HHsearch alignment for GI: 254781066 and conserved domain: COG0016

>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis].
Probab=99.39  E-value=4.8e-12  Score=90.76  Aligned_cols=115  Identities=21%  Similarity=0.299  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCEECC-CCCCC-C------CCCEEEECCCCCCCCCCCCC--CCCHHHHHHHHHHHH--
Q ss_conf             999999999999879889847821056-89854-4------54124102478867832000--028589999898744--
Q gi|254781066|r   26 NMIQSSLREYFVENQFIEIDSMSLQYS-PGNET-H------IRAFSTELIIQDHIRKPLYL--QTSPEFSCKKLLAAG--   93 (355)
Q Consensus        26 s~i~~~iR~ff~~~gF~EV~TPiL~~~-~~g~~-~------~~~f~t~~~~~~~~~~~~yL--~~SPql~lK~ll~~G--   93 (355)
T Consensus       114 ~~~~e~i~~iF~~mGF~~~~gp~IE~d~~NFDaLn~P~dHPARdmq-DTFy~~~~~~~~lLRTHTs~vq~--R~l~~~~~  190 (335)
T COG0016         114 TQTIEEIEDIFLGMGFTEVEGPEIETDFYNFDALNIPQDHPARDMQ-DTFYLKDDREKLLLRTHTSPVQA--RTLAENAK  190 (335)
T ss_pred             HHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCC-CEEEECCCCCCEEECCCCCHHHH--HHHHHCCC
T ss_conf             9999999999997496664588213202252432499999841244-43787688773002366827659--99984799


Q ss_pred             -HHHHHHHHHHHCCCCCCCCCCCCEEEECEEECC--CCHHHHHHHHHHHHHHH
Q ss_conf             -688999886424567775448430020001157--76578777557888776
Q gi|254781066|r   94 -EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH--ESYEQLMKDCMNIIRCA  143 (355)
Q Consensus        94 -~~rvyqig~~FRaE~~~~rHlpEFtmLE~e~af--~d~~dlm~~~E~li~~~  143 (355)
T Consensus       191 ~P~k~~~~grvyR~D~~DaTHs~~FhQiEGlvvd~~~s~~~Lkg~L~~f~~~~  243 (335)
T COG0016         191 IPIKIFSPGRVYRNDTVDATHSPEFHQIEGLVVDKNISFADLKGTLEEFAKKF  243 (335)
T ss_pred             CCCEEECCCCEECCCCCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             99158456634117887764261013367899958956999999999999996