HHsearch alignment for GI: 254781066 and conserved domain: PRK06462
>PRK06462 asparagine synthetase A; Reviewed.
Probab=100.00 E-value=0 Score=546.21 Aligned_cols=294 Identities=16% Similarity=0.136 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 48999999999999999999879889847821056898544541241024788678320000285899998987446889
Q gi|254781066|r 18 RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97 (355)
Q Consensus 18 ~R~~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~~g~~~~~~f~t~~~~~~~~~~~~yL~~SPql~lK~ll~~G~~rv 97 (355)
T Consensus 25 ~~~ifriRs~i~~~iR~f~~~~gF~EV~TPiL~~~~~~~~-~~~~~~~---~~~~~~~~~L~~Spql~lk~li~~g~~rV 100 (332)
T PRK06462 25 YSLVLKIQSSILRYTREFLDGRGFVEVLPPIISPSTDPLM-GDAKPAS---IDFYGVEYYLADSMIFHKQLMLRLLKGKV 100 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC-CCCCCCE---EECCCCCEEECCCHHHHHHHHHHCCCCCE
T ss_conf 9999999999999999999888999987972367788766-7760105---84489863314586999999986389977
Q ss_pred HHHHHHHCCCCCC---CCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCCE---E-CCCC-CCCCCCCCCCCCC
Q ss_conf 9988642456777---54484300200011577657877755788877666418830---0-0223-4332467732078
Q gi|254781066|r 98 FCFAHAWRNGEQG---CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---F-SFQN-VNCNPFSEPEYIT 169 (355)
Q Consensus 98 yqig~~FRaE~~~---~rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~i~ 169 (355)
T Consensus 101 feIg~~FR~E~~d~~t~rHlpEFt~lE~y~a~~d~~d~m~~~E~li~~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~ri~ 180 (332)
T PRK06462 101 FYLSPNFRLEPVDKDTGRHLYEFTQLDIEIEGADLEEVMSLAEDLIKYLVKELLREHSAELEFFLGRDLPEIKRPFKRIT 180 (332)
T ss_pred EEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
T ss_conf 99745231687776777654577765587873899999999999999999999986679999870777523598114546
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 88865666087653234555623279999999976887787653478987664300362237675443257688886413
Q gi|254781066|r 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249 (355)
Q Consensus 170 ~~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ie~~l~~~~pvfi~~yP~~~~pla 249 (355)
T Consensus 181 ~~eai~~l~~------------------------~~~~~~~~~~~~~~~e----~~l~~~~--~~P~fv~d~P~~~~Pfy 230 (332)
T PRK06462 181 HKEAIEILNE------------------------EGCSGEELEEIGSEGE----KSLSEHF--EEPVWIINIPKGSREFY 230 (332)
T ss_pred HHHHHHHHHH------------------------CCCCCCHHHHHHHHHH----HHHHHHH--CCCEEEECCHHHHCHHH
T ss_conf 9999999986------------------------2765660767545999----9999980--89789975625529586
Q ss_pred CCCCCCCCCCCCCEEEECCEECCCCCHHCCCHHHHHHHHHHHH-HHHHCCCCCCCHHHHHHHHHH-CCCC-CCCEEECCH
Q ss_conf 6787783633022022367122564021069999999999999-999728885301018999986-1889-632453159
Q gi|254781066|r 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLACL-TEMP-QSSGIAMGF 326 (355)
Q Consensus 250 k~~~~~~~va~rfdl~i~G~El~ng~~El~d~~~q~~rf~~q~-~~k~~~~~e~~~~D~~fl~al-~G~P-PhgG~glGi 326 (355)
T Consensus 231 ~~~~~~~~~~~~fdl~~-----~~g~~El~~g~~r~~~~~~l~~~~~~~g~~~~~~--~~yl~~~~~G~P~P~gG~GiGi 303 (332)
T PRK06462 231 DREDERPGVLRDYDLLL-----PEGIGEAVSGGEREYEYEEIVERIREHGVDPENY--KWYLEMAKEGYPLPTAGFGIGV 303 (332)
T ss_pred HCCCCCCCEEEECCHHH-----HCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHHHCCCCCCCEEEEHH
T ss_conf 64899988487536033-----0666222251767855999999999769997899--9999999828999987761489
Q ss_pred HHHHHHHHCCCCHHHHCCCCCCCCCC
Q ss_conf 99989981559713111585648743
Q gi|254781066|r 327 DRLVMLVTGANNINEVIWTPFSQSNQ 352 (355)
Q Consensus 327 dRLvm~l~g~~~Irdvi~FP~~r~~~ 352 (355)
T Consensus 304 DRLvm~l~~~~~Irdvi~FPR~pg~~ 329 (332)
T PRK06462 304 ERLTRYICGLRDIREVQPFPRVPGIV 329 (332)
T ss_pred HHHHHHHHCCCCHHEEEECCCCCCCC
T ss_conf 99999980898576174179998988