RPSBLAST alignment for GI: 254781066 and conserved domain: KOG1885
>gnl|CDD|37096 KOG1885, KOG1885, KOG1885, Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis]. Length = 560
Score = 162 bits (410), Expect = 2e-40
Identities = 98/339 (28%), Positives = 157/339 (46%), Gaps = 19/339 (5%)
Query: 19 RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
R R I S +R++ F+E+++ + G T + F T + + LYL
Sbjct: 222 RDRFRIRAKIISYIRKFLDSRGFLEVETPMMNMIAGGAT-AKPFITH---HNDLDMDLYL 277
Query: 79 QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
+ +PE K L+ G ++++ +RN H PEFT E+Y A+ YE LM
Sbjct: 278 RIAPELYLKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYEDLMDMTEE 337
Query: 139 IIR-CAAEVANQKIFSFQNVNCNP------FSEP-EYITVAEAFARYANIDL--GTTLDN 188
++ + ++ F+ P I + E + I L G+TL
Sbjct: 338 LLSGMVKNITGSYKITYHPNGPEEPELELDFTRPFRRIEMIEELEKELGIKLPPGSTLHT 397
Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
+ R LL + T + + +++ E +EP +N I+D +P S L
Sbjct: 398 EE--TRELLKSLCVDEAVECPPPRTTARLLDKLVGEFLEPTC-VNPTFIID-HPQIMSPL 453
Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
A + + T+RFEL+ E+CNA EL DP++QR RFE++ ++K +E +DED
Sbjct: 454 AKYHRSKAGLTERFELFIAGKEICNAYTELNDPVDQRQRFEQQARDKDAGDDEAQMVDED 513
Query: 309 FLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
F L +P + G MG DRLVML+T +NNI EV+ P
Sbjct: 514 FCTALEYGLPPTGGWGMGIDRLVMLLTDSNNIREVLLFP 552