RPSBLAST alignment of GI: 254781067 and protein with PDBid: 1iz6
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii OT3} SCOP: b.34.5.2 b.40.4.5 Length = 138
Score = 98.1 bits (244), Expect = 1e-21
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 1 MVKVIASAVRKGNVLDVDGKLYIVLVAKNFHPGK-GTPITQVEMRRISDGVKVSNRWRTT 59
KV S ++ G + +D + ++ PGK G+ ++E I DG S T+
Sbjct: 4 KTKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTS 63
Query: 60 EQVERAFVEDQRFQFLYQDQEGFHFMNPETYDQVTVS--EEVIGDQKVYFQEGMEVKLLI 117
+V+ ++ + Q + + M+ ETY+ V V + + +EG+ V+
Sbjct: 64 AEVDVPIIDKKTAQVIAITPDTVQIMDMETYETFEVPIDTGVADEIRDQLKEGINVEYWE 123
Query: 118 HEG 120
G
Sbjct: 124 TLG 126