PSIBLAST alignment of GI: 254781066 and protein with PDB id: 1n9w
gi|30749602|pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus Length = 422
>gi|30749603|pdb|1N9W|B Chain B, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus Length = 422
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 109/363 (30%), Gaps = 54/363 (14%)
Query: 4 IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
IP + W N D R L + + R Y F EI + + +
Sbjct: 96 IPKEEWRANPDTLLEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRA 155
Query: 53 -PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQG 110
+ + D+ K YL SP+ K+++ E+++ A WR
Sbjct: 156 GAEGGSGL-------FGVDYFEKRAYLAQSPQLY-KQIMVGVFERVYEVAPVWRMEEHHT 207
Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
H E+ L+ E LM+ ++ E A + +
Sbjct: 208 SRHLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFP--- 264
Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
D P + ++ G V D S+ R+L E +
Sbjct: 265 ----------------QDIPRLTHAEAKRILKEELGYPVGQD--LSEEAERLLGEYAKER 306
Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
G + + RYP D T+ F+L +E+ + + E +
Sbjct: 307 WGSD-WLFVTRYPRSVRPFYTYPEED-GTTRSFDLLFRGLEITSGGQRIHRYEELLESLK 364
Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
K + E + +L MP G A+G +RL + G N+ P
Sbjct: 365 A-----KGMDPEAFH---GYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRD 416
Query: 349 QSN 351
+
Sbjct: 417 RHR 419