HHsearch alignment of GI: 254781067 and MMDB domain: 1bkb_A_72-136

>1bkb_A (A:72-136) Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum}
Probab=97.32  E-value=0.00063  Score=44.45  Aligned_cols=57  Identities=16%  Similarity=0.216  Sum_probs=49.1

Q ss_pred             EECCCEEEEEEEECCEEEEEECCCCCCCCCCHHHHHH-HHHHCCCCCEEEEEEECCEE
Q ss_conf             1056405789961988999946887643211543001-33201378615689766777
Q gi|254781067|r   66 FVEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIGD-QKVYFQEGMEVKLLIHEGVA  122 (189)
Q Consensus        66 ~ie~~~~qylY~dg~~~~FMd~etyeqi~i~~~~ig~-~~~fL~eg~~v~i~~~~~~~  122 (189)
                      .++++..|.+-..|+..-+||+||||.|+++.+.+.+ ...-|.+|.+|.-+-.-|+-
T Consensus         1 IIekk~gQVisi~Gd~vQlMDletYeTfei~~~~i~ee~k~kl~~G~eVeY~e~mGk~   58 (65)
T 1bkb_A            1 IIEKFTAQILSVSGDVIQLXDXRDYKTIEVPXKYVEEEAKGRLAPGAEVEVWQILDRY   58 (65)
T ss_dssp             CCEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGBCHHHHTTCCTTCEEEEEEETTEE
T ss_pred             EEEEEEEEEEECCCCEEEEEECCCHHHEECCHHHHHHHHHHHCCCCCEEEEEEECCCE
T ss_conf             7987778998527976999646973415867345418999746599999999978929