RPSBLAST alignment for GI: 254781066 and conserved domain: KOG1885

>gnl|CDD|37096 KOG1885, KOG1885, KOG1885, Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis]. Length = 560
 Score =  162 bits (410), Expect = 2e-40
 Identities = 98/339 (28%), Positives = 157/339 (46%), Gaps = 19/339 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R     R  I S +R++     F+E+++  +    G  T  + F T     + +   LYL
Sbjct: 222 RDRFRIRAKIISYIRKFLDSRGFLEVETPMMNMIAGGAT-AKPFITH---HNDLDMDLYL 277

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + +PE   K L+  G ++++     +RN      H PEFT  E+Y A+  YE LM     
Sbjct: 278 RIAPELYLKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYEDLMDMTEE 337

Query: 139 IIR-CAAEVANQKIFSFQNVNCNP------FSEP-EYITVAEAFARYANIDL--GTTLDN 188
           ++      +      ++             F+ P   I + E   +   I L  G+TL  
Sbjct: 338 LLSGMVKNITGSYKITYHPNGPEEPELELDFTRPFRRIEMIEELEKELGIKLPPGSTLHT 397

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            +   R LL        +      T + +  +++ E +EP   +N   I+D +P   S L
Sbjct: 398 EE--TRELLKSLCVDEAVECPPPRTTARLLDKLVGEFLEPTC-VNPTFIID-HPQIMSPL 453

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A  + +    T+RFEL+    E+CNA  EL DP++QR RFE++ ++K    +E   +DED
Sbjct: 454 AKYHRSKAGLTERFELFIAGKEICNAYTELNDPVDQRQRFEQQARDKDAGDDEAQMVDED 513

Query: 309 FLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F   L   +P + G  MG DRLVML+T +NNI EV+  P
Sbjct: 514 FCTALEYGLPPTGGWGMGIDRLVMLLTDSNNIREVLLFP 552