BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781068|ref|YP_003065481.1| hypothetical protein
CLIBASIA_04850 [Candidatus Liberibacter asiaticus str. psy62]
(43 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781068|ref|YP_003065481.1| hypothetical protein CLIBASIA_04850 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040745|gb|ACT57541.1| hypothetical protein CLIBASIA_04850 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 43
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/43 (100%), Positives = 43/43 (100%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER
Sbjct: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
>gi|54294135|ref|YP_126550.1| hypothetical protein lpl1199 [Legionella pneumophila str. Lens]
gi|53753967|emb|CAH15438.1| hypothetical protein lpl1199 [Legionella pneumophila str. Lens]
Length = 382
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI+NP Q+ R
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFNKNIENPEQVNR 89
>gi|317154368|ref|YP_004122416.1| glycoside hydrolase family 3 domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316944619|gb|ADU63670.1| glycoside hydrolase family 3 domain protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 379
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPI I+ R +GGVV FDYD S RNI P Q+ R
Sbjct: 58 VDEQSPIVRDIRERNLGGVVLFDYDVALASPNRNIDTPAQVAR 100
>gi|298529404|ref|ZP_07016807.1| glycoside hydrolase family 3 domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510840|gb|EFI34743.1| glycoside hydrolase family 3 domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 372
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D +SPI IQN +GGVV FDYD +S RN+++P QL +
Sbjct: 49 VDENSPIVRDIQNGLVGGVVLFDYDVALESPARNVQSPDQLRK 91
>gi|21672931|ref|NP_660996.1| glycosy hydrolase family protein [Chlorobium tepidum TLS]
gi|21645987|gb|AAM71338.1| glycosyl hydrolase, family 3 [Chlorobium tepidum TLS]
Length = 372
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
S IA I+ R IGGVV FDYD KS RNI++P QL R
Sbjct: 49 SAIAADIRERGIGGVVLFDYDVPSKSPIRNIESPEQLRR 87
>gi|78189925|ref|YP_380263.1| glycosy hydrolase family protein [Chlorobium chlorochromatii
CaD3]
gi|78172124|gb|ABB29220.1| glycosyl hydrolase, family 3 [Chlorobium chlorochromatii CaD3]
Length = 374
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ S I AIQ R IGGVV FDYD S RNI +P QL R
Sbjct: 48 LAESPQIVAAIQKRHIGGVVLFDYDVPFASPTRNITSPSQLAR 90
>gi|52841424|ref|YP_095223.1| glycosy hydrolase family protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628535|gb|AAU27276.1| glycosyl hydrolase family 3 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 395
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ R
Sbjct: 60 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNR 102
>gi|307609946|emb|CBW99474.1| hypothetical protein LPW_12471 [Legionella pneumophila 130b]
Length = 378
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ R
Sbjct: 43 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNR 85
>gi|194337785|ref|YP_002019579.1| Beta-N-acetylhexosaminidase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310262|gb|ACF44962.1| Beta-N-acetylhexosaminidase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 375
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
I+ RQIGGVV FDYD S RNI +P QL R
Sbjct: 58 IRERQIGGVVLFDYDVPSHSTSRNISSPEQLAR 90
>gi|332701405|ref|ZP_08421493.1| Beta-N-acetylhexosaminidase [Desulfovibrio africanus str. Walvis
Bay]
gi|332551554|gb|EGJ48598.1| Beta-N-acetylhexosaminidase [Desulfovibrio africanus str. Walvis
Bay]
Length = 381
Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA ++ ++GGV+ FDYD KS RN+++ QL R
Sbjct: 54 LDEDSPIAQDVRTGRVGGVILFDYDVLLKSPVRNVQSKEQLTR 96
>gi|148358777|ref|YP_001249984.1| glycosyl hydrolase family transporter 3 [Legionella pneumophila
str. Corby]
gi|148280550|gb|ABQ54638.1| glycosyl hydrolase family 3 [Legionella pneumophila str. Corby]
Length = 382
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 89
>gi|296106822|ref|YP_003618522.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
gi|295648723|gb|ADG24570.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
Length = 378
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 43 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 85
>gi|54297148|ref|YP_123517.1| hypothetical protein lpp1193 [Legionella pneumophila str. Paris]
gi|53750933|emb|CAH12344.1| hypothetical protein lpp1193 [Legionella pneumophila str. Paris]
Length = 382
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 89
>gi|193213634|ref|YP_001999587.1| glycoside hydrolase family 3 domain-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193087111|gb|ACF12387.1| glycoside hydrolase family 3 domain protein [Chlorobaculum parvum
NCIB 8327]
Length = 373
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 1 MDSSSPIAL--AIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D+SS A A++ QIGGVV FDYD KS RNI++P Q+ R
Sbjct: 43 LDASSDPAFEKALRAGQIGGVVLFDYDVPSKSPVRNIESPKQVRR 87
>gi|270157239|ref|ZP_06185896.1| glycosyl hydrolase [Legionella longbeachae D-4968]
gi|289164364|ref|YP_003454502.1| N-acetyl-beta-glucosaminidase [Legionella longbeachae NSW150]
gi|269989264|gb|EEZ95518.1| glycosyl hydrolase [Legionella longbeachae D-4968]
gi|288857537|emb|CBJ11375.1| putative N-acetyl-beta-glucosaminidase [Legionella longbeachae
NSW150]
Length = 380
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
++S SPI I+ IGGV+ FDY++ +++ +NI+ P Q+
Sbjct: 44 VNSQSPIVKTIEKDNIGGVILFDYNYHSRNFDKNIETPEQV 84
>gi|118580772|ref|YP_902022.1| glycoside hydrolase family 3 protein [Pelobacter propionicus DSM
2379]
gi|118503482|gb|ABK99964.1| glycoside hydrolase, family 3 domain protein [Pelobacter
propionicus DSM 2379]
Length = 393
Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
SPI++AI+ +GGVV FD + +RNI NP QL+R
Sbjct: 72 SPISVAIREHGVGGVVLFDNNADLGVTERNISNPAQLKR 110
>gi|189347885|ref|YP_001944414.1| Beta-N-acetylhexosaminidase [Chlorobium limicola DSM 245]
gi|189342032|gb|ACD91435.1| Beta-N-acetylhexosaminidase [Chlorobium limicola DSM 245]
Length = 373
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 7 IALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
IA I+ R IGGVV FDYD KS RNI P QL +
Sbjct: 52 IADDIRKRHIGGVVLFDYDVPLKSPVRNIAGPEQLSK 88
>gi|145220500|ref|YP_001131209.1| Beta-N-acetylhexosaminidase [Prosthecochloris vibrioformis DSM
265]
gi|145206664|gb|ABP37707.1| Beta-N-acetylhexosaminidase [Chlorobium phaeovibrioides DSM 265]
Length = 382
Score = 40.0 bits (92), Expect = 0.095, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 3 SSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
SS I AI+ IGGVV FDYD +S RNI +P QL
Sbjct: 51 SSPDIQRAIRENHIGGVVLFDYDVPSRSRPRNIVSPEQL 89
>gi|153872350|ref|ZP_02001271.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152071182|gb|EDN68727.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 403
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
I+NR IGG++ F+YD +KS RNI++P Q+++
Sbjct: 90 IRNRHIGGILLFNYDVAQKSPVRNIQSPAQVKK 122
>gi|307353677|ref|YP_003894728.1| glycoside hydrolase family 3 domain-containing protein
[Methanoplanus petrolearius DSM 11571]
gi|307156910|gb|ADN36290.1| glycoside hydrolase family 3 domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 399
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 DSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
D+ S IA I+N ++GGV+ FD D S +RNIK+P Q+
Sbjct: 73 DNDSQIADDIRNGRVGGVILFDRDVALNSSERNIKSPEQV 112
>gi|95929642|ref|ZP_01312384.1| glycoside hydrolase, family 3-like [Desulfuromonas acetoxidans DSM
684]
gi|95134339|gb|EAT15996.1| glycoside hydrolase, family 3-like [Desulfuromonas acetoxidans DSM
684]
Length = 411
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
IQ R +GGV+ FDYD + + RNI +P QL++
Sbjct: 71 IQKRHLGGVILFDYDVQLRQSGRNIASPSQLKQ 103
>gi|189423788|ref|YP_001950965.1| beta-N-acetylhexosaminidase [Geobacter lovleyi SZ]
gi|189420047|gb|ACD94445.1| Beta-N-acetylhexosaminidase [Geobacter lovleyi SZ]
Length = 392
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
+D S+ I I++ +IGG + FD D K K+Y RNI +P QL+
Sbjct: 68 LDDSNYIVRDIRDYRIGGTILFDRDAKLKTYGRNIVSPEQLQ 109
>gi|256830691|ref|YP_003159419.1| beta-N-acetylhexosaminidase [Desulfomicrobium baculatum DSM 4028]
gi|256579867|gb|ACU91003.1| Beta-N-acetylhexosaminidase [Desulfomicrobium baculatum DSM 4028]
Length = 382
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
+D +SPI I+ +GGV+ FD D + +S +RNI++P Q+
Sbjct: 49 VDGASPILRDIREHNLGGVILFDRDVQLQSPERNIQSPEQV 89
>gi|153864860|ref|ZP_01997612.1| glycosyl hydrolase [Beggiatoa sp. SS]
gi|152145645|gb|EDN72388.1| glycosyl hydrolase [Beggiatoa sp. SS]
Length = 340
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
M PI I+ IGGVV F+YD ++S RNI++P Q++
Sbjct: 94 MSHDDPIVQDIREHHIGGVVLFNYDVARQSPVRNIQSPQQVK 135
>gi|193213964|ref|YP_001995163.1| beta-N-acetylhexosaminidase [Chloroherpeton thalassium ATCC
35110]
gi|193087441|gb|ACF12716.1| Beta-N-acetylhexosaminidase [Chloroherpeton thalassium ATCC
35110]
Length = 384
Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 4 SSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
SS + + I+ ++IGGV+ FDYD K RNI++P Q+
Sbjct: 62 SSKVIVDIRQQRIGGVILFDYDLPLKQASRNIQSPEQV 99
>gi|78187897|ref|YP_375940.1| glycosy hydrolase family protein [Chlorobium luteolum DSM 273]
gi|78167799|gb|ABB24897.1| glycosyl hydrolase, family 3 [Chlorobium luteolum DSM 273]
Length = 378
Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 10 AIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
AI ++IGGVV FDYD ++ RNI P QL+R
Sbjct: 59 AIDRQRIGGVVLFDYDVPSRTPLRNITGPEQLQR 92
>gi|254495931|ref|ZP_05108839.1| glycosy hydrolase family protein [Legionella drancourtii LLAP12]
gi|254354809|gb|EET13436.1| glycosy hydrolase family protein [Legionella drancourtii LLAP12]
Length = 379
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
++S S I I IGGV+ FDY+ + +S+ +NI++P Q+++
Sbjct: 44 INSQSEIVKIIDKNNIGGVILFDYNAQTQSFDKNIESPAQVKQ 86
>gi|153872146|ref|ZP_02001121.1| glycosyl hydrolase, family 3 [Beggiatoa sp. PS]
gi|152071386|gb|EDN68877.1| glycosyl hydrolase, family 3 [Beggiatoa sp. PS]
Length = 436
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
IQ +GGV+ FDYD KS +RNIK+P Q++
Sbjct: 118 IQQFHLGGVILFDYDIVLKSSRRNIKSPRQVK 149
>gi|296444426|ref|ZP_06886391.1| Beta-N-acetylhexosaminidase [Methylosinus trichosporium OB3b]
gi|296258073|gb|EFH05135.1| Beta-N-acetylhexosaminidase [Methylosinus trichosporium OB3b]
Length = 330
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 16 IGGVVRFDYDFKKKSYQRNIKNPIQL 41
+GGV+ FDYD K Y+RNI +P QL
Sbjct: 31 LGGVILFDYDCIDKKYERNIFDPAQL 56
>gi|110597288|ref|ZP_01385576.1| Beta-N-acetylhexosaminidase [Chlorobium ferrooxidans DSM 13031]
gi|110341124|gb|EAT59592.1| Beta-N-acetylhexosaminidase [Chlorobium ferrooxidans DSM 13031]
Length = 389
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 4 SSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
S IA I R+IGGVV FDYD + RNI +P QL
Sbjct: 65 SPGIAEDILERRIGGVVLFDYDVPLHAPSRNISSPEQL 102
>gi|119358346|ref|YP_912990.1| glycoside hydrolase family 3 protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355695|gb|ABL66566.1| glycoside hydrolase, family 3 domain protein [Chlorobium
phaeobacteroides DSM 266]
Length = 375
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ S IA I+ ++IGGVV FDYD +S RNI P +L +
Sbjct: 48 LAESPQIASDIRRQRIGGVVLFDYDVPSRSPIRNITTPSRLMK 90
>gi|189501346|ref|YP_001960816.1| Beta-N-acetylhexosaminidase [Chlorobium phaeobacteroides BS1]
gi|189496787|gb|ACE05335.1| Beta-N-acetylhexosaminidase [Chlorobium phaeobacteroides BS1]
Length = 373
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
I R +GGVV FDYD KS RNI + QL++
Sbjct: 56 ITKRHLGGVVLFDYDVPSKSTGRNITSREQLQK 88
>gi|194334961|ref|YP_002016821.1| beta-N-acetylhexosaminidase [Prosthecochloris aestuarii DSM 271]
gi|194312779|gb|ACF47174.1| Beta-N-acetylhexosaminidase [Prosthecochloris aestuarii DSM 271]
Length = 375
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
I +++IGGV+ FDYD S RNI +P QL
Sbjct: 58 IASKRIGGVILFDYDVPSASTTRNIASPGQL 88
>gi|323700659|ref|ZP_08112571.1| glycoside hydrolase family 3 domain protein [Desulfovibrio sp.
ND132]
gi|323460591|gb|EGB16456.1| glycoside hydrolase family 3 domain protein [Desulfovibrio
desulfuricans ND132]
Length = 380
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
++ S I I+ R +GGV+ FDYD + QRNI++ Q+ R
Sbjct: 59 VNQRSTIVRDIRERHLGGVILFDYDMFWGAGQRNIRSVEQVRR 101
>gi|77918922|ref|YP_356737.1| putative glycosyl hydrolase [Pelobacter carbinolicus DSM 2380]
gi|77545005|gb|ABA88567.1| putative glycosyl hydrolase [Pelobacter carbinolicus DSM 2380]
Length = 382
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D PI I+ R +GGVV F+Y + NI++P QL R
Sbjct: 54 LDKHHPILEDIKQRHLGGVVLFNYGPDRNHPAGNIRSPQQLRR 96
>gi|52841120|ref|YP_094919.1| glycosyl hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296905|ref|YP_123274.1| hypothetical protein lpp0946 [Legionella pneumophila str. Paris]
gi|52628231|gb|AAU26972.1| glycosyl hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|53750690|emb|CAH12097.1| hypothetical protein lpp0946 [Legionella pneumophila str. Paris]
Length = 358
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+++
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQIKQ 63
>gi|54293860|ref|YP_126275.1| hypothetical protein lpl0916 [Legionella pneumophila str. Lens]
gi|53753692|emb|CAH15150.1| hypothetical protein lpl0916 [Legionella pneumophila str. Lens]
Length = 358
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
+ +SP+A + N +GGV+ FD D Y +N++N Q+
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQTQI 61
>gi|307609676|emb|CBW99184.1| hypothetical protein LPW_09671 [Legionella pneumophila 130b]
Length = 358
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
+ +SP+A + N +GGV+ FD D Y +N++N Q+
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQI 61
>gi|254457746|ref|ZP_05071174.1| B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein
[Campylobacterales bacterium GD 1]
gi|207086538|gb|EDZ63822.1| B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein
[Campylobacterales bacterium GD 1]
Length = 555
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+++++ I IQ ++GGVV FD +KK+S +NI P QL+
Sbjct: 38 VNNNTEIVEYIQQYELGGVVLFDRFYKKRSQIKNIDTPEQLQE 80
>gi|254495607|ref|ZP_05108529.1| glycosyl hydrolase [Legionella drancourtii LLAP12]
gi|254355177|gb|EET13790.1| glycosyl hydrolase [Legionella drancourtii LLAP12]
Length = 358
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
SP+A + +GGV+ FD D +Y +N+KN Q++
Sbjct: 25 SPVAEWLSQDGLGGVILFDQDVSTGTYGKNLKNQAQIK 62
>gi|148360469|ref|YP_001251676.1| glycosyl hydrolase [Legionella pneumophila str. Corby]
gi|296106464|ref|YP_003618164.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
gi|148282242|gb|ABQ56330.1| glycosyl hydrolase [Legionella pneumophila str. Corby]
gi|295648365|gb|ADG24212.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
Length = 358
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+ +
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQIRQ 63
Searching..................................................done
Results from round 2
>gi|254781068|ref|YP_003065481.1| hypothetical protein CLIBASIA_04850 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040745|gb|ACT57541.1| hypothetical protein CLIBASIA_04850 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 43
Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/43 (100%), Positives = 43/43 (100%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER
Sbjct: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
>gi|54294135|ref|YP_126550.1| hypothetical protein lpl1199 [Legionella pneumophila str. Lens]
gi|53753967|emb|CAH15438.1| hypothetical protein lpl1199 [Legionella pneumophila str. Lens]
Length = 382
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI+NP Q+ R
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFNKNIENPEQVNR 89
>gi|298529404|ref|ZP_07016807.1| glycoside hydrolase family 3 domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510840|gb|EFI34743.1| glycoside hydrolase family 3 domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 372
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D +SPI IQN +GGVV FDYD +S RN+++P QL +
Sbjct: 49 VDENSPIVRDIQNGLVGGVVLFDYDVALESPARNVQSPDQLRK 91
>gi|52841424|ref|YP_095223.1| glycosy hydrolase family protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628535|gb|AAU27276.1| glycosyl hydrolase family 3 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 395
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ R
Sbjct: 60 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNR 102
>gi|307609946|emb|CBW99474.1| hypothetical protein LPW_12471 [Legionella pneumophila 130b]
Length = 378
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ R
Sbjct: 43 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNR 85
>gi|317154368|ref|YP_004122416.1| glycoside hydrolase family 3 domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316944619|gb|ADU63670.1| glycoside hydrolase family 3 domain protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 379
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPI I+ R +GGVV FDYD S RNI P Q+ R
Sbjct: 58 VDEQSPIVRDIRERNLGGVVLFDYDVALASPNRNIDTPAQVAR 100
>gi|21672931|ref|NP_660996.1| glycosy hydrolase family protein [Chlorobium tepidum TLS]
gi|21645987|gb|AAM71338.1| glycosyl hydrolase, family 3 [Chlorobium tepidum TLS]
Length = 372
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
S IA I+ R IGGVV FDYD KS RNI++P QL R
Sbjct: 49 SAIAADIRERGIGGVVLFDYDVPSKSPIRNIESPEQLRR 87
>gi|78189925|ref|YP_380263.1| glycosy hydrolase family protein [Chlorobium chlorochromatii
CaD3]
gi|78172124|gb|ABB29220.1| glycosyl hydrolase, family 3 [Chlorobium chlorochromatii CaD3]
Length = 374
Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ S I AIQ R IGGVV FDYD S RNI +P QL R
Sbjct: 48 LAESPQIVAAIQKRHIGGVVLFDYDVPFASPTRNITSPSQLAR 90
>gi|296106822|ref|YP_003618522.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
gi|295648723|gb|ADG24570.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
Length = 378
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 43 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 85
>gi|148358777|ref|YP_001249984.1| glycosyl hydrolase family transporter 3 [Legionella pneumophila
str. Corby]
gi|148280550|gb|ABQ54638.1| glycosyl hydrolase family 3 [Legionella pneumophila str. Corby]
Length = 382
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 89
>gi|54297148|ref|YP_123517.1| hypothetical protein lpp1193 [Legionella pneumophila str. Paris]
gi|53750933|emb|CAH12344.1| hypothetical protein lpp1193 [Legionella pneumophila str. Paris]
Length = 382
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA AI+ IGGV+ FD++ + +++ +NI++P Q+ +
Sbjct: 47 VDEKSPIAQAIEKNNIGGVILFDFNQQSQTFDKNIESPEQVNQ 89
>gi|194337785|ref|YP_002019579.1| Beta-N-acetylhexosaminidase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310262|gb|ACF44962.1| Beta-N-acetylhexosaminidase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 375
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
I+ RQIGGVV FDYD S RNI +P QL R
Sbjct: 58 IRERQIGGVVLFDYDVPSHSTSRNISSPEQLAR 90
>gi|270157239|ref|ZP_06185896.1| glycosyl hydrolase [Legionella longbeachae D-4968]
gi|289164364|ref|YP_003454502.1| N-acetyl-beta-glucosaminidase [Legionella longbeachae NSW150]
gi|269989264|gb|EEZ95518.1| glycosyl hydrolase [Legionella longbeachae D-4968]
gi|288857537|emb|CBJ11375.1| putative N-acetyl-beta-glucosaminidase [Legionella longbeachae
NSW150]
Length = 380
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
++S SPI I+ IGGV+ FDY++ +++ +NI+ P Q+ +
Sbjct: 44 VNSQSPIVKTIEKDNIGGVILFDYNYHSRNFDKNIETPEQVRQ 86
>gi|193213634|ref|YP_001999587.1| glycoside hydrolase family 3 domain-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193087111|gb|ACF12387.1| glycoside hydrolase family 3 domain protein [Chlorobaculum parvum
NCIB 8327]
Length = 373
Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 1 MDSSSPIAL--AIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D+SS A A++ QIGGVV FDYD KS RNI++P Q+ R
Sbjct: 43 LDASSDPAFEKALRAGQIGGVVLFDYDVPSKSPVRNIESPKQVRR 87
>gi|153872350|ref|ZP_02001271.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152071182|gb|EDN68727.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 403
Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 2 DSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
D+ I I+NR IGG++ F+YD +KS RNI++P Q+++
Sbjct: 81 DNDDFIVQDIRNRHIGGILLFNYDVAQKSPVRNIQSPAQVKK 122
>gi|332701405|ref|ZP_08421493.1| Beta-N-acetylhexosaminidase [Desulfovibrio africanus str. Walvis
Bay]
gi|332551554|gb|EGJ48598.1| Beta-N-acetylhexosaminidase [Desulfovibrio africanus str. Walvis
Bay]
Length = 381
Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+D SPIA ++ ++GGV+ FDYD KS RN+++ QL R
Sbjct: 54 LDEDSPIAQDVRTGRVGGVILFDYDVLLKSPVRNVQSKEQLTR 96
>gi|145220500|ref|YP_001131209.1| Beta-N-acetylhexosaminidase [Prosthecochloris vibrioformis DSM
265]
gi|145206664|gb|ABP37707.1| Beta-N-acetylhexosaminidase [Chlorobium phaeovibrioides DSM 265]
Length = 382
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 3 SSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
SS I AI+ IGGVV FDYD +S RNI +P QL
Sbjct: 51 SSPDIQRAIRENHIGGVVLFDYDVPSRSRPRNIVSPEQL 89
>gi|118580772|ref|YP_902022.1| glycoside hydrolase family 3 protein [Pelobacter propionicus DSM
2379]
gi|118503482|gb|ABK99964.1| glycoside hydrolase, family 3 domain protein [Pelobacter
propionicus DSM 2379]
Length = 393
Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 5 SPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
SPI++AI+ +GGVV FD + +RNI NP QL+R
Sbjct: 72 SPISVAIREHGVGGVVLFDNNADLGVTERNISNPAQLKR 110
>gi|189347885|ref|YP_001944414.1| Beta-N-acetylhexosaminidase [Chlorobium limicola DSM 245]
gi|189342032|gb|ACD91435.1| Beta-N-acetylhexosaminidase [Chlorobium limicola DSM 245]
Length = 373
Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 7 IALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
IA I+ R IGGVV FDYD KS RNI P QL +
Sbjct: 52 IADDIRKRHIGGVVLFDYDVPLKSPVRNIAGPEQLSK 88
>gi|153864860|ref|ZP_01997612.1| glycosyl hydrolase [Beggiatoa sp. SS]
gi|152145645|gb|EDN72388.1| glycosyl hydrolase [Beggiatoa sp. SS]
Length = 340
Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
M PI I+ IGGVV F+YD ++S RNI++P Q++
Sbjct: 94 MSHDDPIVQDIREHHIGGVVLFNYDVARQSPVRNIQSPQQVK 135
>gi|189423788|ref|YP_001950965.1| beta-N-acetylhexosaminidase [Geobacter lovleyi SZ]
gi|189420047|gb|ACD94445.1| Beta-N-acetylhexosaminidase [Geobacter lovleyi SZ]
Length = 392
Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
+D S+ I I++ +IGG + FD D K K+Y RNI +P QL+
Sbjct: 68 LDDSNYIVRDIRDYRIGGTILFDRDAKLKTYGRNIVSPEQLQ 109
>gi|78187897|ref|YP_375940.1| glycosy hydrolase family protein [Chlorobium luteolum DSM 273]
gi|78167799|gb|ABB24897.1| glycosyl hydrolase, family 3 [Chlorobium luteolum DSM 273]
Length = 378
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 10 AIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
AI ++IGGVV FDYD ++ RNI P QL+R
Sbjct: 59 AIDRQRIGGVVLFDYDVPSRTPLRNITGPEQLQR 92
>gi|307353677|ref|YP_003894728.1| glycoside hydrolase family 3 domain-containing protein
[Methanoplanus petrolearius DSM 11571]
gi|307156910|gb|ADN36290.1| glycoside hydrolase family 3 domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 399
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 2 DSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
D+ S IA I+N ++GGV+ FD D S +RNIK+P Q+
Sbjct: 73 DNDSQIADDIRNGRVGGVILFDRDVALNSSERNIKSPEQV 112
>gi|254495931|ref|ZP_05108839.1| glycosy hydrolase family protein [Legionella drancourtii LLAP12]
gi|254354809|gb|EET13436.1| glycosy hydrolase family protein [Legionella drancourtii LLAP12]
Length = 379
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
++S S I I IGGV+ FDY+ + +S+ +NI++P Q+++
Sbjct: 44 INSQSEIVKIIDKNNIGGVILFDYNAQTQSFDKNIESPAQVKQ 86
>gi|193213964|ref|YP_001995163.1| beta-N-acetylhexosaminidase [Chloroherpeton thalassium ATCC
35110]
gi|193087441|gb|ACF12716.1| Beta-N-acetylhexosaminidase [Chloroherpeton thalassium ATCC
35110]
Length = 384
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 4 SSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
SS + + I+ ++IGGV+ FDYD K RNI++P Q+
Sbjct: 62 SSKVIVDIRQQRIGGVILFDYDLPLKQASRNIQSPEQV 99
>gi|256830691|ref|YP_003159419.1| beta-N-acetylhexosaminidase [Desulfomicrobium baculatum DSM 4028]
gi|256579867|gb|ACU91003.1| Beta-N-acetylhexosaminidase [Desulfomicrobium baculatum DSM 4028]
Length = 382
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
+D +SPI I+ +GGV+ FD D + +S +RNI++P Q+
Sbjct: 49 VDGASPILRDIREHNLGGVILFDRDVQLQSPERNIQSPEQV 89
>gi|95929642|ref|ZP_01312384.1| glycoside hydrolase, family 3-like [Desulfuromonas acetoxidans DSM
684]
gi|95134339|gb|EAT15996.1| glycoside hydrolase, family 3-like [Desulfuromonas acetoxidans DSM
684]
Length = 411
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
IQ R +GGV+ FDYD + + RNI +P QL++
Sbjct: 71 IQKRHLGGVILFDYDVQLRQSGRNIASPSQLKQ 103
>gi|153872146|ref|ZP_02001121.1| glycosyl hydrolase, family 3 [Beggiatoa sp. PS]
gi|152071386|gb|EDN68877.1| glycosyl hydrolase, family 3 [Beggiatoa sp. PS]
Length = 436
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
IQ +GGV+ FDYD KS +RNIK+P Q++
Sbjct: 118 IQQFHLGGVILFDYDIVLKSSRRNIKSPRQVK 149
>gi|119358346|ref|YP_912990.1| glycoside hydrolase family 3 protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355695|gb|ABL66566.1| glycoside hydrolase, family 3 domain protein [Chlorobium
phaeobacteroides DSM 266]
Length = 375
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ S IA I+ ++IGGVV FDYD +S RNI P +L +
Sbjct: 48 LAESPQIASDIRRQRIGGVVLFDYDVPSRSPIRNITTPSRLMK 90
>gi|110597288|ref|ZP_01385576.1| Beta-N-acetylhexosaminidase [Chlorobium ferrooxidans DSM 13031]
gi|110341124|gb|EAT59592.1| Beta-N-acetylhexosaminidase [Chlorobium ferrooxidans DSM 13031]
Length = 389
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 3 SSSP-IALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
+ SP IA I R+IGGVV FDYD + RNI +P QL
Sbjct: 63 AESPGIAEDILERRIGGVVLFDYDVPLHAPSRNISSPEQL 102
>gi|189501346|ref|YP_001960816.1| Beta-N-acetylhexosaminidase [Chlorobium phaeobacteroides BS1]
gi|189496787|gb|ACE05335.1| Beta-N-acetylhexosaminidase [Chlorobium phaeobacteroides BS1]
Length = 373
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
I R +GGVV FDYD KS RNI + QL++
Sbjct: 56 ITKRHLGGVVLFDYDVPSKSTGRNITSREQLQK 88
>gi|194334961|ref|YP_002016821.1| beta-N-acetylhexosaminidase [Prosthecochloris aestuarii DSM 271]
gi|194312779|gb|ACF47174.1| Beta-N-acetylhexosaminidase [Prosthecochloris aestuarii DSM 271]
Length = 375
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 11 IQNRQIGGVVRFDYDFKKKSYQRNIKNPIQL 41
I +++IGGV+ FDYD S RNI +P QL
Sbjct: 58 IASKRIGGVILFDYDVPSASTTRNIASPGQL 88
>gi|296444426|ref|ZP_06886391.1| Beta-N-acetylhexosaminidase [Methylosinus trichosporium OB3b]
gi|296258073|gb|EFH05135.1| Beta-N-acetylhexosaminidase [Methylosinus trichosporium OB3b]
Length = 330
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 16 IGGVVRFDYDFKKKSYQRNIKNPIQL 41
+GGV+ FDYD K Y+RNI +P QL
Sbjct: 31 LGGVILFDYDCIDKKYERNIFDPAQL 56
>gi|254457746|ref|ZP_05071174.1| B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein
[Campylobacterales bacterium GD 1]
gi|207086538|gb|EDZ63822.1| B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein
[Campylobacterales bacterium GD 1]
Length = 555
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLE 42
+++++ I IQ ++GGVV FD +KK+S +NI P QL+
Sbjct: 38 VNNNTEIVEYIQQYELGGVVLFDRFYKKRSQIKNIDTPEQLQ 79
>gi|323700659|ref|ZP_08112571.1| glycoside hydrolase family 3 domain protein [Desulfovibrio sp.
ND132]
gi|323460591|gb|EGB16456.1| glycoside hydrolase family 3 domain protein [Desulfovibrio
desulfuricans ND132]
Length = 380
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
++ S I I+ R +GGV+ FDYD + QRNI++ Q+ R
Sbjct: 59 VNQRSTIVRDIRERHLGGVILFDYDMFWGAGQRNIRSVEQVRR 101
>gi|52841120|ref|YP_094919.1| glycosyl hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296905|ref|YP_123274.1| hypothetical protein lpp0946 [Legionella pneumophila str. Paris]
gi|52628231|gb|AAU26972.1| glycosyl hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|53750690|emb|CAH12097.1| hypothetical protein lpp0946 [Legionella pneumophila str. Paris]
Length = 358
Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+++
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQIKQ 63
>gi|54293860|ref|YP_126275.1| hypothetical protein lpl0916 [Legionella pneumophila str. Lens]
gi|53753692|emb|CAH15150.1| hypothetical protein lpl0916 [Legionella pneumophila str. Lens]
Length = 358
Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+ +
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQTQIRQ 63
>gi|307609676|emb|CBW99184.1| hypothetical protein LPW_09671 [Legionella pneumophila 130b]
Length = 358
Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+ +
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQIRQ 63
>gi|148360469|ref|YP_001251676.1| glycosyl hydrolase [Legionella pneumophila str. Corby]
gi|296106464|ref|YP_003618164.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
gi|148282242|gb|ABQ56330.1| glycosyl hydrolase [Legionella pneumophila str. Corby]
gi|295648365|gb|ADG24212.1| beta-N-acetylhexosaminidase [Legionella pneumophila 2300/99
Alcoy]
Length = 358
Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1 MDSSSPIALAIQNRQIGGVVRFDYDFKKKSYQRNIKNPIQLER 43
+ +SP+A + N +GGV+ FD D Y +N++N Q+ +
Sbjct: 21 LHDNSPVAQWLSNDGLGGVLLFDKDLSTGIYGKNLRNQAQIRQ 63
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.319 0.136 0.377
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 727,090,752
Number of Sequences: 14124377
Number of extensions: 16078863
Number of successful extensions: 29601
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29520
Number of HSP's gapped (non-prelim): 81
length of query: 43
length of database: 4,842,793,630
effective HSP length: 17
effective length of query: 26
effective length of database: 4,602,679,221
effective search space: 119669659746
effective search space used: 119669659746
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)