HHsearch alignment for GI: 254781066 and conserved domain: PRK00252
>PRK00252 alaS alanyl-tRNA synthetase; Reviewed.
Probab=94.11 E-value=0.43 Score=25.95 Aligned_cols=99 Identities=20% Similarity=0.198 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999987988984782105689854454124102478867832000028589999898744688999886424
Q gi|254781066|r 26 NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105 (355)
Q Consensus 26 s~i~~~iR~ff~~~gF~EV~TPiL~~~~~g~~~~~~f~t~~~~~~~~~~~~yL~~SPql~lK~ll~~G~~rvyqig~~FR 105 (355)
T Consensus 5 ~eiR~~fl~fF~~k~H~~v~s~~lv--p~~Dptl-lf-tnAG-m~~f-k~~f~G~~~p~---------~~r~~~~QkCiR 69 (864)
T PRK00252 5 AEIRQAFLDFFESKGHTVVPSSSLV--PKNDPTL-LF-TNAG-MVQF-KDYFLGLEKPP---------YPRATTSQKCIR 69 (864)
T ss_pred HHHHHHHHHHHHHCCCEEECCCCCC--CCCCCCE-EE-EECC-CCCC-HHHHCCCCCCC---------CCCCCCCCCCEE
T ss_conf 9999999999987898880787725--5899804-67-5036-4016-22325887899---------997345403400
Q ss_pred CCCC-----CCCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5677-----754484300200011577657877755788877666
Q gi|254781066|r 106 NGEQ-----GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145 (355)
Q Consensus 106 aE~~-----~~rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~ 145 (355)
T Consensus 70 ~nDld~VG~t~rH~TfFEMlGN-~SfGdYf-----K~eai~~awe 108 (864)
T PRK00252 70 TNDLENVGYTARHHTFFEMLGN-FSFGDYF-----KKEAIEFAWE 108 (864)
T ss_pred CCCHHHCCCCCCCCHHHHCCCC-CCCCCCH-----HHHHHHHHHH
T ss_conf 3648763888775254423765-6655105-----8899999999