HHsearch results for GI: 254781067 and protein with PDBid: 1yby_A
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=100.00 E-value=0 Score=484.88 Aligned_cols=186 Identities=32% Similarity=0.604 Sum_probs=184.7
Q ss_pred CEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECCE
Q ss_conf 23664321677589988937999998753688876389999998246871001342787200101056405789961988
Q gi|254781067|r 2 VKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQEG 81 (189)
Q Consensus 2 ~~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgkg~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~~ 81 (189)
||++|||||+|++|++||+||+|++++|+|||||+|++|+|||||.||+++++||+++|++|.|+++++++||||.||+.
T Consensus 30 ~mi~a~dlkkG~~I~~dg~py~Vl~~~~~kpGkg~A~vr~KlKnL~tG~~~e~tf~s~ekve~a~le~~~~qyLY~Dg~~ 109 (215)
T 1yby_A 30 LMISAGDFKNGVTFELDGQIFQVIEFQHVKPGKGAAFVRTKLKNIVTGATIEKTFNPTDKMPKAHIERKDMQYLYNDGDL 109 (215)
T ss_dssp -CEEGGGCCTTCEEEETTEEEEEEEEEEECCC--CCEEEEEEEETTTCCEEEEEECTTCEECBCCCEEEEEEEEEEETTE
T ss_pred EEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCEEECCEEEEEEEEEEECCCC
T ss_conf 34487876687899999999999998862499995289999998168983478974776110111343789999968998
Q ss_pred EEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCE
Q ss_conf 99994688764321154300133201378615689766777440158749999998285421310247700089937959
Q gi|254781067|r 82 FHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGVALSVEVPRHVVFTVIDTEPSSKGQTVTASYKPAILSNDIR 161 (189)
Q Consensus 82 ~~FMd~etyeqi~i~~~~ig~~~~fL~eg~~v~i~~~~~~~i~i~lP~~v~l~V~~t~p~~kG~t~~~~~K~A~letG~~ 161 (189)
|+|||++||||++++++++|++.+||+||++|++++|+|+||+|+||++|+|+|++|+|++||||+++++|||+||||++
T Consensus 110 ~~FMd~etyEQi~v~~d~ig~~~~~L~e~~~v~v~~~~~~~i~v~lP~~V~l~V~et~p~vKGdTas~~~K~A~LeTG~~ 189 (215)
T 1yby_A 110 YYFMDTETFEQLPLGKDKIGDALKFVKENEIVKVLSHKGNVFGIEPPNFVELEVTDTEPGFKGDTATGATKPAIVETGAS 189 (215)
T ss_dssp EEEECTTTCCEEEEEHHHHTTTTTTCCTTCEEEEEEETTEEEEEECCSEEEEEEEEC-------CCSCCEEEEEETTSCE
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCE
T ss_conf 89873877543233366641466521468507999926842100148739999998999655654678877489818999
Q ss_pred EECCCCCCCCCEEEEECCCCCEEHHC
Q ss_conf 98474016887999988997240210
Q gi|254781067|r 162 TTVPPHINIGDDIVILTEDNSYVERV 187 (189)
Q Consensus 162 i~VP~FI~~Gd~IkV~T~~g~Y~~Ra 187 (189)
|+||+||++||+|+|||++|+|++|+
T Consensus 190 v~VP~FI~~Gd~IkV~T~~g~Y~~RV 215 (215)
T 1yby_A 190 IKVPLFVNKGDIIRIDTRTGEYMERV 215 (215)
T ss_dssp EEEETTCCTTCEEEEETTTTEEEEEC
T ss_pred EEECCCCCCCCEEEEECCCCEEEECC
T ss_conf 98488327999999989987067059