HHsearch alignment for GI: 254781066 and conserved domain: COG0172
>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=96.78 E-value=0.0016 Score=40.38 Aligned_cols=113 Identities=14% Similarity=0.170 Sum_probs=58.1
Q ss_pred HHHHHHHHHHCCCEEEECCCEECCC--CCCCCCCCEEEECCCCCCCCCCCCCCCCHH-----HHHHHHHHHH--HHHHHH
Q ss_conf 9999999998798898478210568--985445412410247886783200002858-----9999898744--688999
Q gi|254781066|r 29 QSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPE-----FSCKKLLAAG--EEKIFC 99 (355)
Q Consensus 29 ~~~iR~ff~~~gF~EV~TPiL~~~~--~g~~~~~~f~t~~~~~~~~~~~~yL~~SPq-----l~lK~ll~~G--~~rvyq 99 (355)
T Consensus 181 ~~f~ld~~~~~Gf~e~~~P~lv~~e~m~gtgqlpkf~e~~y~v~--~~~~~LipTaEvpl~~l~~~Eil~~~~LP~k~~~ 258 (429)
T COG0172 181 IQFMLDLHTKHGFTEVLPPYLVNLESMFGTGQLPKFEEDLYKVE--DPDLYLIPTAEVPLTNLHRDEILDEEDLPIKYTA 258 (429)
T ss_pred HHHHHHHHHHCCCEEEECCEEECHHHHHCCCCCCCCCCCCEEEC--CCCEEEEECCHHHHHHHHCCCCCCCCCCCEEEEE
T ss_conf 99999999876965865760605988622378988801215845--8987997020215678651620152127802678
Q ss_pred HHHHHCCC-CC---CCC---CCCCEEEECEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 88642456-77---754---48430020001157765787775578887766
Q gi|254781066|r 100 FAHAWRNG-EQ---GCL---HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144 (355)
Q Consensus 100 ig~~FRaE-~~---~~r---HlpEFtmLE~e~af~d~~dlm~~~E~li~~~~ 144 (355)
T Consensus 259 ~S~cFR~EAGs~GrdtrGliRvHQF~KVE~v-~~~~Pe~S~~~~E~m~~~ae 309 (429)
T COG0172 259 YSPCFRSEAGSAGKDTRGLIRVHQFDKVELV-VITKPEESEEELEEMLGNAE 309 (429)
T ss_pred ECHHHHCCCCCCCCCCCCEEEEEEEEEEEEE-EEECCCHHHHHHHHHHHHHH
T ss_conf 7725421456566435530146643558999-97070116999999999999