RPSBLAST alignment of GI: 254781067 and protein with PDBid: 1bkb
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5 Length = 136
Score = 89.6 bits (222), Expect = 4e-19
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 6 ASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTTEQVER 64
A +++G+ + +DG+ V+ + GK G+ ++ + DG K + QVE
Sbjct: 11 AGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEV 70
Query: 65 AFVEDQRFQFLYQDQEGFHFMNPETYDQVTVSEEVIGDQ-KVYFQEGMEVKLLIHEG 120
+E Q L + M+ Y + V + + ++ K G EV++
Sbjct: 71 PIIEKFTAQILSVSGDVIQLMDMRDYKTIEVPMKYVEEEAKGRLAPGAEVEVWQILD 127