RPSBLAST alignment for GI: 254781066 and conserved domain: TIGR00457
>gnl|CDD|161887 TIGR00457, asnS, asparaginyl-tRNA synthetase. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, asnS, represents asparaginyl-tRNA synthetases from the three domains of life. Some species lack this enzyme and charge tRNA(asn) by misacylation with Asp, followed by transamidation of Asp to Asn. Length = 453
Score = 40.8 bits (96), Expect = 6e-04
Identities = 70/344 (20%), Positives = 117/344 (34%), Gaps = 59/344 (17%)
Query: 25 RNMIQSSLREYFVENQFIEIDS---MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
RN + ++ YF EN F + S E + QD K YL S
Sbjct: 139 RNALSQAIHRYFQENGFTWVSPPILTSNDCEGAGELFRVSTDGIDFSQDFFGKEAYLTVS 198
Query: 82 PEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
+ + A K++ F +R H EF M+E A + L++ +I
Sbjct: 199 GQLYLETYALA-LSKVYTFGPTFRAEKSNTSRHLSEFWMIEPEMAFANLNDLLQLAETLI 257
Query: 141 RCAAEVANQKIFSFQNV--NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL- 197
+ + + V NC S+ + + + DL L+N +
Sbjct: 258 K----------YIIKAVLENC---SQE-----LKFLEKNFDKDLIKRLENIINNKFARIT 299
Query: 198 YLQA----QQAGIRVAHDDTWSDIFS----RILIEKIEPNLGINCCTILDRYPAPESALA 249
Y A +++ ++D W D R L E+ + YP A
Sbjct: 300 YTDAIEILKESDKNFEYEDFWGDDLQTEHERFLAEEYFKPP-----VFVTNYPKDIKAFY 354
Query: 250 NIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
D + +L A I E+ E+ +K K++ +D D
Sbjct: 355 MKLNDDGKTVAAMDLLAPGIGEIIGGS-------EREDDLDKLENRMKEM-----GLDTD 402
Query: 309 FLACLTEMPQ-----SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
L ++ + SG +GF+RL+ +TG NI + I PF
Sbjct: 403 ALNWYLDLRKYGSVPHSGFGLGFERLLAYITGLENIRDAI--PF 444