HHsearch results for GI: 254781067 and protein with PDBid: 1iz6_A

>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii OT3} SCOP: b.34.5.2 b.40.4.5
Probab=100.00  E-value=9.1e-37  Score=244.69  Aligned_cols=124  Identities=22%  Similarity=0.317  Sum_probs=117.8

Q ss_pred             CEEEHHHCCCCCEEEECCEEEEEEEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECC
Q ss_conf             236643216775899889379999987536888-7638999999824687100134278720010105640578996198
Q gi|254781067|r    2 VKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQE   80 (189)
Q Consensus         2 ~~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgk-g~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~   80 (189)
                      ++|.||+||+|++|+++|+||+|++++|++||| |+|++|+++|||.||++.+.+|+++|+++.|+++++++||||.||+
T Consensus         5 ~~i~~~~lk~G~~i~~~g~p~~V~~~~~~kpGk~G~a~~~~k~knl~tG~~~e~~~~~~e~ve~~~v~~~~~qylY~d~~   84 (138)
T 1iz6_A            5 TKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPD   84 (138)
T ss_dssp             EEEEGGGCCTTSEEEETTEEEEEEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSEEEEECCEEEEEEEEEECSS
T ss_pred             EEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECCC
T ss_conf             69898897468999999999999999988698786418999999826796899998278842101476677799988599


Q ss_pred             EEEEEECCCCCCCCCCHH--HHHHHHHHCCCCCEEEEEEECCE--EEEE
Q ss_conf             899994688764321154--30013320137861568976677--7440
Q gi|254781067|r   81 GFHFMNPETYDQVTVSEE--VIGDQKVYFQEGMEVKLLIHEGV--ALSV  125 (189)
Q Consensus        81 ~~~FMd~etyeqi~i~~~--~ig~~~~fL~eg~~v~i~~~~~~--~i~i  125 (189)
                      .|+|||++||||++||.+  ++++...||+||++|++++|+|+  +|++
T Consensus        85 ~~~fMd~e~yEq~~l~~d~~l~~~~~~~l~eg~~V~v~~~~G~e~ii~~  133 (138)
T 1iz6_A           85 TVQIMDMETYETFEVPIDTGVADEIRDQLKEGINVEYWETLGRIKIMRI  133 (138)
T ss_dssp             EEEEECTTTCCEEEEEHHHHBCGGGTTTCCTTCEEEEEEETTEEEEEEE
T ss_pred             CEEEECCCCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEE
T ss_conf             3697169973013845623448999986249999999999998988999