HHsearch results for GI: 254781067 and protein with PDBid: 3cpf_A
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, acetylation, alternative splicing; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=223.79 Aligned_cols=124 Identities=16% Similarity=0.257 Sum_probs=115.2
Q ss_pred EEEHHHCCCCCEEEECCEEEEEEEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECCE
Q ss_conf 36643216775899889379999987536888-76389999998246871001342787200101056405789961988
Q gi|254781067|r 3 KVIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQEG 81 (189)
Q Consensus 3 ~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgk-g~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~~ 81 (189)
.|.||+||+|++|+++|+||+|++++|++||| |+|++|+|+|||.||++++++|+++|++|.|+++++++||||.|++.
T Consensus 6 ~i~as~lkkG~~i~~~G~p~~V~~~~~~kpgk~G~a~v~~k~knl~tG~~~e~t~~~~d~ve~~~v~~~~~q~ly~d~~~ 85 (138)
T 3cpf_A 6 PMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGY 85 (138)
T ss_dssp EEEGGGCCTTSEEEETTEEEEEEEEEEECC----CCEEEEEEEETTTCCEEEEEEETTSEEEEECCEEEEEEEEEEETTE
T ss_pred EEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEEEEEECCCE
T ss_conf 87889976789999999999999999986867876699999999789999999856996998778998889999976997
Q ss_pred EEEEECCCC--CCCCCCHHHHHHHH-HHCCCCCEEEEEEE----CCEEEEEC
Q ss_conf 999946887--64321154300133-20137861568976----67774401
Q gi|254781067|r 82 FHFMNPETY--DQVTVSEEVIGDQK-VYFQEGMEVKLLIH----EGVALSVE 126 (189)
Q Consensus 82 ~~FMd~ety--eqi~i~~~~ig~~~-~fL~eg~~v~i~~~----~~~~i~i~ 126 (189)
|+|||+++| ||+.|+.+.+|+.. .||.||++|.+.++ ++.+|++.
T Consensus 86 ~~fMd~~~~~~e~i~l~~~~l~~~i~~~~~eg~~v~V~vi~~~g~e~vi~v~ 137 (138)
T 3cpf_A 86 LSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 137 (138)
T ss_dssp EEEECTTSCEECCSBCCSHHHHHHHHHHHHHTCCCEEEEEEETTEEEEEEEC
T ss_pred EEEEECCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEE
T ss_conf 9998169863589865878978999998648998999999018929999960