RPSBLAST alignment of GI: 254781066 and protein with PDBid: 1b8a

>1b8a_A Protein (aspartyl-tRNA synthetase); tRNA ligase,; HET: ATP; 1.90A {Pyrococcus kodakaraensis} SCOP: b.40.4.1 d.104.1.1 Length = 438

 Score = 88.5 bits (218), Expect = 2e-18
 Identities = 54/356 (15%), Positives = 109/356 (30%), Gaps = 47/356 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRN----------MIQSSLREYFVENQFIEIDSMSLQ 50
                 +     D     R   L+R            +  ++R++F EN FIEI +  + 
Sbjct: 106 PLDPTGKVKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKII 165

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
                        TEL    +  +  +L  SP+   + ++A+G ++++  A  +R  E  
Sbjct: 166 ------ATATEGGTELFPMKYFEEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAEEHN 219

Query: 111 --CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                   +++       E  E++M     ++  A     +      ++      EP   
Sbjct: 220 TTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEP--- 276

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                            L  P       L +     G  +   +       R+L + +  
Sbjct: 277 ----------------KLPFPRVSYDKALEI-LGDLGKEIPWGEDIDTEGERLLGKYMME 319

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           N       +       +      Y   P   + F+L    +E+ +             + 
Sbjct: 320 NENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQI 379

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +++    +          E +L      MP   G  +G +RL+  +    NI EVI
Sbjct: 380 KEKGLNPES--------FEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVI 427