HHsearch alignment for GI: 254781067 and conserved domain: TIGR00038
>TIGR00038 efp translation elongation factor P; InterPro: IPR011768 Members of this family possess translation elongation factor activity. They have been shown to stimulate efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro, possibly indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (by similarity) . This family does not include members of IPR011897 from INTERPRO, an EFP-like protein of certain gammaproteobacteria.; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005737 cytoplasm.
Probab=100.00 E-value=0 Score=502.38 Aligned_cols=189 Identities=35% Similarity=0.620 Sum_probs=187.7
Q ss_pred CC-EEEHHHCCCCCEEEE-CCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEE
Q ss_conf 92-366432167758998-8937999998753688876389999998246871001342787200101056405789961
Q gi|254781067|r 1 MV-KVIASAVRKGNVLDV-DGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQD 78 (189)
Q Consensus 1 m~-~i~an~lk~G~~i~~-dg~~~~V~~~~~~kpgkg~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~d 78 (189)
T Consensus 1 MA~~~~s~d~r~Gl~i~~~~G~~~~VvE~~fvKpGkG~AfVR~Klk~L~tG~v~~~tFk~Gd~~e~~~i~~~~mqylYkD 80 (194)
T TIGR00038 1 MAEMISSNDFRKGLKILLIDGEPYRVVENEFVKPGKGQAFVRTKLKNLRTGAVVEKTFKAGDKVEQANIEEKTMQYLYKD 80 (194)
T ss_pred CCCEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEC
T ss_conf 97405520456885387229838999812457875666166766531358848999417668635416764334477706
Q ss_pred CCEEEEEECCCCCCCCCCHHH---HHHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEE
Q ss_conf 988999946887643211543---00133201378615689766777440158749999998285421310247700089
Q gi|254781067|r 79 QEGFHFMNPETYDQVTVSEEV---IGDQKVYFQEGMEVKLLIHEGVALSVEVPRHVVFTVIDTEPSSKGQTVTASYKPAI 155 (189)
Q Consensus 79 g~~~~FMd~etyeqi~i~~~~---ig~~~~fL~eg~~v~i~~~~~~~i~i~lP~~v~l~V~~t~p~~kG~t~~~~~K~A~ 155 (189)
T Consensus 81 gd~~vFMD~etyeQ~~~~~~~sanl~d~~kfl~e~~~v~v~~~~~~~l~v~lP~~V~levVetepg~KGDTa~~g~KpA~ 160 (194)
T TIGR00038 81 GDQYVFMDLETYEQISLDAKQSANLGDEAKFLLEEMEVSVVLYNDEILGVELPNLVELEVVETEPGVKGDTATGGTKPAT 160 (194)
T ss_pred CCEEEECCCCCHHHEECCCCCCCCCHHHHCCCCCCCEEEEEEECCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEE
T ss_conf 97688667886555311611154520110023566338999768948413078725789987588974663678604558
Q ss_pred EECCCEEECCCCCCCCCEEEEECCCCCEEHHCCC
Q ss_conf 9379599847401688799998899724021029
Q gi|254781067|r 156 LSNDIRTTVPPHINIGDDIVILTEDNSYVERVKK 189 (189)
Q Consensus 156 letG~~i~VP~FI~~Gd~IkV~T~~g~Y~~Rakk 189 (189)
T Consensus 161 L~TG~vV~VPlFv~~Gd~i~v~T~~geY~eR~k~ 194 (194)
T TIGR00038 161 LETGAVVKVPLFVNEGDKIKVNTRDGEYVERVKK 194 (194)
T ss_pred ECCCCEEECCEEEEECCEEEEECCCCCHHCCCCC
T ss_conf 6168688254054208889892577731100269