Query gi|254781068|ref|YP_003065481.1| hypothetical protein CLIBASIA_04850 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 43
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed Jun 1 21:04:20 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781068.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2a8j_A Taspase 1, threonine a 14.9 23 0.00068 18.2 -1.2 10 32-41 133-142 (420)
2 >2gez_A L-asparaginase alpha s 14.2 25 0.00073 18.0 -1.2 12 32-43 29-40 (69)
3 >1k2x_A Putative L-asparaginas 12.2 30 0.0009 17.6 -1.3 12 31-42 27-38 (68)
4 >2ptz_A Enolase; lyase, glycol 11.5 66 0.0019 16.0 0.3 17 23-39 2-18 (39)
5 >1apy_A Aspartylglucosaminidas 11.3 33 0.00099 17.4 -1.3 12 32-43 82-93 (121)
6 >3ikw_A Heparin lyase I; polys 9.8 1.7E+02 0.0052 13.9 3.6 26 1-26 151-176 (304)
7 >2gom_A Fibrinogen-binding pro 9.3 26 0.00076 17.9 -2.4 21 19-39 35-55 (61)
8 >2fgy_A Carboxysome shell poly 8.6 1.5E+02 0.0046 14.2 1.3 13 16-28 58-70 (122)
9 >1xdp_A Polyphosphate kinase; 7.5 1.5E+02 0.0044 14.3 0.8 19 9-27 144-162 (206)
10 >2psb_A YERB protein; structur 7.4 2.3E+02 0.0067 13.4 2.7 34 5-38 13-46 (77)
No 1
>>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A (A:)
Probab=14.85 E-value=23 Score=18.17 Aligned_cols=10 Identities=40% Similarity=0.743 Sum_probs=5.8
Q ss_pred HHCCCCCCEE
Q ss_conf 3203682020
Q gi|254781068|r 32 QRNIKNPIQL 41 (43)
Q Consensus 32 qrniknpiql 41 (43)
-++|||||+|
T Consensus 133 v~~vkNPI~l 142 (420)
T 2a8j_A 133 LSGIKNPVSV 142 (420)
T ss_dssp ECSBSCHHHH
T ss_pred CCCCCCHHHH
T ss_conf 4577888999
No 2
>>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding; 2.60A {Lupinus luteus} (A:74-142)
Probab=14.23 E-value=25 Score=18.01 Aligned_cols=12 Identities=42% Similarity=0.667 Sum_probs=8.9
Q ss_pred HHCCCCCCEECC
Q ss_conf 320368202059
Q gi|254781068|r 32 QRNIKNPIQLER 43 (43)
Q Consensus 32 qrniknpiqler 43 (43)
-+++||||++-|
T Consensus 29 v~~v~nPi~~Ar 40 (69)
T 2gez_A 29 LSTVLNPISLAR 40 (69)
T ss_dssp ESSBSCHHHHHH
T ss_pred CCCCCCHHHHHH
T ss_conf 676587899999
No 3
>>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis; HET: CME; 1.65A {Escherichia coli} (A:72-139)
Probab=12.20 E-value=30 Score=17.59 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=8.9
Q ss_pred HHHCCCCCCEEC
Q ss_conf 332036820205
Q gi|254781068|r 31 YQRNIKNPIQLE 42 (43)
Q Consensus 31 yqrniknpiqle 42 (43)
--++++|||.+-
T Consensus 27 ~v~~v~nPi~vA 38 (68)
T 1k2x_A 27 GVSHLRNPVLAA 38 (68)
T ss_dssp EESSCSCHHHHH
T ss_pred ECCCCCCHHHHH
T ss_conf 515556789999
No 4
>>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} (A:251-289)
Probab=11.51 E-value=66 Score=15.99 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=14.5
Q ss_pred EECCCHHHHHHCCCCCC
Q ss_conf 51110113332036820
Q gi|254781068|r 23 DYDFKKKSYQRNIKNPI 39 (43)
Q Consensus 23 dydfkkksyqrniknpi 39 (43)
.||-+||.|.-..|||-
T Consensus 2 ~yd~~kk~ynltfk~pe 18 (39)
T 2ptz_A 2 TYDEKKQQYNLTFKSPE 18 (39)
T ss_dssp GEETTTTEEETTTTSSS
T ss_pred HCCCCCCCCCCCCCCCC
T ss_conf 50055552034212133
No 5
>>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} (A:1-121)
Probab=11.27 E-value=33 Score=17.39 Aligned_cols=12 Identities=50% Similarity=0.673 Sum_probs=8.8
Q ss_pred HHCCCCCCEECC
Q ss_conf 320368202059
Q gi|254781068|r 32 QRNIKNPIQLER 43 (43)
Q Consensus 32 qrniknpiqler 43 (43)
-++|||||++-|
T Consensus 82 v~~v~nPI~vAr 93 (121)
T 1apy_A 82 LRRIKNAIGVAR 93 (121)
T ss_dssp ECSCSCHHHHHH
T ss_pred CCCCCCHHHHHH
T ss_conf 675679899999
No 6
>>3ikw_A Heparin lyase I; polysaccharide lyase, beta-jelly roll; 1.30A {Bacteroides thetaiotaomicron} PDB: 3ilr_A* 3imn_A 3in9_A* 3ina_A* (A:1-153,A:224-374)
Probab=9.84 E-value=1.7e+02 Score=13.95 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=20.3
Q ss_pred CCCCCCEEEEEECCCCCCEEEEEECC
Q ss_conf 98778458998054112089975111
Q gi|254781068|r 1 MDSSSPIALAIQNRQIGGVVRFDYDF 26 (43)
Q Consensus 1 mdssspialaiqnrqiggvvrfdydf 26 (43)
|-+|.|+||.+|.-.+---+|.|..-
T Consensus 151 ~p~sPPLAl~lqGg~~~I~~r~d~~~ 176 (304)
T 3ikw_A 151 MPDYPPLAFGFSGGLFYIKANSDRKW 176 (304)
T ss_dssp CCCCCSEEEEEETTEEEEEEEEECCS
T ss_pred CCCCCCEEEECCCCEEEEEECCCHHH
T ss_conf 99999526611585699995571332
No 7
>>2gom_A Fibrinogen-binding protein; three-helix closed bundle with LEFT-hand twist, cell adhesion/toxin complex; 1.25A {Staphylococcus aureus} (A:)
Probab=9.34 E-value=26 Score=17.95 Aligned_cols=21 Identities=38% Similarity=0.632 Sum_probs=17.3
Q ss_pred EEEEEECCCHHHHHHCCCCCC
Q ss_conf 899751110113332036820
Q gi|254781068|r 19 VVRFDYDFKKKSYQRNIKNPI 39 (43)
Q Consensus 19 vvrfdydfkkksyqrniknpi 39 (43)
.+.|.|.++|+..||.|.|-.
T Consensus 35 Li~F~~~~~K~~LQ~~ID~VL 55 (61)
T 2gom_A 35 LVSFEYKVKKMVLQERIDNVL 55 (61)
T ss_dssp HSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 777898999999999999999
No 8
>>2fgy_A Carboxysome shell polypeptide; beta class of carbonic anhydrase, lyase; 2.20A {Halothiobacillus neapolitanus} (A:421-542)
Probab=8.65 E-value=1.5e+02 Score=14.20 Aligned_cols=13 Identities=23% Similarity=0.368 Sum_probs=8.9
Q ss_pred CCCEEEEEECCCH
Q ss_conf 1208997511101
Q gi|254781068|r 16 IGGVVRFDYDFKK 28 (43)
Q Consensus 16 iggvvrfdydfkk 28 (43)
|--+|||+||-+-
T Consensus 58 iPV~v~f~Yd~rV 70 (122)
T 2fgy_A 58 IPIAIHYRYDPNV 70 (122)
T ss_dssp EEEEEEEEECTTS
T ss_pred CCEEEEEECCCCC
T ss_conf 4179985047879
No 9
>>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} (A:105-310)
Probab=7.51 E-value=1.5e+02 Score=14.28 Aligned_cols=19 Identities=26% Similarity=0.398 Sum_probs=14.5
Q ss_pred EEEECCCCCCEEEEEECCC
Q ss_conf 9980541120899751110
Q gi|254781068|r 9 LAIQNRQIGGVVRFDYDFK 27 (43)
Q Consensus 9 laiqnrqiggvvrfdydfk 27 (43)
-.+..|+.|-+||+.|+-.
T Consensus 144 ~~Lk~Rr~g~~VRLe~~~~ 162 (206)
T 1xdp_A 144 SSLKQRLTAEPVRFVYQRD 162 (206)
T ss_dssp TTSSTTTSCCCEEEEECTT
T ss_pred HHHHHHHHCCCEEEEECCC
T ss_conf 9999864054036663367
No 10
>>2psb_A YERB protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, unknown function; 2.10A {Bacillus subtilis} (A:170-227,A:302-320)
Probab=7.41 E-value=2.3e+02 Score=13.41 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=24.2
Q ss_pred CCEEEEEECCCCCCEEEEEECCCHHHHHHCCCCC
Q ss_conf 8458998054112089975111011333203682
Q gi|254781068|r 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNP 38 (43)
Q Consensus 5 spialaiqnrqiggvvrfdydfkkksyqrniknp 38 (43)
-.|.+..-...+-..|.++||-|-..|.|.-..-
T Consensus 13 YniR~DYGT~nvTN~VEY~YDKKae~YtRsSDGV 46 (77)
T 2psb_A 13 YNVRVDYGTNNVTNLVEYNYDKKAEFYTRSSDGV 46 (77)
T ss_dssp CEEEEECCCSSCCCEEEEEEETTTTEEEEEETTE
T ss_pred EEEEEEEEECCCCEEEEEEECCCCCEEEECCCCC
T ss_conf 0389997621332146778647677588714883
Done!