HHsearch alignment for GI: 254781066 and conserved domain: cd00645
>cd00645 AsnA Asparagine synthetase (aspartate-ammonia ligase) (AsnA) catalyses the conversion of L-aspartate to L-asparagine in the presence of ATP and ammonia. AsnA is a homodimeric enzyme which is structurally similiar to the catalytic core domain of class II aminoacyl-tRNA synthetases. Ammonia-dependent AsnA is not homologous to the glutamine-dependent asparagine synthetase AsnB.
Probab=98.35 E-value=2.6e-05 Score=50.91 Aligned_cols=262 Identities=16% Similarity=0.170 Sum_probs=122.1
Q ss_pred HHHHHHHHHH-----HCCCEEEECCCEECC-CC-CCC---CCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH-HH-HHHH
Q ss_conf 9999999999-----879889847821056-89-854---45412410247886783200002858999989-87-4468
Q gi|254781066|r 28 IQSSLREYFV-----ENQFIEIDSMSLQYS-PG-NET---HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL-LA-AGEE 95 (355)
Q Consensus 28 i~~~iR~ff~-----~~gF~EV~TPiL~~~-~~-g~~---~~~~f~t~~~~~~~~~~~~yL~~SPql~lK~l-l~-~G~~ 95 (355)
T Consensus 3 aI~~iK~~F~~~L~~~LnL~rVsAPLfv~~~sGlND~LnG~ErpV~F~i--k~~~~~~~EIVhSLAKW-KR~aL~~y~f~ 79 (309)
T cd00645 3 AIKFIKDFFQDNLAKELNLIRVSAPLFVEKGSGLNDNLNGVEKPVSFKV--KALPDATLEVVHSLAKW-KRLALARYGFS 79 (309)
T ss_pred HHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCCCCCCCEEECEEEEC--CCCCCCEEEEEEEHHHH-HHHHHHHCCCC
T ss_conf 4999999999999997392796666177079887768787460228635--78899726997135888-99999966998
Q ss_pred ---HHHHHHHHHCC-CCCCCCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCCE----ECCCCCCCCCCCCCCC
Q ss_conf ---89998864245-677754484300200011577657877755788877666418830----0022343324677320
Q gi|254781066|r 96 ---KIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI----FSFQNVNCNPFSEPEY 167 (355)
Q Consensus 96 ---rvyqig~~FRa-E~~~~rHlpEFtmLE~e~af~d~~dlm~~~E~li~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 167 (355)
T Consensus 80 ~geGlytdMnAiR~DE~ldn~HSiyVDQWDWEkvI~~~dRnl~~Lk~tV~~Iy~~ik~tE~~v~~~yp~l~~~Lp~~I~F 159 (309)
T cd00645 80 LGEGLYTDMNAIRPDEDLDNIHSIYVDQWDWEKVISKGERNLETLKETVNKIYKAIKETELEVNEKYPQLEPILPEEITF 159 (309)
T ss_pred CCCEECCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEE
T ss_conf 99430127762557755687612898500353427852258999999999999999999999999762034408886089
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 78888656660876532345556232799999999768877876534789876643003622376754432576888864
Q gi|254781066|r 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247 (355)
Q Consensus 168 i~~~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ie~~l~~~~pvfi~~yP~~~~p 247 (355)
T Consensus 160 itsqeL~~~YP~Lt-----------~keRE~~i~ke~-----------------------------gaVFi~~IG~---~ 196 (309)
T cd00645 160 ITSQELEDRYPDLT-----------PKEREDAICKEH-----------------------------GAVFIIGIGG---K 196 (309)
T ss_pred ECHHHHHHHCCCCC-----------HHHHHHHHHHHH-----------------------------CCEEEEECCC---C
T ss_conf 62899997777999-----------789999999972-----------------------------9399994488---5
Q ss_pred HC--CCCC----CCCCCCCCCEEEE------CCEECCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH-C
Q ss_conf 13--6787----7836330220223------67122564021069999999999999999728885301018999986-1
Q gi|254781066|r 248 LA--NIYP----ADPRFTKRFELYA------CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314 (355)
Q Consensus 248 la--k~~~----~~~~va~rfdl~i------~G~El~ng~~El~d~~~q~~rf~~q~~~k~~~~~e~~~~D~~fl~al-~ 314 (355)
T Consensus 197 L~~g~~Hd~RApDYDDW~LNGDilvw~~vl~~a~ElSSMGIRVd-----~~~L~~QL~~~~~~dr~~l~----~Hk~ll~ 267 (309)
T cd00645 197 LSDGKKHDGRAPDYDDWTLNGDILVWNPVLQRAFELSSMGIRVD-----EESLQKQLKLAGDEDRLELP----FHKMLLN 267 (309)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECHHCCCEEEEECCEEEEC-----HHHHHHHHHHCCCHHHHCCH----HHHHHHC
T ss_conf 78989566779998675447648997023073225634646888-----99999999975983543598----9999974
Q ss_pred C-CCCCCEEECCHHHHHHHHHCCCCHHHHCC
Q ss_conf 8-89632453159999899815597131115
Q gi|254781066|r 315 E-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344 (355)
Q Consensus 315 G-~PPhgG~glGidRLvm~l~g~~~Irdvi~ 344 (355)
T Consensus 268 ~~LP~TIGGGIGQSRlcM~lL~KaHIGEVQ~ 298 (309)
T cd00645 268 GELPQTIGGGIGQSRLCMFLLQKAHIGEVQA 298 (309)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 9998452376039999999975373223675