Query gi|254781071|ref|YP_003065484.1| hypothetical protein CLIBASIA_04865 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 71
No_of_seqs 117 out of 1614
Neff 5.6
Searched_HMMs 33803
Date Wed Jun 1 22:43:03 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781071.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1x38_A Beta-D-glucan exohydro 99.5 9.9E-14 2.9E-18 97.4 6.1 67 2-70 275-357 (365)
2 >3f94_A Beta-glucosidase; (alp 99.4 1.4E-13 4.1E-18 96.6 3.8 67 2-70 284-362 (397)
3 >3bmx_A Uncharacterized lipopr 99.4 3.7E-13 1.1E-17 94.2 5.0 67 2-70 308-397 (419)
4 >2oxn_A Beta-hexosaminidase; T 99.3 7.7E-14 2.3E-18 98.0 -3.5 67 2-70 232-311 (340)
5 >2wt3_A Beta-glucosidase; hydr 99.2 5.7E-12 1.7E-16 87.6 0.8 67 2-70 232-308 (721)
6 >1d2d_A TRNA synthetase, tRNA 61.4 15 0.00044 19.0 4.6 32 40-71 11-42 (59)
7 >1fyj_A Multifunctional aminoa 57.8 12 0.00035 19.5 3.5 31 40-70 14-44 (57)
8 >1x59_A Histidyl-tRNA syntheta 37.1 37 0.0011 16.7 4.6 32 40-71 23-54 (73)
9 >2djv_A Methionyl-tRNA synthet 34.5 41 0.0012 16.5 4.1 31 40-70 27-57 (79)
10 >1jr3_D DNA polymerase III, de 33.5 29 0.00086 17.3 2.3 39 24-62 27-65 (67)
11 >1orj_A Flagellar protein FLIS 28.2 53 0.0016 15.9 6.7 49 19-67 60-115 (130)
12 >2iyf_A OLED, oleandomycin gly 28.1 53 0.0016 15.9 3.1 55 12-66 81-146 (163)
13 >1j5s_A Uronate isomerase; TM0 27.5 55 0.0016 15.8 4.1 27 38-64 84-110 (119)
14 >2pq6_A UDP-glucuronosyl/UDP-g 25.7 23 0.00068 17.9 0.7 54 12-65 119-183 (206)
15 >1ea0_A Glutamate synthase [NA 24.5 63 0.0019 15.5 3.9 51 15-65 227-277 (357)
16 >3dez_A OPRT, oprtase, orotate 23.5 56 0.0017 15.8 2.3 43 16-58 104-147 (159)
17 >2r7k_A 5-formaminoimidazole-4 23.3 66 0.002 15.3 2.9 26 33-58 28-53 (58)
18 >1aor_A Aldehyde ferredoxin ox 22.3 70 0.0021 15.2 3.5 33 24-56 27-59 (111)
No 1
>>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} (A:1-365)
Probab=99.46 E-value=9.9e-14 Score=97.36 Aligned_cols=67 Identities=30% Similarity=0.347 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHCCCCH------------HHHHHHHHCCCHHHHHHH----HHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 75712037755412349------------999999972412454255----49999999997999989999999999999
Q gi|254781071|r 2 RWAFKALLALIACKWNL------------SRIIAVYNAGADQQDPAD----VIELIYAHVKSGEIKPSRIESAYQRIIYL 65 (71)
Q Consensus 2 ~W~f~g~~~~v~~~w~~------------~~~~~a~nAG~Dle~p~~----~~~~i~~aV~~G~i~~~~id~sv~RIL~l 65 (71)
+|||+|+| |+||... +.++.|++||+||+|+++ .++.|.+++++|.+++++||+||+|||++
T Consensus 275 ~~gF~G~v--isD~~~~~~l~~~~~~~~~~~~~~al~AG~Dl~l~~~~~~~~~~~l~~~v~~g~i~~~~id~a~~ril~~ 352 (365)
T 1x38_A 275 TLKFKGFV--ISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRV 352 (365)
T ss_dssp TSCCCSEE--ECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCCCEE--ECHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 26887356--4616688765513356643115688862764233554401111110221248964589999999999999
Q ss_pred HHHHC
Q ss_conf 99736
Q gi|254781071|r 66 KNKMK 70 (71)
Q Consensus 66 k~kl~ 70 (71)
|+|+.
T Consensus 353 k~~lg 357 (365)
T 1x38_A 353 KFTMG 357 (365)
T ss_dssp HHHTT
T ss_pred HHHHH
T ss_conf 98776
No 2
>>3f94_A Beta-glucosidase; (alpha/beta)8 barrel, (alpha/beta)6 sheet, hydrolase; 2.30A {Pseudoalteromonas SP} PDB: 3f93_A (A:1-397)
Probab=99.40 E-value=1.4e-13 Score=96.56 Aligned_cols=67 Identities=22% Similarity=0.247 Sum_probs=58.0
Q ss_pred CCCCCHHHHHHHCCCCH--------HHHHHHHHCCCHHHHHHH----HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 75712037755412349--------999999972412454255----499999999979999899999999999999973
Q gi|254781071|r 2 RWAFKALLALIACKWNL--------SRIIAVYNAGADQQDPAD----VIELIYAHVKSGEIKPSRIESAYQRIIYLKNKM 69 (71)
Q Consensus 2 ~W~f~g~~~~v~~~w~~--------~~~~~a~nAG~Dle~p~~----~~~~i~~aV~~G~i~~~~id~sv~RIL~lk~kl 69 (71)
+|||+|+| ++|+.+. +.++.+++||.|+.+.+. .++.|.+++++|.|++++||++|+|||++|+|+
T Consensus 284 ~~gF~G~i--~SD~~~~~~~~~~~~ea~~~ai~AG~Dl~l~~~~~~~~~~~l~~a~~~g~i~~~~l~~av~Ril~~k~~~ 361 (397)
T 3f94_A 284 QLGFDGFV--VSDWNAHKFVEGCDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRW 361 (397)
T ss_dssp CSCCCSEE--ECCTTGGGGSTTCBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC--CCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 14888763--6632454302478403478987534552247533454321023332257631888739999999999873
Q ss_pred C
Q ss_conf 6
Q gi|254781071|r 70 K 70 (71)
Q Consensus 70 ~ 70 (71)
.
T Consensus 362 g 362 (397)
T 3f94_A 362 G 362 (397)
T ss_dssp T
T ss_pred C
T ss_conf 8
No 3
>>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycosidase, hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* (A:1-419)
Probab=99.38 E-value=3.7e-13 Score=94.21 Aligned_cols=67 Identities=27% Similarity=0.406 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHHCCCCH----------HHHHHHHHCCCHHHHHHH-------------HHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 75712037755412349----------999999972412454255-------------4999999999799998999999
Q gi|254781071|r 2 RWAFKALLALIACKWNL----------SRIIAVYNAGADQQDPAD-------------VIELIYAHVKSGEIKPSRIESA 58 (71)
Q Consensus 2 ~W~f~g~~~~v~~~w~~----------~~~~~a~nAG~Dle~p~~-------------~~~~i~~aV~~G~i~~~~id~s 58 (71)
+|||+|+| ++||.+. ++++.+++||+|+.+++. .++.+.+++++|++++++||++
T Consensus 308 e~gF~G~v--iSD~~~~~~~~~~~~~~~~~~~a~~AG~D~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~G~i~~~rld~a 385 (419)
T 3bmx_A 308 EMGFNGVI--VTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNS 385 (419)
T ss_dssp CSCCCSEE--ECSCTTSHHHHTTSCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred HHCCCCCC--CCCHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 62668841--4646778888733412489999997189967056864335664107899999999998599899999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999736
Q gi|254781071|r 59 YQRIIYLKNKMK 70 (71)
Q Consensus 59 v~RIL~lk~kl~ 70 (71)
|+|||++|+|+.
T Consensus 386 v~Ril~~k~~~G 397 (419)
T 3bmx_A 386 VERIISLKIKRG 397 (419)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999818
No 4
>>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A (A:)
Probab=99.28 E-value=7.7e-14 Score=97.97 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=59.0
Q ss_pred CCCCCHHHHHHHCCCCHH----------HHHHHHHCCCHHHHHHH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 757120377554123499----------99999972412454255---49999999997999989999999999999997
Q gi|254781071|r 2 RWAFKALLALIACKWNLS----------RIIAVYNAGADQQDPAD---VIELIYAHVKSGEIKPSRIESAYQRIIYLKNK 68 (71)
Q Consensus 2 ~W~f~g~~~~v~~~w~~~----------~~~~a~nAG~Dle~p~~---~~~~i~~aV~~G~i~~~~id~sv~RIL~lk~k 68 (71)
+|||+|+| |+||.+.. .++.+++||+||+|++. .++.|.+++++|++++++||++|+|||++|+|
T Consensus 232 e~gf~G~i--iSD~~~~~~~~~~~~~~~~~~~al~AG~Dl~l~~~~~~~~~~l~~av~~g~i~~~~i~~av~ril~~k~~ 309 (340)
T 2oxn_A 232 ELGFKGIV--FSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELK 309 (340)
T ss_dssp CTCCCSEE--EEEEGGGSCHHHHCSHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSCCCCCGGGGGGSCSCCCCHHHHH
T ss_pred HCCCCCEE--EECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHH
T ss_conf 64998479--8056652300005999999999997699789978987999999972662214688999874123888898
Q ss_pred HC
Q ss_conf 36
Q gi|254781071|r 69 MK 70 (71)
Q Consensus 69 l~ 70 (71)
+.
T Consensus 310 ~g 311 (340)
T 2oxn_A 310 RL 311 (340)
T ss_dssp TS
T ss_pred HH
T ss_conf 89
No 5
>>2wt3_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2wt6_A 2x40_A 2x41_A* 2x42_A* 2wt5_A* (A:)
Probab=99.15 E-value=5.7e-12 Score=87.62 Aligned_cols=67 Identities=15% Similarity=0.248 Sum_probs=58.4
Q ss_pred CCCCCHHHHHHHCCCCHHHHH----------HHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 757120377554123499999----------999724124542554999999999799998999999999999999736
Q gi|254781071|r 2 RWAFKALLALIACKWNLSRII----------AVYNAGADQQDPADVIELIYAHVKSGEIKPSRIESAYQRIIYLKNKMK 70 (71)
Q Consensus 2 ~W~f~g~~~~v~~~w~~~~~~----------~a~nAG~Dle~p~~~~~~i~~aV~~G~i~~~~id~sv~RIL~lk~kl~ 70 (71)
+|||+|+| ++||.+..... .+++||.|+.+.+..++.+.+++++|+|++++||++|+|||++|+++.
T Consensus 232 ~~gf~G~v--~sD~~~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~~~~~~~a~~~g~i~~~~ld~a~~Ril~~k~~~G 308 (721)
T 2wt3_A 232 EWGFEGFV--MSDWYAGDNPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAP 308 (721)
T ss_dssp CTCCCSEE--EECTTCSSCHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSG
T ss_pred HHCCCEEE--ECCCCCCHHHHHHHHHCCCHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 75888199--646334053789987244510351010378751047999999998599870228999999999999842
No 6
>>1d2d_A TRNA synthetase, tRNA ligase; tRNA synthetase (ligase), protein transcription; NMR {Cricetulus griseus} (A:)
Probab=61.44 E-value=15 Score=18.96 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=28.1
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999997999989999999999999997369
Q gi|254781071|r 40 LIYAHVKSGEIKPSRIESAYQRIIYLKNKMKT 71 (71)
Q Consensus 40 ~i~~aV~~G~i~~~~id~sv~RIL~lk~kl~s 71 (71)
.++...++..-+.+.|+.+|...|.||..+++
T Consensus 11 d~VR~LKa~kA~k~~i~~aV~~Ll~LK~~~~~ 42 (59)
T 1d2d_A 11 EVVRKLKAEKAPKAKVTEAVECLLSLKAEYKE 42 (59)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999870499999999999999999999999
No 7
>>1fyj_A Multifunctional aminoacyl-tRNA synthetase; helix-turn-helix, ligase; NMR {Homo sapiens} (A:)
Probab=57.75 E-value=12 Score=19.46 Aligned_cols=31 Identities=16% Similarity=0.301 Sum_probs=27.7
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999799998999999999999999736
Q gi|254781071|r 40 LIYAHVKSGEIKPSRIESAYQRIIYLKNKMK 70 (71)
Q Consensus 40 ~i~~aV~~G~i~~~~id~sv~RIL~lk~kl~ 70 (71)
.++...++..-+.+.|+.+|...|.||..|+
T Consensus 14 d~VR~LKa~kA~k~~i~~aV~~Ll~LK~~l~ 44 (57)
T 1fyj_A 14 DVVRELKAKKAPKEDVDAAVKQLLSLKAEYK 44 (57)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5999987212866668999999998899988
No 8
>>1x59_A Histidyl-tRNA synthetase; hisrs, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=37.09 E-value=37 Score=16.72 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=27.9
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999997999989999999999999997369
Q gi|254781071|r 40 LIYAHVKSGEIKPSRIESAYQRIIYLKNKMKT 71 (71)
Q Consensus 40 ~i~~aV~~G~i~~~~id~sv~RIL~lk~kl~s 71 (71)
.++...+...-+.+.|+..|...|.||..++.
T Consensus 23 d~VR~LKa~kA~k~~i~~aV~~Ll~LK~~l~~ 54 (73)
T 1x59_A 23 ERVRGLKQQKASAELIEEEVAKLLKLKAQLGP 54 (73)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999986589888989999999999998610
No 9
>>2djv_A Methionyl-tRNA synthetase; EC 6.1.1.10, WHEP-TRS domain, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=34.47 E-value=41 Score=16.48 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=27.5
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999799998999999999999999736
Q gi|254781071|r 40 LIYAHVKSGEIKPSRIESAYQRIIYLKNKMK 70 (71)
Q Consensus 40 ~i~~aV~~G~i~~~~id~sv~RIL~lk~kl~ 70 (71)
.++...+...-+.+.|+..|...|.||..|+
T Consensus 27 d~VR~LKa~kA~k~~i~~aV~~Ll~LK~~lk 57 (79)
T 2djv_A 27 NIVRELKAQKADKNEVAAEVAKLLDLKKQLA 57 (79)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988349988999999999999999999
No 10
>>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} (D:145-211)
Probab=33.46 E-value=29 Score=17.34 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=32.0
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 997241245425549999999997999989999999999
Q gi|254781071|r 24 VYNAGADQQDPADVIELIYAHVKSGEIKPSRIESAYQRI 62 (71)
Q Consensus 24 a~nAG~Dle~p~~~~~~i~~aV~~G~i~~~~id~sv~RI 62 (71)
+-.-|.|+..-..-++.|.-.+.+|+|+.+.|.+.|.|-
T Consensus 27 ~~~~g~dl~~l~~EleKL~ly~~~~~It~edV~~~v~~~ 65 (67)
T 1jr3_D 27 CYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDA 65 (67)
T ss_dssp HHSSTTCHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
T ss_conf 987158788999999999973678875167899886031
No 11
>>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four helix bundle; 2.25A {Aquifex aeolicus VF5} (A:)
Probab=28.24 E-value=53 Score=15.88 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=38.9
Q ss_pred HHHHHHHHCCCHHHHHHH-------HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999972412454255-------4999999999799998999999999999999
Q gi|254781071|r 19 SRIIAVYNAGADQQDPAD-------VIELIYAHVKSGEIKPSRIESAYQRIIYLKN 67 (71)
Q Consensus 19 ~~~~~a~nAG~Dle~p~~-------~~~~i~~aV~~G~i~~~~id~sv~RIL~lk~ 67 (71)
..++..+++++|.+.+++ .|+.+...+....++.+.|++...=+-.++.
T Consensus 60 ~~Ii~eL~~~Ld~e~g~eia~~L~~LY~y~~~~L~~an~~~d~l~ev~~il~~L~e 115 (130)
T 1orj_A 60 YDIISALKSFLDHEKGKEIAKNLDTIYTIILNTLVKVDKTKEELQKILEILKDLRE 115 (130)
T ss_dssp HHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999999554852364889879999999999999876889999999999999999
No 12
>>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} (A:223-385)
Probab=28.11 E-value=53 Score=15.86 Aligned_cols=55 Identities=2% Similarity=-0.091 Sum_probs=39.4
Q ss_pred HHCCCCHHHHHHHHHCCCHHHHHHHHHH---HHHHH--------HHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 5412349999999972412454255499---99999--------9979999899999999999999
Q gi|254781071|r 12 IACKWNLSRIIAVYNAGADQQDPADVIE---LIYAH--------VKSGEIKPSRIESAYQRIIYLK 66 (71)
Q Consensus 12 v~~~w~~~~~~~a~nAG~Dle~p~~~~~---~i~~a--------V~~G~i~~~~id~sv~RIL~lk 66 (71)
+..+.+...+.+++.+|+=+..-|...+ .-... +...+++.+.|.++++++|.-+
T Consensus 81 ~I~hgG~~s~~Eal~~GvP~i~iP~~~dQ~~nA~~v~~~G~g~~l~~~~~t~~~l~~~i~~il~~~ 146 (163)
T 2iyf_A 81 FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDP 146 (163)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred EEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCH
T ss_conf 786233114899998299979436535579999999987978980504699999999999996699
No 13
>>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} (A:1-35,A:380-463)
Probab=27.45 E-value=55 Score=15.80 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=23.6
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999799998999999999999
Q gi|254781071|r 38 IELIYAHVKSGEIKPSRIESAYQRIIY 64 (71)
Q Consensus 38 ~~~i~~aV~~G~i~~~~id~sv~RIL~ 64 (71)
+..|-+.|++|+++++.+.+-+++|-.
T Consensus 84 c~~Lg~lVe~G~lp~Dea~~iv~dI~Y 110 (119)
T 1j5s_A 84 SNVVGEMVEKGQIPIKEARELVKHVSY 110 (119)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 999999998699999999999999997
No 14
>>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} (A:257-462)
Probab=25.69 E-value=23 Score=17.90 Aligned_cols=54 Identities=9% Similarity=-0.081 Sum_probs=38.9
Q ss_pred HHCCCCHHHHHHHHHCCCHHHHHH---HHHHHHHHH--------HHCCCCCHHHHHHHHHHHHHH
Q ss_conf 541234999999997241245425---549999999--------997999989999999999999
Q gi|254781071|r 12 IACKWNLSRIIAVYNAGADQQDPA---DVIELIYAH--------VKSGEIKPSRIESAYQRIIYL 65 (71)
Q Consensus 12 v~~~w~~~~~~~a~nAG~Dle~p~---~~~~~i~~a--------V~~G~i~~~~id~sv~RIL~l 65 (71)
+.++.|..++.+++.+|+=+..-+ +....-... +..+.++.+.|.++++++|.-
T Consensus 119 ~i~HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~g~g~~~~~~~~t~~~i~~ai~~vl~~ 183 (206)
T 2pq6_A 119 FLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG 183 (206)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS
T ss_pred EEECCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 98478832699999849998947642112889999999717268608987999999999999769
No 15
>>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} (A:423-779)
Probab=24.54 E-value=63 Score=15.49 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 234999999997241245425549999999997999989999999999999
Q gi|254781071|r 15 KWNLSRIIAVYNAGADQQDPADVIELIYAHVKSGEIKPSRIESAYQRIIYL 65 (71)
Q Consensus 15 ~w~~~~~~~a~nAG~Dle~p~~~~~~i~~aV~~G~i~~~~id~sv~RIL~l 65 (71)
-.+.+++++++--|.|..+|+.....+......|..+...-.+.+.+.++.
T Consensus 227 ir~~~DvakalalGAdaV~~g~~~~~~~~~~~~g~~~~~~~~~~v~n~i~~ 277 (357)
T 1ea0_A 227 GLDTHYFAVLIGVGATTVNAYLAQEAIAERHRRGLFGSMPLEKGMANYKKA 277 (357)
T ss_dssp CCSHHHHHHHHTTTCSEEECHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 376999999983776140587999999999964887898999999999999
No 16
>>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, magnesium, pyrimidine biosynthesis; 2.40A {Streptococcus mutans} (A:1-99,A:184-243)
Probab=23.50 E-value=56 Score=15.75 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=30.5
Q ss_pred CCHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 3499999999-724124542554999999999799998999999
Q gi|254781071|r 16 WNLSRIIAVY-NAGADQQDPADVIELIYAHVKSGEIKPSRIESA 58 (71)
Q Consensus 16 w~~~~~~~a~-nAG~Dle~p~~~~~~i~~aV~~G~i~~~~id~s 58 (71)
|+...+.+.| .||+.+---.++.+.|..|.+.|.|+++.++.-
T Consensus 104 Y~~~~a~~~f~~~~~~~~~L~~y~~ll~~a~~~~~i~~~~~~~l 147 (159)
T 3dez_A 104 YELPKATANFEKASVKLVTLSNYSELIKVAKVQGYIDADGLTLL 147 (159)
T ss_dssp CCCHHHHHHHHHHTCCEEESSCHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 88630799999669979993759999999998699999999999
No 17
>>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} (A:144-201)
Probab=23.29 E-value=66 Score=15.35 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 42554999999999799998999999
Q gi|254781071|r 33 DPADVIELIYAHVKSGEIKPSRIESA 58 (71)
Q Consensus 33 ~p~~~~~~i~~aV~~G~i~~~~id~s 58 (71)
.|.++.+.+...++.|-|+++.++.+
T Consensus 28 s~eef~~k~~~l~~~Gii~~edl~~a 53 (58)
T 2r7k_A 28 STEEFYKKAEDLKKRGILTDEDIANA 53 (58)
T ss_dssp SHHHHHHHHHHHHHTTSCCHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 87899999999986523101113699
No 18
>>1aor_A Aldehyde ferredoxin oxidoreductase; HET: PTE; 2.30A {Pyrococcus furiosus} (A:311-421)
Probab=22.27 E-value=70 Score=15.23 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=28.6
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 997241245425549999999997999989999
Q gi|254781071|r 24 VYNAGADQQDPADVIELIYAHVKSGEIKPSRIE 56 (71)
Q Consensus 24 a~nAG~Dle~p~~~~~~i~~aV~~G~i~~~~id 56 (71)
+-.-|+|....+..+..+.++.+.|.|+++.+.
T Consensus 27 ~d~~GlD~Is~G~~ia~~~E~~e~Gll~~ed~g 59 (111)
T 1aor_A 27 CDELGLDTISTGGTLATAMELYEKGHIKDEELG 59 (111)
T ss_dssp HHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCC
T ss_conf 998595386555799999999977998756515
Done!