HHSEARCH alignment of GI: 254781067 and SCOP domain: d2eifa2

Alignment
>d2eifa2 b.40.4.5 (A:74-132) C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.94  E-value=0.00081  Score=41.41  Aligned_cols=52  Identities=17%  Similarity=0.236  Sum_probs=42.2

Q ss_pred             ECCCEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCE
Q ss_conf             0564057899619889999468876432115430013320137861568976677
Q gi|254781067|r   67 VEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGV  121 (189)
Q Consensus        67 ie~~~~qylY~dg~~~~FMd~etyeqi~i~~~~ig~~~~fL~eg~~v~i~~~~~~  121 (189)
                      ++++.+|.+...|+..+.||++|||.++++..  ++..+ |.+|.+|.-.-.-|+
T Consensus         1 IeKk~aQVlsi~G~~vq~MD~etyetf~l~ip--e~~~~-l~~G~eVeY~e~mGr   52 (59)
T d2eifa2           1 IDRRKGQVLAIMGDMVQIMDLQTYETLELPIP--EGIEG-LEPGGEVEYIEAVGQ   52 (59)
T ss_dssp             EEEEEEEEEEEETTEEEEEETTTCCEEEEECC--SCCTT-CSTTCEEEEEEETTE
T ss_pred             CCCCEEEEEEECCCEEEEEECCCCEEEEEECC--CHHCC-CCCCCEEEEEECCCC
T ss_conf             96531589997588489850776102787576--14404-789987998620694


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a)
species: Archaeon Methanococcus jannaschii [TaxId: 2190]