HHsearch alignment for GI: 254781066 and conserved domain: COG0016
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=99.39 E-value=4.8e-12 Score=90.76 Aligned_cols=115 Identities=21% Similarity=0.299 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCEECC-CCCCC-C------CCCEEEECCCCCCCCCCCCC--CCCHHHHHHHHHHHH--
Q ss_conf 999999999999879889847821056-89854-4------54124102478867832000--028589999898744--
Q gi|254781066|r 26 NMIQSSLREYFVENQFIEIDSMSLQYS-PGNET-H------IRAFSTELIIQDHIRKPLYL--QTSPEFSCKKLLAAG-- 93 (355)
Q Consensus 26 s~i~~~iR~ff~~~gF~EV~TPiL~~~-~~g~~-~------~~~f~t~~~~~~~~~~~~yL--~~SPql~lK~ll~~G-- 93 (355)
T Consensus 114 ~~~~e~i~~iF~~mGF~~~~gp~IE~d~~NFDaLn~P~dHPARdmq-DTFy~~~~~~~~lLRTHTs~vq~--R~l~~~~~ 190 (335)
T COG0016 114 TQTIEEIEDIFLGMGFTEVEGPEIETDFYNFDALNIPQDHPARDMQ-DTFYLKDDREKLLLRTHTSPVQA--RTLAENAK 190 (335)
T ss_pred HHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCC-CEEEECCCCCCEEECCCCCHHHH--HHHHHCCC
T ss_conf 9999999999997496664588213202252432499999841244-43787688773002366827659--99984799
Q ss_pred -HHHHHHHHHHHCCCCCCCCCCCCEEEECEEECC--CCHHHHHHHHHHHHHHH
Q ss_conf -688999886424567775448430020001157--76578777557888776
Q gi|254781066|r 94 -EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH--ESYEQLMKDCMNIIRCA 143 (355)
Q Consensus 94 -~~rvyqig~~FRaE~~~~rHlpEFtmLE~e~af--~d~~dlm~~~E~li~~~ 143 (355)
T Consensus 191 ~P~k~~~~grvyR~D~~DaTHs~~FhQiEGlvvd~~~s~~~Lkg~L~~f~~~~ 243 (335)
T COG0016 191 IPIKIFSPGRVYRNDTVDATHSPEFHQIEGLVVDKNISFADLKGTLEEFAKKF 243 (335)
T ss_pred CCCEEECCCCEECCCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99158456634117887764261013367899958956999999999999996