RPSBLAST alignment for GI: 254781067 and conserved domain: TIGR00038
>gnl|CDD|161673 TIGR00038, efp, translation elongation factor P. function: involved in peptide bond synthesis. stimulate efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (by similarity). The trusted cutoff of this model is set high enough to exclude members of TIGR02178, an EFP-like protein of certain Gammaproteobacteria. Length = 184
Score = 219 bits (560), Expect = 5e-58
Identities = 65/182 (35%), Positives = 108/182 (59%)
Query: 6 ASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTPITQVEMRRISDGVKVSNRWRTTEQVERA 65
A+ +RKG V+++DG+ Y+VL ++ PGKG +V+++ + G + +R+ E+VE+A
Sbjct: 3 ANDLRKGLVIELDGEPYVVLEFEHVKPGKGQAFVRVKLKNLLTGKVLEKTFRSGEKVEKA 62
Query: 66 FVEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIGDQKVYFQEGMEVKLLIHEGVALSV 125
VE++ Q+LY+D + + FM+ ETY+Q+ + ++++GD + +E MEV + + G + V
Sbjct: 63 DVEEREMQYLYKDGDSYVFMDTETYEQIELPKDLLGDAAKFLKENMEVSVTFYNGEPIGV 122
Query: 126 EVPRHVVFTVIDTEPSSKGQTVTASYKPAILSNDIRTTVPPHINIGDDIVILTEDNSYVE 185
E+P V V +TEP KG T + KPA L VP I G+ I + T YVE
Sbjct: 123 ELPNFVELEVTETEPGVKGDTASGGTKPATLETGAVVQVPLFIEEGEKIKVDTRTGEYVE 182
Query: 186 RV 187
R
Sbjct: 183 RA 184