HHsearch results for GI: 254781067 and protein with PDBid: 2eif_A
>2eif_A IF-5A, protein (eukaryotic translation initiation factor 5A); EIF-5A, OB-fold, structural genomics; 1.80A {Methanocaldococcus jannaschii DSM2661} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=100.00 E-value=5.9e-35 Score=233.58 Aligned_cols=122 Identities=20% Similarity=0.212 Sum_probs=116.0
Q ss_pred CEEEHHHCCCCCEEEECCEEEEEEEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECC
Q ss_conf 236643216775899889379999987536888-7638999999824687100134278720010105640578996198
Q gi|254781067|r 2 VKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQE 80 (189)
Q Consensus 2 ~~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgk-g~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~ 80 (189)
++|++|+||+|++|+++|+||+|++++|++||| |+|++|+++|||.||++.+.+|+++|++|.|+++++++||||.||+
T Consensus 9 ~~i~~~~lrkG~~i~~~g~p~~V~~~~~~k~GkrG~a~~~~k~knl~tG~~~e~~~~~~ekve~~~ie~~~~q~ly~d~~ 88 (136)
T 2eif_A 9 KQVNVGSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDRRKGQVLAIMGD 88 (136)
T ss_dssp EEEEGGGCCTTSEEEETTEEEEEEEEEECCCCSSSCCEEEEEEEESSSCCEEEEEEETTSEEEEECEEEEEEEEEEEETT
T ss_pred EEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEECCCEEEEEEEEEEECCC
T ss_conf 79869996568999999998999999998688886408999999936896999998189700035366653799997599
Q ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEC
Q ss_conf 8999946887643211543001332013786156897667774401
Q gi|254781067|r 81 GFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGVALSVE 126 (189)
Q Consensus 81 ~~~FMd~etyeqi~i~~~~ig~~~~fL~eg~~v~i~~~~~~~i~i~ 126 (189)
.|+|||+++|||++|| ++++..||+||++|++++++|+..-++
T Consensus 89 ~~~fMd~e~yeq~~l~---v~~~~~~l~eg~~v~v~~~~g~e~i~~ 131 (136)
T 2eif_A 89 MVQIMDLQTYETLELP---IPEGIEGLEPGGEVEYIEAVGQYKITR 131 (136)
T ss_dssp EEEEEETTTCCEEEEE---CCSCCTTCSTTCEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCEEEEEE---CCCHHHHCCCCCEEEEEEECCCEEEEE
T ss_conf 8999259995788836---751365334999899999999499999