HHsearch results for GI: 254781067 and protein with PDBid: 3a5z_B

>3a5z_B EF-P, elongation factor P; aminoacyl-tRNA synthetase paralog, translation, tRNA, lysyl- synthetase, structural genomics, NPPSFA; HET: KAA; 2.50A {Escherichia coli}
Probab=100.00  E-value=0  Score=487.96  Aligned_cols=188  Identities=34%  Similarity=0.570  Sum_probs=187.1

Q ss_pred             CCEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECC
Q ss_conf             92366432167758998893799999875368887638999999824687100134278720010105640578996198
Q gi|254781067|r    1 MVKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQE   80 (189)
Q Consensus         1 m~~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgkg~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~   80 (189)
                      |+++++|+||+|++|++||+||+|++++|+|||||+||+|+|||||.||+++++||+++|++|.|+++++++||||.||+
T Consensus         4 Ma~~~~~dlkkG~~I~~dg~~~~V~~~~~~kpgkg~A~v~~klknl~tG~~~e~tf~s~e~ve~a~~e~~~~qylY~dg~   83 (191)
T 3a5z_B            4 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGE   83 (191)
T ss_dssp             --CEESTTCCTTCEEEETTEEEEEEEEEEECCTTCCCEEEEEEEEGGGTEEEEEEEETTCEEEECCEEEECCEEEEECSS
T ss_pred             CCEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEEEEEECCC
T ss_conf             45002775678889999999999999997659999608999999956898789996699889787898778799998898


Q ss_pred             EEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCC
Q ss_conf             89999468876432115430013320137861568976677744015874999999828542131024770008993795
Q gi|254781067|r   81 GFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGVALSVEVPRHVVFTVIDTEPSSKGQTVTASYKPAILSNDI  160 (189)
Q Consensus        81 ~~~FMd~etyeqi~i~~~~ig~~~~fL~eg~~v~i~~~~~~~i~i~lP~~v~l~V~~t~p~~kG~t~~~~~K~A~letG~  160 (189)
                      .|+|||++||||++++++++|++.+||+||++|.++||+|+|++|+||++|+|+|++|+|++|||||++++|||+||||+
T Consensus        84 ~~~FMd~etyeQ~~l~~~~ig~~~~~l~e~~~v~i~~~~~~~i~v~lP~~V~l~V~~t~p~vkgdTa~~~~K~A~letG~  163 (191)
T 3a5z_B           84 FWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA  163 (191)
T ss_dssp             CEEEECTTTCCEEEECHHHHCTTTTTCCSSEECEEEEETTEEEEEECCSCCCCCCC------------------------
T ss_pred             CEEEECCCCCCCEEECHHHHCCHHHCCCCCCEEEEEECCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf             08998899955556026672612330257847999994684775137986999999999831331047887639991899


Q ss_pred             EEECCCCCCCCCEEEEECCCCCEEHHCC
Q ss_conf             9984740168879999889972402102
Q gi|254781067|r  161 RTTVPPHINIGDDIVILTEDNSYVERVK  188 (189)
Q Consensus       161 ~i~VP~FI~~Gd~IkV~T~~g~Y~~Rak  188 (189)
                      +|+||+||++||+|+||||+|+|++|||
T Consensus       164 ~v~VP~FI~~Gd~IkV~T~~g~Yv~R~K  191 (191)
T 3a5z_B          164 VVKVPLFVQIGEVIKVDTRSGEYVSRVK  191 (191)
T ss_dssp             ----------------------------
T ss_pred             EEEECCCCCCCCEEEEECCCCEEEHHCC
T ss_conf             9995983369999999899976700249