RPSBLAST alignment of GI: 254781066 and protein with PDBid: 1n9w

>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 Length = 422
 Score = 99.8 bits (248), Expect = 7e-22
 Identities = 60/353 (16%), Positives = 108/353 (30%), Gaps = 59/353 (16%)

Query: 11  NRDFHYRRRPFLLKRNMIQ----------SSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N D     R   L+    +             R Y     F EI +  +  +        
Sbjct: 104 NPDTLLEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGL 163

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTM 119
                    D+  K  YL  SP+   K+++    E+++  A  WR        H  E+  
Sbjct: 164 FGV------DYFEKRAYLAQSPQL-YKQIMVGVFERVYEVAPVWRMEEHHTSRHLNEYLS 216

Query: 120 LEWYRAHESYEQLMKDCM-----NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           L+      + E+ +          ++  A   A  +I        +   +   +T AEA 
Sbjct: 217 LDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFPQDIPRLTHAEAK 276

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                   +  ++ G  V  D   S+   R+L E  +   G + 
Sbjct: 277 -----------------------RILKEELGYPVGQD--LSEEAERLLGEYAKERWGSDW 311

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              + RYP         YP +   T+ F+L    +E+ +    +    E     + +  +
Sbjct: 312 -LFVTRYPRSVRPF-YTYPEEDGTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGMD 369

Query: 295 KKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +            +L      MP   G A+G +RL   + G  N+      P
Sbjct: 370 PEA--------FHGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFP 414