HHsearch alignment for GI: 254781066 and conserved domain: PRK03991
>PRK03991 threonyl-tRNA synthetase; Validated.
Probab=97.84 E-value=3.8e-05 Score=49.94 Aligned_cols=123 Identities=13% Similarity=0.167 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCEECC--CCCCCCCCCEEEECCCCCCCCCCCCCCCC--H---HHHHHHHHHHHHH
Q ss_conf 999999999999999879889847821056--89854454124102478867832000028--5---8999989874468
Q gi|254781066|r 23 LKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTELIIQDHIRKPLYLQTS--P---EFSCKKLLAAGEE 95 (355)
Q Consensus 23 ~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~--~~g~~~~~~f~t~~~~~~~~~~~~yL~~S--P---ql~lK~ll~~G~~ 95 (355)
T Consensus 228 ~i~~lle~Yv~~~~~~~G~~eV~TP~m~d~~~~~~sgH~~~f~e~my~~~~d~~~~~LrpmnCpgh~~i~~-~~~~SYRd 306 (613)
T PRK03991 228 LMKDLLEDYVYNLVKELGAMPVETPNMYDLSHPAIREHADKFGERQYRVKSDKKDLMLRFAACFGQFAMLK-DMTISYKN 306 (613)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCEEEEC-CCCCCHHH
T ss_conf 99999999999999863966845761640554025568876111342563276332304457863123510-24457432
Q ss_pred ---HHHHHHHH-HCCCCCCC----CCCCCEEEECEEECCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf ---89998864-24567775----4484300200011577-65787775578887766641
Q gi|254781066|r 96 ---KIFCFAHA-WRNGEQGC----LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVA 147 (355)
Q Consensus 96 ---rvyqig~~-FRaE~~~~----rHlpEFtmLE~e~af~-d~~dlm~~~E~li~~~~~~~ 147 (355)
T Consensus 307 LPlRl~E~g~~syR~E~SG~L~GL~RVR~FTqdDaH-IFC~~~dQi~~E~~~~~~li~~v~ 366 (613)
T PRK03991 307 LPLKMYELSDYSFRLEQRGELVGLKRLRAFTMPDMH-TLCKDMDEAMEEFEKQHKLILETG 366 (613)
T ss_pred CCHHHHHHCCCEEECCCCCCEECEEEEECCCCCCCE-ECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 646776522420212567744440133235668611-316877899999999999999999