HHsearch alignment of GI: 254781067 and MMDB domain: 1bkb_A_1-71

>1bkb_A (A:1-71) Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum}
Probab=98.83  E-value=3.2e-08  Score=70.78  Aligned_cols=62  Identities=24%  Similarity=0.309  Sum_probs=59.3

Q ss_pred             EEHHHCCCCCEEEECCEEEEEEEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCEEEE
Q ss_conf             6643216775899889379999987536888-7638999999824687100134278720010
Q gi|254781067|r    4 VIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVERA   65 (189)
Q Consensus         4 i~an~lk~G~~i~~dg~~~~V~~~~~~kpgk-g~a~v~~klknL~tG~~~e~~f~~~ekve~~   65 (189)
                      +.+++||+|..+.++|.||+|+++..++||| |.|.+++.-.++.||++.+...+++++++.+
T Consensus         9 ~q~~~lkkg~yv~i~g~PCkIv~istsK~GKHG~AK~~iv~idIFtgkK~e~~~P~~~~~~VP   71 (71)
T 1bkb_A            9 VEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVP   71 (71)
T ss_dssp             EEGGGCCTTCEEEETTEEEEEEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTSEEEEC
T ss_pred             EEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEE
T ss_conf             998996468999999999999999998477677617999999823670777760576523201