVRPEHLTRDAARILRKY 289
Query: 204 --GKPVYIAIH 212
K + +
Sbjct: 290 VANKNIILGAQ 300
>gi|317050296|ref|YP_004111412.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum
indicum S5]
gi|316945380|gb|ADU64856.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum
indicum S5]
Length = 325
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + + C + C +C + + + K +L+ ++ L + + +V TGG+PL
Sbjct: 16 VRISVTDRCNLKCFYCVPEDGICHATKDQLLTPEEIIRVLN-LLHGLGVSKVRITGGEPL 74
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
+ + + K+++ + I + + ++ P L+E G K V I++ +
Sbjct: 75 --ARRGIGKLIRQISAIG-FSDIAMTTNG-VLLP-----RFAGLLRECGLKRVNISLDSL 125
Query: 215 HPYEFS--------EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
HP F+ E+ I G + + +V ++GINDD
Sbjct: 126 HPERFASITGVDSFEQVWKGIQAAQENGLVPIKINAVAIRGINDD 170
>gi|332983050|ref|YP_004464491.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700728|gb|AEE97669.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
Length = 289
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+Y RIL ++ +C C FC ++ ++ +D + L ++ QI ++I TG
Sbjct: 16 KY--RILWEITDMCNQRCPFC------HAKGTNNITIEDVKKILDNLKI-LQIKDIILTG 66
Query: 152 GDPLILSHKRLQKVLKTLRY 171
G+P + + +++ ++
Sbjct: 67 GEPFLRKD--IFEIMDMIQR 84
>gi|323702894|ref|ZP_08114552.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323532152|gb|EGB22033.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 358
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 30/134 (22%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
++C CRFC + V+S + I E++ GG +
Sbjct: 65 TNICYCKCRFCAFWREPDAPDAYVISQDELFTKIDETIAVGG--TELLIQGG---LHPEL 119
Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
L + LR IK + HS P PE+ +++G +
Sbjct: 120 GLDYYVNLLRSIKKRYDIHIHSFSP--------PEIWHIARKSGVSI------------- 158
Query: 221 EEAIAAISRLANAG 234
A+ +L AG
Sbjct: 159 ---REALQQLHQAG 169
>gi|253581157|ref|ZP_04858416.1| radical SAM domain-containing protein [Ruminococcus sp.
5_1_39B_FAA]
gi|251847594|gb|EES75565.1| radical SAM domain-containing protein [Ruminococcus sp. 5_1_39BFAA]
Length = 244
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 59 QFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRI-----LLKLLHVCPVYCRF 111
Q +P K++ L ED + + +Y + + + C + C +
Sbjct: 42 QIVPDKQKELLEKYFIYEEDEAVFAEKTVIPYRDSKYYTLQGTSLHIFVMTNACNMNCVY 101
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--FTGGDPLILSHKRLQKVLK 167
C ++ KG +S + E A+ I ++ + + F GG+PL + ++ +++
Sbjct: 102 CQAQDSEQLDKG-KMSMETAERAVD-IALQTPVRRMTFEFQGGEPLT-NFDVIKHIVQ 156
>gi|253698670|ref|YP_003019859.1| radical SAM protein [Geobacter sp. M21]
gi|251773520|gb|ACT16101.1| Radical SAM domain protein [Geobacter sp. M21]
Length = 358
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 42/221 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P I + C + C C E+ S+ S+++ + L I + S+ V+ +GG
Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
+PL+ L + +L R+ + + E+ + +K+A K V +
Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112
Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
+ +H N P F AA G L S K + +AN +
Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIANTFK 168
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G+ I++ L K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199
>gi|294666547|ref|ZP_06731788.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603691|gb|EFF47101.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 343
Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
+ RY P R L L ++ C C +C + V G LS E +
Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ +V TGG+PL+ L ++ L I+ ++ L
Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107
>gi|319654152|ref|ZP_08008241.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2]
gi|317394086|gb|EFV74835.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2]
Length = 222
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + + L + L + E S + + TGG+P +LS
Sbjct: 34 FTTTVLCNMRCEHCAVGYTLQPRDPDALP---IDLMLKRLDEVSHLSSLSITGGEP-MLS 89
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
K ++ + L H + +R +IN L L + P +H +H
Sbjct: 90 KKSVKNYVAPLLRYAHERGVR----------TQINSNLTLELARYEEIIPYLDVLHISH 138
>gi|308182459|ref|YP_003926586.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4]
gi|308064644|gb|ADO06536.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4]
Length = 418
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQITGLKRIRIGS 221
>gi|307718379|ref|YP_003873911.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM
6192]
gi|306532104|gb|ADN01638.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM
6192]
Length = 240
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C + C +C E+V L ++ A L + + + V+FTGG+PL+
Sbjct: 24 VLFTGGCNLRCPYCHNPELVEGDPEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79
Query: 159 HKRLQKVLKTLRYI 172
L +++ +R +
Sbjct: 80 KGFLPSLIEEVRGM 93
>gi|297682136|ref|XP_002818786.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit G2-like
[Pongo abelii]
Length = 1159
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 747 KRKVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 800
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ + L+ G ++IH H F E +S L +
Sbjct: 801 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 853
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 854 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 910
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 911 RSLGIMQTVKG 921
>gi|260592743|ref|ZP_05858201.1| translation initiation factor IF-1 [Prevotella veroralis F0319]
gi|288803955|ref|ZP_06409378.1| translation initiation factor IF-1 [Prevotella melaninogenica D18]
gi|302345096|ref|YP_003813449.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC
25845]
gi|303237492|ref|ZP_07324057.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN]
gi|325269513|ref|ZP_08136129.1| translation initiation factor IF-1 [Prevotella multiformis DSM
16608]
gi|325856032|ref|ZP_08171921.1| translation initiation factor IF-1 [Prevotella denticola CRIS
18C-A]
gi|327313212|ref|YP_004328649.1| translation initiation factor IF-1 [Prevotella denticola F0289]
gi|260535274|gb|EEX17891.1| translation initiation factor IF-1 [Prevotella veroralis F0319]
gi|288333588|gb|EFC72040.1| translation initiation factor IF-1 [Prevotella melaninogenica D18]
gi|302150166|gb|ADK96428.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC
25845]
gi|302482312|gb|EFL45342.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN]
gi|324988132|gb|EGC20099.1| translation initiation factor IF-1 [Prevotella multiformis DSM
16608]
gi|325483704|gb|EGC86668.1| translation initiation factor IF-1 [Prevotella denticola CRIS
18C-A]
gi|326945625|gb|AEA21510.1| translation initiation factor IF-1 [Prevotella denticola F0289]
Length = 72
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G I ISG + YI LPG KV++ +++ K G
Sbjct: 22 FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70
>gi|188997347|ref|YP_001931598.1| oxygen-independent coproporphyrinogen III oxidase
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932414|gb|ACD67044.1| oxygen-independent coproporphyrinogen III oxidase
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 368
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
C + C +C V + L + EA L Y+ I + F GG P L +
Sbjct: 12 CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69
Query: 161 RLQKVLKTLR-YIKHVQILRF 180
++ ++++ ++ +KH + L
Sbjct: 70 KIAEIIEFIKNNVKHQKNLEI 90
>gi|167763123|ref|ZP_02435250.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
43183]
gi|167699463|gb|EDS16042.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
43183]
Length = 432
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + I V+ +R H P P +L + ++E
Sbjct: 196 GVD--LYKRQMLPQLIEKISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244
>gi|149927643|ref|ZP_01915896.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp.
MED105]
gi|149823697|gb|EDM82925.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp.
MED105]
Length = 398
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 22/175 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP++C FC+ + LS+ + + + + + ++ F+GG+PL+
Sbjct: 17 LLAELTYRCPLHCVFCY-NPVDYKSNTNELSTAEWKETMKQARALGAV-QLGFSGGEPLL 74
Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH-- 212
+ L L Y ++ + P R + LK AG + ++
Sbjct: 75 RDDLEELVAYGHELGYYTNLITSGIGLK-----PTR-----LDALKAAGLDHIQVSFQDA 124
Query: 213 ---ANHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
AN ++ + + AG ++ VL + D + + L
Sbjct: 125 TQAANDALSDTKTFAKKLEIATAVKAAGWPMVLNVVLHRLNLDHIDSIIELAVKL 179
>gi|189426412|ref|YP_001953589.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189422671|gb|ACD97069.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 1288
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 77 PIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
PIG+ L DR++ + CP C FC+ + + ++ + AL
Sbjct: 1013 PIGEWYARHLPQAQWHIADRVINVHGGRGCPFSCNFCY-HHSKPRYRDIAVMMEEAQEAL 1071
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
+++ D ++ + R +++++ + + +R I+ R++
Sbjct: 1072 QRFDAN-----MLYFSDDLVLATPNRARQLVEAIHRLDRPISFSVSTRFDIL--ARMDDS 1124
Query: 196 LIQCLKEAG 204
L+Q LK+AG
Sbjct: 1125 LLQELKQAG 1133
>gi|77460368|ref|YP_349875.1| molybdenum cofactor synthesis-like [Pseudomonas fluorescens Pf0-1]
gi|77384371|gb|ABA75884.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
fluorescens Pf0-1]
Length = 322
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+
Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYI 172
+L+ + + +
Sbjct: 73 SP--KLESFMSAVGKM 86
>gi|22711909|ref|NP_683835.1| translation initiation factor 1 [Chaetosphaeridium globosum]
gi|25008606|sp|Q8M9V4|IF1C_CHAGL RecName: Full=Translation initiation factor IF-1, chloroplastic
gi|22416913|gb|AAM96513.1| translational initiation factor 1 [Chaetosphaeridium globosum]
Length = 78
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR++++ G + ISG + YI LPG KV++ +++ K G +Y +
Sbjct: 22 FRVSLDNGC----QVLAHISGKIRRNYIRILPGDKVKVELSPYDLTK-GRITYRLR 72
>gi|268610302|ref|ZP_06144029.1| pyruvate formate-lyase activating enzyme [Ruminococcus flavefaciens
FD-1]
Length = 247
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 22/191 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P + CP+ CR+C + KGT +++D +E + + TGG+
Sbjct: 17 PGVRFVVFFQGCPLRCRYCHNPDTWEFGKGTERTAEDLMKEYDSYKEFLKSGGITATGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL + L ++ L K V + + P+ + + + LK + H
Sbjct: 77 PL-AQPEFLAELFS-LAKSKGVHTC-LDTSAGVYSPEH-HEAIDKALKYTDLVMLDIKHI 132
Query: 214 NHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL------M 258
+ E I L GI + + V++ GI D + L L +
Sbjct: 133 DSAEHKKLTGMGNEHILAFAEHIRDL---GIPVWIRHVVVPGITDQHDELFALGEYLSTL 189
Query: 259 RTFVELRIKPY 269
L + PY
Sbjct: 190 SNLKALDVLPY 200
>gi|126727641|ref|ZP_01743473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
HTCC2150]
gi|126703057|gb|EBA02158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
HTCC2150]
Length = 424
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SS 128
ED + P R P L + C +C FC R V +L +
Sbjct: 118 EDKFEELKDRPK---ARRAPS-AFLTVQEGCDKFCTFCVVPYTRGAEVSRPVDRILREAR 173
Query: 129 KDTEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
+ E +A I Q + G D L ++++ + I+ ++ +RF + P
Sbjct: 174 ELVERGVAEINLLGQNVNAYHGEGPDG----DWTLAQLIREMATIEGLERIRFTTSHP 227
>gi|326390905|ref|ZP_08212456.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus JW 200]
gi|325993053|gb|EGD51494.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus JW 200]
Length = 466
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%)
Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70
QDL A + EI E + +TP A L+N + + E+ +
Sbjct: 16 QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ I Y +RI+ L + + C CR+C R Q+ L
Sbjct: 66 ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ ++ + ++E + G DP+ + V+KT+
Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155
>gi|300725257|ref|YP_003714586.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
gi|297631803|emb|CBJ92524.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
Length = 392
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148
I+LK+ C + C +C+ M S V+S + A + + + ++ +V
Sbjct: 14 IILKISERCNINCSYCYVFNMGNSLATDSPPVISLDNVLALRGFFERSAAENEIEVIQVD 73
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQCLKEAG 204
F GG+PL++ R ++ LR + SR+ + Q I+ E I ++
Sbjct: 74 FHGGEPLMMKKDRFDQMCDILRQGDYS-----GSRLELAL-QTNGILIDDEWISLFEKHK 127
Query: 205 KPVYIAI----HAN 214
I+I H N
Sbjct: 128 VHASISIDGPKHIN 141
>gi|297627043|ref|YP_003688806.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922808|emb|CBL57386.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 373
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 51/287 (17%), Positives = 94/287 (32%), Gaps = 47/287 (16%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
P G + P+ R P I +L C + CR C G + + +
Sbjct: 1 MSHPAGIGSVKPVNWAYDRAPMIIYWELTTACGLACRHCRATAQPDPAPGELTTDEALGV 60
Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQR 191
+ S VIFTGGDP+ L +++ R S P V P
Sbjct: 61 LDEFAGFGSPAPHVIFTGGDPMRRGD--LDQLIAAANQ-------RGLGVSLAPAVTP-L 110
Query: 192 INPELIQCLKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLAN---AGIILLSQS 241
++ + ++ LK A H + + A + LA+ AG+ + +
Sbjct: 111 LSAQRLKDLKALDVQAISLSLDGSTAAHHDGIRQVPGTFDATMQALADANAAGVPVQINT 170
Query: 242 VLLKGIND-DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
+ + D + L ++ + + L F +++ G + L+E
Sbjct: 171 L----VTDETAKDLDDVYELLKNYDVMQWSLF----------FLISVGRG----SQLREL 212
Query: 301 ISGLCQPFYILDLPGGYGKV-KIDTHNIKKVGNGSYCITDHHNIVHD 346
G + I +GK+ + IK Y + ++H
Sbjct: 213 TPGDAERTLIK-----WGKIGRTSPFRIKTTEAMQYRRINAQAMMHA 254
>gi|189346205|ref|YP_001942734.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM
245]
gi|189340352|gb|ACD89755.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM
245]
Length = 332
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 34/171 (19%)
Query: 99 LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C + C +C E VG L + D A L I + ++ FTGG+
Sbjct: 20 IAVTSRCNLRCTYCMSEEHECHSSVGHPD--TLKTADV-ALLIRILAGLGVRKIRFTGGE 76
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
PL+ + + ++++T + ++ + + + + + L++AG + +
Sbjct: 77 PLLRND--IAELVRTAKDTVGIETVSLTTNGV------LLHKHLDGLRKAGLD-ALNLSI 127
Query: 214 NHPYEFSEEAIAAISR--------------LANAGIILLSQSVLLKGINDD 250
+ E AI+R LA+ I + V+++GIN D
Sbjct: 128 DT---LDRERYRAITRRDVFEQVKANLDTLLASKTIPVKLNVVMMRGINSD 175
>gi|162450597|ref|YP_001612964.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56']
gi|161161179|emb|CAN92484.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56']
Length = 283
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 30/107 (28%)
Query: 188 DPQRINPELIQCLKEAGKPVYI---------------AIHANHPYEFSEEAIAAISRLAN 232
P + E+++ L AG V++ H H +F+ + +
Sbjct: 89 LPATVAEEVVKALANAGLDVWVYRGSDWFIRRRDAPHVTHEEHTVQFAPIVVD------D 142
Query: 233 AGIILLSQSVLLKGINDD----PEILANLMRTF----VELRIKPYYL 271
G +L + +V + G++DD L + F R +PYYL
Sbjct: 143 LGGVLAN-AVKIVGVSDDLALVARCEGELRQRFGAQVSAARSQPYYL 188
>gi|330838436|ref|YP_004413016.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC
35185]
gi|329746200|gb|AEB99556.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC
35185]
Length = 432
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%)
Query: 72 EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ D + + PL G R R LK+ C +C FC G + +L S
Sbjct: 120 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 177
Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
EAA + E++ T G D L L ++ + + ++ LR S
Sbjct: 178 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 231
>gi|319940618|ref|ZP_08014961.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
3_1_45B]
gi|319805984|gb|EFW02742.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
3_1_45B]
Length = 402
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--D 153
R L++L ++C CR+C R+ K ++ ++ A + + + G D
Sbjct: 60 RGLIELSNICTANCRYCGIRKANHDVKRYTMTKEEIVEAAVWAADNGYGSVCLQAGERRD 119
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR 179
K ++ + + LR I H++ R
Sbjct: 120 -----EKFIEFICECLREI-HLRTKR 139
>gi|312880406|ref|ZP_07740206.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
gi|310783697|gb|EFQ24095.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
Length = 603
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
P P+ RQ + +E +D + P IVH DR+ +++ C CRF
Sbjct: 212 PRTPVRRQVLADLDE-----GFLQDRM----LVPSTAIVH---DRVAVQVFRGCTRGCRF 259
Query: 112 CF 113
C
Sbjct: 260 CQ 261
>gi|307266298|ref|ZP_07547838.1| biotin and thiamin synthesis associated [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306918676|gb|EFN48910.1| biotin and thiamin synthesis associated [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 466
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%)
Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70
QDL A + EI E + +TP A L+N + + E+ +
Sbjct: 16 QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ I Y +RI+ L + + C CR+C R Q+ L
Sbjct: 66 ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ ++ + ++E + G DP+ + V+KT+
Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155
>gi|260566493|ref|ZP_05836963.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4
str. 40]
gi|260156011|gb|EEW91091.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4
str. 40]
Length = 344
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLYSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|160940888|ref|ZP_02088228.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC
BAA-613]
gi|158436132|gb|EDP13899.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC
BAA-613]
Length = 453
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 22/123 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R +K+ C +C +C G + +D EA + + + EV+ TG
Sbjct: 144 HTRAFIKVQDGCNQFCSYCIIPYARGRVRSR--KPEDVEAEVKGLVAR-GYREVVLTGIH 200
Query: 152 ----------GDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
G P+ L +++ + ++ ++ +R S ++P+ I E +
Sbjct: 201 LSSYGTEHMEGSPVKGGDWDSGPLWDLIERIHRVEGLERIRLGS----LEPRIITREFAE 256
Query: 199 CLK 201
L
Sbjct: 257 KLA 259
>gi|145590531|ref|YP_001152533.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
13514]
gi|145282299|gb|ABP49881.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 301
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 28/187 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
L C C +C+ + + + +++ + V + DP
Sbjct: 27 LNPYTGCGHRCLYCYITSYIPNAFSPRPKEDLIDKVRRDLEKIPRGAVVSLSNSSDPYTP 86
Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+L + + + + + + ++ P+V + L+ V + I
Sbjct: 87 PEAQLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDVLQRHLGRVAVQITITT 139
Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQSVLLKGI----NDDPEILANLMRT 260
E A + A+ RL+ AGI + +V L I NDD E + ++
Sbjct: 140 LREDLAAVLEPGAPRPVGRLEAVRRLSEAGIPV---TVRLDPIIPLLNDDGENIEGVVSK 196
Query: 261 FVELRIK 267
E +
Sbjct: 197 AAEAGAR 203
>gi|83311853|ref|YP_422117.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1]
gi|82946694|dbj|BAE51558.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1]
Length = 400
Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 18/73 (24%)
Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG--IILLSQS 241
P+ P R G PV + H HP E + EA+A + AG I + S
Sbjct: 206 SPVTLPAR-----------KGDPV-VVSHDEHPRETTVEALAKLKAPFRAGGSITAGNAS 253
Query: 242 VLLKGINDDPEIL 254
G+ND L
Sbjct: 254 ----GVNDGAAAL 262
>gi|332829284|gb|EGK01938.1| MiaB-like tRNA modifying enzyme [Dysgonomonas gadei ATCC BAA-286]
Length = 436
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 21/145 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C +C FC R +++ AA E++
Sbjct: 148 RTRYFLKVQDGCDYFCSFCTIPFARGRSRNGTIESMVKQAQEVAA-------KGGKEIVL 200
Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TG GD + + ++K L + ++ R S ++P + E+I + ++ +
Sbjct: 201 TGVNIGDFGRTTGETFFDLIKALDEVDGIERYRISS----IEPNLLTDEIIDFVSKSKR- 255
Query: 207 VYIAIHANHPYEFSEEAIAAISRLA 231
A H + P + +A+ + R
Sbjct: 256 --FAPHFHIPLQSGSDAVLKLMRRR 278
>gi|289577818|ref|YP_003476445.1| biotin and thiamin synthesis associated [Thermoanaerobacter
italicus Ab9]
gi|297544104|ref|YP_003676406.1| biotin and thiamin synthesis associated [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|289527531|gb|ADD01883.1| biotin and thiamin synthesis associated [Thermoanaerobacter
italicus Ab9]
gi|296841879|gb|ADH60395.1| biotin and thiamin synthesis associated [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 466
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L + + C CR+C R Q+ L+ ++ + ++E +
Sbjct: 74 YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQQRKKLTMEEVRREVEILEEMGHKRLAV 132
Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
G DP+ + V+KT+
Sbjct: 133 EAGEDPVNCPIDYIVDVIKTIYD 155
>gi|269792240|ref|YP_003317144.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099875|gb|ACZ18862.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 439
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
R +K+ C C +C ++ G + L+ ++ + EV+ TG
Sbjct: 142 HTRAFVKVQDGCSRGCTYCIVPKLRGPSISRPF-----QEVLSEVRSLVESGALEVVLTG 196
Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
+ L R L +++ L ++ + +RF S P QR+ L
Sbjct: 197 ---VHLGDYRWDGLDLADLVRALSSVEGLGRIRFGSIEPFGLSQRLLEAL 243
>gi|226361740|ref|YP_002779518.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
gi|226240225|dbj|BAH50573.1| putative ABC transporter substrate-binding protein [Rhodococcus
opacus B4]
Length = 325
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
+ + A L GL P ++D G G++ + + ++ +T
Sbjct: 216 PDDGAADLFADL-----GLALPQNLVDQAGAGGRIPLSPERVNELNVDLLVMTGQEG 267
>gi|157364072|ref|YP_001470839.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
gi|157314676|gb|ABV33775.1| Radical SAM domain protein [Thermotoga lettingae TMO]
Length = 432
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C + C CF + +L+ + + I + I V GG+PL
Sbjct: 71 ILPTFNCNLQCIHCFYESKP-DENYQMLNKEYIPLIIDLINRYN-IENVTIGGGEPLT-- 126
Query: 159 HKRLQKVLKTLRY 171
L+ +L +
Sbjct: 127 WPHLRNLLTEILE 139
>gi|119513285|ref|ZP_01632326.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena
CCY9414]
gi|119462073|gb|EAW43069.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena
CCY9414]
Length = 316
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRI 97
L+P IA L+ + P + ++E + D + + S + R + +
Sbjct: 30 LSPHIAELLQGNEPITEVR-----NEQEFVTMGFLHYGDEV-EQIISKFEN-ARRKKNIL 82
Query: 98 LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTG 151
C C +CF+ + Q G +S + A + YIQ E++++++ + G
Sbjct: 83 NFTILPTLACNFSCDYCFQGDH---QHGQFMSPETQSATIRYIQSLIVEENRVFDCKWFG 139
Query: 152 GDPLILSHKRL 162
G+PL+ L
Sbjct: 140 GEPLLAKETVL 150
>gi|70726083|ref|YP_252997.1| hypothetical protein SH1082 [Staphylococcus haemolyticus JCSC1435]
gi|68446807|dbj|BAE04391.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 381
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 16/135 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+C + C C + ++ L L I Q+ + TGG+P + S
Sbjct: 36 FTTTTLCNMRCSHCAVGYTLQTKDPDALPMDIIYRRLDEI---PQLRTISITGGEP-MFS 91
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
K ++ ++K L + + + PQ ++ + + +H +H
Sbjct: 92 KKSIKNIVKPLLKYAKDRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 143
Query: 216 -PYEFSEEAIAAISR 229
EF++ A+ +
Sbjct: 144 TIQEFTDVGFGAMKK 158
>gi|320010716|gb|ADW05566.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 361
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 33/155 (21%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151
+LL L CP+ C C T D + + ++ + + + V+ TG
Sbjct: 17 LLLGLTRRCPLSCAHCS-----TGSSLTTREEPDADRLVRFVGSFTRENRPDV--VMLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPI---VDPQR---INPELIQCLKEAG 204
G+PL+L +++ L R SR + + R I P +++ ++
Sbjct: 70 GEPLLLP-----ALVEELSA-----RARAAGSRTALLSGMFFARSREIPPPVLRAIRGVD 119
Query: 205 K-PVYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237
+ H H E + A+ R+ G+ +
Sbjct: 120 HFSASLDAH--HEREIPRADVFRAVHRIRETGVAV 152
>gi|168700072|ref|ZP_02732349.1| molybdenum cofactor biosynthesis protein A [Gemmata obscuriglobus
UQM 2246]
Length = 337
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C + + +L+ ++ A + + + +V TGG+PL+
Sbjct: 26 ISVTDRCNLRCTYCMPENVTFQDRSELLTFEEIVAFVR-VAVPLGVNKVRLTGGEPLM-- 82
Query: 159 HKRLQKVLKTLRYIKHVQIL 178
K L K+++ L + + +
Sbjct: 83 RKELHKLVRLLTAVPGLTDI 102
>gi|168207240|ref|ZP_02633245.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
E str. JGS1987]
gi|170661412|gb|EDT14095.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
E str. JGS1987]
Length = 331
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ + ++K + I ++ + + + + ++ L E G K V I++
Sbjct: 80 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + ++ + +I + + + +V+L+ N + + +L+ E I
Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 189
Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
F+ +T E +I+ K+ +S L P + + G GK+
Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 247
>gi|18310772|ref|NP_562706.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
str. 13]
gi|20141618|sp|Q9WX96|MOAA_CLOPE RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|18145453|dbj|BAB81496.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
str. 13]
Length = 323
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
+ + ++K + I ++ + + + + ++ L E G K V I++
Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124
Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ E + ++ + +I + + + +V+L+ N + + +L+ E I
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 181
Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
F+ +T E +I+ K+ +S L P + + G GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239
>gi|312879755|ref|ZP_07739555.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
gi|310783046|gb|EFQ23444.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
Length = 454
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C CR+C V + + E + EV+ TG
Sbjct: 152 HTRAFVKVQDGCSHGCRYCIVPR-VRGRSVSRPPEDVLEEVRGLVGS--GCREVVLTGVH 208
Query: 154 -PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
L + L +++K L ++ + LRF S ++P + L+ L E
Sbjct: 209 LGLYGRDRGTDLGELVKRLARVEGLVRLRFGS----LEPFGLGESLLDVLGET 257
>gi|254292479|ref|YP_003058502.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
gi|254041010|gb|ACT57805.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
Length = 435
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + + G+ R R +++ C C FC G+ + +V + + +
Sbjct: 135 SVTETAGHLVDGLEGR--ARAFVQVQTGCDHRCTFCIIPYGRGNSR-SVPAGEVVDQVRQ 191
Query: 137 YIQEKSQIWEVIFTGGD----PLILSH-KRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQ 190
+ + +EV+ TG D L + L ++ + + ++ LR S + ++
Sbjct: 192 LVAKGH--YEVVLTGVDLTSWGADLPNAPNLGNLVARILKLAPDLKQLRL-SSIDAIE-- 246
Query: 191 RINPELIQCLKEAGKPVYIAIHAN---------------HPYEFSEEAIAAISRLANA 233
I+ +L + K + +H + H E +AI RL A
Sbjct: 247 -IDDQLFDLIA-HDKRIAPHLHLSFQSGDNMILKRMKRRHSRE---DAINLCQRLRAA 299
>gi|240143426|ref|ZP_04742027.1| radical SAM domain protein [Roseburia intestinalis L1-82]
gi|257204617|gb|EEV02902.1| radical SAM domain protein [Roseburia intestinalis L1-82]
Length = 326
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)
Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ + C C +C R + + + E AL ++ +I TG
Sbjct: 54 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109
Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
DP + +RL +L L I + + ++ RI + +L+ + E
Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162
Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
K + + + ++E I + + AGI ++ + +L IND +
Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222
Query: 254 LANLMRTFVELRIK 267
+ NL+ V+ +K
Sbjct: 223 IKNLLDACVDAGVK 236
>gi|220905208|ref|YP_002480520.1| thiamine biosynthesis protein ThiH [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869507|gb|ACL49842.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 463
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 14/120 (11%)
Query: 58 RQFIPQKEELNILPEEREDPI-GDNNHSPLKGIVHR-YPDRILL----KLLHVCPVYCRF 111
Q +P + + +DP+ + + + R Y DR++L L + C C +
Sbjct: 38 MQMVPLDADEIVALMRVDDPVEHERILAVADEVKQRVYGDRMVLSAPLHLSNHCGSECLY 97
Query: 112 CFRREMVGS-QKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
C R G ++ + S + EAAL I++ +I + +G L + ++ + + +
Sbjct: 98 CANRRGNGQIERKYMTSPEMREAALRLIRQGHKRI--FLVSGQ----LPNADVEYLAEAI 151
>gi|126660238|ref|ZP_01731354.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
gi|126618477|gb|EAZ89230.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
Length = 247
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 44/180 (24%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT 150
P RI ++L + C +C FC+ +G + + + +I+ KS V F
Sbjct: 3 PQRISIELTNQCSKHCHFCYNHSHHLGE------TRWQADELVDFIKDCAKSGTKAVSFG 56
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLK-EAGKPVY 208
GG+PL + L +VL L+ + + R S ++ +L++ L V+
Sbjct: 57 GGEPLEYPN--LFEVLSELQGV----LFRSITSNGL-----HLHGDLLEKLVIANPDKVH 105
Query: 209 IAIHANHPYEFSEEAIAAISRLA-------NAGIILL------------SQSVLLKGIND 249
++IH E EE I+++ +GI LL SQ +L GIN
Sbjct: 106 LSIHY---PEQKEEVKRVINQVKLLDSLGIRSGINLLVPQSKLQVATQTSQMILEAGINR 162
>gi|94266077|ref|ZP_01289795.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93453360|gb|EAT03791.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 912
Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%)
Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142
P IVH DR+ L++ C CRFC ++ ++ ALA+I++
Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199
++ + + GD + ++ L +++ L K + +R + + E+++
Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355
Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235
++ K + + EA + R+ N GI
Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383
>gi|291531854|emb|CBK97439.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
70/3]
Length = 457
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKRAMDFLIKHSANRENLEVDFFGGEPL 160
Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
+ + + +K R I+ H + RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186
>gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
OG1RF]
Length = 321
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95
>gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
PC1.1]
gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
62]
Length = 321
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95
>gi|291544795|emb|CBL17904.1| DNA repair photolyase [Ruminococcus sp. 18P13]
Length = 289
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 20/185 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGG--D 153
+ L C C +C R + E A+ +++ + + +I TG D
Sbjct: 16 MNLYRGCTHGCIYCDARSTCYQMDHPFEDVEVKENAVELLEDALCRKRHRCMIGTGSMSD 75
Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
P I ++L + L I+ + F ++ P R + +L++ + K V
Sbjct: 76 PYIPLEQQLCHMRSCLELIQRYGFGVTFQTKSPDFL--R-DIDLMEQINHVTKCVVQMTI 132
Query: 213 ANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTF 261
+ + +AA+ GI ++ + LL IND PE L +++R
Sbjct: 133 TTYDDVLCRILEPCVAPTSARLAALHACRKRGIPTVVWLTPLLPYINDTPENLRSILRAC 192
Query: 262 VELRI 266
+ +
Sbjct: 193 RDAGV 197
>gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
AR01/DG]
gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ARO1/DG]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
CH188]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
D6]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Fly1]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
E1Sol]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
Merz96]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
DS5]
gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
JH1]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
ATCC 4200]
gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T3]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
T2]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1]
gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1]
gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis TX1322]
gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8]
Length = 324
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98
>gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
[Enterococcus faecalis ATCC 29200]
Length = 321
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
D + L L C + C +C G +K +L+ + L I K I +V TG
Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
G+PL+ + L ++K ++ I ++ + +
Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95
>gi|163747528|ref|ZP_02154878.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
HEL-45]
gi|161379206|gb|EDQ03625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
HEL-45]
Length = 434
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155
L + C +C FC G++ + + K E A ++ + EV G +
Sbjct: 151 AFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAEKVLEEARDLVER--GVREVTLLGQNVNA 207
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
L +++ L + ++ +R+ + P
Sbjct: 208 YHGGMTLADLIRALAKVDGLERIRYTTSHPN 238
>gi|15894635|ref|NP_347984.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum ATCC
824]
gi|15024290|gb|AAK79324.1|AE007647_4 Thiamine biosynthesis enzyme ThiH [Clostridium acetobutylicum ATCC
824]
gi|325508771|gb|ADZ20407.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum EA
2018]
Length = 472
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C LS +D + +Q+ +
Sbjct: 80 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIARKKLSQEDVKRETIALQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
G DP+ + + +KT+ IKH
Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165
>gi|16331844|ref|NP_442572.1| hypothetical protein sll0098 [Synechocystis sp. PCC 6803]
gi|3287936|sp|Q55880|RLMN_SYNY3 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|1208474|dbj|BAA10642.1| sll0098 [Synechocystis sp. PCC 6803]
Length = 350
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 37/206 (17%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWE 146
GI + + C + C FC + G + S + + L +E ++
Sbjct: 96 GIPSSKRLTVCVSSQVGCAMDCNFCATGK--GGFIRNLESHEIVDQVLTVQEEFHERVSN 153
Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----IVDPQRINPELIQCLK 201
V+F G G+PL+ L +V+K + + V + R + P +I + L
Sbjct: 154 VVFMGMGEPLL----NLPQVVKAVECLNQV--VGIGQRALTISTVGLPGKI-----RQLA 202
Query: 202 EAGKPVYIAIHANHPYE-----FSEEAIAA-ISRLAN--------AGIILLSQSVLLKGI 247
+ V A+ + P + A + +L G + + VLL G+
Sbjct: 203 DRHLQVTFAVSLHAPNQTLRQSLIPSARHYPLEQLLADCRAYVETTGRRVTFEYVLLAGV 262
Query: 248 NDDPEILANLMRTFV----ELRIKPY 269
ND P L + + + PY
Sbjct: 263 NDQPVHAEELAQKLRGFQTHVNLIPY 288
>gi|238759763|ref|ZP_04620921.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
35236]
gi|238701995|gb|EEP94554.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
35236]
Length = 326
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + ++ TGG+P +
Sbjct: 17 LSVTDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ T+R ++ L + R+ + Q ++AG I + + P
Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-RDAGLT-AINVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
+F + + I +AG + +VL++ +ND
Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFDKVKINAVLMRDVNDR 169
>gi|224540006|ref|ZP_03680545.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518373|gb|EEF87478.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus
DSM 14838]
Length = 432
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G K ++ + Y+ K E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVSKGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + + V+ +R H P P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISEVPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244
>gi|218131133|ref|ZP_03459937.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
gi|217986653|gb|EEC52987.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
Length = 432
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVARGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + + V+ +R H P P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244
>gi|160882776|ref|ZP_02063779.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483]
gi|156111800|gb|EDO13545.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483]
Length = 436
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ + ++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300
>gi|310642492|ref|YP_003947250.1| iron-only hydrogenase maturation protein hydg [Paenibacillus
polymyxa SC2]
gi|309247442|gb|ADO57009.1| Iron-only hydrogenase maturation protein HydG [Paenibacillus
polymyxa SC2]
Length = 470
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 93 YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+L + + C C +C + S + L+ ++ + +QE V+
Sbjct: 80 YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
G DP+ + ++ LR I V++
Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165
>gi|260170245|ref|ZP_05756657.1| putative Fe-S oxidoreductase [Bacteroides sp. D2]
gi|315918608|ref|ZP_07914848.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313692483|gb|EFS29318.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 436
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
+ L+ I+D+ + LMR
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267
Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
++ E+ +++ ++++ G+ + ++ PG
Sbjct: 268 --------------VSKEDTYQLIEQFRKEVPGIHLRTTLMVGHPGE 300
>gi|256821212|ref|YP_003142411.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256799192|gb|ACV29846.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548]
Length = 518
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
D I ++ I + N L + + I + + ++ + L++ C + C++C
Sbjct: 89 DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140
Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159
E + + D E A+ +++ SQ + + F GG+PLI
Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192
>gi|227500012|ref|ZP_03930091.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098]
gi|227217909|gb|EEI83196.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098]
Length = 518
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
D I ++ I + N L + + I + + ++ + L++ C + C++C
Sbjct: 89 DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140
Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159
E + + D E A+ +++ SQ + + F GG+PLI
Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192
>gi|193216143|ref|YP_001997342.1| radical SAM domain-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193089620|gb|ACF14895.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 353
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P ++L + C + C +C+ R + +S + E AL + + V TGG
Sbjct: 8 KPRNVMLMVTGDCNLTCAYCYERGDAKYKSRRPMSLEIAEKALRLAASSGKAFHVQLTGG 67
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+P + L+ ++K R + + +
Sbjct: 68 EPTLEQDLVLE-IIKKTRAVSPESTISLQT 96
>gi|169795655|ref|YP_001713448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
gi|169148582|emb|CAM86448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
Length = 346
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + +++ ++ I + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + Q LK+AG + I++ + P
Sbjct: 86 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I +AG+ VL+K NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181
>gi|70607233|ref|YP_256103.1| hypothetical protein Saci_1489 [Sulfolobus acidocaldarius DSM 639]
gi|68567881|gb|AAY80810.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
Length = 323
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 22/157 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P K+ C ++C FC + + S++ + + ++ S I + F GG+
Sbjct: 23 PAYATFKVTSRCNLHCSFC--NPSYYNGELGESSTEKVKKMIDNMR-DSSIVVLSFEGGE 79
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
P +++ + L H + + R+N E L + + +H
Sbjct: 80 P------TIRQDILELLEYAHDGSFYV---MLTTNGYRLNDESF--LSKLADRIDF-LHY 127
Query: 214 N----HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
+ H +AI + R + G+ + Q+V+ +
Sbjct: 128 SIDEYHWN---AKAIDNLQRFRDYGLKVNVQTVVTRY 161
>gi|57239481|ref|YP_180617.1| hypothetical protein Erum7550 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579459|ref|YP_197671.1| hypothetical protein ERWE_CDS_07950 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161560|emb|CAH58487.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418085|emb|CAI27289.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 413
Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R L+++ + C C FC + G+ + E + +++ + EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180
Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
D +S + + L I ++ LR S + + + I +LI +
Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231
Query: 203 AGKPVYIAIH 212
G H
Sbjct: 232 -GNEPRFMPH 240
>gi|329765915|ref|ZP_08257480.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137621|gb|EGG41892.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 293
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
++ ++ C C FC +M S++ + + + + + ++ ++ GD
Sbjct: 19 LIFQVTLGCSFNECSFC---DMYRSKQYSERPWDEVKLEIDLMAKQLPDTRKIFLADGDA 75
Query: 155 LILSHKRLQKVLKTL-RYIKHVQIL 178
L L + + K++K L +++ +
Sbjct: 76 LNLDSEYIVKIVKYLYEKFPNLERI 100
>gi|308069436|ref|YP_003871041.1| thiamine biosynthesis enzyme thiH [Paenibacillus polymyxa E681]
gi|305858715|gb|ADM70503.1| Thiamine biosynthesis enzyme ThiH [Paenibacillus polymyxa E681]
Length = 470
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 93 YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+L + + C C +C + S + L+ ++ + +QE V+
Sbjct: 80 YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
G DP+ + ++ LR I V++
Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165
>gi|291458549|ref|ZP_06597939.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
078 str. F0262]
gi|291419082|gb|EFE92801.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
078 str. F0262]
Length = 460
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 26/125 (20%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
R LK+ C +C +C + G + L D + + E E++ TG
Sbjct: 147 RAFLKVQDGCGQFCSYCIIPYLRGEIRSRALP--DILREVRALSE-GGYREIVLTGIHLS 203
Query: 152 -------GD------PLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
GD L + L +++ + + ++ +R S ++P+ I+ +
Sbjct: 204 SYGMESCGDRERRERAFNAALPSESLLSLIREVASVSGIERVRLGS----LEPRIISRDF 259
Query: 197 IQCLK 201
++ L
Sbjct: 260 VRALS 264
>gi|213158400|ref|YP_002319698.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB0057]
gi|215483142|ref|YP_002325349.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB307-0294]
gi|301345476|ref|ZP_07226217.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB056]
gi|301510810|ref|ZP_07236047.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB058]
gi|301595060|ref|ZP_07240068.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB059]
gi|332852472|ref|ZP_08434211.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013150]
gi|332871325|ref|ZP_08439874.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013113]
gi|213057560|gb|ACJ42462.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB0057]
gi|213988902|gb|ACJ59201.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB307-0294]
gi|332729174|gb|EGJ60517.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013150]
gi|332731609|gb|EGJ62895.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6013113]
Length = 343
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + +++ ++ I + TGG+PL+
Sbjct: 26 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 82
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + Q LK+AG + I++ + P
Sbjct: 83 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 138
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I +AG+ VL+K NDD
Sbjct: 139 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178
>gi|206901313|ref|YP_002251416.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
H-6-12]
gi|206740416|gb|ACI19474.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
H-6-12]
Length = 326
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLI 156
+ C + CR C++ S++ +A +K V TGG+PLI
Sbjct: 9 WHITDFCNLRCRHCYQENFDRSRELPFEKLVHIIEDIATFLKKEGFDRLSVNLTGGEPLI 68
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
L ++LKTL + V + + + P ++ E + LK
Sbjct: 69 YP--HLNQILKTLNKVDIVHEINIITNGIL-SPNKVIEESYEKLK 110
>gi|77163772|ref|YP_342297.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrosococcus oceani ATCC
19707]
gi|254435338|ref|ZP_05048845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
AFC27]
gi|123757951|sp|Q3JEH9|MIAB_NITOC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|76882086|gb|ABA56767.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani ATCC
19707]
gi|207088449|gb|EDZ65721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
AFC27]
Length = 447
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 34/157 (21%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ ++ C YC FC V S+ + +A I + + E+ G
Sbjct: 148 TAFVSVMEGCSKYCSFC-----VVPYTRGEEISRPFDDVIAEIVGLAEQGVREITLLGQN 202
Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
GD L ++ + I+ ++ +RF + P+ + LIQ
Sbjct: 203 VNAYRGSIGEGD-----TADLALLIHYVASIEGIERIRFTTSHPV----EFSDSLIQAFA 253
Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
E + H + P + + L G +L
Sbjct: 254 EVP---ALVSHLHLPVQ---SGSDRMLSLMKRGHTVL 284
>gi|89069602|ref|ZP_01156941.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
HTCC2516]
gi|89044800|gb|EAR50900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
HTCC2516]
Length = 437
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + + A A ++ + E+ G +
Sbjct: 152 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAERVVDEARALVEA--GVREITLLGQNVN 208
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
L +++TL I ++ +R+ + P
Sbjct: 209 AYHGHEGGLAGLVRTLAAIDGLERIRYTTSHPN 241
>gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris
MG1363]
gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 275
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD
Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
P++ L ++ L K+ I+
Sbjct: 68 PILHP--SLINFVQLLSEHKNYPII 90
>gi|20807443|ref|NP_622614.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
gi|20515967|gb|AAM24218.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
Length = 437
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C YC +C G + ++ + E E++ TG
Sbjct: 142 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 198
Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + L V+K + ++ ++ +R S P + + EL K
Sbjct: 199 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 254
>gi|254172863|ref|ZP_04879537.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
sp. AM4]
gi|214033019|gb|EEB73847.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
sp. AM4]
Length = 308
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 41/170 (24%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C FC R + + + + ++ E + I + I +V TGG+P +
Sbjct: 16 ISLTQECNFRCFFCHREGQRFLAKNE---MMPEEIERLVR-IASRLGIRKVKLTGGEPTV 71
Query: 157 LSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211
+++ +R I +V+ L SR+ EL + L +AG V +++
Sbjct: 72 RED-----IIEIVRRIKPYVKDLSMTTNGSRL---------KELAEPLAKAGLDRVNVSL 117
Query: 212 HANHP---YEFSEE---------AIAAISRLANAGIILLSQSVLLKGIND 249
H+ P + A+ L+ L+ +V +KG+ND
Sbjct: 118 HSLKPDVYKRITGVDIFETVLEGIEEAVKYLSPVK---LNMTV-MKGLND 163
>gi|197103746|ref|YP_002129123.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium
zucineum HLK1]
gi|196477166|gb|ACG76694.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium
zucineum HLK1]
Length = 341
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C + C +C M K VL+ ++ + + + ++ TGG+PL+
Sbjct: 27 LSVTDRCDLRCVYCMAEHMTFLPKAQVLTLEELDRIASAFVA-LGVRKLRLTGGEPLV-- 83
Query: 159 HKRLQKVLKTLRY 171
K + ++++ L
Sbjct: 84 RKGVMELIEALSR 96
>gi|170782849|ref|YP_001711183.1| molybdenum cofactor biosynthesis protein A [Clavibacter
michiganensis subsp. sepedonicus]
gi|169157419|emb|CAQ02608.1| molybdenum cofactor biosynthesis protein A [Clavibacter
michiganensis subsp. sepedonicus]
Length = 361
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 19/163 (11%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C E + + L + E + + +V FTGG+PL+
Sbjct: 40 ISLTDRCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLR 99
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
L +++ + + + Q LK+AG + +++ + H
Sbjct: 100 RD--LIEIIAACAALPDRPEISLTTNAIG------LASRAQALKDAGLDRINVSLDSVHA 151
Query: 217 YEFSEEAIAAISRLANAGI---------ILLSQSVLLKGINDD 250
F GI + +VL++G+NDD
Sbjct: 152 ETFRLITRRPFLDRVLDGIDAAAAAGLTPIKINAVLVRGVNDD 194
>gi|159041911|ref|YP_001541163.1| radical SAM domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157920746|gb|ABW02173.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
Length = 384
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C C+ G L++++ + E + ++FTGG+PL+
Sbjct: 38 VSWNITRRCNLKCLHCYISA--GDADENELTTEEAMNLVEQFSELK-VPLILFTGGEPLM 94
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
L L + + +R I E+ L EAG
Sbjct: 95 RGD------LIKLAHYARDKGIRIALSTNGTL---ITREMASKLAEAG 133
>gi|310828942|ref|YP_003961299.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
gi|308740676|gb|ADO38336.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
Length = 346
Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 46/151 (30%), Gaps = 12/151 (7%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
R L++ + C C +C R G K LS + A + V+ G DP
Sbjct: 52 TRGLIEFSNYCKNDCYYCGIRRGNGCVKRYRLSEDNIMDCCATGYKLGFRTFVLQGGEDP 111
Query: 155 LILSHKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
+ R+ +++ +R I L R + + L +
Sbjct: 112 WF-NDDRMCRIVGRIRHTYPDCAI----TLSLGERSAESYKRLYAAGANRYLLRHETANF 166
Query: 209 IAIHANHPYEFSEEAIAAI-SRLANAGIILL 238
H HP S E L + G +
Sbjct: 167 SHYHTLHPKALSPERRQRCLYNLKSIGYQVG 197
>gi|332675311|gb|AEE72127.1| putative oxygen-independent coproporphyrinogen-III oxidase
[Propionibacterium acnes 266]
Length = 407
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 22/125 (17%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120
P + ++ + + + P G Y + C C +C F ++ +
Sbjct: 6 PYPRIMRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57
Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ ++ E A + + + + F GG P +LS +L ++ I
Sbjct: 58 MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111
Query: 174 HVQIL 178
H++ L
Sbjct: 112 HIRTL 116
>gi|325661547|ref|ZP_08150171.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472074|gb|EGC75288.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 484
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 20/130 (15%)
Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALA 136
++ H + L + C ++C+ C+ V K + K +A
Sbjct: 88 EDEEIKAPN-THYIIRTVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWP 145
Query: 137 YIQEKSQIWEVIFTGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
Y+ I +GG+ L+ + L+ + + ++ + I P
Sbjct: 146 YM--NPS-CSFIVSGGEALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITP 192
Query: 195 ELIQCLKEAG 204
EL L +
Sbjct: 193 ELADKLSKIR 202
>gi|325263702|ref|ZP_08130435.1| radical SAM protein, family [Clostridium sp. D5]
gi|324030740|gb|EGB92022.1| radical SAM protein, family [Clostridium sp. D5]
Length = 308
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 30/147 (20%)
Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
R C E + + K + + + +AY+Q + + + RL+++
Sbjct: 62 RACSISEQIAAGKRELSGKRPVHSYIAYLQAYTNTYAPVC-----------RLEELYMEA 110
Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYI--AIHANHP--------- 216
V+IL +R P + ++++ L KPV+I + HP
Sbjct: 111 IADPEVRILSIATR-----PDCLGTDVLELLGRINRIKPVWIELGLQTIHPATARYIRRG 165
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVL 243
YE A+ L + GI ++ ++L
Sbjct: 166 YEL-PVFEKAVRDLRSMGITVIVHTIL 191
>gi|312886291|ref|ZP_07745904.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
18603]
gi|311301236|gb|EFQ78292.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
18603]
Length = 440
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
R LK+ C C FC G+ + + E A A I S + E++ TG
Sbjct: 142 RTRTFLKVQDGCDYSCTFCTIPLARGASRSDTV-ESVLEQARA-IAA-SGVKEIVLTGVN 198
Query: 152 -GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
GD I + ++K L + + +R S ++P + E+I+ K
Sbjct: 199 IGDYGIRDGKREHKFFDLVKALDEVDGIDRIRISS----IEPNLLTDEIIE-FVAVSKRF 253
Query: 208 YIAIHA 213
H
Sbjct: 254 APHFHI 259
>gi|288932367|ref|YP_003436427.1| radical SAM protein [Ferroglobus placidus DSM 10642]
gi|288894615|gb|ADC66152.1| Radical SAM domain protein [Ferroglobus placidus DSM 10642]
Length = 506
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 67 LNILPEEREDPIGDNNHSPLK-GI--VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQK 122
E+P D P G+ H+ +L + L + C + C +CF ++K
Sbjct: 59 FGADGYGIENPQVDEVDCPFTCGLCRAHKSHTALLNIVLTNRCNIACWYCF----FYAKK 114
Query: 123 GTVLSSKDTEAALAYIQEKSQI-----WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHV 175
+ E ++ + V TGG+P L L +++K + I HV
Sbjct: 115 AGYVYEPTIEQIRHMVRVAKNLKPVGCNAVQLTGGEP-TLRDD-LVEIVKAIKEEGIDHV 172
Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
Q+ R+ +PEL+ L+EAG
Sbjct: 173 QLNTNGLRLAE------DPELVMSLREAGVNTI 199
>gi|261417376|ref|YP_003251059.1| hypothetical protein Fisuc_2997 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373832|gb|ACX76577.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328091|gb|ADL27292.1| radical SAM protein, TIGR01212 family [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 24/146 (16%)
Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI---LSHKRLQ 163
C +C R +S + E YI I P + L+
Sbjct: 45 CSYCNNRSFSPVFDEAKVSIQ--EQLKKYIPKLRDKYPNAGILAYLQPYTNTHAPLEHLR 102
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFS- 220
+++ + K + L +R P + E I+ L E KP+ + I + +
Sbjct: 103 EIIDPIIKHKEIAGLAIGTR-----PDCLEDEKIEYLAELNHKKPIIVEIGLQTANDLTL 157
Query: 221 ---------EEAIAAISRLANAGIIL 237
E A+ R AG+ +
Sbjct: 158 AGINRRHTLAEFEDAVKRCQAAGLTV 183
>gi|238783774|ref|ZP_04627793.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC
43970]
gi|238715325|gb|EEQ07318.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC
43970]
Length = 394
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 26/170 (15%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQE 140
S K I H I+LK+ C + C +C+ + + +S+K+ E + ++Q
Sbjct: 5 SSKKSIQHL---EIILKISERCNINCDYCYVFNKGNSIADNSPARISNKNIEQLVYFLQR 61
Query: 141 -----KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINP 194
++ F GG+PL++ + + L + + + + I+
Sbjct: 62 ACLEYDIATLQIDFHGGEPLLMKKENFASMCDQLTTADYGRSNISLALQTNGTL---IDD 118
Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEFSEE-------AIAAISRLANA 233
E I ++ V I+I H N + + + + L NA
Sbjct: 119 EWISLFEQYLVYVSISIDGPKHINDRHRLDTKGRSTYEGTVRGLRMLQNA 168
>gi|153003729|ref|YP_001378054.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp.
Fw109-5]
gi|152027302|gb|ABS25070.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp.
Fw109-5]
Length = 351
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 26/209 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ L C C +C +LS + + V TGG+P +
Sbjct: 45 VSLTDRCNFRCTYC--SPAAHEPPDALLSRAELARLFRLFAA-LGVRRVRLTGGEPTLRK 101
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
+++ ++ + + R+ EL++ + AG + +++ P
Sbjct: 102 DVV--ELVADAAGTPGIEDVAITTNG-----HRL-DELVEPFRGAGLGALNVSLDTLAPE 153
Query: 218 EFSEEAIAAISRLA-NAGII--------LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
+ A +GI L +V++ G+N+D +A+L+R + P
Sbjct: 154 RLRGVSGQAARLERILSGIDAAAGKFRSLKINTVVMPGVNED--EVADLVRYAWDRGALP 211
Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
++ A G + + E ++ +
Sbjct: 212 RFIEQMPFAGGEV---VPLAEVRRRLEEA 237
>gi|78046661|ref|YP_362836.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78035091|emb|CAJ22736.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 343
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
P+ P+ D PL+ + L ++ C C +C + V G
Sbjct: 6 RPDLVTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57
Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LS E + + +V TGG+PL+ L ++ L I+ ++ L
Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107
>gi|315185591|gb|EFU19360.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Spirochaeta thermophila DSM 6578]
Length = 240
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C + C +C E+V L ++ A L + + + V+FTGG+PL+
Sbjct: 24 VLFTGGCNLRCPYCHNPELVEGDSEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79
Query: 159 HKRLQKVLKTLRYI 172
L +++ +R +
Sbjct: 80 KGFLPSLIEEVRGM 93
>gi|309777995|ref|ZP_07672937.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308914284|gb|EFP60082.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 472
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI+ L L + C C +C + LS ++ + +Q+
Sbjct: 77 QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLSQEEIRQEVIALQDMGHKR 136
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ TG DP+ + + + ++T+ IKH
Sbjct: 137 LALETGEDPVHSPIEYVLESIRTIYDIKH 165
>gi|300311209|ref|YP_003775301.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
seropedicae SmR1]
gi|300073994|gb|ADJ63393.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
seropedicae SmR1]
Length = 393
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 55 PI--ARQFIPQKE--ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
PI RQ P E L + + + D+ PL + + + C C
Sbjct: 29 PIVDYRQAFPASEAGRLAPMAVQPTGWLSDSLGRPLHDLR--------ISVTDRCNFRCV 80
Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQK 164
+C +++ Q +L+ ++ A + ++ TGG+PL+ + + L
Sbjct: 81 YCMPKDVFDKQYQFLPHSDLLTFEELTRVAAQFVAH-GVRKIRLTGGEPLLRKNIETLIG 139
Query: 165 VLKTLR 170
+L LR
Sbjct: 140 MLAALR 145
>gi|294338308|emb|CBJ94347.1| hypothetical phage protein (Radical SAM family) [Campylobacter
phage CPt10]
Length = 318
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 16/137 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154
R + C C +C S+ ++ ++ + GG+P
Sbjct: 42 RAAIMTTDKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 101
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ L L + +K V IL + + LKE + +
Sbjct: 102 LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 148
Query: 215 HPYEFSEEAIAAISRLA 231
H + + + I RL
Sbjct: 149 HASQIN--SNQYIERLK 163
>gi|294627927|ref|ZP_06706506.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292597841|gb|EFF41999.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 343
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
+ RY P R L L ++ C C +C + V G LS E +
Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ +V TGG+PL+ L ++ L I+ ++ L
Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107
>gi|254479764|ref|ZP_05093042.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
12653]
gi|214034296|gb|EEB75092.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
12653]
Length = 429
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C YC +C G + ++ + E E++ TG
Sbjct: 134 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 190
Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
L + L V+K + ++ ++ +R S P + + EL K
Sbjct: 191 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 246
>gi|253576867|ref|ZP_04854192.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843734|gb|EES71757.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon
786 str. D14]
Length = 478
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLK----LLHVCPVYCRFCFRREM 117
EE +L +D + + + + + R Y +RI+L + + C C +C ++
Sbjct: 49 SAEEAAVLLNVEDDVLLEEIYHAAREVKERIYGNRIVLFAPLYVSNYCVNNCEYCGYKQS 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
L+ ++ + +Q+ + G DP + +L+ + I V++
Sbjct: 109 NRGMVRRRLNREELIREVEVLQQLGHKRLALEAGEDPEHCP---IDYILECIETIYSVKV 165
>gi|298529802|ref|ZP_07017205.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511238|gb|EFI35141.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 360
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 32/202 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
+ ++ C + C C G + DT A + I Q+ VIFTGG+P
Sbjct: 20 VAWEVTRSCNLACSHCRAEAHPEPYPGEL----DTAQARSLIDTFPQVGNPVVIFTGGEP 75
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKP-VYIAI 211
L+ + L Q LR ++ P I PE + +K +G I+I
Sbjct: 76 LLRPD------IFELISYADSQGLRC-----VMAPNGTLITPENAKEIKSSGIQRCSISI 124
Query: 212 HANHPYEFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
E E+++A I L +AG+ + + K D+ + ++
Sbjct: 125 DGPTAQEHDLLRGVPGAFEQSMAGIEYLKSAGVEFQINTTVTK---DNLDKFKDIFNLAR 181
Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284
+L +++ + R
Sbjct: 182 DLGAVAWHIFMLVPTGRGADLR 203
>gi|169825978|ref|YP_001696136.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
gi|168990466|gb|ACA38006.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Lysinibacillus
sphaericus C3-41]
Length = 501
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155
CP C +C F +GS + + + +++ + +I + + GG P
Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKNNNMKITSIYWGGGTPT 242
Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+ + + +T+ + + +R + V P I PE ++ LK+ G + +
Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREIT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298
Query: 214 NHPYEFSEEAIAAISR 229
P +++E + AI R
Sbjct: 299 --PQSYTDETLKAIGR 312
>gi|116619443|ref|YP_821599.1| radical SAM domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116222605|gb|ABJ81314.1| Radical SAM domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 224
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ C + C +C +GT L+ E L + V+ TGG+P+I
Sbjct: 22 VFIRTSGCNLRCSWCDTPYTSWRPEGTDLT---LEQILDEVGAHPA-RHVVVTGGEPMIA 77
Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDP 189
+ + + LR H+ I + + +P
Sbjct: 78 PD--IVALTQRLRARNLHITIETAGT---VFEP 105
>gi|11499262|ref|NP_070500.1| acetolactate synthase, small subunit, putative [Archaeoglobus
fulgidus DSM 4304]
gi|2648892|gb|AAB89585.1| acetolactate synthase, small subunit, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 137
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-KPY-YLHHPDLAAGT 280
A L AG + +VL + D P L + + + + Y Y +
Sbjct: 51 TDEAYQALKEAGFTVRLTNVLAVEVEDKPGALHRIAKALGDAGVNIDYVYAFTSEKHKAL 110
Query: 281 SHFRLTI-EEGQKIVASL 297
FR+ E+ ++++ L
Sbjct: 111 IIFRVDDREKAKEVLEKL 128
>gi|61657478|emb|CAI44390.1| hypothetical protein [Thermotoga sp. KOL6]
Length = 397
Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 31/161 (19%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----------IQEKSQIWEVI 148
+++ CP C +C + G V+ +D + L Y +
Sbjct: 143 IEISRGCPFSCAYC----QTPNIAGRVVRHRDVDVILHYANLGVKHGRKLARFIASNSFG 198
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKP 206
+ + + + ++++++L LR + ++ + F + V P+ + E++ +K+ +
Sbjct: 199 YGSKNGVTPNVEKIEELLFGLRRVG-IEEIYFGTFPSEVRPESVTDEVLSVIKKYVNNRS 257
Query: 207 VYIAIHA-----------NHPYEFSEEAIAAISRLANAGII 236
V I + H E + AI ++A G
Sbjct: 258 VVIGAQSGSDRVLKIIKRGHTVE---QVEEAIEKIAAHGFT 295
>gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris TIE-1]
gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris TIE-1]
Length = 344
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 29/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M + +L+ ++ + + + ++ TGG+PL+
Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + ++++L H++ L S++ R EL C + V ++
Sbjct: 86 RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135
Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ P EF A I+ AG+ + SV+LKG N+D
Sbjct: 136 LDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNED 183
>gi|239948170|ref|ZP_04699923.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922446|gb|EER22470.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 400
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 11/106 (10%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDPLILSHKR 161
C C +C V K E + Y I + I + F GG P +++
Sbjct: 31 CLSXCPYCDFNSHVAGNIDHNQWLKSYETEIEYFKAIIQNKYIKSIFFGGGTPSLMNPVI 90
Query: 162 LQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
++ ++ L I + + + +P E + K AG
Sbjct: 91 VEGIINKISNLAIIDNQTEITIET-----NPTSFETEKFKAFKSAG 131
>gi|115954674|ref|XP_001192785.1| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
purpuratus]
Length = 258
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ + ++
Sbjct: 61 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 119
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PL+ + ++++ LR ++ ++ +
Sbjct: 120 TGGEPLVRKD--IVEIIEGLRELEGLKQI 146
>gi|115709894|ref|XP_783948.2| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
purpuratus]
gi|115954658|ref|XP_001192455.1| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
purpuratus]
Length = 669
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ + ++
Sbjct: 91 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 149
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PL+ + ++++ LR ++ ++ +
Sbjct: 150 TGGEPLVRKD--IVEIIEGLRELEGLKQI 176
>gi|52143547|ref|YP_083282.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
gi|51977016|gb|AAU18566.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
Length = 342
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y E + +FTG
Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115
Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
I H + + AI L I + +V+ D E +A L+
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175
Query: 261 F 261
Sbjct: 176 L 176
>gi|78221644|ref|YP_383391.1| radical SAM family protein [Geobacter metallireducens GS-15]
gi|78192899|gb|ABB30666.1| Radical SAM [Geobacter metallireducens GS-15]
Length = 293
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 21/122 (17%)
Query: 97 ILLKLLHVCPV-YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVIFT 150
++ ++ C +C +C G K + K E A I + V
Sbjct: 18 LIFQITIGCSQNHCAYC------GMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLA 71
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKP 206
GD L+ + L +L L ++ R S P + + ++ L+E
Sbjct: 72 DGDALVYPFEGLCAILDRLAATFPNLT--RVGSYA---SPNSLTTKSVDELRMLREKRLR 126
Query: 207 VY 208
+
Sbjct: 127 IV 128
>gi|309791023|ref|ZP_07685560.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
gi|308226938|gb|EFO80629.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
Length = 461
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WE 146
Y +R+ L CPV C FC + G ++++ + I+ +
Sbjct: 184 ARNYSERLPLLATKGCPVGCNFCCTPRIYG----KTFRIRESDQMIDEIKAHQNFAGKRD 239
Query: 147 VIFTGGD 153
V F+ D
Sbjct: 240 VRFSFMD 246
>gi|258591742|emb|CBE68043.1| Putative pqq coenzyme synthesis protein (pqqE) [NC10 bacterium
'Dutch sediment']
Length = 371
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 74/197 (37%), Gaps = 33/197 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFTGG 152
P I +L C + C C R E + ++ LS+ + +A LA ++ + +++ TGG
Sbjct: 17 PKLIYWELTRACDLVCTHC-RAEAIAARDPFELSTAEAKALLADLRAFGEPPPQLVMTGG 75
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPV 207
DPL ++L+ R I + P P + E I L E G +
Sbjct: 76 DPLKRPD--FFELLRHGRSIGMPVSV-----APSGTP-LLTAEAIAALAENGVMSMSLSI 127
Query: 208 YIAIHANHPY-----EFSEEAIAAISRLANAGIILLSQSVLLKGIND--DPEILANL--- 257
A +H E + AI + A I L Q IN PE + L
Sbjct: 128 DGATAESHDRFRGVAGCFETTMRAIEAVRAAAIPL--Q------INTLVTPETMPELPGV 179
Query: 258 MRTFVELRIKPYYLHHP 274
R +L I + L +
Sbjct: 180 FRLLRDLGIMRWSLFYL 196
>gi|283777943|ref|YP_003368698.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
gi|283436396|gb|ADB14838.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
Length = 446
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 20/158 (12%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152
L + C + C FC V + + E I +Q ++ GG
Sbjct: 53 LYIHIPFCEMRCGFCNLFTYSQPADDWVANYLSALGRQMEVVAEQIPA-AQFAQLALGGG 111
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--PQRINPELIQCLKEAGK-PVYI 209
P L L ++L+ L+ V + + V+ P + E L+ G + +
Sbjct: 112 TPTFLQTAELAQLLEQLKR---VLDVPLGNLPISVEASPATTDDEKFALLRHYGVTRLSL 168
Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLS 239
I + + ++ AI R+ AG +L+
Sbjct: 169 GIQSFDADDLGAIGRPQKHDDVTRAIERIRRAGFPILN 206
>gi|253580177|ref|ZP_04857444.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848696|gb|EES76659.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 308
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 17/142 (11%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+ L+K+ + L +R + P+ + L+ L + KPV+I +
Sbjct: 97 YAPVEYLEKIFTEAISHPKIVALSIGTRPDCLSPEIVT--LLSRLNKH-KPVWIELGLQT 153
Query: 216 PYEFSE----------EAIAAISRLANAGIILLSQSVL-LKGIN--DDPEILANLMRTFV 262
+E + A+ RL I ++ ++L L G N D E + L +
Sbjct: 154 IHESTARYIRRGYPLCVFDDAVKRLRKENIEVIVHTILGLPGENTADILETMEYLNHMDI 213
Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284
+ IK LH + +
Sbjct: 214 Q-GIKLQLLHVLRGTDLAADYE 234
>gi|251779835|ref|ZP_04822755.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084150|gb|EES50040.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 444
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q V T + + +
Sbjct: 86 RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222
+I+++H V NPEL ++ LK F+
Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168
Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249
+ + +L +AGI + +Q V + IN+
Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195
>gi|268317762|ref|YP_003291481.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
DSM 4252]
gi|262335296|gb|ACY49093.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
DSM 4252]
Length = 363
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAA 134
DP G R + + L+ C + CR+C E + + +L+ ++
Sbjct: 31 DPARSEADVLTDGFGRR-HTYLRISLIEHCNLRCRYCMPEEGLDWTPPEHLLTDEEIIR- 88
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
LA + + ++ TGG+PL+ K +++++ L + ++ L + + P
Sbjct: 89 LARLFVSQGVTKIRLTGGEPLL--RKGIERIVAELARLPGLRALAMTTNGL------LLP 140
Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLL 244
+ + L+ AG + I++ P F E+ + AI G L V+L
Sbjct: 141 KKLDRLQAAGLTQLNISLDTLRPERFEILTRRKGFEQVLRAIDLAIARGYRPLKVNCVVL 200
Query: 245 KGINDD 250
+G N+D
Sbjct: 201 RGFNED 206
>gi|212633899|ref|YP_002310424.1| arylsulfatase regulator [Shewanella piezotolerans WP3]
gi|212555383|gb|ACJ27837.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Shewanella
piezotolerans WP3]
Length = 405
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 39/175 (22%)
Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYI-Q 139
SP KGI I+LK+ C + C +C F+ + V+ K + + +I +
Sbjct: 3 SPTKGID------IVLKISERCNLACTYCYFFFQEMDTFKENTAVIKMKTIDQLVEFINK 56
Query: 140 EKSQIW----EVIFTGGDPLILSHKRLQKVLKTLRY-IK---HVQIL--RFHSRVPIVDP 189
++ + GG+PL++ + + LR I HV ++ +
Sbjct: 57 GYDELGIQSINIGLHGGEPLLIKKEHFSSICNRLRENITPEVHVNLMCQTNGT------- 109
Query: 190 QRINPELIQCLKEAGKPVYIAI----HANHPYEFS-------EEAIAAISRLANA 233
++ E I ++ V ++I H N Y ++ + I L A
Sbjct: 110 -LVDSEWISIFEQHKVNVGVSIDGPKHINDKYRIDHNGKGSYDQTVRGIKLLQQA 163
>gi|188590250|ref|YP_001920547.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
gi|188500531|gb|ACD53667.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
Length = 444
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C FCF ++ + T+ D ++ L+++Q V T + + +
Sbjct: 86 RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135
Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222
+I+++H V NPEL ++ LK F+
Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168
Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249
+ + +L +AGI + +Q V + IN+
Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195
>gi|251799231|ref|YP_003013962.1| radical SAM protein [Paenibacillus sp. JDR-2]
gi|247546857|gb|ACT03876.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
Length = 278
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 30/163 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAY-------IQEKSQIWEV 147
L C C++C+ REM + + + + AA Y ++ I
Sbjct: 29 LNPYSGCSFACKYCYVREMPIQKFKQIPWGEWVDIKTNAADIYRNEVNKLRRKNKPINIF 88
Query: 148 IFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ + DP + +++L+ + +++ +R P++ R + +LI LK+
Sbjct: 89 MSSATDPYQPIEREAGITRRILREMLEAPP-DLIQIQTRSPLI---RKDLDLIVLLKDKC 144
Query: 205 KPVYIAIHANHPYE-----FSEEA------IAAISRLANAGII 236
+ + E F+ A + A+ L +AGI
Sbjct: 145 EVLVSMT-VETDREDMKRLFAPYAPGIKLRLKALKELHDAGIT 186
>gi|114707677|ref|ZP_01440572.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi
HTCC2506]
gi|114536921|gb|EAU40050.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi
HTCC2506]
Length = 372
Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 41/174 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M K +L+ ++ + + ++ TGG+PL+
Sbjct: 57 VSVTDRCDFRCVYCMAEDMEFLPKRDLLTLEELDRLSTTFIA-KGVKKLRLTGGEPLV-- 113
Query: 159 HKRLQKVLKTLRYIKHVQI---------------LRF-------HSRVPIVDPQRINPEL 196
K + ++++L H++ RF R V ++ +
Sbjct: 114 RKNIMYLIRSLSR--HLETGALEELTLTTNGSQLKRFAKDLADAGVRRLNVSVDTLDADK 171
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G E ++ + I AG+ + +V LKG ND
Sbjct: 172 FRRITRWG-------------EL-KKVMEGIDAAQEAGLHVKLNAVALKGFNDS 211
>gi|148642712|ref|YP_001273225.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
smithii ATCC 35061]
gi|148551729|gb|ABQ86857.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
smithii ATCC 35061]
Length = 234
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
L+ + CP+ CR+C E++ K+ A +I V+ +GG+PL
Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEINDAADFIDA------VVISGGEPL 72
Query: 156 ILSHKRLQ 163
+ S ++
Sbjct: 73 VQSDAVIE 80
>gi|222056745|ref|YP_002539107.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. FRC-32]
gi|221566034|gb|ACM22006.1| hopanoid biosynthesis associated radical SAM protein HpnH
[Geobacter sp. FRC-32]
Length = 332
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 35/189 (18%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+YP ++L+ H+C + C C R ++S E L + E V TG
Sbjct: 25 KYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LEECLNSVDECPAP-VVTVTG 80
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI---QCLKEAGKPVY 208
G+P L + L+ KH+ L+ K P +
Sbjct: 81 GEPF-LYPHIFDLIDGVLKRGKHI--------------YLCTNALLLEKALDKMRPHPNF 125
Query: 209 -IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANL 257
+ +H H E AI + A G + + + + K D + L
Sbjct: 126 TLNVHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEML 183
Query: 258 MRTFVELRI 266
E+ +
Sbjct: 184 FSKLEEIGV 192
>gi|62734457|gb|AAX96566.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group]
gi|77552671|gb|ABA95468.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group]
Length = 1004
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 20/102 (19%)
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
RL V LR H R P + + L+ G P+++ H
Sbjct: 131 PPTRLAYYAAA------VGRLRLHRR-----PASVAADWC--LRLHGWPIWLVGHTTVVG 177
Query: 218 EF----SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
++AA L G + LL G+ D
Sbjct: 178 RLRLHHRPASVAADWCLRLHGWPI---MPLLLGVYDFAADWC 216
>gi|323699272|ref|ZP_08111184.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. ND132]
gi|323459204|gb|EGB15069.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio desulfuricans
ND132]
Length = 442
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 21/122 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
P LK+ C CRFC R +L+ A Q+ E+I
Sbjct: 144 PSYAYLKVSEGCSHNCRFCTIPSIRGPHRSWPVDFLLNEARLLAG--------QVPEIIV 195
Query: 150 TGGDP-LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D S L +L+ L I + LR + P + L+ L++ G
Sbjct: 196 VGQDSTAYGSDLGPGNDLPTLLRGLAAIPDLHWLRI----MYLYPAGLTESLLGLLRDTG 251
Query: 205 KP 206
P
Sbjct: 252 AP 253
>gi|309785707|ref|ZP_07680338.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
gi|308926827|gb|EFP72303.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
Length = 201
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
R++ + C +C FC F + + ++ E A + + + + I V
Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89
Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
F GG P LS L +++ TLR + + RV D +RI+
Sbjct: 90 FGGGMPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138
>gi|316934848|ref|YP_004109830.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris DX-1]
gi|315602562|gb|ADU45097.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris DX-1]
Length = 344
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 21/164 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL--- 155
+ + C C +C +M + +L+ ++ + + + ++ TGG+PL
Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRSDLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLVRR 87
Query: 156 -ILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
++S + L + L + + + + S++ R EL C V +
Sbjct: 88 NMMSLVRSLSRHLDS-GALDELTLTTNGSQL-----ARFAAELADC-GVRRVNVSLDTLD 140
Query: 212 -----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
E +A I AG+ + +V+LKG N+D
Sbjct: 141 PVEFRRITRWGELDR-VLAGIDAARAAGLAVKINTVVLKGCNED 183
>gi|167748881|ref|ZP_02421008.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
gi|317470277|ref|ZP_07929671.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
gi|167651851|gb|EDR95980.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
gi|316902250|gb|EFV24170.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
Length = 445
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 18/119 (15%)
Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
LK+ C C +C R + K+ + + V+
Sbjct: 146 AYLKIAEGCDKRCSYCIIPKIRGRF------RSVPMKELLKSARELAASGVTELVLVAQE 199
Query: 153 DPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
L K L +LK L ++ ++ +R P+ I ELI+ +KE K V
Sbjct: 200 TTLYGKDLTGKKELPTLLKELCGVEGIEWIRL----LYCYPEEITDELIRTIKEEEKVV 254
>gi|166032752|ref|ZP_02235581.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC
27755]
gi|166027109|gb|EDR45866.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC
27755]
Length = 307
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213
L+K+ ++IL +R P + +++ L E KPV+I +
Sbjct: 98 YAPVDYLRKIFTEAIMHPDIRILSVATR-----PDCLGEDILNLLHELNQIKPVWIELGL 152
Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKG--INDDPEILANLMRT 260
+E + A+ RL GI ++ ++L L G I + E + L
Sbjct: 153 QTIHEDTASYIRRGYDLPVFEHALKRLRQMGIPVIVHTILGLPGEDIKRNLETMHYLNEH 212
Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285
++ IK LH +
Sbjct: 213 HIQ-GIKLQLLHVLKYTDLADDYLT 236
>gi|70729189|ref|YP_258925.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
Pf-5]
gi|68343488|gb|AAY91094.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
Pf-5]
Length = 322
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+
Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLMEAAGIERLRITGGEPLV 72
Query: 157 LSHKRLQKVLKTLRYI 172
+L+ + + +
Sbjct: 73 SP--KLEAFMGAVGRM 86
>gi|320007246|gb|ADW02096.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 475
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 29/172 (16%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQI 144
R L + C V C FC +G+ + A + + + +
Sbjct: 43 TERKDALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDDAPV 102
Query: 145 W--EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPI---VDPQRINPEL 196
F GG P L+ L+++ R S VP+ P +
Sbjct: 103 RFTSAAFGGGTPTFLTAGELERLCDIAEK-------RMGADLSAVPLSVETSPSTATADR 155
Query: 197 IQCLKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLS 239
+ L + G V I + + E E AA+ R+ AGI +L+
Sbjct: 156 LAVLADRGTTRVSIGVQSFVDAEARAAVRPQHRSEVEAALGRIREAGIPVLN 207
>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
cholodnii SP-6]
Length = 487
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 23/136 (16%)
Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
C C +C ++V G + +++ E + ++ ++ F GG P LS
Sbjct: 91 CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150
Query: 160 KRLQKVLKTLRYIKHVQ-----ILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
L +++ LR H++ + DP+ ++ E + LKE G V +
Sbjct: 151 AELDRLMGELRRHFHIEPHGEYSIEI-------DPRTVSRERLAHLKELGFNRVSFGV-- 201
Query: 214 NHPYEFSEEAIAAISR 229
+F + A+ R
Sbjct: 202 ---QDFDADVQKAVHR 214
>gi|109069068|ref|XP_001083150.1| PREDICTED: condensin-2 complex subunit G2 isoform 3 [Macaca
mulatta]
gi|109069070|ref|XP_001083395.1| PREDICTED: condensin-2 complex subunit G2 isoform 5 [Macaca
mulatta]
gi|297289763|ref|XP_002803587.1| PREDICTED: condensin-2 complex subunit G2 [Macaca mulatta]
Length = 1143
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ L+ G ++IH H F E +S L +
Sbjct: 798 DLESL-LQT--PGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 850
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 908 RSLGIMQTVKG 918
>gi|17533767|ref|NP_494067.1| hypothetical protein F36H5.8 [Caenorhabditis elegans]
gi|13592422|gb|AAK31519.1| Hypothetical protein F36H5.8 [Caenorhabditis elegans]
Length = 648
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYY-----LHHPDLAAGTSHF 283
+QSV+LKGI P + + F E+ P Y + + D T +F
Sbjct: 577 YNQSVILKGIETRPAVRRSEHHKFDEIFTLPQYSRTLDITNCDGVEATVYF 627
>gi|333029245|ref|ZP_08457306.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
gi|332739842|gb|EGJ70324.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
Length = 438
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
R LK+ C +C +C F R + + ++ +AA +I
Sbjct: 148 RTRFFLKVQDGCDYFCTYCTIPFARGFSRNGSIESIVNQAKQAARD---GGKEIVITGVN 204
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GD +++ ++K L ++ ++ R S ++P + E+I+ + ++ +
Sbjct: 205 TGDFGKTTNETFIDLVKLLDEVEGIERFRISS----IEPNLLTDEIIEFVAQSKR---FM 257
Query: 211 IHA 213
H
Sbjct: 258 PHF 260
>gi|253996369|ref|YP_003048433.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylotenera
mobilis JLW8]
gi|253983048|gb|ACT47906.1| coenzyme PQQ biosynthesis protein E [Methylotenera mobilis JLW8]
Length = 411
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
N+ + P +L ++ + CP++C FC+ L+++ AL
Sbjct: 19 HAQNNGVAASVTQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDA 78
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
++ I ++ +GG+PL+ +++++ R +
Sbjct: 79 RKLGAI-QLGISGGEPLLRDD--IEEIVVEARKL 109
>gi|155241762|gb|ABT18044.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
Length = 391
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 29/121 (23%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQ--EKSQIWEVI 148
Y + + C ++C C S + + + A+ +I + ++
Sbjct: 35 YGPVVAWNVSRTCNLHCIHC------YSDSDEIDYPGELTTQEAIKFIDELADFNVPVLL 88
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203
+GG+PL+ + L + +R + I P++ + +K+
Sbjct: 89 LSGGEPLMRPD------IFELVAHASKRNVRVTFSTNGT--------LITPDVAKEIKKY 134
Query: 204 G 204
G
Sbjct: 135 G 135
>gi|34497708|ref|NP_901923.1| ribosomal RNA large subunit methyltransferase N [Chromobacterium
violaceum ATCC 12472]
gi|81655644|sp|Q7NVT9|Y2253_CHRVO RecName: Full=Probable RNA methyltransferase CV_2253
gi|34103564|gb|AAQ59925.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 352
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 73/217 (33%), Gaps = 42/217 (19%)
Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
C V C FC M G L S + A +A + + +V+F G G+P
Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPA----HN 158
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHANHPY- 217
++ VL+ ++++ + + R+ L Q E + +++H
Sbjct: 159 MENVLEAIQWLGTDGN--IGHKNLVFSTVGDARVFERLPQL--EVKPALALSLHTTRADL 214
Query: 218 ---------EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE- 263
+ E A +R G + Q LL G+ND E + R
Sbjct: 215 REQLLPRAPRIAPAELVELGEAYAR--RVGYPIQYQWTLLAGVNDSQEEMDAAARLLKGK 272
Query: 264 ---LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
L I PY + G R + E Q I L
Sbjct: 273 YGVLNIIPY-----NSVEGDRFQRPSSERVQAIKRYL 304
>gi|32475869|ref|NP_868863.1| MiaB protein- tRNA-thiotransferase [Rhodopirellula baltica SH 1]
gi|81659862|sp|Q7ULM9|MIAB_RHOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|32446412|emb|CAD76240.1| probable MiaB protein-putative tRNA-thiotransferase [Rhodopirellula
baltica SH 1]
Length = 479
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
E DP+ D P + L++ C +C +C R G ++S
Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198
Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
A ++ + G D + +L+ L I ++ + +
Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250
Query: 185 PIVDPQRINPELIQCLKEAGK 205
P+ + L++ +++ K
Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271
>gi|83854736|ref|ZP_00948266.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
NAS-14.1]
gi|83842579|gb|EAP81746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
NAS-14.1]
Length = 439
Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
D ++ LKG R L + C +C FC R V VL+
Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184
Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E + + Q + V G D L +++K L I ++ +R+
Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238
Query: 182 SRVPI 186
+ P
Sbjct: 239 TSHPN 243
>gi|330835444|ref|YP_004410172.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329567583|gb|AEB95688.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 369
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
YP ++ + C + C C+ G+Q+ L A+ + ++ +GG
Sbjct: 27 YPSVLVFNVTRNCNLRCLHCYSS--SGTQQFYDLPLSVWIEAVKQ-ASDMGVKHILLSGG 83
Query: 153 DPLILSHKRL 162
+PL L
Sbjct: 84 EPLARRDLSL 93
>gi|325297732|ref|YP_004257649.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
salanitronis DSM 18170]
gi|324317285|gb|ADY35176.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
salanitronis DSM 18170]
Length = 433
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 20/115 (17%)
Query: 97 ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147
LK+ C C +C V +L I + E+
Sbjct: 138 AYLKISEGCDRKCAYCAIPIITGRHVSRPMDEILDEVRLLVSQGVKEFQVIAQ-----EL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
+ G D + + L ++++ + I V+ +R H P R +L + ++E
Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAAIPGVKWIRLH----YAYPARFPKDLFRVMRE 241
>gi|294011401|ref|YP_003544861.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
UT26S]
gi|292674731|dbj|BAI96249.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
UT26S]
Length = 334
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C M + +L+ ++ + + + TGG+PL+
Sbjct: 22 ISVTDRCDLRCRYCMAERMTFLPRDQILTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 80
Query: 159 HKRLQKVLKTLRYI-KHV 175
++ +R I +HV
Sbjct: 81 D-----IIDLVRRIGRHV 93
>gi|241764970|ref|ZP_04762968.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
2AN]
gi|241365443|gb|EER60224.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
2AN]
Length = 378
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F ++ +LS ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKDYAYLPHNALLSFEEITRLARLFMAH-GVRKIRLTGGE 102
Query: 154 PLILSH-KRLQKVLKTLRYIK 173
PL+ + + L L LR I
Sbjct: 103 PLLRKNVEELVAQLAQLRTID 123
>gi|88705524|ref|ZP_01103234.1| Molybdenum cofactor biosynthesis protein A [Congregibacter
litoralis KT71]
gi|88700037|gb|EAQ97146.1| Molybdenum cofactor biosynthesis protein A [Congregibacter
litoralis KT71]
Length = 336
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C C +C +M K VL+ ++ + A A+++ + ++ TGG+PL+
Sbjct: 22 LSVTDRCDFRCVYCMAEDMQFVPKSEVLTLEELAQVAQAFVRL--GVRKIRLTGGEPLV- 78
Query: 158 SHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+ ++++ L ++ ++ L S++ QR L Q LK+AG K + I++ +
Sbjct: 79 -RHNIMELVEQLGAMEGLEELVMTTNGSQL-----QR----LAQPLKDAGVKRLNISLDS 128
Query: 214 NHPYEFS--------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
P F E+ IA I AG + +V+++G NDD
Sbjct: 129 LQPRRFRQITRVGHLEQVIAGIDAACTAGFEGIRINAVIMRGDNDD 174
>gi|85707986|ref|ZP_01039052.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
gi|85689520|gb|EAQ29523.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
Length = 336
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 34/168 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C M K VL+ ++ + A +I + ++ TGG+PL+
Sbjct: 22 LSVTDRCDLRCTYCMPERMTFLPKREVLTLEELYDLASGFI--DRGVTKIRITGGEPLVR 79
Query: 158 SH---------KRLQKVLKTL-------RYIKHVQ-ILRFHSRVPIVDPQRINPELIQCL 200
++L + L+ L + H ++R R V ++ EL L
Sbjct: 80 RDIVDLIRALGRKLGEGLEELTLTTNATQLADHADALVRAGLRRVNVSLDTLDRELFAKL 139
Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
+ + I+ +G+ + +V LKG N
Sbjct: 140 TR--------------RDALPRVLDGIAAAKASGLKVKLNAVALKGAN 173
>gi|327480682|gb|AEA83992.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas
stutzeri DSM 4166]
Length = 381
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL+L + CP+ C FC + LS+ + +A + + ++ F+GG+P +
Sbjct: 19 LLLELTYQCPLQCVFCSNPRNFADYRREELSTDEWIDVMAQARAMGAV-QIGFSGGEPTL 77
Query: 157 LSHKRLQKVLKTLRYI 172
L+ ++ +
Sbjct: 78 RKD--LETLVAEADRM 91
>gi|325969734|ref|YP_004245926.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708937|gb|ADY02424.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 296
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 98 LLKLLHVCPVYCRFC--FRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+L + +CP+ C +C R V +S + + + + TGG
Sbjct: 19 VLFITGICPLNCFYCPVSRDRFGKDVMFINDRPVSKF-PDDIIDELDRAGS-NGLAITGG 76
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
DP+++ + ++ L L + + H + V IN + I+ L +G +
Sbjct: 77 DPIMVVDRVVE--LVRLLKDTYGRDFHIHMYTHVLN-----INEDAIKKLAGSGID-EVR 128
Query: 211 IHANHPYEFSEEAIAAISRLANAGIILL 238
IHA +P + S + + L +AGI L
Sbjct: 129 IHAVNPAQLSGKLGL-LKMLKDAGIELG 155
>gi|266621755|ref|ZP_06114690.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
13479]
gi|288866581|gb|EFC98879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
13479]
Length = 320
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 23/130 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C +C +C G + + +D A + + E++ TG
Sbjct: 25 HTRAFIKVTDGCNQFCSYCIIPYTRGRVRSRRM--EDVRAEVERLVA-GGYKEIVLTGI- 80
Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
LS + L ++ L + + +R S ++P+ I E + L
Sbjct: 81 --HLSSYGVDFREEERRTLLDLIVYLHEVDGLLRIRLGS----LEPRIITKEFAEALAAL 134
Query: 204 GKPVYIAIHA 213
K + H
Sbjct: 135 PK---VCPHF 141
>gi|167945021|ref|ZP_02532095.1| Radical SAM domain protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 275
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 99 LKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L C + C C+ GS+ L++ + +A L I+E+ V+ TGG+PL
Sbjct: 9 INLTRRCNLACAHCYMDAATREAGSEAE--LTTDEVKALLDQIRERGDDTMVVLTGGEPL 66
Query: 156 ILSHKRLQKVLK 167
+ L+ ++
Sbjct: 67 LRRD--LEALVA 76
>gi|218961411|ref|YP_001741186.1| translation initiation factor IF-1 [Candidatus Cloacamonas
acidaminovorans]
gi|167730068|emb|CAO80980.1| translation initiation factor IF-1 [Candidatus Cloacamonas
acidaminovorans]
Length = 80
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
FR+T+E G +I+ SG + YI LPG KV++ +++ +
Sbjct: 30 FRVTLENGHEIL----AHSSGKMRMNYIRILPGDKVKVELSPYDLTR 72
>gi|302343497|ref|YP_003808026.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
gi|301640110|gb|ADK85432.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
Length = 297
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
+ IL++ C C FC ++ + + E L + Q+ + + V G
Sbjct: 23 NSILIQATLGCSHNKCAFCGT---YYDKRFGIKDRQTLEQDLRFAQKHCRRQDRVFVMDG 79
Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPV 207
D LI+ + +L +R + V+ R S+ + + + ++ L+E G +
Sbjct: 80 DALIMPMAHWEWLLGQIREKLPWVR--RVGSYANSKSIAMK----SDDDLRRLRELGLGI 133
Query: 208 -YIAIHANHPY 217
Y + + HP
Sbjct: 134 LYYGVESGHPD 144
>gi|282165058|ref|YP_003357443.1| hypothetical protein MCP_2388 [Methanocella paludicola SANAE]
gi|282157372|dbj|BAI62460.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 398
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ H C + C C GS+ L S++ A + + +++ +I TGG+
Sbjct: 58 PRQVFWEVTHACNLRCLHCVTS--SGSKDNDELDSQEAFALIDRL-ADMKVFYLIITGGE 114
Query: 154 PLILSHKRLQKVLKTLRYI 172
P + +L+ LR+I
Sbjct: 115 PFLRPD-----ILELLRHI 128
>gi|257126723|ref|YP_003164837.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia buccalis C-1013-b]
gi|257050662|gb|ACV39846.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia buccalis C-1013-b]
Length = 175
Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
+ GI RY C C C + G +L+ + E I E + +
Sbjct: 31 VDGIGLRYS-----LYFAGCSHACPGCHNEYSWNPKHGNILTYEKLEEIAKEINENTLLD 85
Query: 146 EVIFTGGDPLILSHKRLQ 163
+ +GGDPL + L+
Sbjct: 86 GITISGGDPLFNPVEMLK 103
>gi|327540187|gb|EGF26778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
WH47]
Length = 479
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
E DP+ D P + L++ C +C +C R G ++S
Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198
Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
A ++ + G D + +L+ L I ++ + +
Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250
Query: 185 PIVDPQRINPELIQCLKEAGK 205
P+ + L++ +++ K
Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271
>gi|317013730|gb|ADU81166.1| hypothetical protein HPGAM_01600 [Helicobacter pylori Gambia94/24]
Length = 418
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221
>gi|297379507|gb|ADI34394.1| RNA modification enzyme, MiaB family [Helicobacter pylori v225d]
Length = 418
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221
>gi|291541239|emb|CBL14350.1| DNA repair photolyase [Roseburia intestinalis XB6B4]
Length = 326
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)
Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ + C C +C R + + + E AL ++ +I TG
Sbjct: 54 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109
Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
DP + +RL +L L I + + ++ RI + +L+ + E
Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162
Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
K + + + ++E I + + AGI ++ + +L IND +
Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222
Query: 254 LANLMRTFVELRIK 267
+ NL+ V+ +K
Sbjct: 223 IKNLLDACVDAGVK 236
>gi|238927738|ref|ZP_04659498.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
gi|238884454|gb|EEQ48092.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
Length = 519
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139
PL G+ HR R LK+ C +C FC G K L+ +++ E A
Sbjct: 221 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 275
Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ EV+ T G D + L +T K V+ LR S
Sbjct: 276 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 321
>gi|237738316|ref|ZP_04568797.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
gi|229420196|gb|EEO35243.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
Length = 345
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R L+++ + C C++C R +S + A+ +I E + + +G
Sbjct: 31 RGLIEISNKCIKNCKYCGIRRDNHKVDRFSMSKSEIMEAVKWIYENNYASIALQSG 86
>gi|297559674|ref|YP_003678648.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296844122|gb|ADH66142.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 410
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 35/153 (22%)
Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-----FRREMVGSQKGTVLSS 128
DP+ P + R L +HV C C +C E+V S
Sbjct: 9 DPVPSTGELPGPSLAEL-GGRPLGFYVHVPFCVTRCGYCDFNTYTAEELVSRDGTATASR 67
Query: 129 KDT-EAALAYIQ--------EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+ + A+A + E+ + + GG P +LS + L +V+ +R R
Sbjct: 68 ETYADQAIAEVALADRVLTGERPPVSTLFVGGGTPTLLSAEDLGRVVTAVRE-------R 120
Query: 180 FH--------SRVPIVDPQRINPELIQCLKEAG 204
F + +P+ + P+ + L+EAG
Sbjct: 121 FGFTPDAELTTEA---NPETVTPDYLARLREAG 150
>gi|261368422|ref|ZP_05981305.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
gi|282569543|gb|EFB75078.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
Length = 484
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C +CF + + ++S + + AL ++ S EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFAAQGKFHGEAGLMSFETGKQALDFLVAHSGTRRNLEVDFFGGEPL 163
Query: 156 ILSHKRLQKVLKTLRYIK 173
++ + ++++ R I+
Sbjct: 164 -MNFEVCKQLVAYARSIE 180
>gi|188527091|ref|YP_001909778.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470]
gi|188143331|gb|ACD47748.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470]
Length = 418
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221
>gi|157691712|ref|YP_001486174.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
gi|157680470|gb|ABV61614.1| coproporphyrinogen oxidase [Bacillus pumilus SAFR-032]
Length = 499
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 18/170 (10%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+E+ D + + L+ I Y + + + CP C +C + + +
Sbjct: 145 DEKIDLMQEIVDRQLQAIPDLYDLQQEVSIYIGIPFCPTKCAYCTFPAYAIKGQAGRVGT 204
Query: 129 K------DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRF 180
+ + +++E ++ V F GG P ++ + + + + + R V+ +R
Sbjct: 205 FLFGLHYEMQKIGDWLKEHRIKVTTVYFGGGTPTSITAEEMDLLYEEMYRSFPDVKHIRE 264
Query: 181 HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
+ V P I+P+ ++ L + I P + E + AI R
Sbjct: 265 VT-VEAGRPDTISPDKLEVLNRYHIDRISIN-----PQSYENETLKAIGR 308
>gi|126736946|ref|ZP_01752681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
SK209-2-6]
gi|126721531|gb|EBA18234.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
SK209-2-6]
Length = 440
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 17/101 (16%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
L + C +C FC R V +L ++ + + + E+ G
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIL--REAQELVE-----RGVREITLLG 202
Query: 152 GD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ L +++ L I ++ +RF + P
Sbjct: 203 QNVNAYHGAGANGDLTLAQLIWELDKIDGLERIRFTTSHPN 243
>gi|89896750|ref|YP_520237.1| hypothetical protein DSY4004 [Desulfitobacterium hafniense Y51]
gi|89336198|dbj|BAE85793.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 306
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Query: 56 IARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
+ RQ I Q E+L E + ++H G H R+ L + C + CRFC R
Sbjct: 1 MRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAAHGKKGRLHLPISPACNIQCRFCRR 60
Query: 115 -----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
G KG + + + ++ +I V G GD L
Sbjct: 61 ACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 107
>gi|260062897|ref|YP_003195977.1| molybdenum cofactor biosynthesis protein MoaA [Robiginitalea
biformata HTCC2501]
gi|88784465|gb|EAR15635.1| molybdenum cofactor biosynthesis protein (MoaA) [Robiginitalea
biformata HTCC2501]
Length = 327
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 35/225 (15%)
Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
+R++ L + C + C +C + + + L + + L I + ++
Sbjct: 6 HNRVINYVRLAVTDRCNLRCNYCMPEHGIDFARKSDLMTVEEMKRLCSILAGLGVDKIRI 65
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VY 208
TGG+P + K + + L + V+ + S ++ P I +KE G V
Sbjct: 66 TGGEPFV--RKGVMDLFAHLGGLPEVREISVTSNATLIGPH------IDRMKELGIQSVN 117
Query: 209 IAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGIN-DDPEILANLMR 259
I++ A F+ I +L ++G+ + V+LKG N D + +
Sbjct: 118 ISLDAIQAETFARITRRDEFDKVYGNIMKLVDSGMEVRINFVVLKGQNESDIYPMME-FQ 176
Query: 260 TFVELRIKPYYLHHPDLA--AGTSHFRLTIEEGQK-IVASLKEKI 301
+R++ ++ G+ F +G + + I
Sbjct: 177 REFPVRVR----FLEEMPFNGGSRDF-----KGLEWNHRKILGHI 212
>gi|194334839|ref|YP_002016699.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM
271]
gi|194312657|gb|ACF47052.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM
271]
Length = 72
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
+ F++ +E G +I+ +SG + YI LPG KV+I +++ K
Sbjct: 18 PNAQFKVELENGLEIL----AHVSGKIRMHYIRILPGDKVKVQISPYDLTK 64
>gi|315497313|ref|YP_004086117.1| miab-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
gi|315415325|gb|ADU11966.1| MiaB-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
Length = 443
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 20/148 (13%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + + G+ + R +++ + C C FC G ++ D ++
Sbjct: 139 SVRETAGHLIDGL--KDRARAYVEVQNGCDHRCTFCIIP--YGRGNSRSAAAGDVVGQIS 194
Query: 137 YIQEKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVD 188
+ EV+ TG D + S +L ++ L+++ +++ LR S +D
Sbjct: 195 RLVA-EGYNEVVLTGVD--LTSWGNDLPGQPQLGHLVARILKHVPNLKRLRLSS----ID 247
Query: 189 PQRINPELIQCL-KEAGKPVYIAIHANH 215
I+ L++ +E Y+ + H
Sbjct: 248 AAEIDDTLLRLFAEEERLAPYLHLSLQH 275
>gi|188586093|ref|YP_001917638.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|238066413|sp|B2A3C0|RIMO_NATTJ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|179350780|gb|ACB85050.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 444
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 10/113 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGG 152
+K+ C YC +C + G + + EA + ++ + G
Sbjct: 146 AYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKIEANHFIEKGSKELTLIAQDTTNYGS 205
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
D I L +L L I +R V P RI LI+ + K
Sbjct: 206 D--IYGKFSLDTLLDELATIPGDFWIR----VLYAYPTRITDSLIEVINRHEK 252
>gi|197118992|ref|YP_002139419.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197088352|gb|ACH39623.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
Length = 471
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTG 151
P +LL++ C + C FCF + L E A+A + +G
Sbjct: 91 PCSVLLEVTDRCNLQCAFCFADAGPKGTEDPSLERISWLLERAMAAAGAC----SLQLSG 146
Query: 152 GDPLILSHKRLQKVLKTLRYI 172
G+P L L ++++ R I
Sbjct: 147 GEP-TLRDD-LPEIVEAARRI 165
>gi|56963064|ref|YP_174791.1| hypothetical protein ABC1292 [Bacillus clausii KSM-K16]
gi|56909303|dbj|BAD63830.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 369
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 16/119 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ +C + C C + + L + + + E ++ TGG+P +++
Sbjct: 33 VTTTTLCNMRCEHCAVGYTLSPKDPNPLP---LDLLIRRLDEIPRLRAFSITGGEP-MMN 88
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANH 215
K +++ + L H + ++ +IN L L+ P +H +H
Sbjct: 89 MKSVREYVVPLLKYAHER----GAKT------QINSNLTMPLERYDLILPYLDVLHISH 137
>gi|238788764|ref|ZP_04632555.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
ATCC 33641]
gi|238723069|gb|EEQ14718.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
ATCC 33641]
Length = 326
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 26/181 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + LS + ++ TGG+P +
Sbjct: 17 LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRISRAFALLGT-EKIRLTGGEPSMRR 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ T+R ++ L + R+ + Q +EAG I + + P
Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+F + + I +AG + +VL++ +ND NL ++ +
Sbjct: 127 RQFHTITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR-----NLSAFLHWIKSR 181
Query: 268 P 268
P
Sbjct: 182 P 182
>gi|167038098|ref|YP_001665676.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039189|ref|YP_001662174.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter sp. X514]
gi|256750838|ref|ZP_05491722.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus CCSD1]
gi|300913216|ref|ZP_07130533.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X561]
gi|307723770|ref|YP_003903521.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X513]
gi|320116504|ref|YP_004186663.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853429|gb|ABY91838.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X514]
gi|166856932|gb|ABY95340.1| biotin and thiamin synthesis associated [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750173|gb|EEU63193.1| biotin and thiamin synthesis associated [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889901|gb|EFK85046.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X561]
gi|307580831|gb|ADN54230.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
X513]
gi|319929595|gb|ADV80280.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 466
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L + + C CR+C R Q+ L+ ++ + ++E +
Sbjct: 74 YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKLTMEEVRREVEILEEMGHKRLAV 132
Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
G DP+ + V+KT+
Sbjct: 133 EAGEDPVNCPIDYIIDVIKTIYD 155
>gi|229890666|sp|Q5LLM0|MIAB_SILPO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 439
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 75 EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
D ++ LKG L + C +C FC R V +L
Sbjct: 128 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 187
Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E + I Q + G P L ++ L I ++ +RF + P
Sbjct: 188 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 243
>gi|126649445|ref|ZP_01721686.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
gi|126593770|gb|EAZ87693.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
Length = 501
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 57/136 (41%), Gaps = 17/136 (12%)
Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155
CP C +C F +GS + + + ++++ + +I + + GG P
Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKDNNMKITSIYWGGGTPT 242
Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
+ + + +T+ + + +R + V P I PE ++ LK+ G + +
Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREVT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298
Query: 214 NHPYEFSEEAIAAISR 229
P +++E + AI R
Sbjct: 299 --PQSYTDETLKAIGR 312
>gi|95930672|ref|ZP_01313406.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684]
gi|95133324|gb|EAT14989.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684]
Length = 460
Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
I +R D + L + + C C FC FR V + + D + +A I + S E
Sbjct: 267 IAYRIRDSLYLNITNRCSNRCSFCAKFRDFHVKGHQLKLDHEPDFDEVIAAIGDPSGYEE 326
Query: 147 VIFTG-GDPLI 156
V+F G G+PL+
Sbjct: 327 VVFCGYGEPLL 337
>gi|327400377|ref|YP_004341216.1| Radical SAM domain-containing protein [Archaeoglobus veneficus
SNP6]
gi|327315885|gb|AEA46501.1| Radical SAM domain protein [Archaeoglobus veneficus SNP6]
Length = 392
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--- 146
+ P I +L C + C+ C R +QK + TE A I++ ++ +
Sbjct: 6 IREKPFIIFWELTRACMLACKHC-RAR---AQKERHPNELTTEEAFNVIEQITEFGKPYP 61
Query: 147 -VIFTGGDPLI 156
V+ TGGDPL+
Sbjct: 62 LVVITGGDPLM 72
>gi|319955886|ref|YP_004167149.1| type II restriction-modification enzyme, r and m protein
[Nitratifractor salsuginis DSM 16511]
gi|319418290|gb|ADV45400.1| type II restriction-modification enzyme, R and M protein
[Nitratifractor salsuginis DSM 16511]
Length = 1250
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 16/78 (20%)
Query: 271 LHHPDLAAGTSHFRLTI-EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
L D A G+ HF +++ +I + L+ + D G K +
Sbjct: 522 LTICDPAVGSGHFLVSVLNTILEIKSRLR----------ILFDAEGRRIK-----DYTLE 566
Query: 330 VGNGSYCITDHHNIVHDY 347
V N I D + Y
Sbjct: 567 VKNDELIIRDDEGELFGY 584
>gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70]
Length = 501
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136
I D + + + + + + CP C +C F +G ++G+V A L
Sbjct: 159 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCTFPAYAIGGRQGSV---DAFLAGLH 215
Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPI 186
Y ++E+ I + + GG P ++ + + ++ + +V+ +R + V
Sbjct: 216 YEMREVGRFLKERGINITTIYYGGGTPTSITAEEMDRLYAEMYQSFPNVERVREIT-VEA 274
Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
P I PE + LK+ + I P + +E + AI R
Sbjct: 275 GRPDTITPEKLNVLKKWNIDRISIN-----PQSYIQETLKAIGR 313
>gi|48926954|gb|AAT47516.1| putative radical SAM superfamily protein [Propionibacterium
freudenreichii]
Length = 349
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + + CP C C + ++ + E +E +I V+ TGG+P L
Sbjct: 15 ISVTNKCPARCAHCL--AESSPSERNHFTASEIEQIYLSARELEEIGLVVMTGGEPTELG 72
Query: 159 HKRLQKV 165
+ +
Sbjct: 73 DDLFEAI 79
>gi|84515221|ref|ZP_01002583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
SKA53]
gi|84510504|gb|EAQ06959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
SKA53]
Length = 436
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
L + C +C FC V S+ + L +E + + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFC-----VVPYTRGAEVSRPADRILREARELVDAGVRELTLLGQN 204
Query: 154 --PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ L ++ L I ++ +RF + P
Sbjct: 205 VNAYHGHERGLAGLIWALTEIDGLERIRFTTSHPN 239
>gi|83941259|ref|ZP_00953721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
gi|83847079|gb|EAP84954.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
Length = 439
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%)
Query: 75 EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
D ++ LKG R L + C +C FC R V VL+
Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184
Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
E + + Q + V G D L +++K L I ++ +R+
Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238
Query: 182 SRVPI 186
+ P
Sbjct: 239 TSHPN 243
>gi|269929146|ref|YP_003321467.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
[Sphaerobacter thermophilus DSM 20745]
gi|269788503|gb|ACZ40645.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
[Sphaerobacter thermophilus DSM 20745]
Length = 816
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 39/184 (21%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-------YIQEKSQIWEV 147
+R + + CP R V + S K + A Y+ ++ +
Sbjct: 348 NRTIAAIAAACPG------RERKVVGEIPFSSSRKWSALAFDDAEGRGFYVLGAPEMIQP 401
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQCLKEAGKP 206
D L R+ + RV + R NP L E P
Sbjct: 402 ALRSADGLQ---PRVDAWTER------------GLRVLLFA-YRPNPAPLPDGQSEPSLP 445
Query: 207 VYI--AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-MRTFVE 263
+ E EA I R AGI L ++ G D+P+ +A L +
Sbjct: 446 AGLIPMGLIALRDELRPEARETIERFREAGITLK----IISG--DNPDTVAALARQAGFP 499
Query: 264 LRIK 267
I+
Sbjct: 500 AGIR 503
>gi|254473488|ref|ZP_05086885.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062]
gi|211957604|gb|EEA92807.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062]
Length = 344
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + C + C +C M K VLS ++ + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDLRCVYCMSEHMTFLPKKDVLSLEELDRLCTVFIE-KGVRKIRLTGGEPLV 85
>gi|330813325|ref|YP_004357564.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486420|gb|AEA80825.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 437
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154
+ + C +C+FC V S+ + +Q + E+I G +
Sbjct: 153 ITIQEGCDKFCKFC-----VVPYTRGPEFSRCPDQIYNEVQGLVDAGTREIILLGQNVSG 207
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
L +++ + IK ++ +RF + P + +LI K
Sbjct: 208 YKNKDINLSRLIDKVASIKKLERIRFTTSHPND----FDEDLINAFK 250
>gi|315224540|ref|ZP_07866367.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
ochracea F0287]
gi|314945561|gb|EFS97583.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
ochracea F0287]
Length = 366
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
DT A ++YI++ + VI T D L + L I +++ L S+V + +P
Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKTRLNEIPNMKGLELASKVSVTEP 170
Query: 190 Q 190
Sbjct: 171 Y 171
>gi|291534395|emb|CBL07507.1| DNA repair photolyase [Roseburia intestinalis M50/1]
Length = 288
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)
Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ + C C +C R + + + E AL ++ +I TG
Sbjct: 16 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 71
Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
DP + +RL +L L I + + ++ RI + +L+ + E
Sbjct: 72 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 124
Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
K + + + ++E I + + AGI ++ + +L IND +
Sbjct: 125 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 184
Query: 254 LANLMRTFVELRIK 267
+ NL+ V+ +K
Sbjct: 185 IKNLLDACVDAGVK 198
>gi|317131836|ref|YP_004091150.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
harbinense YUAN-3]
gi|315469815|gb|ADU26419.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
harbinense YUAN-3]
Length = 324
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIW 145
+ + R D + + + C + CR+C + + L ++ +A ++ I
Sbjct: 2 ENMEKRVVDYLRVSITDRCNLRCRYCMPDKGISLVPHSETLRYEELLRVVA-CAARAGIQ 60
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++ TGG+PL+ L L+ LR IK ++ + + + PQ P+L Q EA
Sbjct: 61 KIKVTGGEPLV-RRGVLG-FLEKLRGIKGIRQVTMTTNGIL-LPQ-FLPQLAQIGVEA-V 115
Query: 206 PVYIAIHANHPYEFSEEAIAAISR---LANA----------GIILLSQSVLLKGIN-DDP 251
V + + E AI+R LA+ G+ + +V + G+N D+
Sbjct: 116 NVSLDT-------LNPETFRAITRRDGLADVLRGIDAALTLGLRIKINAVPIAGLNEDEL 168
Query: 252 EILANL 257
LA L
Sbjct: 169 PALAEL 174
>gi|260888225|ref|ZP_05899488.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena
ATCC 35185]
gi|260862059|gb|EEX76559.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena
ATCC 35185]
Length = 412
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%)
Query: 72 EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
+ D + + PL G R R LK+ C +C FC G + +L S
Sbjct: 100 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 157
Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
EAA + E++ T G D L L ++ + + ++ LR S
Sbjct: 158 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 211
>gi|256819120|ref|YP_003140399.1| carbamoyl phosphate synthase small subunit [Capnocytophaga ochracea
DSM 7271]
gi|256580703|gb|ACU91838.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
ochracea DSM 7271]
Length = 366
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
DT A ++YI++ + VI T D L + L I +++ L S+V + +P
Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKARLNEIPNMKGLELASKVSVTEP 170
Query: 190 Q 190
Sbjct: 171 Y 171
>gi|114321504|ref|YP_743187.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227898|gb|ABI57697.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
ehrlichii MLHE-1]
Length = 466
Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 16/152 (10%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L + C C FC + VG ++ + + L +I E + + + GG P
Sbjct: 65 LYAHVPFCNYACSFCCYAKKVGVEREQMARYVATLKRELEWIPEGTPVNQFFIGGGTPTA 124
Query: 157 LSHKRLQKVLKTLR-YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L L ++L + + H + H+ P+ I+ + L+ G +
Sbjct: 125 LPADLLDELLGAIAGRMPYHGDPV--HT--VEASPESISDAHLAVLQRHGVRRVSMGVQS 180
Query: 215 HPYEFSEEAIAA---------ISRLANAGIIL 237
E + + R+ +AG+IL
Sbjct: 181 LDDEVLDSVRRSHGPDLALETCRRIIDAGLIL 212
>gi|302337649|ref|YP_003802855.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
gi|301634834|gb|ADK80261.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 424
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFT 150
R + + C C FC +K + + I + + F
Sbjct: 49 RCIYIHIPYCDTICEFCNLNRTARGHTDLDAYTKYLIKEIEWYARYPYIRDGQFDAIYFG 108
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHV 175
GG P IL ++L VL+ LR H+
Sbjct: 109 GGTPTILQTEQLSLVLRALRDSFHL 133
>gi|198282884|ref|YP_002219205.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665819|ref|YP_002425085.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|229890414|sp|B7J5B2|MIAB_ACIF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890415|sp|B5ENG4|MIAB_ACIF5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|198247405|gb|ACH82998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518032|gb|ACK78618.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 451
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 14/111 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
+ + C +C FC G + S D + + E+ + E+ G +
Sbjct: 148 TAFVTIQEGCDKFCTFCVVPHTRGRE--YSRSMPDILREVRALVEQ-GVREITLLGQNVN 204
Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
++ L +L+ L I + LR+ + P + ELI
Sbjct: 205 AYRGATGLVGEGGLADLLERLARIPGLLRLRYTTSHPANL----DDELIAA 251
>gi|197287367|ref|YP_002153239.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
gi|194684854|emb|CAR46981.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
Length = 369
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 15/105 (14%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
++S ++ I+ R + L + C C+FC S + AL I
Sbjct: 77 SNSRIRVILSRKANHNTLLVTERCNNLCQFC------SQPPKNRDDSWLLDDALLAIAAF 130
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ + +GG+PL+ +K + + + I R R +
Sbjct: 131 NFDGVIGISGGEPLLYGNKFIDFIRE---------IKRLAPRTVL 166
>gi|127514323|ref|YP_001095520.1| radical SAM domain-containing protein [Shewanella loihica PV-4]
gi|126639618|gb|ABO25261.1| Radical SAM domain protein [Shewanella loihica PV-4]
Length = 292
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 33/166 (19%)
Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151
++L++ + C C FC +M + + + K + IQ I V
Sbjct: 18 LILQVTNGCSWNRCHFC---DMYTAPQKQFRAQK-IDKIAEDIQRVAQRNLSISRVFLAD 73
Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKP 206
GD + L RL+ + +R + V +R+ P+ + + L+E G
Sbjct: 74 GDAMSLPFNRLEAICLLIREHLPQV------TRISSYCLPRNLNNKTDAQLARLRELGLS 127
Query: 207 VYIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239
+ + E A+ R+ AG +++L+
Sbjct: 128 LLYVGCESGDDEVLARIEKGETFDSSLLALQRIRAAGMKSSVMILN 173
>gi|294673365|ref|YP_003573981.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
ruminicola 23]
gi|294473953|gb|ADE83342.1| putative oxygen-independent coproporphyrinogen III oxidase
[Prevotella ruminicola 23]
Length = 375
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 31/161 (19%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----------QIWEV 147
L + C C +C S G L + +A I+ +S + +
Sbjct: 4 LYVHIPFCSSRCVYCG----FYSTTGLALRERYVDALCQEIKMRSLPTNPPQKEGSLGTI 59
Query: 148 IFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
GG P L+ +L+++ + +++ + V+P + PEL L++
Sbjct: 60 YLGGGTPSQLTIPQLRRIFDAIYIYNKVENDAEVTIE-----VNPDDVTPELAAALQQLP 114
Query: 205 KPVYIA---------IHANHPYEFSEEAIAAISRLANAGII 236
+H S + A++ L AG
Sbjct: 115 INRVSMGAQTFNDERLHFLRRRHSSAQVHQAVATLRQAGFQ 155
>gi|282165127|ref|YP_003357512.1| FO synthase subunit 2 [Methanocella paludicola SANAE]
gi|282157441|dbj|BAI62529.1| FO synthase subunit 2 [Methanocella paludicola SANAE]
Length = 355
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 102 LHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
+C CRFC FR L K A AY EV GG +LS
Sbjct: 57 TDICIGTCRFCAFRNRENYRLTDEQLLKK-VGEAKAY-----GATEVCIQGG---LLSDM 107
Query: 161 RLQKVLKTLRYIKHVQILRFH 181
L+ + L+ IK + H
Sbjct: 108 YLKDYVAMLKSIKGKYDIDIH 128
>gi|259090313|pdb|3IIZ|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From
T. Maritima In Complex With S-Adenosyl-L-Methionine
Length = 348
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 89 IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I +Y R +++ +VC C +C R + K ++ ++ +
Sbjct: 42 IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
V+ +G DP + + ++K ++ +
Sbjct: 102 KTIVLQSGEDPYXMPD-VISDIVKEIKKM 129
>gi|238753337|ref|ZP_04614700.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
29473]
gi|238708290|gb|EEQ00645.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
29473]
Length = 327
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 21/163 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + VC C +C + + L+ + ++ TGG+P +
Sbjct: 18 LSITDVCNFRCTYCLPDGYQPNGVKSFLTLDEIRRVGRAFAALGT-EKIRLTGGEPSMRR 76
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
++ LR ++ L + R++ +++Q ++AG + I + P
Sbjct: 77 D--FPDIIAALRENPAIRTL-----AVTTNGYRLSRDVVQW-RDAGLT-ALNISVDSLDP 127
Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
+F + + I AG + +VL++ +ND
Sbjct: 128 RQFHAITGQDKFHQVMQGIDAAFEAGFEKIKINAVLMREVNDR 170
>gi|115372357|ref|ZP_01459666.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115370570|gb|EAU69496.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 469
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP + ++ RE+ + Y LK+ C C FC +
Sbjct: 124 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 169
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
G Q+ ++ D A + + E+ D L +L +LK L
Sbjct: 170 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 225
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ V+ +R H P + P ELI+ +
Sbjct: 226 VD-VRWIRLHYAYPRIFP----DELIEVMA 250
>gi|189500325|ref|YP_001959795.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495766|gb|ACE04314.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length = 417
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
D +L L C + C C G + T L + + ++ V FTGG+P
Sbjct: 60 DTAILCLTEQCNLNCIHCSVNASPGGK--THLDPGVLRRCIEELCS-LEVRVVKFTGGEP 116
Query: 155 LILS 158
L
Sbjct: 117 LTYP 120
>gi|310819551|ref|YP_003951909.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
DW4/3-1]
gi|309392623|gb|ADO70082.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
DW4/3-1]
Length = 459
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
RQ IP + ++ RE+ + Y LK+ C C FC +
Sbjct: 114 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 159
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
G Q+ ++ D A + + E+ D L +L +LK L
Sbjct: 160 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 215
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+ V+ +R H P + P ELI+ +
Sbjct: 216 VD-VRWIRLHYAYPRIFP----DELIEVMA 240
>gi|218264310|ref|ZP_03478167.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
DSM 18315]
gi|218222111|gb|EEC94761.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
DSM 18315]
Length = 440
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S K E A S E++ TG
Sbjct: 149 RTRHFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVKQAEEVAA-----SGGKEIVLTG 203
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + + +R + V+ I+R+ R+ ++P I E I K
Sbjct: 204 VNIGDFGKSTGETFIDLIRALDEVEGIVRY--RISSIEPNLITDEAID-FVAHSKHFAPH 260
Query: 211 IHA 213
H
Sbjct: 261 FHI 263
>gi|220917205|ref|YP_002492509.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955059|gb|ACL65443.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 326
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 30/185 (16%)
Query: 98 LLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
++ + VC CRFC + + + L+ E AL YI S + + GG
Sbjct: 86 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAEAIAELALDYIVVTSVDRDDLPDGG 145
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAI 211
++ L+ I V ++ P R +PE ++ + A V+
Sbjct: 146 ------AAHFADAIRRLKEIP-------GLLVEVLTPDFRGDPEAVRTVGRAAPDVFANN 192
Query: 212 HANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ A +++L ++++S ++ G+ + + MR
Sbjct: 193 -LETVRRLTPAVRDAKATYDQTLGVLAQLKREFPQVVTKSSIMVGLGEQEAEVVEAMRDL 251
Query: 262 VELRI 266
+
Sbjct: 252 RAHGV 256
>gi|148270626|ref|YP_001245086.1| biotin synthase [Thermotoga petrophila RKU-1]
gi|147736170|gb|ABQ47510.1| biotin synthase [Thermotoga petrophila RKU-1]
Length = 348
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + + +++ ++ +
Sbjct: 114 YMPN-VISDIVREIKKM 129
>gi|110834795|ref|YP_693654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alcanivorax
borkumensis SK2]
gi|123345402|sp|Q0VN66|MIAB_ALCBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|110647906|emb|CAL17382.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 445
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149
+ ++ C YC FC V S+ + L IQ + EV
Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLKEIQHLADMGVREVNLLGQNV 203
Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201
G D L L +++ +R I + +R+ + P+ + ++ ++ + +
Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSEALIQVYEDVPELVS 260
Query: 202 EAGKPV 207
PV
Sbjct: 261 HLHLPV 266
>gi|86742173|ref|YP_482573.1| molybdenum cofactor biosynthesis protein A [Frankia sp. CcI3]
gi|86569035|gb|ABD12844.1| GTP cyclohydrolase subunit MoaA [Frankia sp. CcI3]
Length = 328
Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 39/245 (15%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C E + +L+ + + + + EV TGG+P++
Sbjct: 16 VSLTDRCNLRCTYCMPAEGLAWLPGERMLTDDEVVRLVGVAVGRLGVTEVRLTGGEPML- 74
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
L +++ L LR + + I L L+ AG + +++
Sbjct: 75 -RPGLVELVARLAA------LRPRPELSVTTNGLILARLAGPLRAAGLDRINVSLDTLDA 127
Query: 217 YEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDD--PEILANLMRTFVE 263
F RL + + SVL++G+NDD P +L +R E
Sbjct: 128 DRFVRITRR--ERLGDVLAGLSAAAASGFTPVKVNSVLVRGVNDDEAPRLLRWCLREGYE 185
Query: 264 LRIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKEK-----ISGL-CQPFYILDLPG 315
LR + H R T+ +I+A L+ + + G P + ++ G
Sbjct: 186 LR------FIEQMPLDAQHAWRRDTMVTAGEILACLRAEFTLTPLPGRGSAPAELFEVNG 239
Query: 316 GYGKV 320
G G+V
Sbjct: 240 GPGRV 244
>gi|327309983|ref|YP_004336880.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
768-20]
gi|326946462|gb|AEA11568.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
Length = 291
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 24/172 (13%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
L C C +C+ + E +++ + + DP
Sbjct: 23 LNPYTGCGHSCAYCYISGYIPRAFQPRPKEDLLERVRRDVKKLPPGSVISLSNSSDPYTP 82
Query: 158 SHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
L+ + L + H ++L ++ P+V + L + + I
Sbjct: 83 PEAELRLTRRALSLILEAGH-KVL-IVTKSPLVL------RDLDILSKYPGRAVVQITVT 134
Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEIL 254
E A + A R+A AGI + + ++ +ND PE L
Sbjct: 135 TLDERIAERLEPRAPRPSARLEAARRIAEAGIPVGVRLDPIVPYVNDSPESL 186
>gi|325967847|ref|YP_004244039.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323707050|gb|ADY00537.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 385
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
+++ L + + + + + L H C + CR C+ + G LS D L ++
Sbjct: 28 EDNNELPYLSMNFINDVTIYLTHACNLECRHCYL--LAGKPLSNELSIDDWLLILDKLR- 84
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
V GG+P++L + L K++ + +
Sbjct: 85 DLGAKYVYLLGGEPMLLIRRGLLKIISHAKDL 116
>gi|164687526|ref|ZP_02211554.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM
16795]
gi|164603300|gb|EDQ96765.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM
16795]
Length = 449
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF + +++ + +AA+ Y+ S E+ F GG+PL
Sbjct: 90 LHVSHDCNLRCKYCFASQGDFGGAKEIMNFEVGKAAIDYLIANSGNRRNLEIDFFGGEPL 149
Query: 156 I 156
+
Sbjct: 150 M 150
>gi|15451307|dbj|BAB64457.1| hypothetical protein [Macaca fascicularis]
Length = 877
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%)
Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
+ V + + + Y+ + E + + K+L +LK L
Sbjct: 478 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 531
Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
++ L + P P+ L+ G ++IH H F E +S L +
Sbjct: 532 DLESL---LQAPGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 584
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
G L S+ +L I D E L R + +I YL G F++ ++
Sbjct: 585 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 641
Query: 289 EGQKIVASLKE 299
I+ ++K
Sbjct: 642 RSLGIMQTVKG 652
>gi|16082543|ref|NP_394103.1| coenzyme PQQ synthesis protein E [Thermoplasma acidophilum DSM
1728]
Length = 368
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 28/187 (14%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148
P I + C + C C ++ + + ++ ++ + + VI
Sbjct: 8 KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 63
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
TGGD +L R+ ++ LR Q + F S P V + E I KE G
Sbjct: 64 LTGGD--MLRKHRIWDIMDYLRS----QEIPF-SVSPAVT-DLLTHEAILKFKEFGVS-S 114
Query: 209 IAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILANL 257
++I + E E+ AI L + GI + +V+++ ++D P +L +
Sbjct: 115 VSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLKLI 174
Query: 258 MRTFVEL 264
+ V++
Sbjct: 175 IDKGVKV 181
>gi|62184869|ref|YP_219654.1| hypothetical protein CAB227 [Chlamydophila abortus S26/3]
gi|62147936|emb|CAH63683.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 370
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 25/93 (26%), Gaps = 11/93 (11%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y L + C C FC G KG + + + I E GG
Sbjct: 66 YSSTFYLYPTNFCEFNCTFCAFYAKPGDPKGWFHTPDQLIEKIQEL--DVPITETHIVGG 123
Query: 153 DPLILSHKRLQKVLKTLRYIK------HVQILR 179
L + IK HV+ L
Sbjct: 124 ---CFPDCDLDYYTELFSKIKAHFPHLHVKALT 153
>gi|228912462|ref|ZP_04076141.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200]
gi|228847177|gb|EEM92152.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200]
Length = 468
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRRE 116
R+ I EEL + D D + I Y + L + H C + C +CF +
Sbjct: 63 RETIADIEELKRDGKLFTD--DDYKDLSIDLINRPTYVKALCLNVAHTCNLSCEYCFASQ 120
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167
+ ++S + + A+ ++ E S +V F GG+PL+ K +++++
Sbjct: 121 GKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173
>gi|167630037|ref|YP_001680536.1| elongator protein 3/miab/nifb, putative [Heliobacterium
modesticaldum Ice1]
gi|167592777|gb|ABZ84525.1| elongator protein 3/miab/nifb, putative [Heliobacterium
modesticaldum Ice1]
Length = 393
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 21/117 (17%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + + C ++C C+ G + + + + ++ +GG
Sbjct: 35 YGPVVAWNVSRTCNLHCIHCYSDSDEIEYPGELTTKEAIRFIDD--LADFNVPVLLLSGG 92
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAG 204
+PL+ + L + +R + I P++ + +K+ G
Sbjct: 93 EPLMRPD------IFDLVAHATKRNIRVTFSTNGT--------LITPDVAKEIKKYG 135
>gi|148241697|ref|YP_001226854.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
sp. RCC307]
gi|147850007|emb|CAK27501.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
sp. RCC307]
Length = 410
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----------EK 141
R P R L + C C +C + G +++ Y+
Sbjct: 7 RRPPRSLYLHIPFCHRRCFYC---DFPVVPLGDQADGSRSQSIADYLHWLLRDLAAAPAG 63
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
+ V GG P +LS +L ++L +R
Sbjct: 64 PPLSTVYIGGGTPSMLSPDQLAQLLAAVRS 93
>gi|146282425|ref|YP_001172578.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas
stutzeri A1501]
gi|145570630|gb|ABP79736.1| coenzyme PQQ synthesis protein E [Pseudomonas stutzeri A1501]
Length = 381
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL+L + CP+ C FC + LS+ + +A + + ++ F+GG+P +
Sbjct: 19 LLLELTYQCPLQCVFCSNPRNFADYRPDELSTAEWIDVMAQARAMGAV-QIGFSGGEPTL 77
Query: 157 LSHKRLQKVLKTLRYI 172
L+ ++ +
Sbjct: 78 RKD--LETLVAEADRM 91
>gi|325264391|ref|ZP_08131122.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp.
D5]
gi|324030462|gb|EGB91746.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp.
D5]
Length = 304
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
GI + + L+ G+ND + + +++ + I+ Y
Sbjct: 216 GIFVR--TPLVPGVNDSEQDILDMIEALQKNGIRNY 249
>gi|178847575|pdb|3CIW|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde
From Thermotoga Maritima
gi|259090312|pdb|3IIX|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From
T. Maritima In Complex With Methionine And
5'deoxyadenosine
Length = 348
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R +++ +VC C +C R + K ++ ++ + V+ +G DP
Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113
Query: 156 ILSHKRLQKVLKTLRYI 172
+ + ++K ++ +
Sbjct: 114 XMPD-VISDIVKEIKKM 129
>gi|138894071|ref|YP_001124524.1| thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans
NG80-2]
gi|196250260|ref|ZP_03148953.1| YfkB-like domain protein [Geobacillus sp. G11MC16]
gi|134265584|gb|ABO65779.1| Thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans
NG80-2]
gi|196210149|gb|EDY04915.1| YfkB-like domain protein [Geobacillus sp. G11MC16]
Length = 374
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L +C + C C + ++ L + + ++E + + TGG+P +LS
Sbjct: 35 LTTTTLCNMRCEHCAVGYTLATKDPDALP---LDLLIRRLEEIPHLRSLSITGGEP-MLS 90
Query: 159 HKRLQKVLKTLRYIKHVQILR 179
+++ + L H + +R
Sbjct: 91 LTSVERYVVPLLRYAHERGVR 111
>gi|124485405|ref|YP_001030021.1| hypothetical protein Mlab_0580 [Methanocorpusculum labreanum Z]
gi|124362946|gb|ABN06754.1| MiaB-like tRNA modifying enzyme [Methanocorpusculum labreanum Z]
Length = 416
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 97 ILLKLLHVCPVYCRFC-FRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
+L++ C +C +C R ++ + EA IQ +Q
Sbjct: 127 AVLQIARGCNGHCTYCITRLARGKLVSFSAEDIVRQAKSIVEAGATEIQLTAQDTSSWGL 186
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP-IVDPQRINPELIQCLKEAGKPVY 208
D L L +L+ L I ++R P + P I + + LK+ ++
Sbjct: 187 DRNDGLRLPD-----LLRQLCAIPGNFMIRIGMANPDTLLP--ILDDFLDALKDP--KIF 237
Query: 209 IAIHA 213
+ +H
Sbjct: 238 LFLHI 242
>gi|121607765|ref|YP_995572.1| molybdenum cofactor biosynthesis protein A [Verminephrobacter
eiseniae EF01-2]
gi|121552405|gb|ABM56554.1| GTP cyclohydrolase subunit MoaA [Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C F + G +L ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYPYLPHGALLRFEEIARLARLFLAH-GVRKIRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K L ++ L +
Sbjct: 103 PLL--RKNLPALVAQLAAL 119
>gi|78043460|ref|YP_359414.1| radical SAM domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995575|gb|ABB14474.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 452
Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149
P +I + C + C +CF++ + K + + + +A Y+ + + +
Sbjct: 88 PTQIFFVPTYNCNLACSYCFQQGI--KDKKDLPTKEVLDAFFNYVNQNFKNEPEKPFLTL 145
Query: 150 TGGDPLILS 158
GG+PLI S
Sbjct: 146 FGGEPLIAS 154
>gi|303247563|ref|ZP_07333834.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
gi|302491043|gb|EFL50937.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
Length = 364
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
Y + + +VC CRFC ++ G+ LS D A LA +E + I E+ GG
Sbjct: 61 YVHNVHINFTNVCVNACRFCAFFKVKGAAGARTLSVDDIVAELAA-RENAPIREIHVVGG 119
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ 176
+ L + LR I V+
Sbjct: 120 ---LNPDLPLSYYVDMLRAISRVR 140
>gi|262377253|ref|ZP_06070477.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
SH145]
gi|262307706|gb|EEY88845.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
SH145]
Length = 485
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
+ + ++ C YC FC V S+ + LA I + + E+ G
Sbjct: 185 KAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQN 239
Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G+ + +L+ + I + +R+ + P+ N +LIQC ++ +
Sbjct: 240 VNGYRGETFEGNICTFADLLRLVADIPGIGRIRYTTSHPL----EFNDDLIQCYRDLPQ- 294
Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229
+ H + P S + + A+ R
Sbjct: 295 --MVSHLHLPVQSGSNDVLQAMKR 316
>gi|229815230|ref|ZP_04445566.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
13280]
gi|229809240|gb|EEP45006.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
13280]
Length = 427
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R+ +K+ C C +C + G ++ ++S + A E++ I EV+ TG
Sbjct: 133 RSRLGVKVQDGCNNRCSYCIVWKARGPERSVPVASVLEQVRRA-----ERAGIPEVVLTG 187
Query: 152 G-----DPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
D + S + ++L + ++ +R S ++P ++ LI + G
Sbjct: 188 VNLGAYDGVDASDSHVEIDELLDIILEQTNIPQVRLSS----LEPMDVHDRLIDAMVAGG 243
Query: 205 KPVYIAIH 212
+ V +H
Sbjct: 244 ERVAPFLH 251
>gi|237716499|ref|ZP_04546980.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408097|ref|ZP_06084645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|294645091|ref|ZP_06722817.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
gi|294809491|ref|ZP_06768194.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|229444146|gb|EEO49937.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262354905|gb|EEZ03997.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|292639597|gb|EFF57889.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
gi|294443309|gb|EFG12073.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
Length = 436
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G + ++ + Y+ + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + L ++++ + I V+ +R H P +L + ++E
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242
>gi|206969427|ref|ZP_03230381.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134]
gi|229180587|ref|ZP_04307929.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W]
gi|229192521|ref|ZP_04319483.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876]
gi|206735115|gb|EDZ52283.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134]
gi|228590945|gb|EEK48802.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876]
gi|228603011|gb|EEK60490.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W]
Length = 450
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L +L+ + + ++ LR S ++ +I+ E+I+ L ++
Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251
Query: 206 PVYIAIHA 213
V +H
Sbjct: 252 -VVRHLHI 258
>gi|54027758|ref|YP_121999.1| hypothetical protein pnf11100 [Nocardia farcinica IFM 10152]
gi|54019266|dbj|BAD60635.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 377
Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 10/98 (10%)
Query: 99 LKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDP 154
L++ C C C R T ++ A L ++ + +I ++ GDP
Sbjct: 15 LEVSTRCNAECPMCARNLFGATAPGLTETSMTLDQFRACLPEHVLAQLEIVDICGAYGDP 74
Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF----HSRVPIVD 188
I L + + I +R R P
Sbjct: 75 AIAP--ELLDICHHIHTINPSTTIRIYSNGGLRTPTWW 110
>gi|328951573|ref|YP_004368908.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus
hydrothermalis DSM 14884]
gi|328451897|gb|AEB12798.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus
hydrothermalis DSM 14884]
Length = 353
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 39/197 (19%)
Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
Y DR + + + CP C FC +M + T D A AY Q +I V+
Sbjct: 107 YKDRRTICISSMVGCPAGCTFCATGQMRFGRNLTAPEILDQLLAAAYHQGISPREIRNVV 166
Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK------ 201
G G+PL+ L VLK +R + H + + P+RI + +
Sbjct: 167 LMGMGEPLL----NLTNVLKAVRRM-------IHKQALAMSPRRITLSTVGIPRGIYRLA 215
Query: 202 --EAGKPVYIAIHA---NHPYEFSEEA-IAAISRLANAGIILLSQS--------VLLKGI 247
+ G + +++HA A AI + +A ++ LL+G+
Sbjct: 216 EEDVGVKLALSLHAPDDETRRRIIPTAHRYAIEEIMDAVRHYYRRTKRRVTLEYTLLRGV 275
Query: 248 NDD---PEILANLMRTF 261
ND ++LA R
Sbjct: 276 NDHLWQAKMLAKHTRGL 292
>gi|297617252|ref|YP_003702411.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145089|gb|ADI01846.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 293
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 62/168 (36%), Gaps = 36/168 (21%)
Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGG 152
+L+ C C FC G K + E A I+ + +V G
Sbjct: 19 ILQCTVGCSHNGCTFC------GMYKDKKYRVRSLEEIKADIRMAKLYYGDLQKVFLADG 72
Query: 153 DPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGK 205
D L + L ++L L + HV I PQ I E +Q LK+AG
Sbjct: 73 DALAMQTDELLEILNYLYRLFPSLYHVGIY--------AGPQSILQKTEEELQMLKQAGL 124
Query: 206 PV-YIAIHANHPY---EFS-----EEAIAAISRLANAGIILLSQSVLL 244
+ Y+ I E + EE + A ++ +GI L S +VLL
Sbjct: 125 TIAYLGIETGDERLLKEINKGVTYEEMVEAGQKIVRSGIKL-SATVLL 171
>gi|300024986|ref|YP_003757597.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526807|gb|ADJ25276.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
ATCC 51888]
Length = 449
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVIF 149
L + C +C FC GS+ ++ + EA A + +
Sbjct: 157 AFLTIQEGCDKFCTFCVVPYTRGSEYSRSVAKIEAEAHELARAGAKELVLLGQNVNAYHG 216
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
G D S L +++TL I+ V+ +R+ + P
Sbjct: 217 EGADGRTAS---LADLIRTLAAIEGVERIRYMTSHP 249
>gi|206601630|gb|EDZ38113.1| Putative radical SAM family protein [Leptospirillum sp. Group II
'5-way CG']
Length = 379
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 92/291 (31%), Gaps = 60/291 (20%)
Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149
DR L + C + CRFC R +G + +S A + E
Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLIRNLSVSEILGQVRVANRLLAESPVRDMSKE 159
Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194
T PL+ L + + L H+ S + P+ RI
Sbjct: 160 TEPAPLLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241
I+ L +G V +A+ + P +EE + ++ L ++
Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272
Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290
VLL G+ND L R ++ PY G+ + R +
Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324
Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
++ L K ++ + D+ G G++ + + + ++ D
Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375
>gi|42783437|ref|NP_980684.1| hypothetical protein BCE_4391 [Bacillus cereus ATCC 10987]
gi|206978420|ref|ZP_03239289.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97]
gi|217961800|ref|YP_002340370.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187]
gi|222097755|ref|YP_002531812.1| fe-s oxidoreductase [Bacillus cereus Q1]
gi|229141048|ref|ZP_04269590.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26]
gi|229198438|ref|ZP_04325142.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293]
gi|42739366|gb|AAS43292.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|206743376|gb|EDZ54814.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97]
gi|217065337|gb|ACJ79587.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187]
gi|221241813|gb|ACM14523.1| Fe-S oxidoreductase [Bacillus cereus Q1]
gi|228584941|gb|EEK43055.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293]
gi|228642326|gb|EEK98615.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26]
gi|324328214|gb|ADY23474.1| Fe-S oxidoreductase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 450
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + + + A + E++ T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + L +L+ + + ++ LR S ++ +I+ E+I+ L ++
Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251
Query: 206 PVYIAIHA 213
V +H
Sbjct: 252 -VVRHLHI 258
>gi|18312049|ref|NP_558716.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
gi|18159475|gb|AAL62898.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
IM2]
Length = 346
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138
GIV R + I ++ +C + C FC R + +LS E + Y
Sbjct: 22 GIVDRGTNVIEVRPTSICALNCIFCSVNAGPLSRVRWAEYVVEPEPLLS--ALEEVVRY- 78
Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
++ + I GDP L ++++ + IK V ++ +R+ ++ E +Q
Sbjct: 79 KKTDDVEVHIDGMGDPGHYP--HLAQLVRGAKSIKGVALVSMQTRL-----YMLDKEAVQ 131
Query: 199 CLKEAGK 205
L AG
Sbjct: 132 QLANAGL 138
>gi|188588298|ref|YP_001920864.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498579|gb|ACD51715.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
oxidoreductase [Clostridium botulinum E3 str. Alaska
E43]
Length = 288
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
+ ++++ C C FC M S+ T+ S ++ + + Y + + ++ G
Sbjct: 14 NSLIIQATLGCSHNKCSFC---NMYKSKIFTIKSLEEIKKEIDYFRTIYKYVEKIFLADG 70
Query: 153 DPLILSHKRLQKVLKTLRYIKHV 175
D LI+ L+ +L+ YIK+V
Sbjct: 71 DALIIPIGDLKSILE---YIKNV 90
>gi|150400543|ref|YP_001324309.1| radical SAM domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150013246|gb|ABR55697.1| Radical SAM domain protein [Methanococcus aeolicus Nankai-3]
Length = 290
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIF 149
+Y ++LK+ + C + C +C+ + + ++ YI +++ ++ F
Sbjct: 4 KY---LILKITNRCNLDCIYCYNMGHKINKNMDFTTAK----NSIDYILNDGTELLKIQF 56
Query: 150 TGGDPLILSHKRLQKVLK 167
TGG+PL L+ + ++KV+
Sbjct: 57 TGGEPL-LNFELIEKVIS 73
>gi|124515329|gb|EAY56839.1| putative radical SAM family protein [Leptospirillum rubarum]
Length = 379
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 91/291 (31%), Gaps = 60/291 (20%)
Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149
DR L + C + CRFC R +G + +S A + E
Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLVRNLSVSEILGQVRVANRLLAEAPVRDMSKE 159
Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194
T P + L + + L H+ S + P+ RI
Sbjct: 160 TDPTPFLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215
Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241
I+ L +G V +A+ + P +EE + ++ L ++
Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272
Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290
VLL G+ND L R ++ PY G+ + R +
Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324
Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
++ L K ++ + D+ G G++ + + + ++ D
Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375
>gi|219667931|ref|YP_002458366.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
gi|219538191|gb|ACL19930.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
Length = 441
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
R P + +++ C + C CF + S + YI + + T
Sbjct: 94 RQPTLVEIEVTEGCNLRCPVCF-MAANDFRPDPNPSLEALGEKYRYILRHTNPDTSIQLT 152
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG+P + + L +++ R I Q + ++ ++ R NP+ +Q L EAG I
Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205
Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257
+ + YE + AI+ AG+ ++ +++GIN+ E+L L
Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
V + I + A G+ F + + +
Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291
>gi|90426035|ref|YP_534405.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris
BisB18]
gi|90108049|gb|ABD90086.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris
BisB18]
Length = 340
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R+ DR+ + + C C +C V + + +L+ + + + + V TG
Sbjct: 19 RHIDRLRVSVTDRCNFRCSYCLGAHPVFAPRAELLTLDELDRLCSAFVGC-GVRRVRLTG 77
Query: 152 GDPLILSHKRLQKVLKTLRY 171
G+PL+ + L ++ L
Sbjct: 78 GEPLV--RRNLMSFVRALSR 95
>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
Length = 614
Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 30/187 (16%)
Query: 48 NPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
+ HN +P+ R P + P + S + G + +L ++ CP
Sbjct: 132 DRHNALEPLYRNSGPIDLLHQVSPW--------LDGSLVPG------EGVLWEVSRGCPF 177
Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
C FCF G ++ E LA + + +R +K+L+
Sbjct: 178 RCSFCFDAR--GDHGVRTMAFSRLEQELALFVKHRVSQVWVLDST--FNYPAERGKKLLR 233
Query: 168 TLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
++ + H+ FH I I+ EL Q L E V I + + + +
Sbjct: 234 LIKRVAPHLH---FHLEAKIEF---IDEELAQLLSEIHCSVQIGL-----QSANPDVVRH 282
Query: 227 ISRLANA 233
+ R +A
Sbjct: 283 VHRHFDA 289
>gi|257062773|ref|YP_003142445.1| pyruvate formate-lyase activating-like enzyme [Slackia
heliotrinireducens DSM 20476]
gi|256790426|gb|ACV21096.1| pyruvate formate-lyase activating-like enzyme [Slackia
heliotrinireducens DSM 20476]
Length = 464
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPLIL 157
CP C FCF + G + +D + LA I + + + TGG+PL+
Sbjct: 126 FFYSLRCPKNCFFCF-NHNQNNYAGYLDDDRDWRSELAAIMEAGRPMTHLALTGGEPLMR 184
Query: 158 SHK 160
+
Sbjct: 185 PDE 187
>gi|317488970|ref|ZP_07947500.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
gi|316912044|gb|EFV33623.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
Length = 529
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 19/119 (15%)
Query: 91 HRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
RY +R + C CR C S L D + + + I
Sbjct: 141 RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 195
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
EV TGG+PL+ +++ L +R + + ++ +L+ L+E
Sbjct: 196 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 246
>gi|310658009|ref|YP_003935730.1| radical sam domain-containing protein [Clostridium sticklandii DSM
519]
gi|308824787|emb|CBH20825.1| Radical SAM domain protein [Clostridium sticklandii]
Length = 453
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L+K + CP C FCF +E+ ++D E +A I + + E+ D +
Sbjct: 184 ALIKTSYGCPYNCSFCFCKEITSG----KYYARDIEDVVAEISQIPE-KEIYIVDDD-FL 237
Query: 157 LSHKRLQKVLKTLRY 171
+ RL+K + L+
Sbjct: 238 YNEDRLKKFIALLKE 252
>gi|297545376|ref|YP_003677678.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843151|gb|ADH61667.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 453
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 99 LKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
L L + C + C +C+ R L + + +I E+ I +IF GG+P
Sbjct: 72 LHLTYGCNMNCPYCYIPESYRRNYQKMSYNQL-EEIIDKLSKWINERGGIKRIIFHGGEP 130
Query: 155 LILS 158
L+
Sbjct: 131 LLAK 134
>gi|289207329|ref|YP_003459395.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp.
K90mix]
gi|288942960|gb|ADC70659.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp.
K90mix]
Length = 334
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L + C + C +C + ++ LS ++ E + V TGG+PL
Sbjct: 22 VRLSVTDRCDLRCFYCMPKGFRDFEEPEHWLSFEEIERVMGAFGRLGT-RRVRLTGGEPL 80
Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184
+ + L L L I + + +R+
Sbjct: 81 VRKNLPDLAARLNALPGIDDISLSTNATRM 110
>gi|325958807|ref|YP_004290273.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
gi|325330239|gb|ADZ09301.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
Length = 506
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +++ + C + C C+ E G + L+S+ + L + +S + + F+GG+
Sbjct: 126 PFQVVWNITKSCNMNCAHCY--ENAGKKADDELNSEQIKQCLETL-SRSGVTSIAFSGGE 182
Query: 154 P 154
P
Sbjct: 183 P 183
>gi|299140666|ref|ZP_07033804.1| 2-methylthioadenine synthetase [Prevotella oris C735]
gi|298577632|gb|EFI49500.1| 2-methylthioadenine synthetase [Prevotella oris C735]
Length = 446
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + ++S +A A + +I + TG +
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+H++ ++K L ++ ++ R S ++P I+ +LI E+
Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262
Query: 211 IHANHPYEFSEEAI-AAISRL 230
H + P + +A+ + RL
Sbjct: 263 PHFHIPLQSGSDAVLKLMHRL 283
>gi|296242351|ref|YP_003649838.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094935|gb|ADG90886.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
Length = 306
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C FC R + G + VL+ D LAY+ K I TGG+PL+
Sbjct: 15 IVVTMRCNYNCIFCHREGLTGLDRAEVLTPDDY-RYLAYVSRKLGIVYFKITGGEPLLRR 73
Query: 159 H 159
Sbjct: 74 D 74
>gi|257793769|ref|ZP_05642748.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258420985|ref|ZP_05683916.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257787741|gb|EEV26081.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257842933|gb|EEV67351.1| conserved hypothetical protein [Staphylococcus aureus A9719]
Length = 381
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 10 IHNDPWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109
>gi|302541842|ref|ZP_07294184.1| basic proline-rich protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459460|gb|EFL22553.1| basic proline-rich protein [Streptomyces himastatinicus ATCC 53653]
Length = 569
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWEVIFTG 151
+LL + CP+ C C + + S+ +AA + + V+ TG
Sbjct: 17 VLLTVTRRCPLACAHC--------STASSMGSEQIDAAVLKRFVGTFTPADRPEYVLLTG 68
Query: 152 GDPLILSHKRLQKVLKTLRYI 172
G+PL L + + ++ + +R +
Sbjct: 69 GEPL-LRPRLVAEIAERVRDV 88
>gi|297566420|ref|YP_003685392.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
silvanus DSM 9946]
gi|296850869|gb|ADH63884.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
silvanus DSM 9946]
Length = 371
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 96 RILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R L + CP C +C G L EAA Y + + + GG
Sbjct: 2 RSLYVHVPFCPTLCPYCDFHVVRRYGGVVEAYLERLAEEAAALYERFPGPLETLYLGGGT 61
Query: 154 PLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
P L ++ L+++ + L + + + + +P +NPE ++ LK+ G
Sbjct: 62 PSFLRNRELEQLFRALPWNVPSIHEVTME-----ANPGTLNPERLELLKDLGVN 110
>gi|258405933|ref|YP_003198675.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798160|gb|ACV69097.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
Length = 442
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 50/239 (20%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
LL++ C + C CF R + GT +A+I+E + + +GG+P
Sbjct: 91 TTLLEVTQRCNLGCPICFARSL---DSGTDPDLDTLARNMAHIRETAGPCTLQLSGGEP- 146
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYI---- 209
+ L +++ L ++ ++++ ++ R PE + L+EAG
Sbjct: 147 TVRDD-LPEIV-RLAAAQNFRLVQLNTNGL-----RFAREPEYARALREAGLEAVFFQFD 199
Query: 210 AIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
++H EE A++ + AG+ ++ L+ G+N + +
Sbjct: 200 SVHDADYTTIRGRALWEEKQQALTAMGRAGLGVVLVPTLVPGVNTRA------IGAILRF 253
Query: 265 RIKPYYLHHPDLAAGTSHFRLTIE---------------EGQKIVASLKEKISGLCQPF 308
++ HHP + G HF+ I +I+ +L+E+ +GL +
Sbjct: 254 GVQ----HHP-VVRGV-HFQ-PISYFGRYPAPPADTDRLTLPEIMRALEEQTAGLVRTQ 305
>gi|219853185|ref|YP_002467617.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
gi|219547444|gb|ACL17894.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
Length = 381
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 53/231 (22%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P I + CP+ C C+ + VLS+++ + + I+ + V+ +GG+
Sbjct: 31 PRIISWNITLRCPLKCAHCYVDAG-EKEADRVLSTQEALSVIDQIRAIGKP-VVVLSGGE 88
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS----RVPI-VDPQRINPELIQCLKEAG-KPV 207
PL + + + I R+ + R+ + I+ E LKEAG + V
Sbjct: 89 PL---------LREDMYDIA-----RYGTEQGLRMVMGTSGYLIDQETAAKLKEAGIRAV 134
Query: 208 YI-------AIH--ANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257
I A H E+A AI +AGI + ++ SV+ I+ + +L
Sbjct: 135 AISLDSKDPATHDAFRGLDGVWEKATKAIGHCHDAGIAVQINMSVMRSAIS----EVEDL 190
Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASLKEKI 301
+ L + Y L F + ++I + +I
Sbjct: 191 IGLGTSLGVHDYQLF----------FPIPTGRARQIEPRSPEEYEEMIRRI 231
>gi|115622853|ref|XP_791955.2| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
purpuratus]
Length = 267
Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+ + + + L C + C++C E V S K +LS+++ + ++
Sbjct: 81 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 139
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
TGG+PL+ + ++++ LR ++ ++ +
Sbjct: 140 TGGEPLVRKD--IVEIIEGLRELEGLKQI 166
>gi|304314983|ref|YP_003850130.1| Fe-S oxidoreductase [Methanothermobacter marburgensis str. Marburg]
gi|302588442|gb|ADL58817.1| predicted Fe-S oxidoreductase [Methanothermobacter marburgensis
str. Marburg]
Length = 491
Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 30/170 (17%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155
L+ + + C + C CF V + ++ L ++ + + + GG+P
Sbjct: 93 LIDVTNRCNLKCPICFANAAVSKY-LYEPTYEEIREMLRNLRRNRPVPTPAIQYAGGEPT 151
Query: 156 ILSH-KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ L K+ + HVQI +R + PEL L+EAG +
Sbjct: 152 VRKDIVELVKLARE-EGFTHVQIATNGVRLARK----------PELAAELREAGLNT-VY 199
Query: 211 IHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + E + AI AG+ ++ L++G+ND
Sbjct: 200 LQFDGVTEEPYLVSRGKNLLPLKLQAIENCRKAGLGIVLVPTLVRGLNDS 249
>gi|302385311|ref|YP_003821133.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
gi|302195939|gb|ADL03510.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
Length = 454
Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 25/131 (19%)
Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + + V+ A Y E++F
Sbjct: 159 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRKPDEVVEEVKRLTASGY-------QEIVF 211
Query: 150 TGGD----PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
TG + K L ++K + ++ ++ +R S ++P+ + + L
Sbjct: 212 TGIHLSSYGMDFPEKERLTLLDLVKRVHEVEGLKRIRLGS----LEPRIVTEKFAAELAR 267
Query: 203 AGKPVYIAIHA 213
K I H
Sbjct: 268 LSK---ICPHF 275
>gi|268607898|ref|ZP_06141629.1| thiamine biosynthesis protein ThiH [Ruminococcus flavefaciens FD-1]
Length = 483
Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y DRI+ L L + C C +C + L+ + + +Q+ I
Sbjct: 88 YGDRIVMFAPLYLSNYCVNQCVYCPYHQQNKEIPRKKLTQDEVRDEVIALQDMGHKRLAI 147
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
G DP+ + + + + T+ IKH
Sbjct: 148 EAGEDPVNNPIEYILECINTIYSIKH 173
>gi|262201214|ref|YP_003272422.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
DSM 43247]
gi|262084561|gb|ACY20529.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
DSM 43247]
Length = 365
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ + C + C +C E + +LS+ + L + + FTGG+PL+
Sbjct: 44 VSVTDRCNLRCTYCMPAEGLDWMDSAELLSTDELVRVLTVAVRDLGVHRIRFTGGEPLLR 103
Query: 158 SHKRLQKVLKTLRYIKH 174
L++++ + +
Sbjct: 104 RD--LEEIIARMAALPQ 118
>gi|297583859|ref|YP_003699639.1| radical SAM domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142316|gb|ADH99073.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
Length = 372
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 25/196 (12%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P ++ ++ C + C C L+ K+ + I E ++FTGGD
Sbjct: 9 PFIVIWEVTRACELRCLHCRADAQTEPHPDE-LNHKEGLRLIDAIHEMDNPM-LVFTGGD 66
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
++ L L + +R S P + E ++ KE G +
Sbjct: 67 CMMRED------LFELADYAIQKGMRV-SMTPSAT-DNVTKEKMEKAKEVGLSRWAFSLD 118
Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
I H F + I+ L + L +V+ K E +A L+
Sbjct: 119 GPTPEIHDHFRGTSGSFD-LTLDKINYLKELDMPLQINTVISKYNYHALEEMAALVEELD 177
Query: 263 ELRIKPYYLHHPDLAA 278
+ +Y+
Sbjct: 178 ---VIMWYIFLLVPTG 190
>gi|86609143|ref|YP_477905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|123502140|sp|Q2JKY0|MIAB_SYNJB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|86557685|gb|ABD02642.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 444
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 20/142 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG- 152
+ +++ C C +C + G ++ S+ +A A I+ ++ EV G
Sbjct: 146 TAWINVIYGCNERCTYCIVPRVRGQEQ-----SRQPQAIRAEIEDVARAGYREVTLLGQN 200
Query: 153 -DPL---ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
D + L +L+ + ++ ++ +RF + P ELI E K
Sbjct: 201 IDAYGRDLDPKTNLASLLRFVHSVEGIERIRFATSHPRY----FTEELITTCAELPK--- 253
Query: 209 IAIHANHPYEF-SEEAIAAISR 229
+ H + P++ S E + + R
Sbjct: 254 VCEHFHIPFQAGSNEVLKRMRR 275
>gi|78223499|ref|YP_385246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
metallireducens GS-15]
gi|123756395|sp|Q39TA3|MIAB_GEOMG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|78194754|gb|ABB32521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter metallireducens
GS-15]
Length = 441
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 17/121 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD--- 153
+ ++ C +C +C V +G +S + E + I+ + EV G +
Sbjct: 152 VTVMQGCDNFCSYCI----VPYVRGREISRRSVE-IIGEIRSAVAGGVREVTLLGQNVNS 206
Query: 154 PLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ + L +L+ + I ++ +RF + P+ I+PELI C E K + I
Sbjct: 207 YGLKTPGELSFAGLLREISAIDGLERIRFTTSH----PKDISPELIACFAELPK-LCGHI 261
Query: 212 H 212
H
Sbjct: 262 H 262
>gi|325831056|ref|ZP_08164380.1| radical SAM domain protein [Eggerthella sp. HGA1]
gi|325486977|gb|EGC89423.1| radical SAM domain protein [Eggerthella sp. HGA1]
Length = 475
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 19/119 (15%)
Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
RY +R + + C CR C S L D + + + I
Sbjct: 87 RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 141
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
EV TGG+PL+ +++ L +R + + ++ +L+ L+E
Sbjct: 142 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 192
>gi|302341873|ref|YP_003806402.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus
baarsii DSM 2075]
gi|301638486|gb|ADK83808.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus
baarsii DSM 2075]
Length = 428
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
R L + +C + C +C RR ++ +SS + A AY +Q + ++
Sbjct: 22 GRAHLPVAPLCNIKCNYCDRRYDCVNESRPGVSSAVLQPHQAQAYMERALQAEPRLSVAG 81
Query: 149 FTG-GDPLILSHKRLQKVLK 167
G GDPL + L+ +L+
Sbjct: 82 IAGPGDPLANAEATLETILR 101
>gi|217969807|ref|YP_002355041.1| ribosomal RNA large subunit methyltransferase N [Thauera sp. MZ1T]
gi|217507134|gb|ACK54145.1| Radical SAM domain protein [Thauera sp. MZ1T]
Length = 347
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 38/215 (17%)
Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
C V C FC M G L S + A +A + ++ +V+F G G+P
Sbjct: 104 GCAVGCVFC----MTGKDGLLRQLDSGEIVAQVALARRLRRVHKVVFMGMGEPA----HN 155
Query: 162 LQKVLKTLR------YIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L V++ + + H V LR R+P R+ P L L +
Sbjct: 156 LDAVIEAIELLGTEGALPHKNLVLSTVGDLRVFERLPQ---MRVKPALALSLHSTRAALR 212
Query: 209 IAIHANHPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMRTFVE--- 263
A+ P E + A A G + Q L++G+ND + L ++R
Sbjct: 213 AALLPRAPR-IDPAELVELGEAWARASGYPIQYQWTLIEGVNDGEDELEGIVRLLAGKYA 271
Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
+ + P + G + R E +I L
Sbjct: 272 VMNMIP-----FNRVDGLDYRRPAAESAAEIARRL 301
>gi|150396791|ref|YP_001327258.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae
WSM419]
gi|166217890|sp|A6U9U3|MOAA_SINMW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|150028306|gb|ABR60423.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae
WSM419]
Length = 349
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + ++ TGG+PL+
Sbjct: 34 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELHRLCSAFIA-KGVRKLRLTGGEPLVRK 92
Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
+ ++++ K + + + + S++ + EL+ C V +
Sbjct: 93 NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146
Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
E ++ + I AG+ + +V LK ND + LMR
Sbjct: 147 DKFRQITRWGELTK-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195
>gi|309789580|ref|ZP_07684161.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
DG6]
gi|308228316|gb|EFO81963.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
DG6]
Length = 450
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 27/149 (18%)
Query: 67 LNILPEERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
L P D P+ D H P+ + + + + C + C +C + G ++
Sbjct: 133 LAPNPIYTLDEPALPVRDAAHPPVA---------VHVPIQYGCNMRCSYCVIPQRRGRER 183
Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQ 176
L + A + I + V+ G D + +L +++ + I +
Sbjct: 184 SRSL--DEIVAEVTRIVDHGAREIVLLGQIVDSWGHD--LPGRPQLADLIRAVHAIPGLL 239
Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205
LRF + P + LI+ + +
Sbjct: 240 RLRFLTSH----PAWMTDHLIETVASLPR 264
>gi|229096386|ref|ZP_04227358.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29]
gi|228686948|gb|EEL40854.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29]
Length = 383
Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121
Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
I H ++ + +I + L I + +V+ K D + +A L
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178
Query: 258 MRTF 261
+
Sbjct: 179 IEEL 182
>gi|260893438|ref|YP_003239535.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
gi|260865579|gb|ACX52685.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
Length = 316
Score = 37.0 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQI--WEVIFTGGD 153
+ + C + CR+C + ++ + E + ++ ++I +V TGG+
Sbjct: 8 VSVTDRCNLRCRYCL-----PPEGVKTVAHAEILRFEEIVRIVKAATRIGVRKVRLTGGE 62
Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
PL+ + L ++ L I+ + L
Sbjct: 63 PLV--RRNLSSLVAQLAAIEEIDDL 85
>gi|157146881|ref|YP_001454200.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
gi|157084086|gb|ABV13764.1| hypothetical protein CKO_02656 [Citrobacter koseri ATCC BAA-895]
Length = 445
Score = 37.0 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 12/145 (8%)
Query: 62 PQKEELNILPEEREDPIGDNNHSP-LKGIVHRY---PDRILLKLLHVCPVYCRFC-FRRE 116
P K+ +P P+ S + ++ + R++ + C +C FC F +
Sbjct: 20 PFKDRRATMPWRGAIPVAKEQLSQTWQNVISQTVPPRKRLVYLHIPFCATHCTFCGFYQN 79
Query: 117 MVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY- 171
+ ++ E A + + + + I V F GG P LS + L K++ TLR
Sbjct: 80 RFEEDHCARYTDALLREIEMEADSTLHQSAPIHAVYFGGGTPSALSARDLAKIITTLREK 139
Query: 172 --IKHVQILRFHSRVPIVDPQRINP 194
+ + RV D R++
Sbjct: 140 LPLAPDCEITIEGRVLNFDDARVDA 164
>gi|323345505|ref|ZP_08085728.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC
33269]
gi|323093619|gb|EFZ36197.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC
33269]
Length = 432
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150
LK+ C +C +C + G K + + + QI E+ +
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLITG--KHVSRPKAEILQEVEELVANGVKEFQIIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D I + + ++ + IK V+ +R H P P EL+ +KE
Sbjct: 196 GVD--IDGKRHIADLISAIADIKGVKWIRLHYAYPNQFPM----ELLDVMKEKSN 244
>gi|293332751|ref|NP_001168389.1| hypothetical protein LOC100382158 [Zea mays]
gi|223947957|gb|ACN28062.1| unknown [Zea mays]
Length = 774
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 20/105 (19%)
Query: 55 PIARQFIPQKEELNILPEEREDP-------IGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
PI R + +EEL++ P E+ D ++ +SP + C
Sbjct: 288 PITRLVVSLREELHVHPYEKIDWKAARNSCAKEDVYSPHTWLQ-------------ECLS 334
Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+C + F + + + K + +++ + + + I G
Sbjct: 335 HCLYSFGEPFLTRWPISYMRKKALQQVAEFLKYEDENSQYICIGA 379
>gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
17244]
Length = 454
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 63 QKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRIL-----LKLLHVCPVYCRFCFRRE 116
+EE+ + E ++ +N ++P K + + ++ + L + H C + CR+CF
Sbjct: 53 DEEEIKEVIGELKELEAENRLYTPEKKVNRKLYEKGIVKAMCLHVSHDCNLACRYCFASG 112
Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTL--RY 171
+ K V++ + + A+ +I S EV F GG+PL L+ ++K ++
Sbjct: 113 GNFNMKKEVMNIETAKKAIDFIISNSGNKVHLEVDFFGGEPL-LNFDVVKKTVEYAKEEA 171
Query: 172 IKHVQILRF 180
KH +I RF
Sbjct: 172 KKHNKIFRF 180
>gi|85860714|ref|YP_462916.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
gi|85723805|gb|ABC78748.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
Length = 396
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 35/135 (25%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-------QEKSQIWEVIFTG 151
+ C + C +C+ ++G K +S A+ YI E S IW+ I G
Sbjct: 26 FIVTEDCQLRCGYCY---IIGKNKFNRMSFTIARTAVDYILHNRALFWEDSVIWDFI--G 80
Query: 152 GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----------NPELIQ 198
G+PL+ L + + + + + H P + R ++ +
Sbjct: 81 GEPLLEIELIDRICDYIKRRMYELDH----------PWFNSYRFSFSTNGLLYGTEKVQR 130
Query: 199 CLKEAGKPVYIAIHA 213
+++ + I+I
Sbjct: 131 FIRKNAHHLSISISI 145
>gi|332981504|ref|YP_004462945.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699182|gb|AEE96123.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
Length = 454
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L L H C + C +CF + T++++ AAL ++ S EV F GG+PL
Sbjct: 99 LHLSHDCNMRCSYCFASTGDFGGQRTLMTADTGRAALDFLVRHSGSRRHLEVDFFGGEPL 158
Query: 156 ILSH--KRLQKVLKTLRYI--KHVQ 176
+ K + + + L KH++
Sbjct: 159 MNFDAMKDIVEYGRRLEQSSGKHIR 183
>gi|322833884|ref|YP_004213911.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
gi|321169085|gb|ADW74784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
Length = 474
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 8/118 (6%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ ++ C YC FC R E V VL AA + V
Sbjct: 148 TAFVSIMEGCNKYCSFCVVPYTRGEEVSRPCDDVLFEVAQLAAQGVREVNLLGQNVNAYR 207
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
GD ++L+ + I + +RF + P+ ++I+ K+ + V
Sbjct: 208 GDAFEGGVCTFAELLRLVAAIDGIDRIRFTTSHPV----EFTDDIIEVYKDTPEVVSF 261
>gi|229115397|ref|ZP_04244804.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3]
gi|228668011|gb|EEL23446.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3]
Length = 383
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + Y E + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
GDPL+ + + + +R S P P + E IQ KE G +
Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121
Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
I H ++ + +I + L I + +V+ K D + +A L
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178
Query: 258 MRTF 261
+
Sbjct: 179 IEEL 182
>gi|218506865|ref|ZP_03504743.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
Length = 135
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 105 CPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
C C +C R Q+ + + AA+ + + + GG P ++ +
Sbjct: 6 CAAKCPYCDFNSHVRHQPVDQERFAAAFLNETAAVRAMSGPKTVTSIFLGGGTPSLMKPE 65
Query: 161 RLQKVLKTLRYIKHV 175
+ +L ++ HV
Sbjct: 66 TVAAILDSIARHWHV 80
>gi|164686956|ref|ZP_02210984.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM
16795]
gi|164603841|gb|EDQ97306.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM
16795]
Length = 166
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
CP +C+ CF E G ++ + L I + S ++ GG+PL
Sbjct: 23 TQGCPHHCKGCFNGETWDFNSGKEFKKENLDYILENINKNSVQRDLSILGGEPL 76
>gi|299531597|ref|ZP_07045002.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
S44]
gi|298720313|gb|EFI61265.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
S44]
Length = 380
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 46/244 (18%)
Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ ++LS ++ + ++ TGG+
Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
PL+ K ++ ++ L + R P P + + LKEAG
Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGQPLDLTLTTNASLLARKARALKEAGL 150
Query: 206 PVYIA-------IHANHPYEFS---EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254
+ + +A I AG+ + V+ +G NDD +
Sbjct: 151 NRVTVSLDGLDDTVFRRMNDVDFPVTDVLAGIEAAQTAGLSHIKVNMVVKRGTNDD--QI 208
Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312
+ R F I T+ +R+ + +++A L+ ++ P
Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263
Query: 313 LPGG 316
PG
Sbjct: 264 APGE 267
>gi|228924516|ref|ZP_04087716.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835141|gb|EEM80582.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 378
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
P ++ +L C + C C R E + L+ ++ + + Y + + +FTG
Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDVYEMDNPML---VFTG 70
Query: 152 GDPLILSH 159
GDPL+
Sbjct: 71 GDPLMHPD 78
>gi|169343771|ref|ZP_02864770.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
C str. JGS1495]
gi|169298331|gb|EDS80421.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
C str. JGS1495]
Length = 331
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C + +++ + + I +V TGG+PL+
Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79
Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
+ + ++K + I ++ +
Sbjct: 80 -REGIVDLIKNINKIPEIEEI 99
>gi|167768199|ref|ZP_02440252.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1]
gi|317499083|ref|ZP_07957362.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium
5_1_63FAA]
gi|167709723|gb|EDS20302.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1]
gi|291560220|emb|CBL39020.1| iron-only hydrogenase maturation protein HydG [butyrate-producing
bacterium SSC/2]
gi|316893603|gb|EFV15806.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium
5_1_63FAA]
Length = 472
Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C + L+ ++ + + +Q+ +
Sbjct: 80 YGNRIVMFAPLYLANYCVNGCTYCPYHYKNKHIRRKKLTQEEIKKEVIALQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
TG DP+ + + + + +KT+ IKH
Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYSIKH 165
>gi|323704599|ref|ZP_08116177.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536061|gb|EGB25834.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 466
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
EE +L +D I + + + I + Y +RI+ L + + C CR+C +
Sbjct: 43 TPEEAAVLLNLEDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH- 101
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
Q+ L+ + + ++E + G DP+ + V+KT+
Sbjct: 102 SNEQERKRLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155
>gi|254489978|ref|ZP_05103173.1| molybdenum cofactor biosynthesis protein A [Methylophaga
thiooxidans DMS010]
gi|224465063|gb|EEF81317.1| molybdenum cofactor biosynthesis protein A [Methylophaga
thiooxydans DMS010]
Length = 335
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + C C +C EM + +L+ ++ + E + +V TGG+PLI
Sbjct: 19 VRMSITDRCDFRCVYCMDEEMTFMPREQLLTLEEIVFLMRAFCE-LGVEKVRITGGEPLI 77
Query: 157 LSHKRLQKVLKTLRYIKH 174
+ + + + + +KH
Sbjct: 78 --RRNVDWLFEQIGQLKH 93
>gi|110681057|ref|YP_684064.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
denitrificans OCh 114]
gi|123361551|sp|Q161G5|MIAB_ROSDO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|109457173|gb|ABG33378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
denitrificans OCh 114]
Length = 441
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
ED + P R P L + C +C FC R V VL
Sbjct: 132 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 187
Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E + I Q + G D + K L +++ L I ++ +RF + P
Sbjct: 188 RDLVERGVREITLLGQNVNAYHGAGADG---NEKTLAQLIWALNDIDGLERIRFTTSHPN 244
>gi|91774915|ref|YP_544671.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
gi|91708902|gb|ABE48830.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
Length = 329
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C L+ ++ E + + + V TGG+PL+
Sbjct: 21 LSVTDRCDLRCHYCMPVGFSDYEIPDNWLTFEEIERVVNAFAK-LGVNAVRVTGGEPLLR 79
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
L ++ L I + + +
Sbjct: 80 KD--LATLISNLSRINGLSDISLST 102
>gi|10639798|emb|CAC11770.1| coenzyme PQQ synthesis protein related protein [Thermoplasma
acidophilum]
Length = 401
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 32/189 (16%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148
P I + C + C C ++ + + ++ ++ + + VI
Sbjct: 41 KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 96
Query: 149 FTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
TGGD +L R+ ++ LR I S P V + E I KE G
Sbjct: 97 LTGGD--MLRKHRIWDIMDYLRSQEIPF-------SVSPAVT-DLLTHEAILKFKEFGVS 146
Query: 207 VYIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILA 255
++I + E E+ AI L + GI + +V+++ ++D P +L
Sbjct: 147 -SVSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLK 205
Query: 256 NLMRTFVEL 264
++ V++
Sbjct: 206 LIIDKGVKV 214
>gi|56708793|ref|YP_164834.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ruegeria
pomeroyi DSS-3]
gi|56680478|gb|AAV97143.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria pomeroyi DSS-3]
Length = 462
Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 75 EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
D ++ LKG L + C +C FC R V +L
Sbjct: 151 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 210
Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ E + I Q + G P L ++ L I ++ +RF + P
Sbjct: 211 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 266
>gi|331003287|ref|ZP_08326791.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412636|gb|EGG92020.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 714
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
+ C + C++C+ ++ S+ ++ + AL Y + + F GG+PL+
Sbjct: 23 FTVTQNCNLACKYCYEKKNNDSRMSIKVAKDAVDFALRY-GQHTNRARFDFMGGEPLLEI 81
Query: 157 -LSHKRLQKVLKTLRYIKH 174
+ + + + L H
Sbjct: 82 NMIDELMDYIKFKLYEENH 100
>gi|317484667|ref|ZP_07943568.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
gi|316924023|gb|EFV45208.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
Length = 397
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 23/114 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
++ C + C+ C G LS+++ +A + + +IFTGGDP+I
Sbjct: 55 WEVTRSCNLACKHCRAEAHPEPYPGE-LSTEEAKALIDTF---PSVGNPIIIFTGGDPMI 110
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQ--RINPELIQCLKEAGKP 206
+++ S+ ++ P I PE + +KEAG
Sbjct: 111 RPDVY--ELIAYA-----------GSKGLRCVMSPNGTLITPENARKIKEAGVQ 151
>gi|285808444|gb|ADC35970.1| conserved hypothetical protein [uncultured bacterium 98]
Length = 358
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 43/191 (22%)
Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
C + C FC + +V + ++ + A A V+ G+PL
Sbjct: 112 GCAMACGFCLTGKMGLVRNLTAGEIAGQVRVLAAATGLADQAFNIVLMGMGEPLHNYDNT 171
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL------IQCLKEAGK--PVYIAIHA 213
++ + + + +H + P+R+ ++ L + +++HA
Sbjct: 172 MKAL--RMLHSEH---------GLSISPRRVTLSTVGIVPGLERLAREPLMPNLAVSLHA 220
Query: 214 NHPYEFSEEAIAAI----SRLANAGIILLSQS-------------VLLKGINDDPEILAN 256
++E +A+ + A II Q VLL G+ND PE
Sbjct: 221 T-----TDEQRSALVPPNRKYPLADIIAACQRFPLKQRSRITFEYVLLDGVNDSPEDARR 275
Query: 257 LMRTFVELRIK 267
L+R +R K
Sbjct: 276 LVRLLAGIRAK 286
>gi|298706473|emb|CBJ29460.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 369
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 77 PIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
P +++ S G H Y + + L C + C +C + V Q + + ++ L
Sbjct: 34 PGHEHSMLSDTHGRHHNY---LRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRL 90
Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
A + + + ++ TGG+PL+ L +++ L ++ V+ +
Sbjct: 91 ASMFVDAGVDKIRLTGGEPLVRKD--LPDIVRALSSLEGVRNV 131
>gi|297538387|ref|YP_003674156.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
gi|297257734|gb|ADI29579.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
Length = 409
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
N+ I P +L ++ + CP++C FC+ L+++ AL ++
Sbjct: 20 QNNGVAANITQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARK 79
Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
I ++ +GG+PL+ ++ ++ R +
Sbjct: 80 MGAI-QLGISGGEPLLRDD--IEDIVIEARKL 108
>gi|281425800|ref|ZP_06256713.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
gi|281400061|gb|EFB30892.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
Length = 446
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R LK+ C +C +C G + ++S +A A + +I + TG +
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209
Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+H++ ++K L ++ ++ R S ++P I+ +LI E+
Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262
Query: 211 IHA 213
H
Sbjct: 263 PHF 265
>gi|258406367|ref|YP_003199109.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798594|gb|ACV69531.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
Length = 465
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 10/117 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+ + CP C +C R + S E Y ++ + + F D
Sbjct: 225 PEYAPILGSRGCPYGCEYCASRHLYSGFVQRSFESVWQEFRAQY---QAGVRDFAFY-DD 280
Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVY 208
L+L L L + + + +R H+ P Q + PE+ + L AG
Sbjct: 281 ALLLRPTTWLLPFLHQICELP--EPIRLHT--PNAMHVQALTPEVCRALFRAGLTTI 333
>gi|327440950|dbj|BAK17315.1| 2-methylthioadenine synthetase [Solibacillus silvestris StLB046]
Length = 449
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 13/125 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
R LK+ C +C FC G + + + + Y++
Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEEVIRQAQQLVDAGYLEIVLTGIHTGG 206
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
G D L ++L+ L +K ++ LR S ++ ++ E+I L+ + V
Sbjct: 207 YGQD---FKDYNLAQLLRDLEAQVKGLKRLRISS----IEASQLTDEVIDVLQNSEI-VV 258
Query: 209 IAIHA 213
+H
Sbjct: 259 NHLHI 263
>gi|307822344|ref|ZP_07652576.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
tundripaludum SV96]
gi|307736910|gb|EFO07755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
tundripaludum SV96]
Length = 438
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 19/126 (15%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
+ + ++ C YC FC V S+ + +A I K + E+ G +
Sbjct: 135 KAFVSVMEGCSKYCTFC-----VVPYTRGEEISRPLDDVIAEITSLAKQGVREINLLGQN 189
Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ + +L + ++ + +RF + P ELI+ E
Sbjct: 190 VNAYRGEMDDGDIADFALLLHYVAAVEGIDRIRFTTSH----PMEFTDELIEAFAEIP-Q 244
Query: 207 VYIAIH 212
+ +H
Sbjct: 245 LVDHLH 250
>gi|222102888|ref|YP_002539927.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
gi|221739489|gb|ACM40222.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
Length = 342
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143
G++ R+ R+ L + C + C +C M K VLS + E A+A+I+
Sbjct: 13 GLIDRFGRRVTYLRLSVTDRCDLRCMYCMPENMTFMPKRDVLSIDELERLAVAFIRS--G 70
Query: 144 IWEVIFTGGDPLI 156
+ + TGG+PL+
Sbjct: 71 VTRIRLTGGEPLV 83
>gi|134278002|ref|ZP_01764717.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 305]
gi|226199930|ref|ZP_03795480.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei Pakistan 9]
gi|254177591|ref|ZP_04884246.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei ATCC 10399]
gi|254191326|ref|ZP_04897830.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei Pasteur 52237]
gi|254195707|ref|ZP_04902133.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei S13]
gi|254199311|ref|ZP_04905677.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei FMH]
gi|254205625|ref|ZP_04911977.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei JHU]
gi|254296954|ref|ZP_04964407.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 406e]
gi|134251652|gb|EBA51731.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 305]
gi|147748907|gb|EDK55981.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei FMH]
gi|147753068|gb|EDK60133.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei JHU]
gi|157808020|gb|EDO85190.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 406e]
gi|157938998|gb|EDO94668.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei Pasteur 52237]
gi|160698630|gb|EDP88600.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei ATCC 10399]
gi|169652452|gb|EDS85145.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei S13]
gi|225927986|gb|EEH24023.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei Pakistan 9]
Length = 227
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 12 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+P I L I V+ L
Sbjct: 69 GGEPSI--DPALA------ASIDDVRRL 88
>gi|228476318|ref|ZP_04061019.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|314936068|ref|ZP_07843417.1| radical SAM superfamily domain protein [Staphylococcus hominis
subsp. hominis C80]
gi|228269601|gb|EEK11107.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|313655885|gb|EFS19628.1| radical SAM superfamily domain protein [Staphylococcus hominis
subsp. hominis C80]
Length = 381
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C + ++ L L I + + TGG+P +
Sbjct: 34 VEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEI---PNLRTMSITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
S K + V+K L H + + + PQ E+ + + +H +H
Sbjct: 90 FSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYID--------VMHISHN 141
Query: 216 ---PYEFSEEAIAAISR 229
EF+E A+ +
Sbjct: 142 WGTIQEFAEVGFGAMKK 158
>gi|255659775|ref|ZP_05405184.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
20544]
gi|260847845|gb|EEX67852.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
20544]
Length = 455
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 29/164 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
+K+ C C FC + G + S+ E ++ ++ + EV+ D
Sbjct: 145 TAYVKIAEGCNNRCAFCAIPYIRGDYR-----SRRIEDICDEVRHLTENGVREVVLIAQD 199
Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
+ +L ++L+ + + +Q +R P+ + ELI+ + K
Sbjct: 200 STEYGRDLYGAPKLSELLREIVKVPKLQWVR----TLYSYPKYFSDELIETIASEPKICK 255
Query: 208 YIAIHANHP-----YEF-----SEEAIAAISRLANA--GIILLS 239
Y+ + H EE A I +L G+ + S
Sbjct: 256 YVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRERIPGVTIRS 299
>gi|217420779|ref|ZP_03452284.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 576]
gi|217396191|gb|EEC36208.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 576]
Length = 227
Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 12 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+P I L I V+ L
Sbjct: 69 GGEPSI--DPALA------ASIDDVRRL 88
>gi|291549607|emb|CBL25869.1| Fe-S oxidoreductase [Ruminococcus torques L2-14]
Length = 342
Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 95 DRILLKLLHVCPVY-CRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
+ ++L++ C C FC F R + + + D+E A Y
Sbjct: 16 ESLMLRVTRGCHWNKCYFCDLYKKYKFSRRRYEEIEEDLKKAADSEYAQNY-------TT 68
Query: 147 VIFTGGDPLILSHKRLQKVLKT----LRYIKHVQI 177
GD +L + L ++L+ L IKHV
Sbjct: 69 CFLQDGDAFVLRTEFLMQILEGIHKYLPNIKHVTT 103
>gi|242398860|ref|YP_002994284.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM
739]
gi|242265253|gb|ACS89935.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM
739]
Length = 586
Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 33/177 (18%)
Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEV 147
HR +L + L + C + C +CF G Q + + L + + I V
Sbjct: 133 HRSHTNLLNIVLTNRCNLSCWYCFFYHKEG-QPVYEPTLEQIRMMLRNAKSEEPIGANAV 191
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA 203
FTGG+P + + H+Q +RF PEL++ ++EA
Sbjct: 192 QFTGGEPSLRDDIIEIIKIAKEEGYDHIQFNTDGIRFA----------FEPELVKRVREA 241
Query: 204 GKPVYIAIHA----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
G + + NH E + + GI+L+ L++ +ND
Sbjct: 242 GVNTFY-LSFDGVTPKTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDH 293
>gi|320165712|gb|EFW42611.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 429
Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
+ L + P+ +A+H++ E E I A SRL + L +QS L
Sbjct: 277 VNLLDQYNMSPLLVAVHSSASNEILAELIRAGSRLHDIHYTLDNQSPL 324
>gi|315586279|gb|ADU40660.1| possible 2-methylthioadenine synthase [Helicobacter pylori 35A]
Length = 418
Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V + + K E + + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189
Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ + +++K L I ++ +R S
Sbjct: 190 VGSYGKDKGSNIVRLIKKLSQIAGLKRIRIGS 221
>gi|283852881|ref|ZP_06370142.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B]
gi|283571710|gb|EFC19709.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B]
Length = 350
Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%)
Query: 96 RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWE 146
L C + C FC FRR M + A Y+ EK +
Sbjct: 101 TACLSTQVGCAMGCAFCATGMMGFRRNMTPGEMLG-----QVLVARQYLLEKGVALALRN 155
Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
++F G G+PL+ ++KTL + H Q R V + L+ +
Sbjct: 156 LVFMGMGEPLLNYDN----LVKTLEALHHPQGFDISGRRITVSTAGVARHLLDLGRTGLC 211
Query: 206 PVYIAIHANHPYEFSEEAIAAI----SRL-ANAGIILLSQSV------------LLKGIN 248
+ +++HA ++ I ++L I +L Q +L G+N
Sbjct: 212 SLAVSLHAP-----TQALREKIMPGAAKLPLGELIEILRQYPMKPRERLTFEYLMLDGVN 266
Query: 249 DDPEILANLMRTFVELRIK 267
D E L+R ++ K
Sbjct: 267 DSLEDARELVRLLSRVKAK 285
>gi|300087524|ref|YP_003758046.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527257|gb|ADJ25725.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 400
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +K+ C C +C V +K V K + A + + EV+ TG +
Sbjct: 127 RTRSFIKIQDGCDYRCAYCI-VPTVRPRKSAVPVEKVIDEIRA--RRREGCREVVLTGTE 183
Query: 154 P--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
+ L ++ + ++ LR S + P+ I PEL+ C + +
Sbjct: 184 IGEYRTGNTALAGLIDAVLKETDIERLRISS----LQPREITPELMACWRNPR----MCR 235
Query: 212 HA 213
H
Sbjct: 236 HF 237
>gi|317151835|ref|YP_004119883.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942086|gb|ADU61137.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 289
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEVIF 149
D ILL++ C C FC G+ +G KD E + I + + V
Sbjct: 15 DSILLQVTLGCSHGKCAFC------GAYQGKRFGIKDRETVVRDIAFAARHCRRQRRVFL 68
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182
GD +IL RL ++L +R + V R +
Sbjct: 69 CDGDAMILPQPRLLEILADIRRELPWVT--RVGT 100
>gi|254429447|ref|ZP_05043154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
gi|196195616|gb|EDX90575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
Length = 445
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149
+ ++ C YC FC V S+ + L+ IQ + EV
Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLSEIQHLADMGVREVNLLGQNV 203
Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201
G D L L +++ +R I + +R+ + P+ ++ ++ + +
Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSDALIQVYEDVPELVS 260
Query: 202 EAGKPV 207
PV
Sbjct: 261 HLHLPV 266
>gi|94264953|ref|ZP_01288725.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93454609|gb|EAT04884.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 358
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 77 PIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
P+ +++ + P + LL C + CR C+ ++ + +
Sbjct: 4 PMNEHHPQQSPRTLFFKPGERNVFFHLLTACNLSCRHCYIN--PDQHGRATVTRAEIDHW 61
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
LA + Q V+F GG+P L + L
Sbjct: 62 LARLAAPEQQSNVVFLGGEP-SLHPELLH 89
>gi|78187582|ref|YP_375625.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
gi|78167484|gb|ABB24582.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
Length = 438
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 24/144 (16%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R LK+ C C +C R + VL A Y E++
Sbjct: 147 RTRAFLKIQDGCDYLCAYCTIPLARGRSRSIEPEDVLRQAHRLAGSGY-------REIVL 199
Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+G GD +L+ L + V +R S ++P ++P +Q + + +
Sbjct: 200 SGVNTGDYRSGGVDF-PALLRMLEEVP-VSRIRISS----LEPDMLSPAFLQVVGSSAR- 252
Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229
I H + P S+ + A+ R
Sbjct: 253 --IVPHFHLPLQSGSDPVLRAMRR 274
>gi|15678994|ref|NP_276111.1| pyruvate formate-lyase activating enzyme related protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622075|gb|AAB85472.1| pyruvate formate-lyase activating enzyme related protein
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 304
Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 105 CPVYCRFC--FRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
CP C +C +R +G V + + + A+ I+ +I + FTGG+P +
Sbjct: 52 CPFRCAYCNAYRISQYPHSGWIYRGHVEAEELADEAITAIKSHERISNISFTGGEP-SIH 110
Query: 159 HKRLQKVLKTLRY 171
++++++ +R
Sbjct: 111 TPYIEELVRRVRE 123
>gi|317476990|ref|ZP_07936232.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
1_2_48FAA]
gi|316906783|gb|EFV28495.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
1_2_48FAA]
Length = 432
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150
LK+ C C +C + G + ++ + Y+ + + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVTRGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D + + L ++++ + + V+ +R H P P +L + ++E
Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244
>gi|288926974|ref|ZP_06420870.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
gi|288336257|gb|EFC74642.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
Length = 275
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 20/118 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147
LK+ C +C +C M G + + L ++E E+
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ G D + H + +++ + I V+ +R H P P +L+ ++E
Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPN 244
>gi|167581236|ref|ZP_02374110.1| radical SAM domain protein [Burkholderia thailandensis TXDOH]
Length = 239
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 24 YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GG+P I L + +R +
Sbjct: 81 GGEPSI--DPALAAAIDDVRRL 100
>gi|320538377|ref|ZP_08038252.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
gi|320144762|gb|EFW36503.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
Length = 454
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 19/127 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ R LK+ C C +C R + ++ ++ A A E E++ +G
Sbjct: 167 LFHSRATLKIQDGCNSACAYC-RIRFARGKSVSLPVTEVIRRAQA--IEDEGFAELVLSG 223
Query: 152 GDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
+ LS K VL+ L + + H R+ + P+ I P ++ +
Sbjct: 224 ---VNLSQYKSEGKNFADVLQQLLD----ETKKIHIRISSLYPESITPTFLKVAENPR-- 274
Query: 207 VYIAIHA 213
IA H
Sbjct: 275 --IAPHF 279
>gi|209525671|ref|ZP_03274208.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
gi|209493840|gb|EDZ94158.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
Length = 436
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
+ +++ C C +C + G+++ + A + + ++ +
Sbjct: 132 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 189
Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D P R L +L + I ++ +RF + P LI+ E
Sbjct: 190 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 245
Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
K + H + P + + A++R
Sbjct: 246 K---VCEHFHIPFQSGDNDVLKAMAR 268
>gi|195473019|ref|XP_002088794.1| GE18764 [Drosophila yakuba]
gi|194174895|gb|EDW88506.1| GE18764 [Drosophila yakuba]
Length = 255
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 14/63 (22%)
Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPD 275
E + A+ A+ RL ++G VL+K + N + A L + D
Sbjct: 18 DEPTPNAVEALKRLRDSG-------VLVKFVTNTTKDSKATLHERLCRIG------FQLD 64
Query: 276 LAA 278
+
Sbjct: 65 PSE 67
>gi|157964955|ref|YP_001499779.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
MTU5]
gi|229890633|sp|A8F2U6|MIAB_RICM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157844731|gb|ABV85232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
MTU5]
Length = 450
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)
Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
D + + L YP + + C +C FC V S++ E
Sbjct: 134 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 186
Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
+ +V+ +G ++L + L +LK L I +++ L
Sbjct: 187 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 240
Query: 179 RFHSRVPI 186
R+ + PI
Sbjct: 241 RYITSHPI 248
>gi|119897481|ref|YP_932694.1| pyrroloquinoline quinone biosynthesis protein PqqE [Azoarcus sp.
BH72]
gi|119669894|emb|CAL93807.1| pyrroloquinoline quinone synthesis protein E [Azoarcus sp. BH72]
Length = 384
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ + ++ T LS++D L + + + F+GG+PL+
Sbjct: 19 LLAEVTYRCPLHCAFCY-NPVDFARDDTELSTEDWLRVLREARAAGSV-QCGFSGGEPLM 76
Query: 157 LSHKRLQKVLKTLRYI 172
L+ ++ +
Sbjct: 77 RDD--LEVLVAEAHRL 90
>gi|83720018|ref|YP_442340.1| radical SAM domain-containing protein [Burkholderia thailandensis
E264]
gi|167619323|ref|ZP_02387954.1| radical SAM domain protein [Burkholderia thailandensis Bt4]
gi|257138539|ref|ZP_05586801.1| radical SAM domain-containing protein [Burkholderia thailandensis
E264]
gi|83653843|gb|ABC37906.1| radical SAM domain protein [Burkholderia thailandensis E264]
Length = 239
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 24 YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80
Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
GG+P I L + +R +
Sbjct: 81 GGEPSI--DPALAAAIDDVRRL 100
>gi|99080026|ref|YP_612180.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
gi|123077818|sp|Q1GK98|MIAB_SILST RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|99036306|gb|ABF62918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
Length = 440
Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 13/110 (11%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
L + C +C FC R V VL + E + I Q +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVDRVLREAEDLVERGVREITLLGQ-NVNAY 208
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
G P L +++ L I ++ +RF + P + +LI+
Sbjct: 209 HGAGP--NGDMTLAQLIWELDKIDGLERIRFTTSHPND----MMDDLIEA 252
>gi|308371235|ref|ZP_07424286.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu003]
gi|308329484|gb|EFP18335.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu003]
Length = 334
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 6 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 64
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 65 PD--LPEIVRTLSA 76
>gi|304437669|ref|ZP_07397621.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369302|gb|EFM22975.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 429
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139
PL G+ HR R LK+ C +C FC G K L+ +++ E A
Sbjct: 131 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 185
Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ EV+ T G D + L +T K V+ LR S
Sbjct: 186 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 231
>gi|284050979|ref|ZP_06381189.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Arthrospira
platensis str. Paraca]
Length = 452
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
+ +++ C C +C + G+++ + A + + ++ +
Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205
Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D P R L +L + I ++ +RF + P LI+ E
Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261
Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
K + H + P + + A++R
Sbjct: 262 K---VCEHFHIPFQSGDNDVLKAMAR 284
>gi|237737580|ref|ZP_04568061.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC
9817]
gi|229419460|gb|EEO34507.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC
9817]
Length = 471
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + + C C +C + L+ ++ + +++ V+ G DP+ S
Sbjct: 92 LYVSNYCVNNCVYCGYQHCNEDLNRKKLTREELVNEVKALEKLGHKRIVLEAGEDPINCS 151
Query: 159 HKRLQKVLKTLRYIK----HVQILRF 180
+ + +K + IK +++ +
Sbjct: 152 LDYILQCIKDIYSIKFENGNIRRINI 177
>gi|218264182|ref|ZP_03478066.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
DSM 18315]
gi|218222228|gb|EEC94878.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
DSM 18315]
Length = 293
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWEVIFTGG 152
+++ + + + C C FC G +KG S + L QI E+ F+GG
Sbjct: 7 NKLRILVTNKCNYQCPFC---HNEGQEKGVKFSMMSFDSFKMLIDFLNDQQISEINFSGG 63
Query: 153 DPLILSHKRLQKVLKTLRYIK-HVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+P + ++++K + Y H++ + + + I E I LK I
Sbjct: 64 EPFLH-----KEIVKMICYADQHMKCDISCATNL-----SLITDEQIDILKGTRVKFNIQ 113
Query: 211 IHANHPYEFSEEA 223
EFS+
Sbjct: 114 FPFISEKEFSKST 126
>gi|182439559|ref|YP_001827278.1| hypothetical protein SGR_5766 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468075|dbj|BAG22595.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 779
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 24/129 (18%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY----IQEKSQIW----- 145
+LK+ C + C C+ V S++ + A+++ + E +
Sbjct: 12 VLKVHSRCDLACDHCY----VYEHADQSWSTRPRTISDEAISWTARRLAEHATTHALPSV 67
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE 202
VI GG+PL+ RL++V + L + LR H+ +++P + E
Sbjct: 68 TVILHGGEPLLAGPARLRRVCEELGSALNGIAELDLRIHTNGV-----QLSPRYLDLFDE 122
Query: 203 AGKPVYIAI 211
V I++
Sbjct: 123 FHVRVGISL 131
>gi|167969718|ref|ZP_02551995.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis H37Ra]
gi|215405104|ref|ZP_03417285.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis 02_1987]
gi|215432065|ref|ZP_03429984.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis EAS054]
gi|218754879|ref|ZP_03533675.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis GM 1503]
gi|219559151|ref|ZP_03538227.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis T17]
gi|254552189|ref|ZP_05142636.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|308374774|ref|ZP_07437356.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu006]
gi|308340798|gb|EFP29649.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu006]
Length = 335
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 7 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 65
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 66 PD--LPEIVRTLSA 77
>gi|332975771|gb|EGK12652.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Desmospora sp. 8437]
Length = 448
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
R LK+ C +C FC G + S + + +I I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLLRSRKPESVLRQARQLVD--AGYKEIVLTGIHT 199
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
GG +L +L L ++ ++ +R S ++ +I+ +I L ++ K +
Sbjct: 200 GGYGEDFEDYKLADLLWDLDKVEGLKRIRISS----IEASQIDDRVIDVLNKSDK-MCRH 254
Query: 211 IHA 213
+H
Sbjct: 255 LHI 257
>gi|227824689|ref|ZP_03989521.1| RNA modification enzyme [Acidaminococcus sp. D21]
gi|226905188|gb|EEH91106.1| RNA modification enzyme [Acidaminococcus sp. D21]
Length = 435
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 45/196 (22%)
Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
+P E L +D DR LK+ C YC +C G
Sbjct: 128 LPVGSEFEDLAASVDDS----------------RDRAFLKIQEGCDQYCSYCIIPYARGH 171
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKH 174
+ LSS + ++ E+ V+ G + + +RL + +
Sbjct: 172 LRSRPLSS--IRREVEHLTEEGYKEVVLLGIHLGCYGKE--TANGERLSDAVSAALSVPA 227
Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-------------NHPYEFSE 221
+ LR S + + PEL++ ++E + +H N PY+ +
Sbjct: 228 LCRLRLGSLESV----EVQPELLRLMQEDPR-FCCHLHLPLQSGCDKILKAMNRPYD-TA 281
Query: 222 EAIAAISRLANAGIIL 237
I R+ A +
Sbjct: 282 RFKELIDRIRAAVPDV 297
>gi|206895115|ref|YP_002246513.1| tungsten-containing aldehyde ferredoxin oxidoreductase
cofactor-modifying protein [Coprothermobacter
proteolyticus DSM 5265]
gi|206737732|gb|ACI16810.1| tungsten-containing aldehyde ferredoxin oxidoreductase
cofactor-modifying protein [Coprothermobacter
proteolyticus DSM 5265]
Length = 356
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 32/186 (17%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
RI ++L C + C CFR ++ K + L + +I G+PL
Sbjct: 21 RIYVELSRACNLACAMCFR-HTYEDHTRALMDEKTVQKMLQEVVNSPAEEVIIGGIGEPL 79
Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI-- 211
+ + V+K L+ K V I + IN E+ + L + VYI++
Sbjct: 80 MHP--LWKNVVKELKNAYKRVTITTNGT--------LINREVAEFLVDQRVDEVYISVES 129
Query: 212 ----HANHPYEFSEEAIAAISRLANAG----IILLSQSVLLKG--INDDPEILANLMRTF 261
H N E + I+ L IL ++ VL K + D LM+
Sbjct: 130 SPLGHNN--VENTFAVGDLITELKQRKNKMRPILSAEVVLTKSSLVED-----LELMKKL 182
Query: 262 VELRIK 267
I+
Sbjct: 183 SRHGIR 188
>gi|218295831|ref|ZP_03496611.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23]
gi|218243569|gb|EED10097.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23]
Length = 349
Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 51/201 (25%)
Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
Y +R + L + CP C FC + G L++ + + L I +I
Sbjct: 89 YKNRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGLSPREIR 145
Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
V+ G G+PL+ L+ + + H + + P+RI + +
Sbjct: 146 NVVLMGMGEPLLNLTNVLKAI-----------RVMLHPKALAMSPRRITLSTVGIPRGIL 194
Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
+ G + +++HA H Y E R +
Sbjct: 195 RLAEEDVGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMAAVRRYYERTKRRVTFEYT-- 252
Query: 242 VLLKGINDD---PEILANLMR 259
LLKG+ND +LA L++
Sbjct: 253 -LLKGLNDHLWQARLLAKLLK 272
>gi|315923957|ref|ZP_07920185.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622797|gb|EFV02750.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
23263]
Length = 354
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R L++ ++C CR+C R G + L++++ A V+ +G D
Sbjct: 61 RGLIEFSNICRNDCRYCGIRRSNGRIERYRLTAEEILACCDQGYALGFRTFVLQSGEDTY 120
Query: 156 ILSHKRLQKVLKTLRYIKH 174
+ L ++ IKH
Sbjct: 121 Y-TDDALCALVAR---IKH 135
>gi|255011120|ref|ZP_05283246.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [Bacteroides fragilis 3_1_12]
gi|313148931|ref|ZP_07811124.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis 3_1_12]
gi|313137698|gb|EFR55058.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Bacteroides fragilis 3_1_12]
Length = 154
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 22/59 (37%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
C C C E Q G L+ K + + I + V F+GGDPL L
Sbjct: 25 GCRHGCPGCHNPESWNPQAGDELTEKRLDCIIREINSNPLLDGVTFSGGDPLYNPEAFL 83
>gi|257792682|ref|YP_003183288.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
gi|257476579|gb|ACV56899.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
Length = 475
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 15/117 (12%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
+R+ + C CR C S L D + + + I EV
Sbjct: 90 QNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGILEV 144
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
TGG+PL+ +++ L +R + + ++ +L+ L+E G
Sbjct: 145 SLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEERG 193
>gi|189423541|ref|YP_001950718.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189419800|gb|ACD94198.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 828
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 34/184 (18%)
Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
+ R+F+P E D SP+ + DR+ +++ C CRFC
Sbjct: 224 VRRRFLPDIE------------AADFPDSPIIPFLKTIHDRVAIEVARGCTRGCRFCQAG 271
Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
+ + S + + + +I + + GD + +L+ L
Sbjct: 272 YIYRPLRER--SPQRINELIETSLKNTGYEEISLLSLSTGDY-----SCIAPLLQELMA- 323
Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLA 231
+H Q R +P + + PELI +++ K + + EA + R+
Sbjct: 324 RHAQG-RVAVSLPSLRVGTLTPELIDEIRKVRKTGFT---------LAPEAGSERMRRVI 373
Query: 232 NAGI 235
N GI
Sbjct: 374 NKGI 377
>gi|253989291|ref|YP_003040647.1| hypothetical protein PAU_01811 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780741|emb|CAQ83903.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 353
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEV 147
+YP+ + + C C+ C +V + + +I + V
Sbjct: 11 KYPNTATVITTYTCNAACKECC-----FECNPSVKARLSLDEIKQFIVHSKANFPGLKLV 65
Query: 148 IFTGGDPLILSHKRLQKV 165
+F+GG+ +L ++ +
Sbjct: 66 VFSGGECFLLGKDLIEAI 83
>gi|325968827|ref|YP_004245019.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
gi|323708030|gb|ADY01517.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 380
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148
+ P + + CP+ CR C R + T LS+++++ + + + + V+
Sbjct: 14 LEEKPLLVFYETTKACPLACRHC-RANALLKPLPTELSTEESKRFIEDLTGFGKPYPVLI 72
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPV 207
TGGDPL L+ I H + L + P V + +N +L++ L+E +
Sbjct: 73 LTGGDPLT-RDDILE-------LIDHAKSLGIPVALSPAVSTKLLNDDLLKELRERVNSI 124
Query: 208 YIAI 211
I++
Sbjct: 125 SISL 128
>gi|319795394|ref|YP_004157034.1| radical SAM protein [Variovorax paradoxus EPS]
gi|315597857|gb|ADU38923.1| Radical SAM domain protein [Variovorax paradoxus EPS]
Length = 212
Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 15/95 (15%)
Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFTGGDPLILSHK 160
CRFC + VG+ K + I ++ V+ TGG+PL+
Sbjct: 43 SAVCRFCD-TDFVGTDGTLGGKFKTADQLADTIAAQWPANDAEHRLVVLTGGEPLLQVD- 100
Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRIN 193
++ L H + R S + P+ I+
Sbjct: 101 --AALVDAL----HARRFRIAVESNGTVAAPEGID 129
>gi|310643698|ref|YP_003948456.1| astb/chur/nirj-like protein [Paenibacillus polymyxa SC2]
gi|309248648|gb|ADO58215.1| AstB/chuR/nirj-like protein [Paenibacillus polymyxa SC2]
Length = 397
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIF 149
P I +KL + C + C CF G ++ + A +++ ++ ++
Sbjct: 42 PQTIGIKLTNRCNLRCTHCFEWNEEGYHHQMDKEEQNMDLAPDMLRQILSETKEVKSRLY 101
Query: 150 T-GGDPLILSHKRLQKVLKTLRY 171
GG+P+ +R ++L L
Sbjct: 102 MWGGEPMFH--RRFDEILDVLAE 122
>gi|302533615|ref|ZP_07285957.1| radical SAM domain-containing protein [Streptomyces sp. C]
gi|302442510|gb|EFL14326.1| radical SAM domain-containing protein [Streptomyces sp. C]
Length = 751
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 35/188 (18%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEK------SQIWEV 147
I+LK+ C + C C+ E + V+S + + + E + V
Sbjct: 10 IVLKVHSRCDLACDHCYVYEHADQSWRARPKVISPEVISQTASRLAEHARDHALPSVT-V 68
Query: 148 IFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I GG+PL+ RL ++ + L + LR H+ +++ + E
Sbjct: 69 ILHGGEPLLAGPDRLRLVCEEFTRALAGTAGLD-LRIHTNGL-----QLSRRYLDLFAEY 122
Query: 204 GKPVYIAI---------H--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI---ND 249
G V +++ H +AA+ L +A L Q LL + ND
Sbjct: 123 GVRVGVSLDGDRAANDRHRRFADGRSSHPLVLAALELLRSAPYRHLYQG-LLCTVDVAND 181
Query: 250 DPEILANL 257
+L L
Sbjct: 182 PVAVLDAL 189
>gi|225387767|ref|ZP_03757531.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
DSM 15981]
gi|225046128|gb|EEG56374.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
DSM 15981]
Length = 491
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 45/176 (25%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + + VL T AA Y + +
Sbjct: 143 RTRAFIKVQDGCNQFCSYCIIPYARGRVRSRRPEEVLEEVRTLAAQGYKEMVLTGIHLSS 202
Query: 150 TGGD------PLILSHKR----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
G D LI + L ++++ + ++ + +R S ++P+ I
Sbjct: 203 YGLDFENPESALIAGDYKAEENALYRPWLLRLIQEVSGVEGIGRIRLGS----LEPRIIT 258
Query: 194 PELIQCLKEAGK-----PVY-----------IAIHANHPYEFSEEAIAAISRLANA 233
E L + K + + H N +EE L A
Sbjct: 259 REFAAELAKIPKLCPHFHLSLQSGCDATLKRMNRHYN-----TEEYRERCGILREA 309
>gi|296274304|ref|YP_003656935.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM
7299]
gi|296098478|gb|ADG94428.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM
7299]
Length = 368
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
LL+L H CP+ C +C+ + + K + ++ +D + + + ++ F+GG+PL+
Sbjct: 12 LLELTHKCPLECTYCYNQLDFANTKDS-MTKEDWFRVMEEARAMGAV-QLGFSGGEPLLN 69
Query: 158 SHKRLQKVLKTLRYIK 173
+ +++K +K
Sbjct: 70 KD--ILEIVKKAAELK 83
>gi|162447121|ref|YP_001620253.1| radical SAM superfamily Fe-S oxidoreductase [Acholeplasma laidlawii
PG-8A]
gi|205829657|sp|A9NEU7|RLMN_ACHLI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|161985228|gb|ABX80877.1| Fe-S-cluster redox enzyme, radical SAM superfamily [Acholeplasma
laidlawii PG-8A]
Length = 338
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 60/246 (24%)
Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAYIQEKSQ-- 143
+ H Y + C + C FC G + +D A I+ + +
Sbjct: 93 MSHNYGMSACVTTQVGCNIGCSFC--------ASGVLKKKRDLTAGEIVAQIIRAEKESG 144
Query: 144 --IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
+ ++ G G+P + +K + + H + L +R V L+ +
Sbjct: 145 VRVSSIVIMGIGEPF----DNYKNFVKFISIVNHPKGLAIGARHITVS----TSGLVPKI 196
Query: 201 KEAGK-----PVYIAIHANHPYEFSEEAIAAISRLANAG------------IILLSQSVL 243
KE + +++HA P E + + ++ + I + ++ V
Sbjct: 197 KEFAHLGIQVNLAVSLHA--PN---NEIRSKLMKINDRFKVEEVVDAIKYYIHVTNRRVT 251
Query: 244 LKGI-----NDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
++ I ND E L + + + PY + + R ++E
Sbjct: 252 IEYIMIQDLNDSVETAVELAKLLKGMNVYVNLIPY-----NTVKEADYQRSSLENRLAFH 306
Query: 295 ASLKEK 300
+LKE
Sbjct: 307 KTLKEH 312
>gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris CGA009]
gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris
CGA009]
Length = 344
Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M + +L+ ++ + + + ++ TGG+PL+
Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ + ++++L H++ L S++ R EL C + V ++
Sbjct: 86 RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135
Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
+ P EF A I AG+ + SV+LKG N+D
Sbjct: 136 LDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNED 183
>gi|313203239|ref|YP_004041896.1| hypothetical protein Palpr_0757 [Paludibacter propionicigenes WB4]
gi|312442555|gb|ADQ78911.1| conserved hypothetical protein [Paludibacter propionicigenes WB4]
Length = 318
Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 16/110 (14%)
Query: 109 CRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIF------TGGDPLILSHKR 161
C +C + K S+ E + + + K + + D L +
Sbjct: 53 CTYCNNQSFSPEYCKPIKTVSQQVEEGINFFKHKYENQFYLAYFQSYTNTYDSL----DK 108
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
L+ + + V+ + +R P +N EL+ +E K VY+ I
Sbjct: 109 LKAIYEEALSHPQVKGIVVGTR-----PDCVNDELLDYFEELSKSVYVMI 153
>gi|61845111|emb|CAI70376.1| beta 1,4 N-acetylglucosaminyltransferase [Populus tremula x Populus
alba]
Length = 388
Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 90 VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
VHRY R +L +C FCFRR K S D Y+
Sbjct: 264 VHRYQTGKTRYAHYRQADDILADAGWHCSFCFRRISEFIFKDEAYSHVDKSRVQRYL-NP 322
Query: 142 SQIWEVIFTGGDPL-ILSHK-RLQKVLKTLRYIKH 174
+I VI G D +L + ++++ + I H
Sbjct: 323 KRIQRVICKGADLFDMLPEEYTFKEIIGKMGPIPH 357
>gi|58617513|ref|YP_196712.1| hypothetical protein ERGA_CDS_07860 [Ehrlichia ruminantium str.
Gardel]
gi|58417125|emb|CAI28238.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 405
Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
R L+++ + C C FC + G+ + E + +++ + EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180
Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
D +S + + L I ++ LR S + + + I +LI +
Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231
Query: 203 AGKPVYIAIH 212
G H
Sbjct: 232 -GNEPRFMPH 240
>gi|262038001|ref|ZP_06011413.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
gi|261747954|gb|EEY35381.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
Length = 454
Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 45/251 (17%)
Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
+ +I L +P R D I + IV + CP +C FC++
Sbjct: 133 KMYISVHRSLENIPVVRRDLIKRERYLVPNSIV----------VTRGCPHHCDFCYKDAF 182
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
Q G ++ + AL I+ ++ D L+ + K +++ + ++ + V
Sbjct: 183 Y--QNGKSFYTRLVDDALKEIESLPGRH--LYFLDDHLLGNPKFAKELFEGMKGMNRVFQ 238
Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----------HANHPYEFSEEAIAAI 227
+ + I+ EAG +N + I +
Sbjct: 239 ------GAATIDSILTGDTIEKAAEAGLRSIFVGFETFSPENLKQSNKSQNLQRDYIKVV 292
Query: 228 SRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKP------YYLHHPDLAAGT 280
+RL + GI++ V G+ NDD ++ + V+ +K Y H GT
Sbjct: 293 NRLHSLGIMINGSFVF--GLDNDDKDV----FKRTVDWGVKNAITTSTY--HILTPYPGT 344
Query: 281 SHFRLTIEEGQ 291
F+ E+G+
Sbjct: 345 RLFKRMEEDGR 355
>gi|253572329|ref|ZP_04849732.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251838104|gb|EES66192.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 393
Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 17/114 (14%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147
R + I L + C C CF ++ K+ + I++ +I ++
Sbjct: 5 RKLESIFLFVTGKCNAKCAMCF--------YANDMAKKERDLTFEEIRKISETAGEINKL 56
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
+GG+P L + L ++L+ H++ + + P R+ E ++ +
Sbjct: 57 WVSGGEP-TLR-EDLPEILEMFYQNNHIKDVNMPTNGL--KPDRV-IEWVERFR 105
>gi|295696097|ref|YP_003589335.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
gi|295411699|gb|ADG06191.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
Length = 358
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
+ +VC +C FC+ R + +S + L Y++E I E GG
Sbjct: 58 INPTNVCEAHCGFCYYRRDPDQEGAYTMSP---DEVLEYVKERWTPGIREFHIVGG 110
>gi|289596878|ref|YP_003483574.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
T469]
gi|289534665|gb|ADD09012.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
T469]
Length = 308
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + C + C +C R + ++ + E L I + I +V FTGG+PL
Sbjct: 14 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 68
Query: 156 ILSH 159
+
Sbjct: 69 CRND 72
>gi|229828421|ref|ZP_04454490.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
14600]
gi|229793015|gb|EEP29129.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
14600]
Length = 450
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 25/135 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R +K+ C +C +C R + VL AA Y ++ + +
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPLARGRIRSRSPKDVLKEVRGLAASGY--QEVVLNGIHL 199
Query: 150 TGGDPLILSHKR-----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
+ + +++ L ++++ + ++ ++ +R S ++P+ ++ +
Sbjct: 200 SSY-GMTSYNRQVASEEMAGGGHLMELVEAVAGVEGIRRIRLGS----MEPRLVDRAFAE 254
Query: 199 CLKEAGKPVYIAIHA 213
L K I H
Sbjct: 255 RLARVEK---ICPHF 266
>gi|183982863|ref|YP_001851154.1| oxidoreductase [Mycobacterium marinum M]
gi|183176189|gb|ACC41299.1| conserved hypothetical oxidoreductase [Mycobacterium marinum M]
Length = 389
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 60/167 (35%), Gaps = 39/167 (23%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----------EV 147
++K +C + C++C+ E + T +S AL I++ + + ++
Sbjct: 4 VIKTSKLCNLRCKYCYEWEHLSD--PTRMSESVWRDALVAIRDYADLTTRRCGYDIPVDI 61
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV---------QILR--FHSRVPIVDPQRINPEL 196
I+ GG+P +L ++ + + ++ + +R + + + E
Sbjct: 62 IWHGGEPTLLP----REYFERVFALQREVFPSDWLQSRRVRNVLQTNL-----YSVRDEH 112
Query: 197 IQCLKEAGKPVYIAIHANHPYEFS-------EEAIAAISRLANAGII 236
+ E + I++ + + I RL + G+
Sbjct: 113 LDVFAEHDVELGISVDFAEGVRLTAGGKRTEAAVRSNIRRLQDRGLP 159
>gi|166710944|ref|ZP_02242151.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 343
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 15/114 (13%)
Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGT 124
LP P+ D + PL+ + L ++ C C +C + V G
Sbjct: 5 PLPNLATAPMQDRDGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSRQ 56
Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
LS E + + +V TGG+PL+ L ++ L I+ ++ L
Sbjct: 57 RLSFDQLETLVRAFVS-VGVAKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107
>gi|160885195|ref|ZP_02066198.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
gi|156109545|gb|EDO11290.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
Length = 439
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C G + ++S + T A A E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQTRQAAA-----EGGKEIVLTG 202
Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
GD + + ++K L + ++ R S ++P + E+I+ + +
Sbjct: 203 VNIGDFGKTTGESFFDLVKALDQVDGIERYRISS----IEPNLLTDEIIEFVSHSR---S 255
Query: 209 IAIHA 213
H
Sbjct: 256 FMPHF 260
>gi|241663687|ref|YP_002982047.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia
pickettii 12D]
gi|240865714|gb|ACS63375.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12D]
Length = 400
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
LN D + +P+ G P +L +L + CP++C FC + ++ L
Sbjct: 3 LNAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQEL 57
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+++ + + ++ +GG+PL+ L+TL H
Sbjct: 58 TTEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98
>gi|108756838|ref|YP_631100.1| radical SAM domain-containing protein [Myxococcus xanthus DK 1622]
gi|108460718|gb|ABF85903.1| radical SAM domain protein [Myxococcus xanthus DK 1622]
Length = 294
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 18/140 (12%)
Query: 101 LLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF--TGGDPLIL 157
L C C +C F + + + D E +A+++ ++Q +F G+ LI
Sbjct: 10 PLSSCNYGCEYCPFGKWK-HTDEELAKDRADLERFVAWVEARTQDTVSVFFTPWGEALIW 68
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
+ + L L ++ HV+ L + + + + ++ ++ H
Sbjct: 69 PWYQ--EALARLSHLPHVERLAIQTNLSCKL------DWVAGVRADKLGIWATYH----P 116
Query: 218 EFS--EEAIAAISRLANAGI 235
E++ +A ++L G+
Sbjct: 117 EWTKRHRFVAQCAKLTELGV 136
>gi|86750500|ref|YP_486996.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris HaA2]
gi|86573528|gb|ABD08085.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris HaA2]
Length = 345
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 41/174 (23%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C +M + +L+ ++ + + + + ++ TGG+PL+
Sbjct: 30 VSITDRCDFRCAYCMSEDMTFLPRADLLTLEELDRLCSAFIVR-GVRKLRLTGGEPLV-- 86
Query: 159 HKRLQKVLKTLRYIKHV---------------QILRF-------HSRVPIVDPQRINPEL 196
+ + ++++L H+ Q+ RF R V ++P
Sbjct: 87 RRNMMSLVRSLSR--HLDTGALRELTLTTNGSQLARFAAELRDCGVRRINVSLDTLDPAK 144
Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ + G EF IA I AG+ + +V+LKG+N+D
Sbjct: 145 FRAITRWG-------------EFDR-VIAGIEAARAAGLAVKINAVVLKGVNED 184
>gi|313201322|ref|YP_004039980.1| coenzyme pqq biosynthesis protein e [Methylovorus sp. MP688]
gi|312440638|gb|ADQ84744.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. MP688]
Length = 394
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ L+++ AL ++ + ++ +GG+PL+
Sbjct: 20 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 78
Query: 157 LSHKRLQKVLKTLRYI 172
++ +++ R +
Sbjct: 79 RDD--IEDIVREARQL 92
>gi|253999234|ref|YP_003051297.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylovorus
sp. SIP3-4]
gi|253985913|gb|ACT50770.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. SIP3-4]
Length = 395
Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L ++ + CP++C FC+ L+++ AL ++ + ++ +GG+PL+
Sbjct: 21 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 79
Query: 157 LSHKRLQKVLKTLRYI 172
++ +++ R +
Sbjct: 80 RDD--IEDIVREARQL 93
>gi|254168775|ref|ZP_04875616.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
gi|197622212|gb|EDY34786.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
Length = 300
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + C + C +C R + ++ + E L I + I +V FTGG+PL
Sbjct: 6 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60
Query: 156 ILSH 159
+
Sbjct: 61 CRND 64
>gi|170077243|ref|YP_001733881.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC
7002]
gi|238066620|sp|B1XPZ7|RIMO_SYNP2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|169884912|gb|ACA98625.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC
7002]
Length = 439
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEK 141
RY L++ C C FC + G Q+ + + + E + I
Sbjct: 137 RYRTTNEAVAYLRVAEGCDYRCAFCIIPHLRGDQRSRPIESIVAEAKQLAEQGVQEIILI 196
Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
SQI G D I +L ++L+ L + V +R H P PE+I ++
Sbjct: 197 SQITTNY--GKD--IYGKPKLAELLRALGGVD-VPWIRIHYAYPTGL----TPEVIAAMR 247
Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISR 229
+ + Y+ + H + + + A++R
Sbjct: 248 DTPNVIPYLDLPLQHSH---PDILRAMNR 273
>gi|145590325|ref|YP_001152327.1| putative molybdenum cofactor biosynthesis protein A [Pyrobaculum
arsenaticum DSM 13514]
gi|145282093|gb|ABP49675.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum arsenaticum DSM 13514]
Length = 310
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 30/216 (13%)
Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ C C FC G ++G+ L+++D ++ + + + TGG+PL+
Sbjct: 17 VNDECNYNCVFC---HFEGQLRRQGSYLTAEDYGFVSSFFRS-LGVADFKITGGEPLLRR 72
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
+ ++ + + V + + + L++AG + +++H P
Sbjct: 73 D--IDLIVANVAKT--------GAYVTVTTNGYLLRGWVDKLRKAGVARLNVSVHTTDPE 122
Query: 218 E----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
+ E + ++ + G+ L V+L+ IN D + + L++ L
Sbjct: 123 KYAKITSTSPAVFREVMRGLAEARDRGLSLKLNVVVLRDINTDRQSVKELVKLAARLGAS 182
Query: 268 PYYLHHPDLAAGTSHFR---LTIEEGQKIVASLKEK 300
++ +GT F IE +IV L +
Sbjct: 183 LQFIELMPTGSGTKIFDNLFEPIESIVEIVTQLGGR 218
>gi|148555801|ref|YP_001263383.1| beta-ketothiolase [Sphingomonas wittichii RW1]
gi|148500991|gb|ABQ69245.1| acetyl-CoA acetyltransferase [Sphingomonas wittichii RW1]
Length = 393
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 146 EVIFTGGDPLIL--SHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKE 202
E I TG ++L S L + + + HV + R+ +++ V+ + LI+ L +
Sbjct: 94 EAIVTGAKAMVLGESDIVLAGGAEVMSRVPHVVKGARWGTKMGNVE---MTDGLIEALSD 150
Query: 203 AGKPVYIAIHANHPYE---FSEEAIAAIS 228
V++ I A + E + EA A++
Sbjct: 151 PFDKVHMGITAENVAERYQITREAQDALA 179
>gi|148259214|ref|YP_001233341.1| radical SAM domain-containing protein [Acidiphilium cryptum JF-5]
gi|146400895|gb|ABQ29422.1| Radical SAM domain protein [Acidiphilium cryptum JF-5]
Length = 579
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGD 153
+ + +C + C C+ + + L L + ++ E+ TGG+
Sbjct: 299 ETLWFNTGTLCNLACEGCYIESSPRNDRLAWLRLDGFRRVLDEAADRHPELREIGLTGGE 358
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----VDPQRINPELIQCLKEAGKPVYI 209
P + ++ L + + RV + + P R + G+ +++
Sbjct: 359 PFMNPD------IEALIGMALDR----GYRVLVLTNAMTPMR--HHMAAIAGWRGRDLHL 406
Query: 210 AIHANHPYEFSEEAIA 225
+ +H E A+
Sbjct: 407 RVSLDHHTEAGHAALR 422
>gi|308232336|ref|ZP_07415756.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu001]
gi|308372426|ref|ZP_07428640.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu004]
gi|308373630|ref|ZP_07433114.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu005]
gi|308378192|ref|ZP_07481852.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu009]
gi|308379413|ref|ZP_07486196.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu010]
gi|308380573|ref|ZP_07490415.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu011]
gi|308214306|gb|EFO73705.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu001]
gi|308333330|gb|EFP22181.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu004]
gi|308336984|gb|EFP25835.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu005]
gi|308353341|gb|EFP42192.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu009]
gi|308357175|gb|EFP46026.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu010]
gi|308361126|gb|EFP49977.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu011]
Length = 344
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 16 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 74
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 75 PD--LPEIVRTLSA 86
>gi|164687312|ref|ZP_02211340.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
16795]
gi|164603736|gb|EDQ97201.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
16795]
Length = 476
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
Y +RI+ L L + C C +C + L+ + + +Q+
Sbjct: 79 RFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKTIARKKLTQDEIRREVIALQDMGHKRL 138
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DP+ + + + + T+ IKH
Sbjct: 139 ALEAGEDPVNNPIEYILECINTIYSIKH 166
>gi|52080450|ref|YP_079241.1| coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
ATCC 14580]
gi|52785831|ref|YP_091660.1| moaA/nifB/pqqE family protein [Bacillus licheniformis ATCC 14580]
gi|319645590|ref|ZP_07999822.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
gi|52003661|gb|AAU23603.1| Coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
ATCC 14580]
gi|52348333|gb|AAU40967.1| moaA / nifB / pqqE family [Bacillus licheniformis ATCC 14580]
gi|317392476|gb|EFV73271.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
Length = 367
Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 20/180 (11%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ P ++ +L C + C C + LS K+ + + I ++ TG
Sbjct: 8 KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELSLKEGKDLIDQIHAMDNPL-LVLTG 65
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
GDPL + +++ + +R S P P + E IQ KE G +
Sbjct: 66 GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117
Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I H + + AI + + L +V+ D + +A L++
Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVISSYNIDYLDEMAKLIKEL 177
>gi|237709650|ref|ZP_04540131.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
gi|229456286|gb|EEO62007.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
Length = 472
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DPL + + + ++T+ IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165
>gi|254168706|ref|ZP_04875548.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
gi|197622332|gb|EDY34905.1| probable molybdenum cofactor biosynthesis protein A
[Aciduliprofundum boonei T469]
Length = 300
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ + C + C +C R + ++ + E L I + I +V FTGG+PL
Sbjct: 6 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60
Query: 156 ILSH 159
+
Sbjct: 61 CRND 64
>gi|144899591|emb|CAM76455.1| Fe-S oxidoreductase [Magnetospirillum gryphiswaldense MSR-1]
Length = 291
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)
Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149
D ++++ C C FC V + +D +A I V
Sbjct: 16 DNLIIQATLGCRFNGCTFCS-MYKVKEYRA-----RDLDAVYDDIAAAALAWPDAHRVFL 69
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILR 179
GD L L + L ++Q +
Sbjct: 70 ADGDAYNLPTDHLAAICDRLAATFPNLQRVT 100
>gi|297617643|ref|YP_003702802.1| hypothetical protein Slip_1474 [Syntrophothermus lipocalidus DSM
12680]
gi|297145480|gb|ADI02237.1| protein of unknown function DUF512 [Syntrophothermus lipocalidus
DSM 12680]
Length = 454
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 58/186 (31%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C C FCF ++ + ++ + D
Sbjct: 86 AVFDRLRTCRNRCLFCFMDQLPSGVRKSLRTKDD-------------------------- 119
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
RL + + ++ R + E I L+ + P+Y+++HA
Sbjct: 120 --DYRLSFLYGNFITLTNL--------------DREDWEAIAALRLS--PLYVSVHATDS 161
Query: 217 Y--------EFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262
E + I+ ++RL + G+ + +Q VL GIND LA+ T +
Sbjct: 162 RVRACMLGNEKGGQIISDLNRLRDLGLQVHTQVVLCPGINDGEVLAETVSTLASFWPTVL 221
Query: 263 ELRIKP 268
+ I P
Sbjct: 222 SIGIVP 227
>gi|289549019|ref|YP_003474007.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
gi|289182636|gb|ADC89880.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
Length = 437
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 8/100 (8%)
Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ ++ C +C +C R ++L A + V G
Sbjct: 148 AYVTVMKGCDKHCTYCVVPKTRGRQRSRSLESILEEVRWLVADGVKEIHLLGQNVTAWGQ 207
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
D + ++L + I V+ +RF + P +RI
Sbjct: 208 DI----NIHFSELLYRVAEIPGVERIRFTTGHPSDMDERI 243
>gi|189425324|ref|YP_001952501.1| radical SAM protein [Geobacter lovleyi SZ]
gi|189421583|gb|ACD95981.1| Radical SAM domain protein [Geobacter lovleyi SZ]
Length = 293
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150
++ ++ C CRFC G KG + E LA I E + V
Sbjct: 18 LIFQITVGCSQNQCRFC------GMYKGKQFHLRPVEEILAEITELPSTYRTRVERVFLA 71
Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182
GD L+ + L +L L + R S
Sbjct: 72 DGDALVYPFEGLVTILDALASTFPGLT--RIGS 102
>gi|238894848|ref|YP_002919582.1| pyrroloquinoline quinone biosynthesis protein PqqE [Klebsiella
pneumoniae NTUH-K2044]
gi|130802|sp|P27507|PQQE_KLEPN RecName: Full=Coenzyme PQQ synthesis protein E; AltName:
Full=Pyrroloquinoline quinone biosynthesis protein E
gi|809708|emb|CAA41583.1| pqqE [Klebsiella pneumoniae]
gi|238547164|dbj|BAH63515.1| pyrroloquinoline quinone synthesis protein E [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 380
Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP+ C +C + +++ L+++ + + ++ F+GG+PL
Sbjct: 14 LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71
Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L ++++ R + ++ + + EAG +I I
Sbjct: 72 RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118
Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261
E A+A A+++ A ++L+ VL + D + + L
Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177
>gi|265754282|ref|ZP_06089471.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
gi|263234991|gb|EEZ20546.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
Length = 472
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DPL + + + ++T+ IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165
>gi|262044465|ref|ZP_06017524.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038195|gb|EEW39407.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 380
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+L +L + CP+ C +C + +++ L+++ + + ++ F+GG+PL
Sbjct: 14 LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71
Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
L ++++ R + ++ + + EAG +I I
Sbjct: 72 RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118
Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261
E A+A A+++ A ++L+ VL + D + + L
Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177
>gi|212639043|ref|YP_002315563.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
gi|212560523|gb|ACJ33578.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
Length = 380
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 27/197 (13%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
P ++ ++ C + C C + + Y + +FTGG
Sbjct: 14 PFIVIWEVTRACQLKCVHCRADAQPFPDPRELTYEEGLRLIDDIYDMNNPML---VFTGG 70
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
D ++ L + + IK + P P + E ++ KE G +
Sbjct: 71 DCMMRED--LFDLAE--YAIKKGMRVSI---TPSATPN-VTKEKMKKAKEIGLSRWAFSL 122
Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
I P F I I L + L +V+ + D E +A L+
Sbjct: 123 DGPTADIHDRFRGTPSSFD-LTIENIRYLNELHMPLQINTVISRYNYDHLEQMAKLVAEL 181
Query: 262 VELRIKPYYLHHPDLAA 278
+ +Y+
Sbjct: 182 KAVM---WYIFLLVPTG 195
>gi|124514476|gb|EAY55989.1| conserved protein of unknown function [Leptospirillum rubarum]
Length = 462
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 198 QCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
+ L + P+YI++HA P E + + + I L GI L +Q V+ GIND
Sbjct: 136 RILDQRLSPLYISVHATDPAVRKRLLRNERAPDILDRIDHLIAGGIRLHTQIVITPGIND 195
>gi|331086912|ref|ZP_08335989.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410078|gb|EGG89513.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 484
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 96 RILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
+ L + C ++C+ C+ V K + K +A Y+ I +GG
Sbjct: 103 TVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWPYM--NPS-CSFIVSGG 158
Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
+ L+ + L+ + + ++ + I PEL L +
Sbjct: 159 EALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITPELADKLSKIR 202
>gi|264677776|ref|YP_003277682.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
CNB-2]
gi|262208288|gb|ACY32386.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
CNB-2]
Length = 342
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
+ + C C +C +E+ ++LS ++ + ++ TGG+
Sbjct: 6 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 64
Query: 154 PLILSHKRLQKVLKTLRYI 172
PL+ K ++ ++ L +
Sbjct: 65 PLL--RKNIEALIAQLAEL 81
>gi|209549618|ref|YP_002281535.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|226707377|sp|B5ZRM8|MOAA_RHILW RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|209535374|gb|ACI55309.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 348
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 38/178 (21%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 34 VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCSAFVA-KGVKKIRLTGGEPLV-- 90
Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHS--------------RVPIVDPQRINPELIQC 199
K + +++ L + V + S R V ++P+ +
Sbjct: 91 RKNIMYLVRRLGEKIGAGLDEVTLTTNGSQLSRHAEELYDCGVRRINVSLDTLDPDKFRK 150
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255
+ G + I AGI + +V LK ND PEI+
Sbjct: 151 ITRWGDFAKVM--------------EGIDAAQKAGIKIKLNAVALKDFNDAEMPEIMR 194
>gi|297583665|ref|YP_003699445.1| radical SAM domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142122|gb|ADH98879.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
Length = 368
Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
++C YCRFC ++ G VL +D IQE + E++ GG +
Sbjct: 61 TNLCDTYCRFCAFYRPPNAKDGYVLDDEDIYQK---IQETKDVGGTEILMQGG---TNPN 114
Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ LR IK + HS P
Sbjct: 115 LPFEYYTDLLRNIKKRFDITMHSFSPA 141
>gi|329731486|gb|EGG67849.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
21193]
Length = 383
Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P E + + ++ L I ++C + C C + +
Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62
Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111
>gi|206889368|ref|YP_002249102.1| heme biosynthesis (NirJ-2) family protein, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741306|gb|ACI20363.1| heme biosynthesis (NirJ-2) family protein, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 472
Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTP-VI---ANLINPHNPNDPIARQFIPQKEELNI 69
L + +L + ++ + +++P +L++ + + ++ ++I + EL
Sbjct: 7 LNDIHLFSIRDEHFLLDVEGNKIFSISPEAYEIALSLMSGNKSTNKLSLRYIRAERELRK 66
Query: 70 LPEEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRR-EMVGSQKGTV 125
+ + +P+ ++ P + + L L H C + C +CF
Sbjct: 67 I-FDSFEPLNSEEIEHRSKLLEEKPYKLNGLWLGLAHACNLGCSYCFANTPNYLQNHRPF 125
Query: 126 LSSKDTEAALAY-IQEKSQIW--EVIFTGGDPLILSHKRLQKVLK 167
+S + + A+ + I + I ++IF GG+PL L LQKV+
Sbjct: 126 MSEETAKRAIDFLINQSPDIEEYDIIFFGGEPL-LKFDLLQKVVD 169
>gi|295696361|ref|YP_003589599.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
gi|295411963|gb|ADG06455.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
Length = 359
Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
+VC YC FC G + VL E I+E ++ E++ GG
Sbjct: 66 SNVCDTYCTFCAFYRRPGHPEAYVLPD---EVIFEKIEETVRLGGTEILMQGG---THPD 119
Query: 160 KRLQKVLKTLRYIK 173
L+ + LR IK
Sbjct: 120 LPLEWYTELLRKIK 133
>gi|15920846|ref|NP_376515.1| hypothetical protein ST0626 [Sulfolobus tokodaii str. 7]
gi|15621630|dbj|BAB65624.1| 350aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 350
Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 33/151 (21%)
Query: 98 LLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
L+ C + C +C F +V D + I++ VIF GG+P
Sbjct: 4 LVLTTGKCNLTCDYCGGSFPSHIVPWGVKY-----DIQKLKNAIEKDQNAT-VIFYGGEP 57
Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIV--DPQRINPELIQCL---------- 200
L+ K + + + +++ R + V P+R ++ L
Sbjct: 58 LMNP-----KFIMQV--MDNIKAKRWGIQTNGVAVKLLPERYWKKMNVALLSIDGREEIT 110
Query: 201 -KEAGKPVY--IAIHANHPYEFSEEAIAAIS 228
K GK VY + HA + E E IA ++
Sbjct: 111 DKHRGKGVYKVVVKHAKYLKELGVETIARMA 141
>gi|328884350|emb|CCA57589.1| 2-oxoglutarate oxidoreductase, beta subunit [Streptomyces
venezuelae ATCC 10712]
Length = 353
Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 15/119 (12%)
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+L K L K + + ++H Q +RF + + + DP +L I IH
Sbjct: 226 VLKDKDLAK--EAVIRLEHGQPIRFGTENDKGVVRDPA--TGDLHVVTVTPENESRILIH 281
Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE--ILANLMRTFVELRIKPY 269
H + A+SRLA+ L Q+ + G+ E + LM +E ++ Y
Sbjct: 282 DAHAT--TPTTAFALSRLAD--PDTLHQTPI--GVFRSVERPVYDTLMADQLEAAVERY 334
>gi|258543190|ref|YP_003188623.1| pyrroloquinoline quinone biosynthesis protein PqqE [Acetobacter
pasteurianus IFO 3283-01]
gi|256634268|dbj|BAI00244.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-01]
gi|256637328|dbj|BAI03297.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-03]
gi|256640380|dbj|BAI06342.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-07]
gi|256643437|dbj|BAI09392.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-22]
gi|256646492|dbj|BAI12440.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-26]
gi|256649545|dbj|BAI15486.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-32]
gi|256652531|dbj|BAI18465.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655589|dbj|BAI21516.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
[Acetobacter pasteurianus IFO 3283-12]
Length = 364
Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 87/265 (32%), Gaps = 80/265 (30%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P +L +L H CP+ C +C + + L ++D + L+ + + +V F+GG+
Sbjct: 7 PMSLLAELTHRCPLQCPYCS-NPLQLEPRTQELGTEDWKRVLSE-AAEMGVLQVHFSGGE 64
Query: 154 PL--------------------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
P+ +L+ K LQ++ + H+Q+
Sbjct: 65 PMARPDLPELVAHAAKAGLYSNLITSGVLLNAKNLQELADA--GLDHIQL---------- 112
Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
E+ + A H + A + G+ L V+ +
Sbjct: 113 -------SFQDAEAESADHIAHMTGA-HAKKL-----EAAQLIKTEGLPLTLNFVIHRQN 159
Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------------RLTIEEGQKIV 294
+ + L R++ A T ++ R +EE +K+V
Sbjct: 160 CERVPAMLALAEQLGARRVE---------IAHTQYYGWGLLNRNALLPSRTQVEETEKVV 210
Query: 295 ASLKEKISG-----LCQPFYILDLP 314
A + ++SG P Y D P
Sbjct: 211 AEARVRLSGRMSIDFVTPDYYADRP 235
>gi|297208902|ref|ZP_06925307.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300913040|ref|ZP_07130478.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|296886463|gb|EFH25391.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300885818|gb|EFK81025.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus TCH70]
Length = 394
Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P E + + ++ L I ++C + C C + +
Sbjct: 27 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 73
Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 74 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 122
>gi|78355756|ref|YP_387205.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218161|gb|ABB37510.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 353
Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 43/254 (16%)
Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L + C + C +C+ + + ++L ++ + + +V TGG+P +
Sbjct: 37 LSVTDRCNLRCMYCWTCDGLSFIPHDSILKYEEMLQLVDA-AVGMGVEKVRLTGGEPFVR 95
Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH-- 215
++++L +R + + + L++ G Y+ I +
Sbjct: 96 KDFLF--LVESLVRRHPSLDVRITTNA------TLLAGKVAALRDLGVR-YVNISLDTFE 146
Query: 216 --------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELR 265
+ A+ + GI L +V L+G NDD P L R V++R
Sbjct: 147 RERFRRVAGRDMLRHVRRALDEVLEHGIGLKLNAVALRGFNDDELPVFLNFARRNAVDVR 206
Query: 266 IKPYYLHHP-DLAAGTSHF-RLTIEEGQKIVASLKEK-----ISGLCQ---PFYILDLPG 315
G + + + I+ + + + G + P + + G
Sbjct: 207 ------FIEFMPMGGCTRWSQENFWPASDILETARRHADLTPVEGRSRRSGPARLYSIEG 260
Query: 316 GYGK----VKIDTH 325
G G+ + H
Sbjct: 261 GKGRFGLITPLSDH 274
>gi|152986331|ref|YP_001349180.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa
PA7]
gi|150961489|gb|ABR83514.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa
PA7]
Length = 331
Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L + C C +C +M + VLS ++ A + + TGG+PL+
Sbjct: 19 LSVTDRCDFRCTYCMSEDMQFLPRDQVLSLEELYAVADAFIG-LGVRRIRITGGEPLV-- 75
Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
K + +L L ++ L +
Sbjct: 76 RKGIAGLLARLGQRPELEDLAITT 99
>gi|310641170|ref|YP_003945928.1| radical sam domain protein [Paenibacillus polymyxa SC2]
gi|309246120|gb|ADO55687.1| Radical SAM domain protein [Paenibacillus polymyxa SC2]
Length = 376
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 18/122 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + H+C + C C +M+ ++ L + L + E + + TGG+P +
Sbjct: 36 VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212
L K + V+ L + +R +IN L ++ K + + I
Sbjct: 93 L-DKTVDDVIVPLLKYAKERGIR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141
Query: 213 AN 214
N
Sbjct: 142 FN 143
>gi|304410843|ref|ZP_07392460.1| Radical SAM domain protein [Shewanella baltica OS183]
gi|307304986|ref|ZP_07584736.1| Radical SAM domain protein [Shewanella baltica BA175]
gi|304350740|gb|EFM15141.1| Radical SAM domain protein [Shewanella baltica OS183]
gi|306912388|gb|EFN42812.1| Radical SAM domain protein [Shewanella baltica BA175]
Length = 295
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
++L++ + C C FC K + LA + + + V GD +
Sbjct: 19 LILQVTNGCSWNQCSFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78
Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178
L RL+ + + + R++ V +
Sbjct: 79 SLPFARLEAICELINRHLPQVTRI 102
>gi|261417330|ref|YP_003251013.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373786|gb|ACX76531.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325710|gb|ADL24911.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 224
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ LH C + C +C V +S + AA+ + +S + V TGG+PLI
Sbjct: 21 AVFVRLHGCNLRCSYCDSMYAVEGPDFKQMSVGEVLAAVEMYRNESGVKCVTLTGGEPLI 80
>gi|169835697|ref|ZP_02868885.1| putative anaerobic ribonucleoside-triphosphate reductase activating
protein [candidate division TM7 single-cell isolate
TM7a]
Length = 157
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C C G L+ + E I E + + + +GGDPL L+
Sbjct: 25 GCSHACPGCHNEYSWNPNHGNTLTYEILEKIAKEINENTLLDGITISGGDPLFNPIDMLK 84
>gi|149917134|ref|ZP_01905634.1| Radical SAM [Plesiocystis pacifica SIR-1]
gi|149822050|gb|EDM81443.1| Radical SAM [Plesiocystis pacifica SIR-1]
Length = 381
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
P+R++L + C + C C E + +V D +++ ++ + TGG+
Sbjct: 39 PNRLVLDVTRRCNLRCSMCRTWEDPRRDELSVPEIADI------MRQLPRLTWLDVTGGE 92
Query: 154 PLILSHKR 161
P + +
Sbjct: 93 PFLRKDAK 100
>gi|197117748|ref|YP_002138175.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
gi|197087108|gb|ACH38379.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
[Geobacter bemidjiensis Bem]
Length = 445
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
YP ++ ++ C + C C ++ GS + LS + +A + + ++ G
Sbjct: 22 YPSKLFVEATSRCNLNCVMCMKQNSGGSVRDGDLSPEIFQALEPALAN---LDALVLNGV 78
Query: 152 GDPLILSHKRLQKVLKTL-RYIKH 174
G+PLI + RL++ + + +
Sbjct: 79 GEPLI--NTRLEQYISHAKSRMPN 100
>gi|21283546|ref|NP_646634.1| hypothetical protein MW1817 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486695|ref|YP_043916.1| hypothetical protein SAS1799 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|21204987|dbj|BAB95682.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49245138|emb|CAG43604.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
Length = 383
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P E + + ++ L I ++C + C C + +
Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62
Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111
>gi|15924867|ref|NP_372401.1| hypothetical protein SAV1877 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927451|ref|NP_374984.1| hypothetical protein SA1693 [Staphylococcus aureus subsp. aureus
N315]
gi|148268349|ref|YP_001247292.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150394411|ref|YP_001317086.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156980193|ref|YP_001442452.1| hypothetical protein SAHV_1862 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253314938|ref|ZP_04838151.1| hypothetical protein SauraC_01935 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006665|ref|ZP_05145266.2| hypothetical protein SauraM_09355 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258408911|ref|ZP_05681193.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258430043|ref|ZP_05688413.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443439|ref|ZP_05691781.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445297|ref|ZP_05693488.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258447861|ref|ZP_05695995.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258453294|ref|ZP_05701279.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269203514|ref|YP_003282783.1| hypothetical protein SAAV_1927 [Staphylococcus aureus subsp. aureus
ED98]
gi|282894542|ref|ZP_06302770.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117]
gi|282928049|ref|ZP_06335656.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295407255|ref|ZP_06817054.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819]
gi|296275890|ref|ZP_06858397.1| hypothetical protein SauraMR_06062 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246218|ref|ZP_06930069.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796]
gi|13701670|dbj|BAB42963.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247649|dbj|BAB58039.1| similar to thioredoxin-like oxidoreductases [Staphylococcus aureus
subsp. aureus Mu50]
gi|147741418|gb|ABQ49716.1| YfkB-like domain [Staphylococcus aureus subsp. aureus JH9]
gi|149946863|gb|ABR52799.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|156722328|dbj|BAF78745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257840358|gb|EEV64820.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257849637|gb|EEV73605.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851324|gb|EEV75264.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855815|gb|EEV78739.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257858793|gb|EEV81662.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257864502|gb|EEV87245.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262075804|gb|ACY11777.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282590113|gb|EFB95194.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282763029|gb|EFC03161.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117]
gi|285817557|gb|ADC38044.1| Hypothetical protein SA2981_1833 [Staphylococcus aureus 04-02981]
gi|294967830|gb|EFG43860.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819]
gi|297176925|gb|EFH36182.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796]
gi|312830249|emb|CBX35091.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129317|gb|EFT85311.1| hypothetical protein CGSSa03_08645 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329724779|gb|EGG61283.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
21172]
Length = 383
Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
P E + + ++ L I ++C + C C + +
Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62
Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111
>gi|282600001|ref|ZP_05972682.2| putative pyruvate formate-lyase activating enzyme [Providencia
rustigianii DSM 4541]
gi|282566719|gb|EFB72254.1| putative pyruvate formate-lyase activating enzyme [Providencia
rustigianii DSM 4541]
Length = 317
Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 11/61 (18%)
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273
RL G ++ + L++G ND + + L + + I PY H
Sbjct: 215 VRRNFERLMELGANVVMRMPLVRGCNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272
Query: 274 P 274
Sbjct: 273 L 273
>gi|212690607|ref|ZP_03298735.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
gi|212666853|gb|EEB27425.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
Length = 472
Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DPL + + + ++T+ IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165
>gi|73662225|ref|YP_301006.1| hypothetical protein SSP0916 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494740|dbj|BAE18061.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 379
Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 12/112 (10%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + +++ L I ++C + C C + + L
Sbjct: 15 IHNDPWEAYNDMQEHDRLTLSNIE--------FTTTNLCNMRCSHCAVGYTLQTTDPDPL 66
Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
L I + + TGG+P + S K ++ V+K L H + +
Sbjct: 67 PMDLIYRRLDEI---PDLKTMSITGGEP-MFSKKSIRNVVKPLLKYAHSRGI 114
>gi|49484118|ref|YP_041342.1| hypothetical protein SAR1967 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257426009|ref|ZP_05602431.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428682|ref|ZP_05605077.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431292|ref|ZP_05607668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257434010|ref|ZP_05610361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436914|ref|ZP_05612956.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282906280|ref|ZP_06314132.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282909196|ref|ZP_06317012.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282911502|ref|ZP_06319302.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282914674|ref|ZP_06322459.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus M899]
gi|282925115|ref|ZP_06332775.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp.
aureus C101]
gi|283958638|ref|ZP_06376084.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293507751|ref|ZP_06667593.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293510769|ref|ZP_06669471.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|293539308|ref|ZP_06671987.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus M1015]
gi|295428458|ref|ZP_06821085.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|49242247|emb|CAG40954.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271152|gb|EEV03309.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274326|gb|EEV05838.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257277941|gb|EEV08597.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257280936|gb|EEV11080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283703|gb|EEV13828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313073|gb|EFB43471.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp.
aureus C101]
gi|282321388|gb|EFB51714.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus M899]
gi|282324511|gb|EFB54823.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282326764|gb|EFB57061.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282330477|gb|EFB59994.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus Btn1260]
gi|283789678|gb|EFC28500.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290919843|gb|EFD96912.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus M1015]
gi|291094814|gb|EFE25082.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291466400|gb|EFF08924.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|295127440|gb|EFG57079.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 383
Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111
>gi|237725196|ref|ZP_04555677.1| thiamine biosynthesis protein ThiH [Bacteroides sp. D4]
gi|229436462|gb|EEO46539.1| thiamine biosynthesis protein ThiH [Bacteroides dorei 5_1_36/D4]
Length = 472
Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DPL + + + ++T+ IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165
>gi|312437658|gb|ADQ76729.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus TCH60]
Length = 394
Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 23 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 69
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 70 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 122
>gi|150002946|ref|YP_001297690.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
gi|254884684|ref|ZP_05257394.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
gi|294776606|ref|ZP_06742075.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
gi|319642353|ref|ZP_07997008.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
gi|149931370|gb|ABR38068.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
gi|254837477|gb|EET17786.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
gi|294449521|gb|EFG18052.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
gi|317386013|gb|EFV66937.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
Length = 472
Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ G DPL + + + ++T+ IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIQTIYSIKH 165
>gi|21674976|ref|NP_663041.1| translation initiation factor IF-1 [Chlorobium tepidum TLS]
gi|193211873|ref|YP_001997826.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327]
gi|25008603|sp|Q8KAJ3|IF1_CHLTE RecName: Full=Translation initiation factor IF-1
gi|21648209|gb|AAM73383.1| translation initiation factor IF-1 [Chlorobium tepidum TLS]
gi|193085350|gb|ACF10626.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327]
Length = 72
Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
+ FR+ +E G + + +SG + YI LPG KV+I +++ K
Sbjct: 18 PNAQFRVKLENGLE----VLAHVSGKIRMHYIRILPGDKVKVQISPYDLSK 64
>gi|308369956|ref|ZP_07419659.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu002]
gi|308325958|gb|EFP14809.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu002]
Length = 351
Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 23 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 81
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 82 PD--LPEIVRTLSA 93
>gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HdN1]
gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
HdN1]
Length = 332
Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 33/207 (15%)
Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R + L + C C +C +M + VLS ++ + A + ++ TG
Sbjct: 13 RKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQTIAAVFVG-LGVTKIRLTG 71
Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIA 210
G+PL+ +++ L ++ ++ + + ++ +L + LKEAG + I+
Sbjct: 72 GEPLVRKDCV--SLVRGLSELEGLKEITLTTNG-----NQL-AQLAKPLKEAGLGRINIS 123
Query: 211 IHANHPYEFSEEAIAAISR---LAN--AGI----------ILLSQSVLLKGINDDPEILA 255
+ + E AI+R L+ AGI L+ +V++KG NDD +
Sbjct: 124 L-----DSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLN-AVIMKGRNDD--EII 175
Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSH 282
L V + Y+ L G +H
Sbjct: 176 ALAEYAVSKGVDITYIEEMPLGEGINH 202
>gi|332827435|gb|EGK00187.1| hypothetical protein HMPREF9455_03519 [Dysgonomonas gadei ATCC
BAA-286]
Length = 342
Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+L C + CR+C+ ++ G+Q + S L + + I + TGG+P +
Sbjct: 14 FELTDKCNLACRYCYNIWKIPGAQHQSFNSYNKAIKTLKQVFSQVDIRNITLTGGEPFVA 73
Query: 158 SHKRLQKV 165
+R++++
Sbjct: 74 --QRIKEI 79
>gi|170732703|ref|YP_001764650.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3]
gi|169815945|gb|ACA90528.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3]
Length = 589
Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG----SYCITDH 340
Q+++ + ++ G P I+D+ G+G+ +D + +G + D+
Sbjct: 390 QELIGAAIGRLRGHGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDY 443
>gi|329847364|ref|ZP_08262392.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
C19]
gi|328842427|gb|EGF91996.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
C19]
Length = 448
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 18/118 (15%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWE 146
L + C +C FC R +L AA L + + +
Sbjct: 152 TAFLTVQEGCDKFCTFCVVPYTRGAEWSRPVAAILDEAQALAAKGVRELTLLGQN--VNA 209
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D L K++ L I + LR+ + P + +LI ++ G
Sbjct: 210 FNGVGSDG---QPSTLAKLMYALADIPGIDRLRYTTSHPND----MGDDLIAAHRDLG 260
>gi|260891523|ref|ZP_05902786.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia hofstadii F0254]
gi|260858906|gb|EEX73406.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Leptotrichia hofstadii F0254]
Length = 126
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 23/60 (38%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
C C C + G +L+ + E I E + + + +GGDPL L+
Sbjct: 43 GCSHSCPGCHNEYSWNPKHGNLLTYEKLEEIAKEINENTLLDGITISGGDPLFNPVDMLK 102
>gi|162148088|ref|YP_001602549.1| hypothetical protein GDI_2305 [Gluconacetobacter diazotrophicus PAl
5]
gi|209542702|ref|YP_002274931.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786665|emb|CAP56248.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530379|gb|ACI50316.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
PAl 5]
Length = 420
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R +++ C C FC +V E A + E++ TG D
Sbjct: 130 RTRAFVEVQQGCDHRCTFCII-PFGRGPSRSVPVGAVVEQVRALVAS--GYREIVLTGVD 186
Query: 154 PLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
I S L ++ + L + ++ LR S VDP I+ +L + L + G+
Sbjct: 187 --ITSWGGDLPGRPALGQLCRRVLALVPELERLRLSS----VDPVEIDDDLWRLLAQEGR 240
>gi|57117055|ref|YP_177925.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis H37Rv]
gi|121638994|ref|YP_979218.1| putative molybdenum cofactor biosynthesis protein A moaA1
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662963|ref|YP_001284486.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis H37Ra]
gi|148824301|ref|YP_001289055.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis F11]
gi|224991486|ref|YP_002646175.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253797790|ref|YP_003030791.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 1435]
gi|254365737|ref|ZP_04981782.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis str. Haarlem]
gi|260202251|ref|ZP_05769742.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|260206444|ref|ZP_05773935.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis K85]
gi|289444673|ref|ZP_06434417.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|289553099|ref|ZP_06442309.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 605]
gi|289571317|ref|ZP_06451544.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T17]
gi|289575821|ref|ZP_06456048.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis K85]
gi|289746919|ref|ZP_06506297.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis 02_1987]
gi|289751785|ref|ZP_06511163.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T92]
gi|289755228|ref|ZP_06514606.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis EAS054]
gi|289759236|ref|ZP_06518614.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T85]
gi|289763289|ref|ZP_06522667.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis GM 1503]
gi|297635744|ref|ZP_06953524.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN 4207]
gi|297732742|ref|ZP_06961860.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN R506]
gi|306804898|ref|ZP_07441566.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu008]
gi|306809089|ref|ZP_07445757.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu007]
gi|313660075|ref|ZP_07816955.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis KZN V2475]
gi|3024133|sp|O05786|MOAA1_MYCTU RecName: Full=Molybdenum cofactor biosynthesis protein A 1
gi|38490320|emb|CAE55548.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
[Mycobacterium tuberculosis H37Rv]
gi|121494642|emb|CAL73123.1| Probable molybdenum cofactor biosynthesis protein A moaA1
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|134151250|gb|EBA43295.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis str. Haarlem]
gi|148507115|gb|ABQ74924.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis H37Ra]
gi|148722828|gb|ABR07453.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis F11]
gi|224774601|dbj|BAH27407.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253319293|gb|ACT23896.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 1435]
gi|289417592|gb|EFD14832.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
tuberculosis T46]
gi|289437731|gb|EFD20224.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 605]
gi|289540252|gb|EFD44830.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis K85]
gi|289545071|gb|EFD48719.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T17]
gi|289687447|gb|EFD54935.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis 02_1987]
gi|289692372|gb|EFD59801.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T92]
gi|289695815|gb|EFD63244.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
tuberculosis EAS054]
gi|289710795|gb|EFD74811.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis GM 1503]
gi|289714800|gb|EFD78812.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis T85]
gi|308344666|gb|EFP33517.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu007]
gi|308348616|gb|EFP37467.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis SUMu008]
gi|323718340|gb|EGB27518.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CDC1551A]
gi|326902668|gb|EGE49601.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis W-148]
gi|328457569|gb|AEB02992.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis KZN 4207]
Length = 359
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 90 PD--LPEIVRTLSA 101
>gi|319892917|ref|YP_004149792.1| hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius
HKU10-03]
gi|317162613|gb|ADV06156.1| Hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius
HKU10-03]
Length = 379
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C + ++ +L L I + + TGG+P +
Sbjct: 33 VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRY 171
S K +++V+K L
Sbjct: 89 FSKKSIREVVKPLLK 103
>gi|260188145|ref|ZP_05765619.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CPHL_A]
gi|289448788|ref|ZP_06438532.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CPHL_A]
gi|289421746|gb|EFD18947.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis CPHL_A]
Length = 359
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 90 PD--LPEIVRTLSA 101
>gi|31794288|ref|NP_856781.1| molybdenum cofactor biosynthesis protein A [Mycobacterium bovis
AF2122/97]
gi|59798458|sp|Q7TX84|MOAA1_MYCBO RecName: Full=Molybdenum cofactor biosynthesis protein A 1
gi|31619883|emb|CAD96823.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
[Mycobacterium bovis AF2122/97]
Length = 359
Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 90 PD--LPEIVRTLSA 101
>gi|222053130|ref|YP_002535492.1| radical SAM protein [Geobacter sp. FRC-32]
gi|221562419|gb|ACM18391.1| Radical SAM domain protein [Geobacter sp. FRC-32]
Length = 359
Score = 36.2 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 42/221 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
P I + C + C C ++ S+ ++ + + L I + S+ V+ +GG
Sbjct: 7 PKWIAWETTQKCNLKCVHCRCSSDLTSSEGD--FTTDEGKKLLKEIADFSKP-VVVLSGG 63
Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208
+PL+ L +L R+ + + E+ Q +KEA +
Sbjct: 64 EPLMRQDIFELAGYGTSL-----------GLRMCMATNGALVTDEVCQKMKEADIKMVSL 112
Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
A+H N P F AA G L S K + +AN +
Sbjct: 113 SLDGSTAAVHDNFRQCPGAFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQNDIANTFK 168
Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
L +Y+ + G++I+ L K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMNELISK 199
>gi|134301127|ref|YP_001114623.1| radical SAM domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134053827|gb|ABO51798.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
Length = 450
Score = 36.2 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
DP + G+V + L L H C + C++CF E +LS++
Sbjct: 73 FTTDPHQEGYRPKRDGVV-----KALCLHAAHDCNLRCKYCFAGEGKFGGPSGLLSAETG 127
Query: 132 EAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVL 166
AA+ ++ + S E+ F GG+PL L+ K +++++
Sbjct: 128 RAAIDFLIQHSGNRKHVEIDFFGGEPL-LNFKVIKELV 164
>gi|255261246|ref|ZP_05340588.1| phosphate butyryltransferase [Thalassiobium sp. R2A62]
gi|255103581|gb|EET46255.1| phosphate butyryltransferase [Thalassiobium sp. R2A62]
Length = 76
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 14/67 (20%)
Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--ANHPYEFSEEAIAAISR 229
I ++ + S + +L + LK+ + + + H ANHP +++ + +
Sbjct: 3 IPTLKRICIAS----------DADLTRTLKKLDQKIMLVTHGDANHPKHINKDTVK--TA 50
Query: 230 LANAGII 236
LA G
Sbjct: 51 LAAHGWT 57
>gi|224024935|ref|ZP_03643301.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
18228]
gi|224018171|gb|EEF76169.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
18228]
Length = 432
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 97 ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147
LK+ C C +C V +L I + E+
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPMEEILDEVRLLVSQGVKEFQVIAQ-----EL 192
Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ G D + + L ++++ + I V+ +R H P P+ +L + ++E
Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAEIPGVEWIRLHYAYPAAFPE----DLFRVMREH 242
>gi|149069513|gb|EDM18954.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 636
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + L C + CR+C E V + K +L++++ LA + K + +
Sbjct: 66 GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ TGG+PLI ++ L ++ ++ +
Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151
>gi|313902209|ref|ZP_07835617.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
subterraneus DSM 13965]
gi|313467544|gb|EFR63050.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
subterraneus DSM 13965]
Length = 482
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GG 152
L + C C +C + +G E L + + + + GG
Sbjct: 103 ALYIHVPYCRQRCYYCDFNTYLLDPEGKRRYLAALERELDLLAADPGLTRPLVSVFVGGG 162
Query: 153 DPLILSHKRLQKVLKTLRY 171
P +L L+++L+ +
Sbjct: 163 TPSLLEPAELERLLEAVHR 181
>gi|260424643|ref|ZP_05778954.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470]
gi|260402668|gb|EEW96215.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470]
Length = 433
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 36/182 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIF 149
P +K+ C C FC+ + G+ + + S + + + ++E + I + F
Sbjct: 127 PYSAYIKIAEGCSNGCTFCYIPYVRGAMRSRSIPSVVHEVKRLSSEGVREFNLIAQDSSF 186
Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
G D L+ L ++LK L I +V+ +R + P + EL++ + + K
Sbjct: 187 YGRD---LNDGTTLARLLKELVKIDNVKWIRL----FYLYPTYFDDELLEIITKEEKICK 239
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
Y+ I H S+ + + R D + + L++
Sbjct: 240 YVDIPLQH---ISDSVLRRMHRR------------------DSSQSIKKLLKKLRNT--T 276
Query: 268 PY 269
PY
Sbjct: 277 PY 278
>gi|227500638|ref|ZP_03930687.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
35098]
gi|227217225|gb|EEI82569.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
35098]
Length = 472
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
E +L +E+ + + + + + H+ Y +RI+L + C C +C
Sbjct: 51 SHREAFVLLSCKEEDLNEEIFNLARELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
+ L+ + + +Q+ + G DP+ + + + + T+ IKH
Sbjct: 111 NKTIPRRKLTQDEIREQVIALQDLGHKRLALEAGEDPIHNPLEYILESIHTIYNIKH 167
>gi|53719965|ref|YP_108951.1| putative pyruvate radical-activating enzyme [Burkholderia
pseudomallei K96243]
gi|53725684|ref|YP_102410.1| radical SAM domain-containing protein [Burkholderia mallei ATCC
23344]
gi|76811377|ref|YP_334194.1| radical SAM domain-containing protein [Burkholderia pseudomallei
1710b]
gi|121598521|ref|YP_993691.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei SAVP1]
gi|124384170|ref|YP_001028848.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei NCTC 10229]
gi|126440040|ref|YP_001059711.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 668]
gi|126450188|ref|YP_001081241.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei NCTC 10247]
gi|167001134|ref|ZP_02266935.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei PRL-20]
gi|167720455|ref|ZP_02403691.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei DM98]
gi|167739449|ref|ZP_02412223.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 14]
gi|167825055|ref|ZP_02456526.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 9]
gi|167895144|ref|ZP_02482546.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 7894]
gi|167903530|ref|ZP_02490735.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei NCTC 13177]
gi|167911777|ref|ZP_02498868.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 112]
gi|167919782|ref|ZP_02506873.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei BCC215]
gi|238562381|ref|ZP_00440588.2| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei GB8 horse 4]
gi|254184291|ref|ZP_04890881.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1655]
gi|254261769|ref|ZP_04952823.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1710a]
gi|52210379|emb|CAH36360.1| putative pyruvate radical-activating enzyme [Burkholderia
pseudomallei K96243]
gi|52429107|gb|AAU49700.1| radical SAM domain protein [Burkholderia mallei ATCC 23344]
gi|76580830|gb|ABA50305.1| radical SAM domain protein [Burkholderia pseudomallei 1710b]
gi|121227331|gb|ABM49849.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei SAVP1]
gi|124292190|gb|ABN01459.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei NCTC 10229]
gi|126219533|gb|ABN83039.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 668]
gi|126243058|gb|ABO06151.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei NCTC 10247]
gi|184214822|gb|EDU11865.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1655]
gi|238522812|gb|EEP86254.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei GB8 horse 4]
gi|243063082|gb|EES45268.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia mallei PRL-20]
gi|254220458|gb|EET09842.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1710a]
Length = 239
Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 24 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+P I L I V+ L
Sbjct: 81 GGEPSI--DPALA------ASIDDVRRL 100
>gi|328552419|gb|AEB22911.1| YfkA [Bacillus amyloliquefaciens TA208]
gi|328910769|gb|AEB62365.1| hypothetical protein LL3_00820 [Bacillus amyloliquefaciens LL3]
Length = 373
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ +C + C C + + L L I + + TGG+P +
Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLLLKRLEEI---PLLRSISITGGEP-M 89
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
LS K +++ + L H + +R +IN L + + P +H +
Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139
Query: 215 H 215
H
Sbjct: 140 H 140
>gi|298526582|ref|ZP_07013991.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis 94_M4241A]
gi|298496376|gb|EFI31670.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis 94_M4241A]
Length = 359
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 90 PD--LPEIVRTLSA 101
>gi|289549352|ref|YP_003474340.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484]
gi|289182969|gb|ADC90213.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484]
Length = 407
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 38/179 (21%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
R +K+ C +C FC G + +V K E ++ + EV+ TG
Sbjct: 138 RSRPFVKIQEGCNKFCSFCVIPYARGKVR-SVPPQKVLEEI--HLLAQKGFEEVVITGTQ 194
Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
D L K+LK + I+ ++++R S + P + EL+ + E K
Sbjct: 195 LSQYGWDMGT----TLGKLLKEMVKIEGIKLIRLSS----LHPAELEEELLTIITEEEK- 245
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
IA H + P + S I +L G P+ L+ VE R
Sbjct: 246 --IAPHFHLPLQ-SGSLR--ILQLMERGYT--------------PDEYRRLVEKLVEKR 285
>gi|256061056|ref|ZP_05451212.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
gi|261325058|ref|ZP_05964255.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
gi|261301038|gb|EEY04535.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
Length = 344
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
K + ++ L + + + S++ R EL C + + +++
Sbjct: 86 RKNIMHLVGNLSRHLKSGALDELALTTNGSQL-----ARFAGELADC---GVRRINVSLD 137
Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
+P +F I AGI + +V LK ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182
>gi|237669370|ref|ZP_04529352.1| ThiH/BioB family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 468
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C + L+ ++ + + +Q+ +
Sbjct: 76 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 135
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
TG DP+ + + + +KT+ IKH
Sbjct: 136 ETGEDPVNNPIEYVLESIKTIYGIKH 161
>gi|182419049|ref|ZP_02950303.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
gi|182377004|gb|EDT74574.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
gi|256258836|gb|EEP52815.2| putative thiazole biosynthesis protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 472
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C + L+ ++ + + +Q+ +
Sbjct: 80 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
TG DP+ + + + +KT+ IKH
Sbjct: 140 ETGEDPVNNPIEYVLESIKTIYGIKH 165
>gi|15965617|ref|NP_385970.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
1021]
gi|307302736|ref|ZP_07582492.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
BL225C]
gi|307318584|ref|ZP_07598018.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
AK83]
gi|24211996|sp|Q92PB4|MOAA_RHIME RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|15074798|emb|CAC46443.1| Probable molybdenum cofactor biosynthesis protein [Sinorhizobium
meliloti 1021]
gi|306895924|gb|EFN26676.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
AK83]
gi|306903100|gb|EFN33691.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
BL225C]
Length = 349
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 34 VSVTDRCDFRCTYCMAEHMAFLPKKDLLTLEELQRLCSAFIA-KGVRKLRLTGGEPLVRK 92
Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
+ ++++ K + + + + S++ + EL+ C V +
Sbjct: 93 NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146
Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
E + + I AG+ + +V LK ND + LMR
Sbjct: 147 DKFRQITRWGELAR-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195
>gi|325122551|gb|ADY82074.1| molybdopterin biosynthesis, protein A [Acinetobacter calcoaceticus
PHEA-2]
Length = 346
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + +++ ++ I + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + + LK+AG + I++ + P
Sbjct: 86 RQGIVYFVRDLQALKVLGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLDSLDPV 141
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I +AG+ VL+K NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKNKNDD 181
>gi|323464035|gb|ADX76188.1| radical SAM domain protein [Staphylococcus pseudintermedius ED99]
Length = 379
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ ++C + C C + ++ +L L I + + TGG+P +
Sbjct: 33 VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88
Query: 157 LSHKRLQKVLKTLRY 171
S K +++V+K L
Sbjct: 89 FSKKSIREVVKPLLK 103
>gi|291566663|dbj|BAI88935.1| tRNA-i(6)A37 modification enzyme MiaB [Arthrospira platensis
NIES-39]
Length = 452
Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
+ +++ C C +C + G+++ + A + + ++ +
Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205
Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
G D P R L +L + I ++ +RF + P LI+ E
Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261
Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
K + H + P + + A++R
Sbjct: 262 K---VCEHFHIPFQSGDNDVLRAMAR 284
>gi|305663275|ref|YP_003859563.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
gi|304377844|gb|ADM27683.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
Length = 295
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 23/183 (12%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
L C +C +C+ +G + + ++ E L I + + + + + DP
Sbjct: 23 LHPYTGCSHFCLYCYATSYIGRKPSVPKKNFIENLEKDLRQIVKGAVVE--LSSSSDPYP 80
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
+L+ KTL + R R+ I I I L P + I
Sbjct: 81 PIEMQLELTRKTLEVLG-----RNGFRILITTKSDIVARDIDILLRY--PSAVMITITTL 133
Query: 217 YE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVEL 264
+ A + A+ +L+ AGI + + ++ INDDPE L L+ ++
Sbjct: 134 DQGVAKVLEPGAPPPDRRMEAVRKLSRAGIPVGIRIDPVIPMINDDPEKLRELVNIARDV 193
Query: 265 RIK 267
Sbjct: 194 GAL 196
>gi|258422954|ref|ZP_05685853.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257846741|gb|EEV70756.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 383
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111
>gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 367
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 17/114 (14%)
Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
+ C V C FC + +G+ KG VLS +D + Y + ++ GG +
Sbjct: 72 TNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDY-AMEEGADQMFLQGG---VYPELP 127
Query: 162 LQKVLKTLRYIK------HVQILR----FHSRVPIVDPQRINPELIQCLKEAGK 205
L +R +K H++ + P R E+++ LKEAG
Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLR---EVLEILKEAGL 178
>gi|146329545|ref|YP_001210081.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A]
gi|190359636|sp|A5EXE7|IF1_DICNV RecName: Full=Translation initiation factor IF-1
gi|146233015|gb|ABQ13993.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A]
Length = 72
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ +E G +I ISG + YI L G KV++ +++ K G
Sbjct: 22 FRVELENGHQI----NAHISGRMRKHYIRILTGDKVKVEMTPYDLSK---GRIVFR 70
>gi|126451746|ref|YP_001066995.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 1106a]
gi|167816652|ref|ZP_02448332.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei 91]
gi|167846563|ref|ZP_02472071.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Burkholderia pseudomallei B7210]
gi|242317715|ref|ZP_04816731.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1106b]
gi|126225388|gb|ABN88928.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1106a]
gi|242140954|gb|EES27356.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
pseudomallei 1106b]
Length = 239
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
YP + + + CP C +C Q + + + +A LA++ + I V+F+
Sbjct: 24 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG+P I L I V+ L
Sbjct: 81 GGEPSI--DPALA------ASIDDVRRL 100
>gi|308802520|ref|XP_003078573.1| putative cullin (ISS) [Ostreococcus tauri]
gi|116057026|emb|CAL51453.1| putative cullin (ISS) [Ostreococcus tauri]
Length = 747
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRI 266
E A+ LA A + +L++ + INDD E+ L +++
Sbjct: 611 ELKRALQSLACAKVRILNKEPKSREINDDDSFEVNTALNERLFRIKV 657
>gi|15842680|ref|NP_337717.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CDC1551]
gi|254233733|ref|ZP_04927058.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis C]
gi|13882999|gb|AAK47531.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
tuberculosis CDC1551]
gi|124599262|gb|EAY58366.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
tuberculosis C]
Length = 368
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
L ++ C + CR+C + +LS K+ A + + +V TGG+PLI
Sbjct: 40 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 98
Query: 158 SHKRLQKVLKTLRY 171
L ++++TL
Sbjct: 99 PD--LPEIVRTLSA 110
>gi|258543608|ref|YP_003189041.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-01]
gi|256634686|dbj|BAI00662.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-01]
gi|256637742|dbj|BAI03711.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-03]
gi|256640796|dbj|BAI06758.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-07]
gi|256643851|dbj|BAI09806.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-22]
gi|256646906|dbj|BAI12854.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-26]
gi|256649959|dbj|BAI15900.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-32]
gi|256652949|dbj|BAI18883.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656003|dbj|BAI21930.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
3283-12]
Length = 461
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152
L + C CRFC V + L+ ++ +A + E+ + V F GG
Sbjct: 53 LYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRIVALVGEQRTVRHVQFGGG 112
Query: 153 DPLILSHKRLQKVLKTLR 170
P L L+++++++R
Sbjct: 113 TPTTLPPHSLRQIMRSIR 130
>gi|224371859|ref|YP_002606025.1| putative oxygen-independent coproporphyrinogen III oxidase
[Desulfobacterium autotrophicum HRM2]
gi|223694578|gb|ACN17861.1| putative oxygen-independent coproporphyrinogen III oxidase
[Desulfobacterium autotrophicum HRM2]
Length = 289
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 95 DRILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
+ ILL++ C C FC ++ E +K V+ +D E A + + + +
Sbjct: 15 NSILLQVTVGCSHNKCTFCGAYKGERFKIKKDPVI-MEDIEFAARHCRRQ---NRLFICD 70
Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQILRFH----SRVPIVDPQRI-NPELIQCLKEAGK 205
GD LI+ +RL +L+ + + + ++ R ++ R+ + + ++ L+ G
Sbjct: 71 GDALIIPQRRLVPILEQINQRLPWIE--RIGLYANTKSI-----RMKSDQELEQLRSLGV 123
Query: 206 PVYIA 210
+
Sbjct: 124 KIAYM 128
>gi|170750295|ref|YP_001756555.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
radiotolerans JCM 2831]
gi|170656817|gb|ACB25872.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
radiotolerans JCM 2831]
Length = 350
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 25/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 36 ISVTDRCDLRCAYCMSEHMEFLPKRDLLTLEELDRLCGVFIAR-GVRKLRITGGEPLVRR 94
Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
+RL + L + ++ + + +++ R EL L V +
Sbjct: 95 DIMHLFRRLSRHLDS-GALEELTLTTNGTQL-----TRYADELAS-LGVRRINVSLDTLD 147
Query: 212 --HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + + + I+ AG+ + +V L+ +N D
Sbjct: 148 PDKF---REITRRGDLKVVLDGIAAARAAGMKVKINAVALRDVNAD 190
>gi|15639091|ref|NP_218537.1| translation initiation factor IF-1 [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025331|ref|YP_001933103.1| translation initiation factor IF-1 [Treponema pallidum subsp.
pallidum SS14]
gi|6016311|sp|O83135|IF1_TREPA RecName: Full=Translation initiation factor IF-1
gi|3322358|gb|AAC65092.1| translation initiation factor 1 (infA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017906|gb|ACD70524.1| translation initiation factor 1 [Treponema pallidum subsp. pallidum
SS14]
gi|291059516|gb|ADD72251.1| translation initiation factor IF-1 [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 72
Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
FR+ ++ G +I+ +SG + YI +PG KV + +++ + G
Sbjct: 22 FRVQLQNGHEIL----AYLSGRMRKHYIRIVPGDSVKVALSPYDLSR---GRIMFR 70
>gi|254511318|ref|ZP_05123385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
bacterium KLH11]
gi|221535029|gb|EEE38017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
bacterium KLH11]
Length = 439
Score = 36.2 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 11/98 (11%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148
L + C +C FC R V ++ E + I Q +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIIREAQDLVERGVREITLLGQNVNAYH 209
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
G D L ++ L + ++ +RF + P
Sbjct: 210 GAGPDG----DMTLAALIWELNKVDGLERIRFTTSHPN 243
>gi|109947136|ref|YP_664364.1| hypothetical protein Hac_0545 [Helicobacter acinonychis str.
Sheeba]
gi|109714357|emb|CAJ99365.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 418
Score = 36.2 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
R +K+ C C +C + S +G S ++ L + + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCAKGVQEVVLTG 187
Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
+ R + +++K L I ++ +R S
Sbjct: 188 TNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGS 221
>gi|307353972|ref|YP_003895023.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
DSM 11571]
gi|307157205|gb|ADN36585.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
Length = 362
Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
+ L+++ +C C CF +G ++ +D + + ++ ++ V TGG+P
Sbjct: 28 KALIRITDICNARCVHCFTSA---DNQGETMTLEDFQDFVVPRLKQCRVSRVTLTGGEPF 84
Query: 156 ILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIH 212
+ + ++ ++ + + I + + + I + IQ L E + +++H
Sbjct: 85 LHPN-----IIDFVKLLSNADISVGICTNATV-----ITTDQIQALSHERNVHINVSLH 133
>gi|157822765|ref|NP_001100351.1| molybdenum cofactor biosynthesis protein 1 [Rattus norvegicus]
gi|149069512|gb|EDM18953.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 480
Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
G H Y + + L C + CR+C E V + K +L++++ LA + K + +
Sbjct: 66 GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ TGG+PLI ++ L ++ ++ +
Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151
>gi|189461431|ref|ZP_03010216.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
gi|189431960|gb|EDV00945.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
Length = 472
Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
E +L E ++ + + ++ + I R Y +RI+ L L + C C +C
Sbjct: 49 SHREAAVLLECDDNDLLEEIYALARKIKQRFYGNRIVMFAPLYLSNYCVNSCVYCPYHIK 108
Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
S L+ + + +Q+ I G DPL + + + +KT+ I+H
Sbjct: 109 NKSIARKKLTQDEIRQEVIALQDMGHKRLAIEAGEDPLHNPIEYILESIKTIYSIQH 165
>gi|84502860|ref|ZP_01000973.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
HTCC2597]
gi|84388843|gb|EAQ01713.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
HTCC2597]
Length = 440
Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148
L + C +C FC R V VL+ E + I Q +
Sbjct: 149 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVARVLTEARDLVERGVREITLLGQNVNAYH 208
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
G D L +++ L I+ ++ +RF + P ++ +LI E GK
Sbjct: 209 GEGPDG---RDWSLAGLIRELAEIEGLERIRFTTSHPND----MSDDLIAAHGEVGK 258
>gi|238752394|ref|ZP_04613872.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
gi|238709435|gb|EEQ01675.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
Length = 414
Score = 36.2 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 96 RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R+L + C +C FC + E +L + EAA +Q I + F
Sbjct: 31 RLLYLHIPFCATHCTFCGFYQNPLQPESTARYTDYLLQELNMEAASPLLQGGP-IHAIYF 89
Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
GG P LS ++L +++ LR
Sbjct: 90 GGGTPSALSAEQLHRIISQLRQ 111
>gi|254689196|ref|ZP_05152450.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
str. 870]
gi|260754697|ref|ZP_05867045.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
str. 870]
gi|260674805|gb|EEX61626.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
str. 870]
Length = 344
Score = 36.2 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKHVQ 176
K + ++ L H++
Sbjct: 86 RKNIMHLIGNLSR--HLK 101
>gi|268318084|ref|YP_003291803.1| Radical SAM domain-containing protein [Rhodothermus marinus DSM
4252]
gi|262335618|gb|ACY49415.1| Radical SAM domain protein [Rhodothermus marinus DSM 4252]
Length = 360
Score = 36.2 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 12/109 (11%)
Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
DPI K + H P +L C + CRFC ++ S++ L+ +
Sbjct: 57 GFCIDPIEK------KPLNHFLPGTAVLSFGTAGCNLGCRFCQNWDISKSREMDTLADEA 110
Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
+A + E V FT DP+I L + H + +R
Sbjct: 111 APETIARVAEALGCRSVAFTYNDPVIFHEYALD-----VARACHERGIR 154
>gi|313900907|ref|ZP_07834397.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
HGF2]
gi|312954327|gb|EFR36005.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
HGF2]
Length = 472
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 27/166 (16%)
Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
Y +RI+ L L + C C +C + L+ ++ + +Q+
Sbjct: 77 QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLTQEEIRQEVIALQDMGHKR 136
Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201
+ TG DP+ + + + +KT+ IKH ++ + V+ + + LK
Sbjct: 137 LALETGEDPVHSPIEYVLESIKTIYGIKHKNGAIRRV-------NVNIAATTVDNYRKLK 189
Query: 202 EAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
EAG K Y +H N P A+ R GI
Sbjct: 190 EAGIGTYILFQETYNKQSYEQLHPNGPKSNYAYHTEAMDRAMEGGI 235
>gi|282904508|ref|ZP_06312393.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus C160]
gi|282919711|ref|ZP_06327443.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp.
aureus C427]
gi|297590071|ref|ZP_06948711.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus MN8]
gi|282316349|gb|EFB46726.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp.
aureus C427]
gi|282595064|gb|EFC00031.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus C160]
gi|297577199|gb|EFH95913.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus MN8]
gi|315193403|gb|EFU23800.1| hypothetical protein CGSSa00_04716 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 381
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109
>gi|90423576|ref|YP_531946.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
palustris BisB18]
gi|90105590|gb|ABD87627.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris BisB18]
Length = 344
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 64/171 (37%), Gaps = 35/171 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + C +C +M + +L+ ++ + + + ++ TGG+PL+
Sbjct: 29 VSITDRCDLRCVYCMSEDMTFLPRADLLTLEELDRLCSAFIA-KGVKKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKH---VQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+ + ++++L H + L S++ R EL C V +
Sbjct: 86 RRNMMSLVRSLSRHLHTGALDELTLTTNGSQL-----ARYAAELADC-GVRRINVSLDT- 138
Query: 213 ANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDD 250
+ AI+R +AG+ + +V LK +N+D
Sbjct: 139 ------LDPDKFRAITRWGDLGKVLAGIDAARDAGLAVKINAVALKDVNED 183
>gi|258515371|ref|YP_003191593.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257779076|gb|ACV62970.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 291
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGGDP 154
+++++ C C FC M ++ + S ++ +A + Y + + V GD
Sbjct: 17 LIIQVTIGCKHNACSFCG---MYREKRFRIKSWEEIKADIDYCKINYLHVRRVFLADGDA 73
Query: 155 LILSHKRLQKVLKTLRYI-KHVQIL 178
L + + K+L L + ++ +
Sbjct: 74 LAMESAEIIKILDYLYEVFPGLERI 98
>gi|240104125|ref|YP_002960434.1| molybdenum cofactor biosynthesis protein A [Thermococcus
gammatolerans EJ3]
gi|239911679|gb|ACS34570.1| Molybdenum cofactor biosynthesis protein A (moaA) [Thermococcus
gammatolerans EJ3]
Length = 308
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 43/170 (25%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAA 134
P+ D P+ + + L C C FC R + + + ++ ++ E
Sbjct: 2 PLYDRFGRPVTNLR--------ISLTQECNFRCFFCHREGQRFLAKNE---MTPEEIERI 50
Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQ 190
+ I + I +V TGG+P + +L+ +R I +V L SR+
Sbjct: 51 VR-IASRLGIRKVKLTGGEPTVRED-----ILEIVRRIKPYVIDLSMTTNGSRL------ 98
Query: 191 RINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
EL + L +AG V +++H E I G+ L+
Sbjct: 99 ---KELAKPLAKAGLNRVNVSLH-----SLKPEVYKKI-----TGVDALN 135
>gi|167950322|ref|ZP_02537396.1| hypothetical protein Epers_29333 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 344
Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 35/113 (30%), Gaps = 24/113 (21%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKG 123
E L + DP G+ + L L CP CR C F
Sbjct: 181 RERLALLDGLPDPGGETRFAKLG-----------LIPAMGCPQTCRHCMFIWR------- 222
Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
+ E Y V+FTGGD + L +R ++H++
Sbjct: 223 -PPVKQQLEPQSLYQLVDGLTESVLFTGGDL----TRHLDHFYAAIRSMRHIR 270
>gi|228949221|ref|ZP_04111488.1| Radical SAM domain protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810447|gb|EEM56801.1| Radical SAM domain protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 468
Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 57 ARQFIPQKEELN-----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
R+ I EEL ++ +D D + P Y + L + H C + C +
Sbjct: 62 LRETIADIEELKRDGKLFTEDDYKDLSIDLINRPT------YVKALCLNVAHTCNLSCEY 115
Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167
CF + + ++S + + A+ ++ E S +V F GG+PL+ K +++++
Sbjct: 116 CFASQGKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173
>gi|218884694|ref|YP_002429076.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
gi|218766310|gb|ACL11709.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
Length = 572
Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 37/224 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGDP 154
+ + + + C + C +CF G V + + I+++ + TGG+P
Sbjct: 125 VNMVVTNRCNLSCWYCF---FYSEASGYVYEPRLDQIREMVRSIKKQGVTVAIQLTGGEP 181
Query: 155 LILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
L+ L ++K L ++H+Q+ +RF + I DP + E + L+ +G
Sbjct: 182 LLRED--LVDIVKLLKEEGVRHIQLNTNGIRFA-ELYIEDPVKAV-EYARELRSSGVNTV 237
Query: 209 I-----AIHA----NHPYEFSEEAIAAISRLANAGI--ILLSQSVLLKGINDD-----PE 252
NH E + AG+ +L +V+ KG+N
Sbjct: 238 YLSFDGVTPVTNWKNHW-----EVPYILETFRKAGMTSTVLVPTVI-KGVNTHELGAIVR 291
Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
A M + +P L +R+TI E K++
Sbjct: 292 FAAKHMDVIRAVNFQPVSLTGYMKKHEREKYRITIPEVVKLIEE 335
>gi|83590961|ref|YP_430970.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
gi|123725642|sp|Q2RGL2|MOAA_MOOTA RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|83573875|gb|ABC20427.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
Length = 323
Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 18/162 (11%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C V + + + A LA + + I + TGG+PL+
Sbjct: 14 IAITDRCNLRCRYCMPATGVPLKGHEDILRLEEIATLARVAAGTGISRIRLTGGEPLV-- 71
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA---N 214
K + +++ L I ++ + + L LKEAG K V I++ +
Sbjct: 72 RKNVVTLVRELAAIPGLEEISLTTNGI------FLGALAFSLKEAGLKRVNISLDTLKKD 125
Query: 215 HPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
+ I AG+ + V+ +G NDD
Sbjct: 126 RYRYITRRGNITSVWQGIRAALAAGLTPVKLNVVITRGFNDD 167
>gi|62289889|ref|YP_221682.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 1
str. 9-941]
gi|82699819|ref|YP_414393.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
biovar Abortus 2308]
gi|189024134|ref|YP_001934902.1| molybdenum cofactor biosynthesis protein A [Brucella abortus S19]
gi|237815389|ref|ZP_04594387.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str.
2308 A]
gi|254697332|ref|ZP_05159160.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
str. 86/8/59]
gi|254730230|ref|ZP_05188808.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
str. 292]
gi|256257446|ref|ZP_05462982.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
str. C68]
gi|260545361|ref|ZP_05821102.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC
8038]
gi|260757921|ref|ZP_05870269.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
str. 292]
gi|260761743|ref|ZP_05874086.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
str. 86/8/59]
gi|260883723|ref|ZP_05895337.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
str. C68]
gi|297248294|ref|ZP_06932012.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5
str. B3196]
gi|75496872|sp|Q57DG3|MOAA_BRUAB RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|123740914|sp|Q2YNT7|MOAA_BRUA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|226704812|sp|B2S5I1|MOAA_BRUA1 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|62196021|gb|AAX74321.1| MoaA, molybdenum cofactor biosynthesis protein A [Brucella abortus
bv. 1 str. 9-941]
gi|82615920|emb|CAJ10929.1| MoaA/nifB/pqqE family:Elongator protein 3/MiaB/NifB:Radical SAM
[Brucella melitensis biovar Abortus 2308]
gi|189019706|gb|ACD72428.1| MoaA/nifB/pqqE family protein [Brucella abortus S19]
gi|237790226|gb|EEP64436.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str.
2308 A]
gi|260096768|gb|EEW80643.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC
8038]
gi|260668239|gb|EEX55179.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
str. 292]
gi|260672175|gb|EEX58996.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
str. 86/8/59]
gi|260873251|gb|EEX80320.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
str. C68]
gi|297175463|gb|EFH34810.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5
str. B3196]
Length = 344
Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + E + ++ TGG+PL+
Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85
Query: 159 HKRLQKVLKTLRYIKHVQ 176
K + ++ L H++
Sbjct: 86 RKNIMHLIGNLSR--HLK 101
>gi|300871623|ref|YP_003786496.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
gi|300689324|gb|ADK31995.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
Length = 474
Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C L+ + A + +Q+ + TG DP S
Sbjct: 94 LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153
Query: 159 HKRLQKVLKTLRYIKH 174
+ L + +KT+ IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169
>gi|291296099|ref|YP_003507497.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
ruber DSM 1279]
gi|290471058|gb|ADD28477.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
ruber DSM 1279]
Length = 384
Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 15/123 (12%)
Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-I 144
+ H Y + CP C +C F + + A ++ +
Sbjct: 4 PALQHLY------LHVPFCPTICPYCDFHVVRRYGDVVEAYLKRLAQEARGLFEQHPGPL 57
Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
+ GG P L L+ + + L + I+ ++ +P +NPE ++ L+E
Sbjct: 58 TTLYLGGGTPSFLRSHELEALFRALPWNIEAAEV------TLEANPGTLNPERLRLLREL 111
Query: 204 GKP 206
G
Sbjct: 112 GVN 114
>gi|225619004|ref|YP_002720230.1| thiamine biosynthesis protein ThiH [Brachyspira hyodysenteriae WA1]
gi|225213823|gb|ACN82557.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
Length = 474
Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L L + C C +C L+ + A + +Q+ + TG DP S
Sbjct: 94 LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153
Query: 159 HKRLQKVLKTLRYIKH 174
+ L + +KT+ IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169
>gi|85705226|ref|ZP_01036325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
gi|85670099|gb|EAQ24961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
Length = 446
Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 13/110 (11%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC GS+ ++ E A ++ + E+ G +
Sbjct: 156 TAFLTVQEGCDKFCAFCVVPYTRGSEVSRPVARV-LEEARDLVER--GVREITLLGQNVN 212
Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
L +++ L I ++ +RF + P ++ +LI
Sbjct: 213 AYHGAGEGGDWGLARLIWALNDIDGLERIRFTTSHPND----MDDDLIAA 258
>gi|121534167|ref|ZP_01665992.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
gi|121307270|gb|EAX48187.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
Length = 413
Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 27/178 (15%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L+L C C C+ + V + ++ + F GG+PL+
Sbjct: 98 VWLELTASCNNRCLHCYATSGPCAGYDAVPHDRWLSLITE--ARQAGATAIQFIGGEPLL 155
Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
R Q++ + R + ++I + I+ + I+ +K+ + IA
Sbjct: 156 YP--RWQELAQRARQDGYEFIEIFTNAT--------LIDDDCIKFVKD--NQINIATTIY 203
Query: 215 HPY-----EFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
+ + +AA+ +L AG+ L S+++K ++ E + L
Sbjct: 204 AANAAVHDRVTLNPGSFNQTMAAVRKLLAAGVPLRIASIIMKANEEEAENIMKLCEEL 261
>gi|329904141|ref|ZP_08273687.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480]
gi|327548124|gb|EGF32841.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480]
Length = 404
Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 95 DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----- 146
++++LK++ C + C +C+ R + + V+S + I E + +
Sbjct: 18 NQVILKIVQRCNLDCTYCYVYNRGDDSWKSRPPVISERVLLRLAERINEHCRRHQLSSFT 77
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IK--HVQ 176
+ GG+PL++ +++Q +L LR I HV+
Sbjct: 78 IELHGGEPLLIGKRKMQALLTLLRSRIDAAHVR 110
>gi|189461331|ref|ZP_03010116.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
gi|189431860|gb|EDV00845.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
Length = 432
Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
LK+ C C +C + G K ++ + + + E+ +
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRLLVSEGVKEFQVIAQELTYY 195
Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
G D + + L ++++ + I V+ +R H P EL + ++E
Sbjct: 196 GVD--LYKKQMLPELIERMAEIPGVKWIRLH----YAYPAHFPKELFRVMREH 242
>gi|159043568|ref|YP_001532362.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Dinoroseobacter shibae DFL 12]
gi|229890517|sp|A8LSE7|MIAB_DINSH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157911328|gb|ABV92761.1| RNA modification enzyme [Dinoroseobacter shibae DFL 12]
Length = 437
Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + +++ A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAARVLTEARDLVER--GVREITLLGQNVN 206
Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
+ L ++ L I ++ +RF + P
Sbjct: 207 AYHGHARGLAGLIWDLAEIDGLERIRFTTSHPN 239
>gi|168187980|ref|ZP_02622615.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
gi|169294199|gb|EDS76332.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
Length = 456
Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVVAHSGPRKNIEVDLFGGEPL 158
>gi|298695215|gb|ADI98437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 381
Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P E + + ++ L I ++C + C C +
Sbjct: 10 IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109
>gi|237732895|ref|ZP_04563376.1| predicted protein [Mollicutes bacterium D7]
gi|229384048|gb|EEO34139.1| predicted protein [Coprobacillus sp. D7]
Length = 277
Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
L CP C FC R+ +G K E+ + E + TGG+P + +
Sbjct: 52 LITTQECPYNCPFCLERQNP--MEGNQDFKKQIESLKGVLSEHPNAR-LTITGGEPGLYT 108
Query: 159 HK 160
Sbjct: 109 DH 110
>gi|282880323|ref|ZP_06289037.1| putative oxygen-independent coproporphyrinogen III oxidase
[Prevotella timonensis CRIS 5C-B1]
gi|281305825|gb|EFA97871.1| putative oxygen-independent coproporphyrinogen III oxidase
[Prevotella timonensis CRIS 5C-B1]
Length = 386
Score = 36.2 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 32/166 (19%)
Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-------AYI--------QEKS 142
L + C C +C S L K +A Y+ ++
Sbjct: 4 LYLHIPFCASRCIYCG----FYSTTNLSLRQKYVDALCQELRLRRDYLSDIETNLSEDTH 59
Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRV-PIVDPQRINPELIQ 198
I + GG P L+ +LQ++ + + I ++ +R V +P I+P ++
Sbjct: 60 LIRTIYIGGGTPSQLTPAQLQQIFEVIGSIYFNGNLSTMRSQCEVTLECNPDDISPSFVE 119
Query: 199 CLKEA-------GKPVYIAIHAN--HPYEFSEEAIAAISRLANAGI 235
++++ G + N H +E+ A++RL G+
Sbjct: 120 FIEQSPINRISMGVQTFSNAQLNFLHRRHQAEDVATAVNRLREIGV 165
>gi|327312397|ref|YP_004327834.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
F0289]
gi|326946389|gb|AEA22274.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
F0289]
Length = 434
Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 39/186 (20%)
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKD--TEAALAYIQ-----------EKSQ 143
L + C C +C F + +G S ++ +A ++ E ++
Sbjct: 4 LYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETAE 63
Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-------RVPI-----VDPQ 190
+ + GG P LS + L ++ T+ + H+ R + PI +P
Sbjct: 64 LTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRRQGCAAAPIEVTMECNPD 123
Query: 191 RINPELIQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGIILLSQS 241
+ E + L+ + H + EA++A+ RL AGI + S
Sbjct: 124 DVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGI--GNIS 181
Query: 242 V-LLKG 246
V L+ G
Sbjct: 182 VDLMFG 187
>gi|212710494|ref|ZP_03318622.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM
30120]
gi|212686914|gb|EEB46442.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM
30120]
Length = 317
Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 11/61 (18%)
Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273
+ RL G ++ + L++G ND + + L + + I PY H
Sbjct: 215 VRRNLERLMELGANVVMRMPLVRGYNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272
Query: 274 P 274
Sbjct: 273 L 273
>gi|167745954|ref|ZP_02418081.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662]
gi|167654469|gb|EDR98598.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662]
Length = 472
Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+ L L + C C +C + LS ++ + + +Q+ +
Sbjct: 80 YGNRIVMFAPLYLANYCVNGCVYCPYHYKNKHIRRKKLSQEEIKKEVIALQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
TG DP+ + + + + +KT+ IKH
Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYGIKH 165
>gi|16124274|ref|NP_418838.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
CB15]
gi|221232957|ref|YP_002515393.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
NA1000]
gi|24212006|sp|Q9AC48|MOAA_CAUCR RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|13421106|gb|AAK22006.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
CB15]
gi|220962129|gb|ACL93485.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
NA1000]
Length = 349
Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 37/180 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
+ + C + C +C M K VL+ ++ + + + ++ TGG+PL+
Sbjct: 36 VSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 94
Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
LS L ++ L + R R V + P L +
Sbjct: 95 GFIGLVARLSRHLSSGALDELTLTTNGSQLERYAS-DLARHGVRRINVSLDTLKPALFRA 153
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
L G IA I AG+ + +V LK D+ + L++
Sbjct: 154 LTRGGD--------------VTRVIAGIDAAQAAGMTVKINAVALKH--DNAGEIPALIQ 197
>gi|75759721|ref|ZP_00739802.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228904932|ref|ZP_04068985.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222]
gi|74492798|gb|EAO55933.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228854707|gb|EEM99312.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222]
Length = 468
Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149
Y + L + H C + C +CF + + ++S + + A+ ++ E S +V F
Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGNRAIMSFEVGKRAIDFLLENSGNHRNLDVDF 156
Query: 150 TGGDPLILSHKRLQKVLK 167
GG+PL+ K +++++
Sbjct: 157 FGGEPLMA-WKTVKQIVA 173
>gi|321313919|ref|YP_004206206.1| galactarate dehydratase [Bacillus subtilis BSn5]
gi|320020193|gb|ADV95179.1| galactarate dehydratase [Bacillus subtilis BSn5]
Length = 510
Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 151 GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
G D L L R +++++ + +++R +SR + P +L+ L+ G +
Sbjct: 226 GDDILSLQDHRGFAAMIQSILEMAEERLIRLNSRTRVSCP---VSDLVIGLQCGGSDAFS 282
Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILL 238
+ AN A L AG +L
Sbjct: 283 GVTAN------PAVGYAADLLVRAGATVL 305
>gi|282917222|ref|ZP_06324977.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp.
aureus D139]
gi|283771026|ref|ZP_06343917.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus H19]
gi|282318849|gb|EFB49204.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp.
aureus D139]
gi|283459620|gb|EFC06711.1| radical SAM superfamily domain-containing protein [Staphylococcus
aureus subsp. aureus H19]
Length = 381
Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109
>gi|221632343|ref|YP_002521564.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159]
gi|221156232|gb|ACM05359.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159]
Length = 379
Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 222 EAIAAISR-LANAGIILLSQSVLLKGINDDPEILANLMRTFVEL----RIKPYYLHHPDL 276
E +AA R +A G + + VL++ +NDD A L R L + PY +
Sbjct: 264 ELLAACRRYVARTGRRVTFEYVLIEDVNDDERTAAELARRLRGLLCHVNLIPY-----NP 318
Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
FR E + ++ E+ P +
Sbjct: 319 TPAAPLFRRPGPERIERFRAVLER---YGIPATVR 350
>gi|188582088|ref|YP_001925533.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
gi|179345586|gb|ACB80998.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
Length = 410
Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 37/193 (19%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
R + + + C C FC G + + A + I E EV+ TG D
Sbjct: 128 HTRAFVPVQNGCDHRCTFCVIP--FGRGHSRSVPVAEAVAQVRRIVEHGG-REVVLTGVD 184
Query: 154 PLI------LSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
L S L ++++T L + + LR S +D +PELI E +
Sbjct: 185 -LTAYGRDLASDLSLGRLVRTILSEVPDLARLRLSS----IDSVEADPELIAAFAEESR- 238
Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
+ H + + ++ I + R+ + + L RT +LR
Sbjct: 239 --LMPHVHLSLQAGDDLI--LKRMKRRHA--------------RADAIR-LCRTLRDLR- 278
Query: 267 KPYYLHHPDLAAG 279
P + DL AG
Sbjct: 279 -PGLVFGADLIAG 290
>gi|313813065|gb|EFS50779.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL025PA1]
gi|327330771|gb|EGE72517.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL097PA1]
Length = 407
Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 22/125 (17%)
Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120
P ++ + + + P G Y + C C +C F ++ +
Sbjct: 6 PYPRITRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57
Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
+ ++ E A + + + + F GG P +LS +L ++ I
Sbjct: 58 MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111
Query: 174 HVQIL 178
HV+ L
Sbjct: 112 HVRTL 116
>gi|289642406|ref|ZP_06474552.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
Datisca glomerata]
gi|289507751|gb|EFD28704.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
Datisca glomerata]
Length = 328
Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 41/222 (18%)
Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
+ L C + C +C E + + +L+ ++ + + + EV TGG+P L
Sbjct: 16 VSLTDRCNLRCSYCMPAEGLAWLPRAGILTDEEIVRLVRIAVTRLGVDEVRLTGGEP-TL 74
Query: 158 SHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHAN 214
L L LR + + + + P L+ AG V +++
Sbjct: 75 RPGLVGLVARLARLRPRPQLSMTTNGIALVGMAPA---------LRAAGLDRVNVSLDTL 125
Query: 215 HPYEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDDPEILANLMRTFVE 263
P + RLA+A + + +VLL+G+NDD +L+R +
Sbjct: 126 RPGRYQALTRR--DRLADAQAGLAAVAAAGLVPVKVNAVLLRGVNDDEA--PDLLRWCLR 181
Query: 264 LRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKE 299
+ + R + G +I+A L+
Sbjct: 182 RG------YQLRFIEQMPLDPQHSWDRAAMVTGAEILAGLRG 217
>gi|163741718|ref|ZP_02149108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
2.10]
gi|161384891|gb|EDQ09270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
2.10]
Length = 440
Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206
Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
K L +++ L + ++ +RF + P
Sbjct: 207 AYHGAGPNGDKTLAQLIWELDKVDGLERIRFTTSHPN 243
>gi|298708530|emb|CBJ49163.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 425
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 20/95 (21%)
Query: 194 PELIQCLKEAGKPVYIAIHANHP---YEFSEEAIAAISRLANAGIILLSQS--------- 241
P I+ +K + ++HA + +++ L +A +L QS
Sbjct: 257 PAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHSMAELRDAFAEVL-QSRRREHLFVE 315
Query: 242 -VLLKGINDDPE---ILANLMRTF-VELRI--KPY 269
VL++G+ND PE LA+L+R + I PY
Sbjct: 316 VVLIEGMNDSPELARALASLLRPLPIRAGINLLPY 350
>gi|218288632|ref|ZP_03492909.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
LAA1]
gi|218241289|gb|EED08464.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
LAA1]
Length = 475
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + +A ++ E++ T
Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + RL +L L I +R S ++ I+ L+ L + K
Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250
Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232
V +H H + + E + L
Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLQELRR 288
>gi|163734559|ref|ZP_02141998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
litoralis Och 149]
gi|161392052|gb|EDQ16382.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
litoralis Och 149]
Length = 426
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
ED + P R P L + C +C FC R V VL
Sbjct: 117 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 172
Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
E + I Q + G D + + L +++ L I ++ +RF + P
Sbjct: 173 RDLVERGVREITLLGQNVNAYHGAGADG---NEQTLAQLIWALNDIDGLERIRFTTSHPN 229
>gi|187929569|ref|YP_001900056.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia
pickettii 12J]
gi|309781652|ref|ZP_07676386.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA]
gi|187726459|gb|ACD27624.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12J]
gi|308919627|gb|EFP65290.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA]
Length = 400
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
N D + +P+ G P +L +L + CP++C FC + ++ LS
Sbjct: 4 NAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQELS 58
Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
++ + + ++ +GG+PL+ L+TL H
Sbjct: 59 TEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98
>gi|189426248|ref|YP_001953425.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
gi|238066235|sp|B3EAM2|RIMO_GEOLS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
Short=S12 MTTase; Short=S12 methylthiotransferase;
AltName: Full=Ribosome maturation factor RimO
gi|189422507|gb|ACD96905.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
Length = 449
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 16/116 (13%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154
LK+ C C +C + G + + + + E + + E+I D
Sbjct: 153 AYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVK-----GGVRELILVSQDI 207
Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
+ L +++ L I+ ++ +R P I+ ELI+ K K
Sbjct: 208 TRYGSDMDDTSSLAGLIRRLAAIEDLKWIRL----LYAYPDGISDELIELFKTEPK 259
>gi|50842395|ref|YP_055622.1| coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202]
gi|282854145|ref|ZP_06263482.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes J139]
gi|50839997|gb|AAT82664.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes KPA171202]
gi|282583598|gb|EFB88978.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes J139]
Length = 393
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149
+ + C C +C F ++ + + ++ E A + + + + F
Sbjct: 20 IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 79
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG P +LS +L ++ I H++ L
Sbjct: 80 GGGTPTMLSPVQLGEL------IDHIRTL 102
>gi|46199876|ref|YP_005543.1| florfenicol resistance protein [Thermus thermophilus HB27]
gi|81567593|sp|Q72HC1|RLMN_THET2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|46197503|gb|AAS81916.1| florfenicol resistance protein [Thermus thermophilus HB27]
Length = 355
Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%)
Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
Y +R + L + CP C FC + G L++ + L I +I
Sbjct: 95 YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151
Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
V+ G G+PL+ L+ VLK +R + H + + P+R+ + K
Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200
Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
+ G + +++HA H Y E E ++ +
Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258
Query: 242 VLLKGINDD---PEILANLMRTF 261
LLKG+ND +LA L++
Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280
>gi|260888390|ref|ZP_05899653.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|330838294|ref|YP_004412874.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|260861926|gb|EEX76426.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
gi|329746058|gb|AEB99414.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
Length = 346
Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R L++ ++C C +C R + L S++ + V+ G D
Sbjct: 52 RGLIEFTNICRRSCFYCGLRRENERAERYRLRSQEIVRLAQNARGYGYRTVVLQGGEDGY 111
Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
+RL +L+ +R + V L R E + LKEAG ++
Sbjct: 112 WH-VERLAPILREIRALGLVITLSIGER---------TEEEYRALKEAGASRFLLRIETT 161
Query: 216 PYEF--------SEEAIAAI-SRLANAGIILLS--------QSV 242
E S EA A + L G + + QSV
Sbjct: 162 DRELYERLDPGMSWEARRACLASLRALGYEVGTGSLVGLPGQSV 205
>gi|149202109|ref|ZP_01879082.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
gi|149144207|gb|EDM32238.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
Length = 440
Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 73 EREDPIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
+ E PI D + + HR R L + C +C FC G++ + +S
Sbjct: 127 DTEFPIEDKFDT----LRHRPKARRGPTAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAS 181
Query: 129 KDTEAALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
+ E A ++ + E+ G + L +++ L I ++ +RF +
Sbjct: 182 RVLEEARDLVER--GVREITLLGQNVNAYHGAGEGGDWGLARLVWALSEIDGLERIRFTT 239
Query: 183 RVPIVDPQRINPELIQC 199
P ++ +LI
Sbjct: 240 SHPND----MDDDLIAA 252
>gi|88195773|ref|YP_500582.1| hypothetical protein SAOUHSC_02090 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|221141450|ref|ZP_03565943.1| hypothetical protein SauraJ_07398 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|87203331|gb|ABD31141.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|302751749|gb|ADL65926.1| putative Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|329728682|gb|EGG65112.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
21189]
Length = 381
Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
+ P E + + ++ L I ++C + C C +
Sbjct: 10 IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109
>gi|304379061|ref|ZP_07361808.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|304342296|gb|EFM08188.1| radical SAM superfamily domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
Length = 381
Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 16/115 (13%)
Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
++ P E + + ++ L I ++C + C C
Sbjct: 9 IIHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQT 55
Query: 126 LSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 56 VDPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109
>gi|254521416|ref|ZP_05133471.1| lysophospholipase [Stenotrophomonas sp. SKA14]
gi|219719007|gb|EED37532.1| lysophospholipase [Stenotrophomonas sp. SKA14]
Length = 583
Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 27/60 (45%)
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
R+ + Q+++ +++ G P +LD+ G+G+ ++ + + D ++
Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442
>gi|254467232|ref|ZP_05080643.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
Y4I]
gi|206688140|gb|EDZ48622.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
Y4I]
Length = 440
Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
L + C +C FC G++ + + + A ++ + E+ G +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206
Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
L +++ L I ++ +RF + P
Sbjct: 207 AYHGAGPNGDLTLAQLIWELDKIDGLERIRFTTSHPN 243
>gi|190576078|ref|YP_001973923.1| putative hydrolase [Stenotrophomonas maltophilia K279a]
gi|190014000|emb|CAQ47640.1| putative hydrolase [Stenotrophomonas maltophilia K279a]
Length = 583
Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 27/60 (45%)
Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
R+ + Q+++ +++ G P +LD+ G+G+ ++ + + D ++
Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442
>gi|332982414|ref|YP_004463855.1| hypothetical protein Mahau_1856 [Mahella australiensis 50-1 BON]
gi|332700092|gb|AEE97033.1| protein of unknown function DUF512 [Mahella australiensis 50-1 BON]
Length = 436
Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 195 ELIQCLKEAGKPVYIAIHANHP--YEF------SEEAIAAISRLANAGIILLSQSVLLKG 246
++ + K P+Y++IHA P F ++ + + R I++ Q VL G
Sbjct: 134 DIDRITKMHISPLYVSIHAVDPKVRSFMLGIPETDNIMNILQRFKEHNIMVHGQMVLCPG 193
Query: 247 IN------DDPEILANLMRTFVELRIKP 268
IN D + L L + L + P
Sbjct: 194 INDGDVLDDSIKRLMELWPSLQSLAVVP 221
>gi|311899066|dbj|BAJ31474.1| putative molybdenum cofactor biosynthesis protein A [Kitasatospora
setae KM-6054]
Length = 346
Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 36/182 (19%)
Query: 93 YPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y R + + L C + C +C E + K +L+ ++ +A + EV
Sbjct: 23 YGRRAVDLRVSLTDRCNLRCTYCMPEEGLSWLGKPELLTDEEIVRLVALAVGTLGVREVR 82
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----------VQILRFHSRV-------PIVDPQR 191
FTGG+PL+ L ++ ++ + + R + V
Sbjct: 83 FTGGEPLL--RPGLVGIIAACAALEPRPEVSLTTNGIGLARIAPALRDAGVDRVNVSLDT 140
Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
++P+ L + H A A + L + +VL++G+ND
Sbjct: 141 LDPDTFATLTRRRR---------HQDVLDGLAAAEAAGLR----PVKLNAVLMRGVNDHE 187
Query: 252 EI 253
Sbjct: 188 AA 189
>gi|224368537|ref|YP_002602700.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
gi|223691253|gb|ACN14536.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
Length = 329
Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 23/180 (12%)
Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
HR+ + + + + C + C +C +L+ ++ + K I +V
Sbjct: 10 HRHLNYLRVSITDRCNLRCLYCIPDGIFPMLSHEEILTYEEILRIVKT-GSKMGISKVRI 68
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQC 199
TGG+PL+ K L L IK + + + +++ RIN L
Sbjct: 69 TGGEPLV--RKGACDFLSRLSKIKGLLDISLTTNGVLLEKNIEQIKAAGIHRINVSLDTL 126
Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDP-EILANL 257
+ K + + I AG + V++KGINDD E LA L
Sbjct: 127 QPKKYKQITRMNMF-------KRVWDGIMAAHAAGFSPIKLNVVVMKGINDDEIEDLARL 179
>gi|55981906|ref|YP_145203.1| ribosomal RNA large subunit methyltransferase N [Thermus
thermophilus HB8]
gi|81363686|sp|Q5SGZ3|RLMN_THET8 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
AltName: Full=23S rRNA m2A2503 methyltransferase
gi|55773319|dbj|BAD71760.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 355
Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%)
Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
Y +R + L + CP C FC + G L++ + L I +I
Sbjct: 95 YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151
Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
V+ G G+PL+ L+ VLK +R + H + + P+R+ + K
Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200
Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
+ G + +++HA H Y E E ++ +
Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258
Query: 242 VLLKGINDD---PEILANLMRTF 261
LLKG+ND +LA L++
Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280
>gi|151222027|ref|YP_001332849.1| hypothetical protein NWMN_1815 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|150374827|dbj|BAF68087.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 381
Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
++ P E + + ++ L I ++C + C C +
Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56
Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
+ + L Y + E + + TGG+P + S K ++ V+K L H + +
Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109
>gi|89053188|ref|YP_508639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Jannaschia sp.
CCS1]
gi|122999629|sp|Q28UJ8|MIAB_JANSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|88862737|gb|ABD53614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Jannaschia sp. CCS1]
Length = 462
Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 9/97 (9%)
Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
L + C +C FC R V +++ + + I Q
Sbjct: 172 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRSAERLMAEARDLVDRGVREITLLGQNVNAYH 231
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
GD L ++++ + I + +RF + P
Sbjct: 232 GAGDGGTWG---LARLIREMAKIDGLDRIRFTTSHPN 265
>gi|290956407|ref|YP_003487589.1| hypothetical protein SCAB_19011 [Streptomyces scabiei 87.22]
gi|260645933|emb|CBG69024.1| putative hypothetical protein [Streptomyces scabiei 87.22]
Length = 801
Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 16/116 (13%)
Query: 98 LLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
++K+ C + C C+ + + +S + I E + V+
Sbjct: 12 VIKVHSRCDLACDHCYVYQHADQSWRGRPGTMSEETFRRTAERIAEHAAAHRLPRVHVVL 71
Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHV--QILRFHSRVPIVDPQRINPELIQCLKE 202
GG+PL+ +RL+ + LR + V LR + R++ L E
Sbjct: 72 HGGEPLLAGRERLRGYARALRSALDGVAALDLRMQTNGL-----RLDDAFCAMLVE 122
>gi|149919125|ref|ZP_01907609.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
gi|149820055|gb|EDM79476.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
Length = 261
Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
R + C + C +C + +G S +A + + Q V+ TGG+PL
Sbjct: 37 RSSFVRVSGCNLRCVWCDTPRTSWAPEGERAS---LDALVDWCGAPGQPRHVVLTGGEPL 93
Query: 156 ILSHKRLQKVLKTLRYIKHVQIL 178
+ ++ LR H +
Sbjct: 94 LFPAC--AELSARLRAAGHHLTI 114
>gi|326797578|ref|YP_004315397.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
gi|326548342|gb|ADZ76727.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
21]
Length = 329
Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 24/173 (13%)
Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
G +H Y + + L C + C +C + ++ + + + + +
Sbjct: 10 GRLHNY---LRISLTDNCNLRCFYCMPEEHYAFTPHAKLMQVHEIDQLAKIFVDH-GVTK 65
Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQI------LRFH---SRVPIVDPQRINPELI 197
+ TGG+PL+ +++ L + V++ +R + ++ + IN L
Sbjct: 66 IRLTGGEPLVRKDAP--AIIEILSKLP-VELTMTTNGIRINDMLPQIVKANFSSINVSLD 122
Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
+E + + N I L I V++KG+NDD
Sbjct: 123 TLQREKFNRITRRDYFNR-------VRHNIDLLIKEQIHTKINVVVMKGLNDD 168
>gi|239987825|ref|ZP_04708489.1| hypothetical protein SrosN1_11005 [Streptomyces roseosporus NRRL
11379]
Length = 339
Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL L CP+ C C G E + E+++ V+ TGG+PL+
Sbjct: 17 LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRY 171
L L + L TL
Sbjct: 75 LPA--LAERLSTLAR 87
>gi|94265921|ref|ZP_01289648.1| Radical SAM [delta proteobacterium MLMS-1]
gi|93453545|gb|EAT03950.1| Radical SAM [delta proteobacterium MLMS-1]
Length = 343
Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 36/184 (19%)
Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH--KR 161
C + C +C+ + ++ LS + + + V+ GG+PL+
Sbjct: 36 ACNIRCIYCYAESGLPLEQELTLS--EIKQVVDQAAGLGARKVVVLGGGEPLLYPDIFTV 93
Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
L +L I + I P + + LKE + V + + N +
Sbjct: 94 LDYILNKGMKAD---IFTNGT--------LITPAVARHLKE--REVAVVVKMNSRDAAVQ 140
Query: 222 EAIAAIS-----------RLANAGII-----LLSQSVLLKGINDDPEILANLMRTFVELR 265
+ +A L G L Q+++ + + L +L R
Sbjct: 141 DLLAGCRGTFAAIEKGLAALREVGYPGDNLLLGVQTIVCRH---NYRELPDLWRWARRRN 197
Query: 266 IKPY 269
I PY
Sbjct: 198 IIPY 201
>gi|299138990|ref|ZP_07032167.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
gi|298599144|gb|EFI55305.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
Length = 534
Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 28/176 (15%)
Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
CP +C FC G + ++ + I + ++ D P+ L+
Sbjct: 167 RGCPKHCSFCSVWR----TDGQQPRQRRFQSVIDEIVDLRRLGFRFIALADDNFYPVTLT 222
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-HPY 217
RL + + + +R +R +L++ L + K +
Sbjct: 223 DLRLAREQNNTAKVDELMAIRT---------ERF--QLMEELAKLPKDMVFFTQITMEAG 271
Query: 218 EFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266
E E + A+ + G ++ ++V LK + N + LA ++TF + +
Sbjct: 272 E-DGEYLDAMRKANIKGALVGVEAVTPEGLKAVFKDFNYSGDALAKQLQTFKKHGV 326
>gi|239941362|ref|ZP_04693299.1| hypothetical protein SrosN15_10231 [Streptomyces roseosporus NRRL
15998]
gi|291444804|ref|ZP_06584194.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291347751|gb|EFE74655.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 351
Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+LL L CP+ C C G E + E+++ V+ TGG+PL+
Sbjct: 17 LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74
Query: 157 LSHKRLQKVLKTLRY 171
L L + L TL
Sbjct: 75 LPA--LAERLSTLAR 87
>gi|72161103|ref|YP_288760.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX]
gi|71914835|gb|AAZ54737.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX]
Length = 306
Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 17/91 (18%)
Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
+ +DT+ A + E +++ + ++ L V+ R
Sbjct: 168 DFDVLPGREDTQRIAALLVEHARMTP-----------------RFIEYLLRHPQVRDARG 210
Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
S V + P+ + ++ L+ G+PV +A
Sbjct: 211 RSTVVVCSPEHLAADVFARLRAYGRPVVVAT 241
>gi|323140819|ref|ZP_08075734.1| iron-only hydrogenase maturation rSAM protein HydG
[Phascolarctobacterium sp. YIT 12067]
gi|322414701|gb|EFY05505.1| iron-only hydrogenase maturation rSAM protein HydG
[Phascolarctobacterium sp. YIT 12067]
Length = 471
Score = 35.9 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+L + C +C +C L+ + A + +Q+ +
Sbjct: 80 YGNRIVLFAPLYLSNYCINHCVYCPYHATNKHIGRKKLTQDEVRAEVIALQDMGHKRLAL 139
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
G DP+ + + +KT+ IKH
Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165
>gi|332186015|ref|ZP_08387761.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17]
gi|332013830|gb|EGI55889.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17]
Length = 339
Score = 35.9 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 26/166 (15%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C + CR+C +M + +LS + + + + +GG+PL+
Sbjct: 27 ISVTDRCDLRCRYCMAEQMTFLPRAKLLSLDEIAIIAERFIAR-GVTRIRLSGGEPLVRR 85
Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
+ +++ L + + + +R+ E L AG + + +++
Sbjct: 86 D--VADLVRRLGTHVGHGLDELTMTTNGTRL---------AEHADTLASAGIRRINVSLD 134
Query: 213 ANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
+ P F + I I +AG+++ V LKG+N+D
Sbjct: 135 SRDPERFRYITRHGDVGQVIHGILSARDAGLMIKINMVALKGLNED 180
>gi|322508770|gb|ADX04224.1| Molybdopterin biosynthesis, protein A [Acinetobacter baumannii
1656-2]
gi|323518373|gb|ADX92754.1| molybdenum cofactor biosynthesis protein [Acinetobacter baumannii
TCDC-AB0715]
Length = 346
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + ++ ++ I + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + + LK+AG + I++ + P
Sbjct: 86 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I G+ VL+K NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181
>gi|292656271|ref|YP_003536168.1| coenzyme PQQ synthesis protein E-like protein [Haloferax volcanii
DS2]
gi|291370056|gb|ADE02283.1| coenzyme PQQ synthesis protein E homolog [Haloferax volcanii DS2]
Length = 396
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
R P ++ ++ C + C C R + ++ L++ + + L +E V+
Sbjct: 40 TSRRPFVLIWEVTQACDLACDHC-RADATPARHPDELTTAEGKRLLDQAREFGPGQLVVL 98
Query: 150 TGGDPLILSH 159
+GGDPL S
Sbjct: 99 SGGDPLARSD 108
>gi|260554717|ref|ZP_05826938.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
ATCC 19606]
gi|260411259|gb|EEX04556.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
ATCC 19606]
Length = 346
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + ++ ++ I + TGG+PL+
Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 85
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + + LK+AG + I++ + P
Sbjct: 86 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I G+ VL+K NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181
>gi|304317387|ref|YP_003852532.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778889|gb|ADL69448.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 466
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVG 119
EE +L +D I + + + I + Y +RI+ L + + C CR+C +
Sbjct: 45 EEAAVLLNLDDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH-SN 103
Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
Q+ L+ + + ++E + G DP+ + V+KT+
Sbjct: 104 EQERKKLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155
>gi|225874701|ref|YP_002756160.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225792341|gb|ACO32431.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 398
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 40/189 (21%)
Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDT----EAA------LAYIQEKSQIWE 146
+ C CR+C+ R + ++ +AA L ++ +I
Sbjct: 76 VNPYRGCEFACRYCYARYTHEFLEMRDPAQFEREIYVKQQAAWLLRRDLHQVKAGEEI-- 133
Query: 147 VIFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
I T DP +R+ + +L+ L + +I + I + I LKE
Sbjct: 134 AIGTATDPYQPMERRMGVTRSLLEVLAEHRGYEI------GIVTKSALITRD-IDVLKEV 186
Query: 204 GKPVYIAIHAN------HPYEF------SEEAI-AAISRLANAGII--LLSQSVLLKGIN 248
+ + +H H + + RL AG++ +L+ S LL G+
Sbjct: 187 ARHNRLVLHVTITTPEVHLARILEPRAPRPDIRFETVRRLREAGLMAGILN-SPLLPGLT 245
Query: 249 DDPEILANL 257
D+ L +
Sbjct: 246 DNAAALHRM 254
>gi|31544373|ref|NP_852951.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
R(low)]
gi|31541217|gb|AAP56519.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
R(low)]
gi|284930415|gb|ADC30354.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
R(high)]
Length = 348
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 44/167 (26%)
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTGG 152
L L +C C FC F+RE++ K + + I+ Q + GG
Sbjct: 5 LYIHLPLCQKICTFCDFKRELI----DRHNPKKVVQDLIDEIERKQFSDEQFSSIYLGGG 60
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSR----VPIVDPQRINPELIQCLKE-----A 203
P + + L L ++ + ++ +P + Q LK+ A
Sbjct: 61 TPNVFDDELLDYFLSKIKK--------YAAKKCEFTIECNPDLVTKSQAQILKKNLVNRA 112
Query: 204 GKPVYIA----------IH-ANHPYEFSEEAIAAISRLANAGIILLS 239
+ I H NH YE A+ L +AGI ++
Sbjct: 113 SVGIQIVNNKILKYLNRTHDINHCYE-------AMQNLYDAGITNIN 152
>gi|119387052|ref|YP_918107.1| radical SAM domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119377647|gb|ABL72411.1| Radical SAM domain protein [Paracoccus denitrificans PD1222]
Length = 413
Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 12/72 (16%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--------KDTEAALAYIQEKSQIWEVI 148
+++K+ C + C +C+ G + + EA L I + ++
Sbjct: 11 LIVKVAERCNIACTYCY--FFFGGDESHKFHPPYVNEETAAEIEAFLDRITADGAVENLM 68
Query: 149 --FTGGDPLILS 158
F GG+P++
Sbjct: 69 IYFHGGEPMMAP 80
>gi|258511464|ref|YP_003184898.1| RNA modification enzyme, MiaB family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478190|gb|ACV58509.1| RNA modification enzyme, MiaB family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 497
Score = 35.9 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 73 EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
E D + P + + R + + + C +C +C + V S+
Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYC-----IVPYTRGVERSRLP 231
Query: 132 EAALAYIQE--KSQIWEVIFTG---GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
E L + E + ++ G D + L ++L+ + + V +RF +
Sbjct: 232 EDVLREVAELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNAVPGVGWIRFTTS-- 289
Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIH 212
+P ELI + E+ + V IH
Sbjct: 290 --NPWNFTDELIDAIAES-ENVVEHIH 313
>gi|118575403|ref|YP_875146.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A]
gi|118193924|gb|ABK76842.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A]
Length = 368
Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
+ I+L +VC C+FC G ++ L+ + EA + +E +I +V+ GG
Sbjct: 62 NNIILNYTNVCITDCKFCAFYRSPGHEEAYTLTLDEIEARVKTAREMFKITQVLIQGG-- 119
Query: 155 LILSHKRLQKVLKTLRYI 172
+L+ R I
Sbjct: 120 -HNPKLKLEYYEDAFRMI 136
>gi|114800325|ref|YP_762198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
15444]
gi|114740499|gb|ABI78624.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
15444]
Length = 425
Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 15/145 (10%)
Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
+ + + G+ R R +++ + C C FC G + + + A +
Sbjct: 125 SVRETAAHLIDGMEGR--ARAYVQVQNGCDHRCTFCIIP--YGRGNSRSVPAGEVVAQVR 180
Query: 137 YIQEKSQIWEVIFTGGD----PLILS-HKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ 190
+ +EV+ TG D L L +++ + + ++ LR S + ++
Sbjct: 181 ALAASGH-YEVVLTGVDLTSWGADLPGTPELGNLVQRILKLVPELRALRI-SSIDAIE-- 236
Query: 191 RINPELIQCLKEAGKPVYIAIHANH 215
++ LI+ L + Y+ + H
Sbjct: 237 -MDDALIEALADPRVAPYLHLSLQH 260
>gi|15889001|ref|NP_354682.1| molybdenum cofactor biosynthesis protein A [Agrobacterium
tumefaciens str. C58]
gi|24211986|sp|Q8UER0|MOAA_AGRT5 RecName: Full=Molybdenum cofactor biosynthesis protein A
gi|15156789|gb|AAK87467.1| molybdenum cofactor biosynthesis protein A [Agrobacterium
tumefaciens str. C58]
Length = 349
Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C M K +L+ ++ + + + ++ TGG+PL+
Sbjct: 34 VSVTDRCDFRCTYCMSEHMTFLPKKDLLTLEELDRLCSVFI-TRGVRKLRLTGGEPLV-- 90
Query: 159 HKRLQKVLKTLRYIKHVQ 176
K + +++ L HVQ
Sbjct: 91 RKNIMSLVRNLGR--HVQ 106
>gi|332873937|ref|ZP_08441877.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6014059]
gi|332737923|gb|EGJ68810.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
6014059]
Length = 344
Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + ++ ++ I + TGG+PL+
Sbjct: 27 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 83
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + + LK+AG + I++ + P
Sbjct: 84 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 139
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I G+ VL+K NDD
Sbjct: 140 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 179
>gi|314923123|gb|EFS86954.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL001PA1]
gi|314966890|gb|EFT10989.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL082PA2]
gi|314981234|gb|EFT25328.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL110PA3]
gi|315091802|gb|EFT63778.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL110PA4]
gi|315093189|gb|EFT65165.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL060PA1]
gi|315103305|gb|EFT75281.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL050PA2]
gi|315105512|gb|EFT77488.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL030PA1]
gi|327327714|gb|EGE69490.1| putative oxygen-independent coproporphyrinogen III oxidase
[Propionibacterium acnes HL103PA1]
Length = 397
Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149
+ + C C +C F ++ + + ++ E A + + + + F
Sbjct: 24 IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 83
Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
GG P +LS +L ++ I H++ L
Sbjct: 84 GGGTPTMLSPVQLGEL------IDHIRTL 106
>gi|331269245|ref|YP_004395737.1| Radical SAM domain-containing protein [Clostridium botulinum
BKT015925]
gi|329125795|gb|AEB75740.1| Radical SAM domain protein [Clostridium botulinum BKT015925]
Length = 456
Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158
>gi|253682419|ref|ZP_04863216.1| heme biosynthesis [Clostridium botulinum D str. 1873]
gi|253562131|gb|EES91583.1| heme biosynthesis [Clostridium botulinum D str. 1873]
Length = 456
Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158
>gi|118444426|ref|YP_877912.1| Heme biosynthesis [Clostridium novyi NT]
gi|118134882|gb|ABK61926.1| Heme biosynthesis [Clostridium novyi NT]
Length = 431
Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
L + H C + C++CF E V+S + + A+ ++ S EV GG+PL
Sbjct: 74 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 133
>gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
Length = 519
Score = 35.9 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%)
Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALA 136
I D + + + + + + CP C +C + G S A L
Sbjct: 177 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCT---FPAYAINGRQGSVDAFLAGLH 233
Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPI 186
Y ++E+ +I + + GG P ++ + ++ + + V +R + V
Sbjct: 234 YEMEAVGRFLRERGIRITTIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREIT-VEA 292
Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
P I PE ++ LK+ + I P + +E + AI R
Sbjct: 293 GRPDTITPEKLEVLKKWRIDRISIN-----PQSYIQETLKAIGR 331
>gi|239501595|ref|ZP_04660905.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
AB900]
Length = 343
Score = 35.9 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
+ + C C +C K +LS + ++ ++ I + TGG+PL+
Sbjct: 26 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 82
Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
+ + ++ L+ +K + + R + + + LK+AG + I++ + P
Sbjct: 83 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 138
Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
E + E + I G+ VL+K NDD
Sbjct: 139 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 178
>gi|307130560|ref|YP_003882576.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937]
gi|306528089|gb|ADM98019.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937]
Length = 329
Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 46/222 (20%)
Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTGG 152
L + VC C +C + + + +L I+ +V TGG
Sbjct: 18 LSITDVCNFRCTYC----LPDGYQPNGATPHRFL-SLDEIRRVGRAFADLGTEKVRLTGG 72
Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
+P L + ++ +R ++ L + R+ ++ +EAG + +
Sbjct: 73 EP-SLRRDFVD-IIAAIRENPAIRTL-----AVTTNGYRLARDVASW-REAGLT-ALNVS 123
Query: 213 ANH--PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTF 261
+ P +F + + + A + +VL++ IND +L
Sbjct: 124 VDSLDPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDINDS-----SLHTFL 178
Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
+R +P +G+++ + +SG
Sbjct: 179 DWIRTRP---IQLRFIELME-----TGDGREMFR--RHHVSG 210
>gi|258511959|ref|YP_003185393.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478685|gb|ACV59004.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 471
Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%)
Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
R LK+ C +C FC G + + +A ++ E++ T
Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198
Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
G D + RL +L L I +R S ++ I+ L+ L + K
Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250
Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232
V +H H + + E + L
Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLRELRR 288
>gi|218261905|ref|ZP_03476578.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
DSM 18315]
gi|218223699|gb|EEC96349.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
DSM 18315]
Length = 431
Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 95 DRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143
DR+L LK+ C C +C G + + ++ E + + ++
Sbjct: 128 DRVLTTPRHYAYLKIAEGCDRTCSYCAIPISTGRYQ--SIPMEEIEKEVRLLVKQGVKEF 185
Query: 144 ---IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
++ + G D + L ++++ + I V+ +R H P P +L++ +
Sbjct: 186 QVIAQDLTYYGLD--LYKRHALPELVERISDIPGVEWIRLHYGYPSHFPY----DLLRVM 239
Query: 201 KEA 203
+E
Sbjct: 240 RER 242
>gi|308068323|ref|YP_003869928.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681]
gi|305857602|gb|ADM69390.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681]
Length = 376
Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 18/122 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ + + H+C + C C +M+ ++ L + L + E + + TGG+P +
Sbjct: 36 VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92
Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212
L K + +V+ L + +R +IN L ++ K + + I
Sbjct: 93 L-DKTVDEVIVPLLKYAKERGVR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141
Query: 213 AN 214
N
Sbjct: 142 FN 143
>gi|269837718|ref|YP_003319946.1| hypothetical protein Sthe_1690 [Sphaerobacter thermophilus DSM
20745]
gi|269786981|gb|ACZ39124.1| protein of unknown function DUF512 [Sphaerobacter thermophilus DSM
20745]
Length = 470
Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 24/139 (17%)
Query: 194 PELIQCLKEAGKPVYIAIHANHPYEF------SEEAIAAI---SRLANAGIILLSQSVLL 244
+ + ++ P+ +++HA +P E + A + +RL GI +Q VL
Sbjct: 144 EDWQRIEEQRISPINVSVHATNP-ELRVALVGNPRAAQIMEDLARLERIGIDYNAQLVLC 202
Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------RLTIEEGQKIVASL 297
GIND PE + +R + L P+ L + G S F R+ + + SL
Sbjct: 203 PGINDGPE-MDRTIRDLISLG--PHLLSIAAVPVGLSKFGQERQSRRVRLSRTC--MRSL 257
Query: 298 KEKISGLCQPFYILDLPGG 316
+ L Y + G
Sbjct: 258 PGAL--LDIRRYTPEEAEG 274
>gi|227873762|ref|ZP_03991991.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268]
gi|227840378|gb|EEJ50779.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268]
Length = 512
Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
Y +RI+L + C C +C LS ++ + +Q+ +
Sbjct: 120 YGNRIVLFAPLYLSNYCVNGCVYCPYHAKNKDIARRKLSQEEIRKEVIALQDMGHKRLAL 179
Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
G DP+ + + + +KT+ I H
Sbjct: 180 EAGEDPVHNPIEYILESIKTIYSIHH 205
>gi|226940122|ref|YP_002795195.1| ChuW [Laribacter hongkongensis HLHK9]
gi|226715048|gb|ACO74186.1| ChuW [Laribacter hongkongensis HLHK9]
Length = 452
Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 94 PDRILLKL-LHVCPVYCRFC--FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVI 148
P+R L+ + + C +C FC +R + D EA A I V
Sbjct: 53 PERALVYVHIPFCANHCVFCGFYRNGWNAGLAEQYVDRLVADIEAEAARRPAGGSIAAVY 112
Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
GG P +L +L ++L+TLR
Sbjct: 113 LGGGTPTLLPAGQLTRLLQTLRR 135
>gi|225874258|ref|YP_002755717.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225791949|gb|ACO32039.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 226
Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 23/160 (14%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
+ L C + C +C G S + LA I+ + + V FTGG+PL
Sbjct: 21 CIFVRLAGCNLRCSWCDSEYTFTG--GEAFSDDEI---LARIEALAPVRLVEFTGGEPL- 74
Query: 157 LSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIH 212
L K+L ++ L + ++ R P +I EAGK + +
Sbjct: 75 LQAKQLIPFMERLLAAGYELMIETSGERPLREVPAAVHKIVDVKCPGSGEAGKFLMENLE 134
Query: 213 ANHPY-------------EFSEEAIAAISRLANAGIILLS 239
P EF+ E + A + AG ILLS
Sbjct: 135 FLTPRDEVKFVIADRADYEFAREFLRAHALDRKAGQILLS 174
>gi|258516358|ref|YP_003192580.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
DSM 771]
gi|257780063|gb|ACV63957.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
DSM 771]
Length = 435
Score = 35.9 bits (82), Expect = 10.0, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
R LK+ C +C +C R + Q VL+ ++ A + K + I TG
Sbjct: 145 RAYLKIQEGCRNFCSYCIIPYARGPLRSRQPEAVLNEAESLLAAGF---KEIVLTGIQTG 201
Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
+ L K L +++ L I + LR S ++P ++PELI+ + K
Sbjct: 202 AYGVDLPAKTSLAAIVEKLLRISGLSRLRLSS----IEPNDLSPELIELIL-HSKIFCPH 256
Query: 211 IHA 213
+H
Sbjct: 257 LHI 259
>gi|167644273|ref|YP_001681936.1| radical SAM domain-containing protein [Caulobacter sp. K31]
gi|167346703|gb|ABZ69438.1| Radical SAM domain protein [Caulobacter sp. K31]
Length = 481
Score = 35.9 bits (82), Expect = 10.0, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 47/179 (26%)
Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYI-QEKSQIWEVIFTGGD 153
+L++ C + C CF GS + E L I + + V +GG+
Sbjct: 113 AILEINEACNLTCPVCF----AGSSTSLDAHRPLAEVERMLDVIVASEGEPDLVQLSGGE 168
Query: 154 PLILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
P + + ++L R I+H+ I LR + L
Sbjct: 169 PTLHP--QFFEILSAARARPIRHLMINTNGLRIAREA----------GFAERLATYMPRF 216
Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQS---------------VLLKGINDD 250
+ + A+ +L A + + +Q+ L KG+NDD
Sbjct: 217 EVYLQF------DSLKRDALMQLRGADLVKVRTQALEALERNNIPTTLVVTLKKGVNDD 269
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.170 0.550
Lambda K H
0.267 0.0520 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,062,558,564
Number of Sequences: 14124377
Number of extensions: 416722348
Number of successful extensions: 1107036
Number of sequences better than 10.0: 4450
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 3541
Number of HSP's that attempted gapping in prelim test: 1097318
Number of HSP's gapped (non-prelim): 6662
length of query: 352
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 212
effective length of database: 2,865,380,850
effective search space: 607460740200
effective search space used: 607460740200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 82 (35.9 bits)