HHsearch alignment for GI: 254781066 and conserved domain: PRK12420

Probab=98.96  E-value=3.8e-09  Score=73.58  Aligned_cols=117  Identities=21%  Similarity=0.255  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCEECC------CCCCCCC--CCEEEECCCCCCCCCCCCCC---CCHHHHHHHH
Q ss_conf             99999999999999999879889847821056------8985445--41241024788678320000---2858999989
Q gi|254781066|r   21 FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNETHI--RAFSTELIIQDHIRKPLYLQ---TSPEFSCKKL   89 (355)
Q Consensus        21 ~l~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~------~~g~~~~--~~f~t~~~~~~~~~~~~yL~---~SPql~lK~l   89 (355)
T Consensus        17 e~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~~elf~~~~g~~~~i~kemy~----f~D~~gr~l~LRPe~Ta~-ia--R~   89 (421)
T PRK12420         17 EQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT----LQDQGKRDLALRYDLTIP-FA--KV   89 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCCHHHHHEEE----EECCCCCEEEECCCCCHH-HH--HH
T ss_conf             999999999999999998599472476501187642447884422411078----881899879856776589-99--99


Q ss_pred             HHHH--H---HHHHHHHHHHCCCCC--CCCCCCCEEEECEEECCCCHHHHHHHHH--HHHHHHHHHHC
Q ss_conf             8744--6---889998864245677--7544843002000115776578777557--88877666418
Q gi|254781066|r   90 LAAG--E---EKIFCFAHAWRNGEQ--GCLHQPEFTMLEWYRAHESYEQLMKDCM--NIIRCAAEVAN  148 (355)
Q Consensus        90 l~~G--~---~rvyqig~~FRaE~~--~~rHlpEFtmLE~e~af~d~~dlm~~~E--~li~~~~~~~~  148 (355)
T Consensus        90 ~a~~~~~~~P~k~~y~g~vfR~erpq~GR~--ReF~Q~GvEiiG~~~~--~aDaEiI~la~~~l~~lg  153 (421)
T PRK12420         90 VAMNPNIRLPFKRYEIGKVFRDGPIKQGRF--REFIQCDVDIVGVESV--MAEAELMSMAFELFRTLN  153 (421)
T ss_pred             HHHCCCCCCCEEEEEECCEEECCCCCCCCC--CEEEECCEEEECCCCH--HHHHHHHHHHHHHHHHCC
T ss_conf             997757778745888767785389878855--5134357542078877--889999999999999659