HHsearch results for GI: 254781067 and protein with PDBid: 3a5z_B
>3a5z_B EF-P, elongation factor P; aminoacyl-tRNA synthetase paralog, translation, tRNA, lysyl- synthetase, structural genomics, NPPSFA; HET: KAA; 2.50A {Escherichia coli}
Probab=100.00 E-value=0 Score=487.96 Aligned_cols=188 Identities=34% Similarity=0.570 Sum_probs=187.1
Q ss_pred CCEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECC
Q ss_conf 92366432167758998893799999875368887638999999824687100134278720010105640578996198
Q gi|254781067|r 1 MVKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQE 80 (189)
Q Consensus 1 m~~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgkg~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~ 80 (189)
|+++++|+||+|++|++||+||+|++++|+|||||+||+|+|||||.||+++++||+++|++|.|+++++++||||.||+
T Consensus 4 Ma~~~~~dlkkG~~I~~dg~~~~V~~~~~~kpgkg~A~v~~klknl~tG~~~e~tf~s~e~ve~a~~e~~~~qylY~dg~ 83 (191)
T 3a5z_B 4 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGE 83 (191)
T ss_dssp --CEESTTCCTTCEEEETTEEEEEEEEEEECCTTCCCEEEEEEEEGGGTEEEEEEEETTCEEEECCEEEECCEEEEECSS
T ss_pred CCEEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEEEEEECCC
T ss_conf 45002775678889999999999999997659999608999999956898789996699889787898778799998898
Q ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 89999468876432115430013320137861568976677744015874999999828542131024770008993795
Q gi|254781067|r 81 GFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGVALSVEVPRHVVFTVIDTEPSSKGQTVTASYKPAILSNDI 160 (189)
Q Consensus 81 ~~~FMd~etyeqi~i~~~~ig~~~~fL~eg~~v~i~~~~~~~i~i~lP~~v~l~V~~t~p~~kG~t~~~~~K~A~letG~ 160 (189)
.|+|||++||||++++++++|++.+||+||++|.++||+|+|++|+||++|+|+|++|+|++|||||++++|||+||||+
T Consensus 84 ~~~FMd~etyeQ~~l~~~~ig~~~~~l~e~~~v~i~~~~~~~i~v~lP~~V~l~V~~t~p~vkgdTa~~~~K~A~letG~ 163 (191)
T 3a5z_B 84 FWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA 163 (191)
T ss_dssp CEEEECTTTCCEEEECHHHHCTTTTTCCSSEECEEEEETTEEEEEECCSCCCCCCC------------------------
T ss_pred CEEEECCCCCCCEEECHHHHCCHHHCCCCCCEEEEEECCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf 08998899955556026672612330257847999994684775137986999999999831331047887639991899
Q ss_pred EEECCCCCCCCCEEEEECCCCCEEHHCC
Q ss_conf 9984740168879999889972402102
Q gi|254781067|r 161 RTTVPPHINIGDDIVILTEDNSYVERVK 188 (189)
Q Consensus 161 ~i~VP~FI~~Gd~IkV~T~~g~Y~~Rak 188 (189)
+|+||+||++||+|+||||+|+|++|||
T Consensus 164 ~v~VP~FI~~Gd~IkV~T~~g~Yv~R~K 191 (191)
T 3a5z_B 164 VVKVPLFVQIGEVIKVDTRSGEYVSRVK 191 (191)
T ss_dssp ----------------------------
T ss_pred EEEECCCCCCCCEEEEECCCCEEEHHCC
T ss_conf 9995983369999999899976700249