RPSBLAST alignment of GI: 254781066 and protein with PDBid: 3dsq

>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288

 Score = 59.8 bits (144), Expect = 1e-09
 Identities = 32/268 (11%), Positives = 69/268 (25%), Gaps = 51/268 (19%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL---I 67
            +    + RP LL+   ++  L +   +  F+++ + ++                L   +
Sbjct: 62  EQLRTVKHRPALLE---LEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQV 118

Query: 68  IQDHIRKPLYLQTSPEF----SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +K L    +P         + L     +IF     +R   QG  H  EFTML   
Sbjct: 119 FWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLT 178

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                 E+  +   ++ R   E         +       +E   +          +++L 
Sbjct: 179 ELGTPLEERHQRLEDMARWVLEA-----AGIREF--ELVTESSVVYGDTVDVMKGDLELA 231

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +    P                                    ++    I    +   +  
Sbjct: 232 SGAMGP----------------------------------HFLDEKWEIFDPWVGLGFGL 257

Query: 244 PESALANIYPADPRFTKRFELYACNIEL 271
               +        +   R   Y   + L
Sbjct: 258 ERLLMIREGTQHVQSMARSLSYLDGVRL 285