HHsearch alignment for GI: 254781066 and conserved domain: pfam00587
>pfam00587 tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T). Other tRNA synthetase sub-families are too dissimilar to be included. This domain is the core catalytic domain of tRNA synthetases and includes glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases.
Probab=98.82 E-value=1.6e-08 Score=69.86 Aligned_cols=119 Identities=19% Similarity=0.282 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCEECCC--CCCCCCCCEEEECCC-CCCCCCCCCCCCCHHHHHHHHHHH----HHH-
Q ss_conf 999999999999998798898478210568--985445412410247-886783200002858999989874----468-
Q gi|254781066|r 24 KRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELII-QDHIRKPLYLQTSPEFSCKKLLAA----GEE- 95 (355)
Q Consensus 24 ~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~~--~g~~~~~~f~t~~~~-~~~~~~~~yL~~SPql~lK~ll~~----G~~- 95 (355)
T Consensus 1 l~~~l~~~~~~~~~~~G~~~i~tP~l~~~~~~~~sg~~~~~~~~my~~~d~~~~~l~Lrp~~~~~~~~~~~~~~~~~~~l 80 (170)
T pfam00587 1 LRNALENFIRDLFKRYGYQEVDTPILEPKELWEGSGHWDDYFDEMYRFKDRGGEELYLRPTAEVGITRLFKNEILSYRDL 80 (170)
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCEEEEHHHHHHCCCCCCCHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
T ss_conf 97999999999999859989999917567898344776557531256735899768873257458889988620032358
Q ss_pred --HHHHHHHHHCCCCCCCC---CCCCEEEECEEECCCCHHHHHHHHHHHHHHH
Q ss_conf --89998864245677754---4843002000115776578777557888776
Q gi|254781066|r 96 --KIFCFAHAWRNGEQGCL---HQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143 (355)
Q Consensus 96 --rvyqig~~FRaE~~~~r---HlpEFtmLE~e~af~d~~dlm~~~E~li~~~ 143 (355)
T Consensus 81 P~r~~~~~~~fR~E~~~~~Gl~R~reF~q~d~~~~~~~-e~s~~~~~e~~~~~ 132 (170)
T pfam00587 81 PLKLYQIGPCFRYEARPRRGLGRVREFTQVDAEIFGTP-EQSEEEDEELLKLA 132 (170)
T ss_pred CCEEECCCCCCCCCCCCCCCCCEEEEEEEECEEEEECC-CHHHHHHHHHHHHH
T ss_conf 60133065300677776667743678898047999670-04299999999999