HHSEARCH alignment of GI: 254781070 and SCOP domain: d1tr9a_

Alignment
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]}
Probab=99.48  E-value=1.1e-14  Score=102.59  Aligned_cols=53  Identities=21%  Similarity=0.310  Sum_probs=47.2

Q ss_pred             CHHHHHHCCCCCCCCEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             96899961896122114500468878714136775888899999999999999867
Q gi|254781070|r    1 MAKNLVTSGINVNFSPVLDLLYGPETFIAQKRSIFSRIPAKAEESAQLFSRTYIKN   56 (58)
Q Consensus         1 iA~~L~~~Gin~n~aPVlDi~~~~~~~i~~~~Rsfg~dp~~V~~~a~afi~~~~~n   56 (58)
                      +|+||+++|||||||||+|+..++  .+++ +||||+||+.|++++.+|++|++++
T Consensus       102 ~~~el~~~Gin~~~aPv~Dv~~~~--~~i~-~rsfg~Dp~~v~~~a~a~i~G~q~~  154 (330)
T d1tr9a_         102 MAAELIAHDVDLSFAPVLDMGFAC--KAIG-NRAFGEDVQTVLKHSSAFLRGMKAV  154 (330)
T ss_dssp             HHHHHHTTTCCEECCCBCCCCSCS--TTTG-GGSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCCHHCCCCCCC--CHHH-HCCCCCCHHHHHHHHHHEEECCCCC
T ss_conf             889999838884400001355442--0454-3235432018777543415460233


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-hexosaminidase NagZ
species: Vibrio cholerae [TaxId: 666]