RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254781069|ref|YP_003065482.1| hypothetical protein
CLIBASIA_04855 [Candidatus Liberibacter asiaticus str. psy62]
         (43 letters)



>gnl|CDD|180024 PRK05337, PRK05337, beta-hexosaminidase; Provisional.
          Length = 337

 Score = 29.0 bits (66), Expect = 0.26
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 18 PLMIAIDYEGGEVSRL 33
          PL+IA+D EGG V R 
Sbjct: 56 PLLIAVDQEGGRVQRF 71


>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
          Length = 682

 Score = 24.3 bits (52), Expect = 7.1
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 5   ADKQKVNSVESSYPLMIAIDYEG 27
           AD   +N +++ YPL+IA++Y G
Sbjct: 467 ADVNAIN-IQNQYPLLIALEYHG 488


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.314    0.127    0.339 

Gapped
Lambda     K      H
   0.267   0.0811    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 593,533
Number of extensions: 18438
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 5
Length of query: 43
Length of database: 5,994,473
Length adjustment: 17
Effective length of query: 26
Effective length of database: 5,627,137
Effective search space: 146305562
Effective search space used: 146305562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (22.9 bits)