HHsearch alignment for GI: 254781066 and conserved domain: COG0441

Probab=97.78  E-value=7.2e-05  Score=48.27  Aligned_cols=114  Identities=18%  Similarity=0.240  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCEECCCC--CCCCCCCEEEECCCCCCCCCCCCCCCCH--HHHHHHHHHHH-----
Q ss_conf             99999999999999987988984782105689--8544541241024788678320000285--89999898744-----
Q gi|254781066|r   23 LKRNMIQSSLREYFVENQFIEIDSMSLQYSPG--NETHIRAFSTELIIQDHIRKPLYLQTSP--EFSCKKLLAAG-----   93 (355)
Q Consensus        23 ~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~~--g~~~~~~f~t~~~~~~~~~~~~yL~~SP--ql~lK~ll~~G-----   93 (355)
T Consensus       221 ~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~----------~y~e~mf~~~~~~~~~~lKpmNCpgh~~if  290 (589)
T COG0441         221 TIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWD----------NYKEDMFLTESDDREYALKPMNCPGHILIF  290 (589)
T ss_pred             CHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCHHCCCHH----------HCCCCCEEECCCCHHHEEEECCCHHHHHHH
T ss_conf             6999999999989875585271287363000010112045----------513660662137723306410787689998


Q ss_pred             ------H----HHHHHHHHHHCCCCCCC----CCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             ------6----88999886424567775----448430020001157765787775578887766641
Q gi|254781066|r   94 ------E----EKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA  147 (355)
Q Consensus        94 ------~----~rvyqig~~FRaE~~~~----rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~~~  147 (355)
T Consensus       291 k~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdD~-Hifc~~dQi~~E~~~~~~~i~~v~  357 (589)
T COG0441         291 KSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDA-HIFCTPDQIKDEFKGILELILEVY  357 (589)
T ss_pred             HCCCCCEECCCHHHHHCCEEECCCCCCHHHCCCCCCCEEECCC-CEECCHHHHHHHHHHHHHHHHHHH
T ss_conf             5378611004404331442211567642222400113224562-014046788999999999999999