RPSBLAST alignment of GI: 254781067 and protein with PDBid: 3cpf
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, acetylation, alternative splicing; 2.50A {Homo sapiens} Length = 138
Score = 78.1 bits (192), Expect = 1e-15
Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Query: 6 ASAVRKGNVLDVDGKLYIVLVAKNFHPGKGTP-ITQVEMRRISDGVKVSNRWRTTEQVER 64
SA+RK + + G+ ++ GK + I G K + +T ++
Sbjct: 9 CSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDV 68
Query: 65 AFVEDQRFQFLYQDQEGFHFMNPETY--DQVTVSEEVIGDQ-KVYFQEGMEVKLLI 117
++ FQ + + + + + E +G + + + G E+ + +
Sbjct: 69 PNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITV 124