HHsearch results for GI: 254781067 and protein with PDBid: 3hks_A
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=99.98 E-value=8.3e-32 Score=214.30 Aligned_cols=123 Identities=15% Similarity=0.248 Sum_probs=111.9
Q ss_pred EEEHHHCCCCCEEEECCEEEEEEEEEEECCCC-CCCEEEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECCE
Q ss_conf 36643216775899889379999987536888-76389999998246871001342787200101056405789961988
Q gi|254781067|r 3 KVIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVERAFVEDQRFQFLYQDQEG 81 (189)
Q Consensus 3 ~i~an~lk~G~~i~~dg~~~~V~~~~~~kpgk-g~a~v~~klknL~tG~~~e~~f~~~ekve~~~ie~~~~qylY~dg~~ 81 (189)
.+.|++||+|++|+++|+||+|++++|++||| |+|++|+++|||.||++++.+|+++++++.|.++++++||||.|++.
T Consensus 28 ~i~as~lkkG~~i~idg~pc~V~~~~~skpGKhG~A~~rik~kdi~tG~~~e~t~~s~d~ve~~~v~~~~~Q~ly~d~~~ 107 (167)
T 3hks_A 28 PQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDG 107 (167)
T ss_dssp EEEGGGCCTTSEEEETTEEEEEEEEEEECSSTTCCCEEEEEEEETTTCCEEEEEEETTSEEEEECCEEEEEEEEEECTTS
T ss_pred EEEHHHCCCCCEEEECCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEEEEEEEEEEEECCCC
T ss_conf 67889966788999999999999999867877755179999997147957899704763001467898899999987897
Q ss_pred EEEEECCCCC---CCCC--CHHHHHHHHHHCCCCCEEEEEEECC----EEEEE
Q ss_conf 9999468876---4321--1543001332013786156897667----77440
Q gi|254781067|r 82 FHFMNPETYD---QVTV--SEEVIGDQKVYFQEGMEVKLLIHEG----VALSV 125 (189)
Q Consensus 82 ~~FMd~etye---qi~i--~~~~ig~~~~fL~eg~~v~i~~~~~----~~i~i 125 (189)
|+|||+++|| |+.| +.+++++...||.||++|.|.+|+. .++++
T Consensus 108 ~~fMd~e~~et~E~i~l~~~~~l~~~~~~~l~eG~ev~V~~~~~mG~e~ii~v 160 (167)
T 3hks_A 108 FVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAV 160 (167)
T ss_dssp BEEEECTTSCEECCCBCCSCHHHHHHHHHHHHTTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEE
T ss_conf 39999079808887614773157899998875899899999916996999999