RPSBLAST alignment of GI: 254781066 and protein with PDBid: 3g1z

>3g1z_A Putative lysyl-tRNA synthetase; drug target, nucleotide, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: AMP; 1.95A {Salmonella typhimurium} Length = 326
 Score =  166 bits (422), Expect = 5e-42
 Identities = 101/344 (29%), Positives = 160/344 (46%), Gaps = 26/344 (7%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
                W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T
Sbjct: 3   SETATWQPS---ASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFET 59

Query: 65  ELIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
             +   H +   LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEWY
Sbjct: 60  RFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWY 119

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R H    +LM +  ++++                        E ++  +AF R+  ID  
Sbjct: 120 RPHYDMYRLMNEVDDLLQ----------------QVLDCQPAESLSYQQAFQRHLEIDPL 163

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      +     L L           ++    +   +    +EP++G    T +  +PA
Sbjct: 164 SADKTQLREAAAKLDLSNIAD-----TEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPA 218

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++        
Sbjct: 219 SQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQ 278

Query: 304 PIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI   
Sbjct: 279 PIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFT 322