BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781072|ref|YP_003065485.1| hypothetical protein
CLIBASIA_04870 [Candidatus Liberibacter asiaticus str. psy62]
         (190 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781072|ref|YP_003065485.1| hypothetical protein CLIBASIA_04870 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040749|gb|ACT57545.1| hypothetical protein CLIBASIA_04870 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 190

 Score =  329 bits (844), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MGYSVSASNNDTSKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYG 60
           MGYSVSASNNDTSKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYG
Sbjct: 1   MGYSVSASNNDTSKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYG 60

Query: 61  AYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEIT 120
           AYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEIT
Sbjct: 61  AYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEIT 120

Query: 121 KAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFA 180
           KAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFA
Sbjct: 121 KAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFA 180

Query: 181 EKLEGKFVRK 190
           EKLEGKFVRK
Sbjct: 181 EKLEGKFVRK 190


>gi|71993010|ref|NP_001023349.1| Kinesin-Like Protein family member (klp-12) [Caenorhabditis
           elegans]
 gi|58081827|emb|CAB07273.2| C. elegans protein T01G1.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|58081863|emb|CAB05214.2| C. elegans protein T01G1.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1605

 Score = 41.2 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 33  INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYI---DFRTELKY 89
           I + +  K+ EL E+ +    +RD+V     K   + +  K + + + +   D R ELK 
Sbjct: 629 IRETYEKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKITDLRKELKK 688

Query: 90  FKALTKYYKSVVA----ELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKE 136
            +AL K +  V+A    EL+E    KS  E+ ++ KA   L +  NE KK+
Sbjct: 689 IEALDKEHLKVIAKSQRELQEKTRLKS--EVVDLKKAKVELIKKMNEDKKK 737


>gi|11559273|dbj|BAB18763.1| kinesin like protein KLP-12 [Caenorhabditis elegans]
          Length = 1609

 Score = 41.2 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 33  INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYI---DFRTELKY 89
           I + +  K+ EL E+ +    +RD+V     K   + +  K + + + +   D R ELK 
Sbjct: 633 IRETYEKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKITDLRKELKK 692

Query: 90  FKALTKYYKSVVA----ELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKE 136
            +AL K +  V+A    EL+E    KS  E+ ++ KA   L +  NE KK+
Sbjct: 693 IEALDKEHLKVIAKSQRELQEKTRLKS--EVVDLKKAKVELIKKMNEDKKK 741


>gi|193206546|ref|NP_001122796.1| Kinesin-Like Protein family member (klp-12) [Caenorhabditis
           elegans]
 gi|148472918|emb|CAN86621.1| C. elegans protein T01G1.1c, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|148472926|emb|CAN86600.1| C. elegans protein T01G1.1c, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1580

 Score = 40.8 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 33  INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYI---DFRTELKY 89
           I + +  K+ EL E+ +    +RD+V     K   + +  K + + + +   D R ELK 
Sbjct: 629 IRETYEKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKITDLRKELKK 688

Query: 90  FKALTKYYKSVVA----ELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKE 136
            +AL K +  V+A    EL+E    KS  E+ ++ KA   L +  NE KK+
Sbjct: 689 IEALDKEHLKVIAKSQRELQEKTRLKS--EVVDLKKAKVELIKKMNEDKKK 737


>gi|291460769|ref|ZP_06600159.1| putative nickase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291416728|gb|EFE90447.1| putative nickase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 475

 Score = 40.1 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 12/136 (8%)

Query: 4   SVSASNNDTSKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYD 63
           SVS        + D  + +   I+  E  I+++      +L ++A+K  K +D +Y AY 
Sbjct: 324 SVSELKESMVTLRDKNYKTTRTIKDTEKKIDEK-----TQLIDQAEKYLKHKD-IYKAYT 377

Query: 64  KVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAV 123
           K+  +K+        FY +   E+  F++  KY K  + E +   + K  +E+  + K  
Sbjct: 378 KLKKNKQD------TFYNEHTAEIILFESARKYLKEHLGESKSLNISKLKLEVTALKKEK 431

Query: 124 DTLTRAYNEYKKEIRE 139
           D+L     + +KE+ +
Sbjct: 432 DSLYSQIIDLRKEVEQ 447


>gi|268536404|ref|XP_002633337.1| C. briggsae CBR-KLP-12 protein [Caenorhabditis briggsae]
 gi|187034478|emb|CAP26295.1| CBR-KLP-12 protein [Caenorhabditis briggsae AF16]
          Length = 1874

 Score = 40.1 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 33   INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYI---DFRTELKY 89
            I   +  K+ EL E+ +    +RD+V     K   + +  K + + + +   D R ELK 
Sbjct: 910  IRDTYEKKLRELMERIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKISDLRKELKK 969

Query: 90   FKALTKYYKSVVA----ELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKE 136
             +AL + +  V+A    EL+E    KS  E+ ++ KA   L +  NE KK+
Sbjct: 970  IEALDREHLKVIAKSQRELQEKTRLKS--EVVDLKKAKVELIKKMNEDKKK 1018


>gi|227485075|ref|ZP_03915391.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236908|gb|EEI86923.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172]
          Length = 1174

 Score = 39.7 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query: 13   SKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVY 59
            SK P A F  F+Q   + S + + F    +ELYE+A+KA K R   Y
Sbjct: 1122 SKEPSASFQEFIQGEVRYSSLKRSFPETADELYEEAEKAAKARYNTY 1168


>gi|15614758|ref|NP_243061.1| aspartate aminotransferase [Bacillus halodurans C-125]
 gi|10174814|dbj|BAB05914.1| aspartate aminotransferase [Bacillus halodurans C-125]
          Length = 403

 Score = 38.9 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 90  FKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGF 149
           F ++ +Y  + V   R  G G + + ++ +   +DTLT+  +EYKK    +++   + GF
Sbjct: 271 FPSVEQYMAAFVFANRTLGFGNATVTVQRMISKMDTLTQEQHEYKKRRDAMVQVLEDAGF 330

Query: 150 D 150
           +
Sbjct: 331 E 331


>gi|71061468|ref|NP_001804.2| centromere-associated protein E [Homo sapiens]
 gi|160358869|sp|Q02224|CENPE_HUMAN RecName: Full=Centromere-associated protein E; AltName:
            Full=Centromere protein E; Short=CENP-E; AltName:
            Full=Kinesin-related protein CENPE; Flags: Precursor
 gi|119626576|gb|EAX06171.1| centromere protein E, 312kDa, isoform CRA_c [Homo sapiens]
 gi|225356542|gb|AAI56502.1| Centromere protein E, 312kDa [synthetic construct]
          Length = 2701

 Score = 38.5 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     K+ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K  V +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETVDKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|119626575|gb|EAX06170.1| centromere protein E, 312kDa, isoform CRA_b [Homo sapiens]
          Length = 2664

 Score = 38.5 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     K+ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K  V +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETVDKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|119626574|gb|EAX06169.1| centromere protein E, 312kDa, isoform CRA_a [Homo sapiens]
          Length = 2665

 Score = 38.5 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     K+ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K  V +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETVDKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|328868498|gb|EGG16876.1| actin binding protein [Dictyostelium fasciculatum]
          Length = 1786

 Score = 38.1 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 33  INKEFVTKVEELY----EKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELK 88
           +N E   K+E+      E + K  K+ +++ G +D+          L  A  ID+++   
Sbjct: 635 LNLEAAKKLEDELQIEKEYSLKVKKELEELIGQHDREKGETSRLHGLLSARDIDYQS--- 691

Query: 89  YFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF-IEL 147
               + ++  S   EL E  L     E EE   A+  L    ++++  I+EL+ +  +E+
Sbjct: 692 LVSKMDQFATSHAKELEELKLSLQTCE-EERKLALQQLQDTKSDHQSSIKELMNKHRLEI 750

Query: 148 GFDQCDECDLCSEKADVIQKKRIAFEMVEREFAEKLE 184
              Q  EC +C++K   I +  +  +  ER F E+++
Sbjct: 751 DEIQIQECVICNDKQLEISRLIVNLDEKERGFIEEMD 787


>gi|227485074|ref|ZP_03915390.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236907|gb|EEI86922.1| pyruvate synthase [Anaerococcus lactolyticus ATCC 51172]
          Length = 1175

 Score = 38.1 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 13   SKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSS 67
            SK P   F  F+Q   + S + + F    +ELY++A+KA K+R   Y +Y K+++
Sbjct: 1123 SKEPTGSFQEFIQGEVRYSSLKRSFPETADELYQEAEKAAKER---YESYKKLAN 1174


>gi|296242083|ref|YP_003649570.1| hypothetical protein Tagg_0343 [Thermosphaera aggregans DSM 11486]
 gi|296094667|gb|ADG90618.1| hypothetical protein Tagg_0343 [Thermosphaera aggregans DSM 11486]
          Length = 426

 Score = 38.1 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 41  VEELYEKAQK----AHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKY 96
           V+E+ EKA K    AH    K++      S   KSP+ELS       R+ LK+F  ++ +
Sbjct: 10  VKEIMEKAVKSELLAHPHVKKLWELSGDKSLFTKSPEELSSLRRDLLRSSLKFFAEMSDF 69

Query: 97  YKSVVAELREFGLGKSAIEIEEITK 121
           Y+ +       G+   + E+E++ K
Sbjct: 70  YEEL---FNRIGIDPGSAELEDLVK 91


>gi|309367027|emb|CAP20393.2| hypothetical protein CBG_23571 [Caenorhabditis briggsae AF16]
          Length = 1136

 Score = 37.8 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 32  VINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYID--------F 83
           V+NKE   ++++  E+  + H+K +KV  A  K     KS +EL+  + +D         
Sbjct: 640 VLNKE---ELQKFRERLDEEHQKAEKVREAEKKYLDAMKSTRELTDTYKMDVERLNGAVL 696

Query: 84  RTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVD 124
           RTEL + K L K+ K    +  E GL +S   IE   +  D
Sbjct: 697 RTELAHRKRLAKHLKEDPKKYTE-GLIESVYGIEVNNRQFD 736


>gi|268567508|ref|XP_002647798.1| Hypothetical protein CBG23571 [Caenorhabditis briggsae]
          Length = 857

 Score = 37.8 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 32  VINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYID--------F 83
           V+NKE   ++++  E+  + H+K +KV  A  K     KS +EL+  + +D         
Sbjct: 368 VLNKE---ELQKFRERLDEEHQKAEKVREAEKKYLDAMKSTRELTDTYKMDVERLNGAVL 424

Query: 84  RTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVD 124
           RTEL + K L K+ K    +  E GL +S   IE   +  D
Sbjct: 425 RTELAHRKRLAKHLKEDPKKYTE-GLIESVYGIEVNNRQFD 464


>gi|317058831|ref|ZP_07923316.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R]
 gi|313684507|gb|EFS21342.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R]
          Length = 1009

 Score = 37.8 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 72  PKELSKAFYIDFRTELKYFKALTK--YYKSVVAELREFGLGKSAI-------EIEEITKA 122
           P ++ K  YID   E K F    +  YY  + A +RE GLGK+         E+ +IT  
Sbjct: 772 PDKIEKTIYIDMNVEHKKFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITSC 831

Query: 123 VDTLTRAYNEYKKEIRELIEEFIE 146
            +      +  KKE+  LIE+ +E
Sbjct: 832 PEVKNSYISSSKKEM--LIEQIVE 853


>gi|257465912|ref|ZP_05630223.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 1134

 Score = 37.8 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 72  PKELSKAFYIDFRTELKYFKALTK--YYKSVVAELREFGLGKSAI-------EIEEITKA 122
           P ++ K  YID   E K F    +  YY  + A +RE GLGK+         E+ +IT  
Sbjct: 897 PDKIEKTIYIDMNVEHKKFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITSC 956

Query: 123 VDTLTRAYNEYKKEIRELIEEFIE 146
            +      +  KKE+  LIE+ +E
Sbjct: 957 PEVKNSYISSSKKEM--LIEQIVE 978


>gi|257452288|ref|ZP_05617587.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R]
          Length = 1134

 Score = 37.8 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 72  PKELSKAFYIDFRTELKYFKALTK--YYKSVVAELREFGLGKSAI-------EIEEITKA 122
           P ++ K  YID   E K F    +  YY  + A +RE GLGK+         E+ +IT  
Sbjct: 897 PDKIEKTIYIDMNVEHKKFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITSC 956

Query: 123 VDTLTRAYNEYKKEIRELIEEFIE 146
            +      +  KKE+  LIE+ +E
Sbjct: 957 PEVKNSYISSSKKEM--LIEQIVE 978


>gi|325294834|ref|YP_004281348.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score = 37.8 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 22  SFLQIRSKESVINKEFVTKVE----ELYEKAQKAHKKRDKVYGAYDKVSSHKK--SPKEL 75
           S++  R KESV  +EF    E    EL E+ +K  K +  V  A +K  +HK      E 
Sbjct: 776 SYIPGREKESVFLEEFPLFCESPDGELLERWEKLMKVKSLVNKALEKARAHKMIGHSLEA 835

Query: 76  SKAFYID--FRTELKYFKALTKY-YKSVVAELREFGLGKS-AIEIEEITKAV 123
           S   Y+D   R  L+ +K L  Y + +  AE+++F    S ++  +EI K V
Sbjct: 836 SITVYVDGELREFLERYKELLPYIFITSGAEVKQFAAAPSCSVGDDEILKGV 887


>gi|315917068|ref|ZP_07913308.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690943|gb|EFS27778.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 1143

 Score = 37.8 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 11/84 (13%)

Query: 72  PKELSKAFYIDFRTELKYFKALTK--YYKSVVAELREFGLGKSAI-------EIEEITKA 122
           P ++ K  YID   E K F    +  YY  + A +RE GLGK+         E+ +IT  
Sbjct: 906 PDKIEKTIYIDMNVEHKKFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITSC 965

Query: 123 VDTLTRAYNEYKKEIRELIEEFIE 146
            +      +  KKE+  LIE+ +E
Sbjct: 966 PEVKNSYISSSKKEM--LIEQIVE 987


>gi|320580809|gb|EFW95031.1| DNA repair protein RAD50 [Pichia angusta DL-1]
          Length = 732

 Score = 37.8 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 25  QIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFR 84
           QIR  E+ +  E+ TK+ E+ + +++    + ++   Y  +   ++  KE     Y   +
Sbjct: 484 QIRQLETQLQSEYSTKLGEMTQLSRQIQSVKHELQRDYKDID--ERYTKE-----YASLQ 536

Query: 85  TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTL 126
           T+L     LT YYK++ + + EF      ++++EI + +D L
Sbjct: 537 TKLSMVTDLTTYYKAIDSAVMEF----HQVKMKEINRIIDEL 574


>gi|262281162|ref|ZP_06058944.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257393|gb|EEY76129.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 212

 Score = 37.4 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 31  SVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDF-RTELKY 89
           S  ++E   K+++ Y  ++ A  KRD+   A  K  ++++   +  +   I F R E++Y
Sbjct: 99  SARHRELDIKLKKAYSNSKTALIKRDQALLAIKKQINYQQEQLDQLQQDKILFKRQEMEY 158

Query: 90  FKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIEL 147
           F+      + V+ E  +  +  +   I  + + ++TLT+ YN    E   +IE   +L
Sbjct: 159 FRK-----REVIPERHKTLIENNLNNIYRVKQTIETLTKTYNRTNSEYENIIERLKKL 211


>gi|189461674|ref|ZP_03010459.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
 gi|189431646|gb|EDV00631.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136]
          Length = 597

 Score = 37.4 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 16/102 (15%)

Query: 89  YFKALTKYYKSVVAELREFGLGKSAIEIEE-ITKAVDTLTRAYNEYKKEIREL---IEEF 144
           Y+ A  K+YK+ VAEL E GL K   E +  + +    + R +     EIR L   + ++
Sbjct: 199 YYVAFDKHYKAEVAELMEKGLSKEEAEAQSPLMQEAREMLRKWEANDPEIRALWKKMNDW 258

Query: 145 IELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFAEKLEGK 186
           +  GFD+              +   ++F+ +  E    LEGK
Sbjct: 259 VYAGFDE------------TYKMMGVSFDKIYYESETYLEGK 288


>gi|330684666|gb|EGG96368.1| acetyltransferase, GNAT family [Staphylococcus epidermidis VCU121]
          Length = 176

 Score = 37.4 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 85  TELKYFKALTKYYKSVVAELREFGLGKSAIE-IEEITKAVDTLTRAYNEYKKEIRELIEE 143
           +E K + ALT    SV  ELR  GLGK+ ++ +EE  K+    T   +      RE    
Sbjct: 75  SEEKTYTALTVASLSVKKELRNQGLGKALVQAVEERAKSEGYTTIVVD------RE-TSY 127

Query: 144 FIELGFDQCDECDLCSEKADVIQKKRIAF 172
           F +LG+   +E DL SE  DV Q   + F
Sbjct: 128 FTQLGYQLANEYDLYSEDEDVTQPLLVKF 156


>gi|196008767|ref|XP_002114249.1| hypothetical protein TRIADDRAFT_27651 [Trichoplax adhaerens]
 gi|190583268|gb|EDV23339.1| hypothetical protein TRIADDRAFT_27651 [Trichoplax adhaerens]
          Length = 903

 Score = 37.4 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 25/121 (20%)

Query: 25  QIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFR 84
           +++  ES  N++ +++    YEK Q+   K  K+   Y++  +     KE+S        
Sbjct: 774 ELQDLESANNQKLMSE----YEKYQELQAKSQKMQEEYERQLNEMDESKEVS-------- 821

Query: 85  TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
                 + LT+YY++ + E       KS+ ++E+  +    LTR Y+E K++I E ++  
Sbjct: 822 -----LQDLTEYYENKLQE-------KSS-QLEQANEEQQQLTREYDETKRQIEEDVDRE 868

Query: 145 I 145
           I
Sbjct: 869 I 869


>gi|29865|emb|CAA78727.1| CENP-E [Homo sapiens]
          Length = 2663

 Score = 37.0 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     ++ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEIENLNLAQELHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K  V +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETVDKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|382658|prf||1819485A CENP-E protein
          Length = 2663

 Score = 37.0 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     ++ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEIENLNLAQELHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K  V +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETVDKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|257451737|ref|ZP_05617036.1| hypothetical protein F3_01639 [Fusobacterium sp. 3_1_5R]
 gi|317058296|ref|ZP_07922781.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313683972|gb|EFS20807.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 494

 Score = 37.0 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 13  SKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSP 72
           S + D  + +   I+  E   N +      EL ++++K  K RD  Y  Y K+   KKS 
Sbjct: 352 SALRDKNYKTTRAIKDTEKKTNDKV-----ELIDQSEKYLKHRD-TYKTYVKL---KKSK 402

Query: 73  KELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNE 132
           +E    FY +   E+  F++  KY K  + E +   + K  +E   + K  DTL     +
Sbjct: 403 QE---DFYNEHTAEIILFESARKYLKEHLGESKTLAISKWKLEATALKKEKDTLYSQILD 459

Query: 133 YKKEIRE 139
            +KE+ +
Sbjct: 460 MRKEVEQ 466


>gi|326485258|gb|EGE09268.1| hypothetical protein TEQG_08218 [Trichophyton equinum CBS 127.97]
          Length = 599

 Score = 37.0 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 55  RDKVYGAYDKVSSHKK--SPKELSKAFYIDFRTE--LKYFKALTKYYKSVVAELREFGLG 110
           RD +  A D+++      +P   S+   + + TE  L  F AL +  K  ++E+  F   
Sbjct: 82  RDLLAQATDEIAQEPNHGAPIHSSQFGIVRWSTEEKLALFSALARKGKGAISEIASFIGS 141

Query: 111 KSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKA 162
           KS IE+++    ++   R ++  +K+ R +    I    +  DEC L  E A
Sbjct: 142 KSRIEVQQYIMGLEQALREHHITEKKFRGITFSDIHAAAEISDECCLALENA 193


>gi|302508980|ref|XP_003016450.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
 gi|291180020|gb|EFE35805.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
          Length = 588

 Score = 37.0 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 86  ELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFI 145
           +L  F AL +  K  + E+  F   KS IE+++    ++   R ++  +K+ R +    I
Sbjct: 117 KLALFSALARKGKGAIPEIASFIGSKSRIEVQQYIMGLEQALRVHHITEKKFRAITFSDI 176

Query: 146 ELGFDQCDECDLCSEKA 162
               +  DEC L  EKA
Sbjct: 177 HAAAEISDECCLALEKA 193


>gi|123392888|ref|XP_001300313.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121881331|gb|EAX87383.1| hypothetical protein TVAG_452940 [Trichomonas vaginalis G3]
          Length = 1490

 Score = 37.0 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 22/98 (22%)

Query: 87   LKYFKALTK------YYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIREL 140
            L++ K LTK      + K V+  L +F +  S +++ ++++ V   ++ +NE   EI+  
Sbjct: 924  LEFDKNLTKLISKEFFVKMVLDSLNKFCIKNSVVKLSKLSEIVYKYSKIFNENLTEIKSA 983

Query: 141  IEEFIELGFDQCDECDLCSEKADVIQKKRIAFEMVERE 178
              EFIE                  I+K R+A E  ERE
Sbjct: 984  ATEFIE----------------QFIRKSRVASESDERE 1005


>gi|326469784|gb|EGD93793.1| hypothetical protein TESG_01326 [Trichophyton tonsurans CBS 112818]
          Length = 599

 Score = 37.0 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 55  RDKVYGAYDKVSSHKK--SPKELSKAFYIDFRTE--LKYFKALTKYYKSVVAELREFGLG 110
           RD +  A D+++      +P   S+   + + TE  L  F AL +  K  ++E+  F   
Sbjct: 82  RDLLAQATDEIAQEPNHGAPIHSSQFGIVRWSTEEKLALFSALARKGKGAISEIASFIGS 141

Query: 111 KSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKA 162
           KS IE+++    ++   R ++  +K+ R +    I    +  DEC L  E A
Sbjct: 142 KSRIEVQQYIMGLEQALREHHITEKKFRGITFSDIHAAAEISDECCLALENA 193


>gi|329764872|ref|ZP_08256463.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138658|gb|EGG42903.1| SMC domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 1152

 Score = 36.6 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 26/153 (16%)

Query: 25  QIRSKESVINKEFVTKVEELYEKAQK-------AHKKRDKVYGAYDKVSSHKKSPKEL-S 76
           ++ +K+S + K + T + E  +K  +        ++K+ ++ G YD++SS     +EL +
Sbjct: 777 RVNAKKSDLEKLYTTIMNEYRDKDSQLTAIQVEENRKQSQIKGLYDEISSLNSQHQELEN 836

Query: 77  KAFYIDFRTELKYFKALTKYYK---------SVVAELREFG--LGKSAIEIEEITKAVDT 125
           K   ++ R E K    +T   K         S + +L+E+   L   + + +E+TK +++
Sbjct: 837 KIKELEIRKESKTATLVTLREKEQELISTSGSSIGQLKEYDDKLKVLSEKDKELTKEINS 896

Query: 126 LTRAYNEYKKEIRELIEEFIEL-------GFDQ 151
           L R  +   +++R+LIE   +L       GFD+
Sbjct: 897 LERQSDSLTRDLRDLIENETKLQTLLTSFGFDK 929


>gi|308457870|ref|XP_003091296.1| CRE-KLP-12 protein [Caenorhabditis remanei]
 gi|308257401|gb|EFP01354.1| CRE-KLP-12 protein [Caenorhabditis remanei]
          Length = 937

 Score = 36.6 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 33  INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYI---DFRTELKY 89
           I + +  K+ EL  + +    +RD+V     K   + +  K + + + +   D R ELK 
Sbjct: 625 IRETYENKLRELMARIKDTETERDRVLNEGGKRGGNNEQMKAIKQEYELKISDLRKELKK 684

Query: 90  FKALTKYYKSVVA----ELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKE 136
            +AL K +  V+A    EL+E    KS  E+ ++ KA   L +  NE KK+
Sbjct: 685 IEALDKEHLKVIAKSQRELQEKTRLKS--EVVDLKKAKVELIKKMNEDKKK 733


>gi|114595515|ref|XP_001170168.1| PREDICTED: centromere protein E isoform 1 [Pan troglodytes]
 gi|114595517|ref|XP_001170275.1| PREDICTED: centromere-associated protein E isoform 2 [Pan
            troglodytes]
          Length = 2701

 Score = 36.2 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     K+ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEMENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K    +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETADKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|114595519|ref|XP_517376.2| PREDICTED: centromere protein E isoform 5 [Pan troglodytes]
 gi|114595521|ref|XP_001170294.1| PREDICTED: centromere protein E isoform 3 [Pan troglodytes]
          Length = 2665

 Score = 36.2 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 7/123 (5%)

Query: 28   SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKEL---SKAFYIDFR 84
            SK  + N     K+ E  E+ +   K+RD +    + +   +   KE    +KA  ++ +
Sbjct: 1864 SKLEMENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQ 1923

Query: 85   TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
             ELK  + L+K +K    +LRE  + +  I+I +I K +D   ++ +E +K+I+EL ++ 
Sbjct: 1924 QELKTARMLSKEHKETADKLRE-KISEKTIQISDIQKDLD---KSKDELQKKIQELQKKE 1979

Query: 145  IEL 147
            ++L
Sbjct: 1980 LQL 1982


>gi|283769219|ref|ZP_06342123.1| conserved domain protein [Bulleidia extructa W1219]
 gi|283104195|gb|EFC05574.1| conserved domain protein [Bulleidia extructa W1219]
          Length = 306

 Score = 36.2 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)

Query: 4   SVSASNNDTSKIPDAKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYD 63
           S+S    +   + D  + +   I+  E  I+        +L + A+K  K +D  Y AY 
Sbjct: 155 SLSELKENIVTLRDKNYKTTRTIKDTEKKIDDRV-----QLIDHAEKYLKHKD-TYKAYT 208

Query: 64  KVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAV 123
           K+  +K+        FY +   E+  F++  KY K  + E +   + K   EI  + K  
Sbjct: 209 KLKKNKQD------TFYNEHTAEIILFESAKKYLKEHLGESKTINISKWKSEIGTLRKEK 262

Query: 124 DTLTRAYNEYKKEIRE 139
           DTL     + +KE+ +
Sbjct: 263 DTLYSQITDIRKEVEQ 278


>gi|194671953|ref|XP_612396.4| PREDICTED: A-kinase anchor protein 11 [Bos taurus]
 gi|297480991|ref|XP_002691818.1| PREDICTED: A kinase (PRKA) anchor protein 11 [Bos taurus]
 gi|296481877|gb|DAA23992.1| A kinase (PRKA) anchor protein 11 [Bos taurus]
          Length = 1905

 Score = 36.2 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)

Query: 91   KALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGFD 150
            +A+ +Y   VV +  E GLG +   + E TKAVD +T     Y +++  L+ +       
Sbjct: 1542 QAIEQYANKVVGDTLELGLGSATFHVSEATKAVDRIT-----YAEKLSPLVGQ------- 1589

Query: 151  QCDECD 156
             C  CD
Sbjct: 1590 ACRSCD 1595


>gi|153954813|ref|YP_001395578.1| transcriptional regulator [Clostridium kluyveri DSM 555]
 gi|146347671|gb|EDK34207.1| Transcriptional regulator [Clostridium kluyveri DSM 555]
          Length = 281

 Score = 36.2 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 75  LSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEE------ITKAVDTLTR 128
           L K  Y+D +T  +Y+  L       + ELR+  LG S  EI+E      +TK++  LT 
Sbjct: 32  LFKPTYVDPKTGYRYYSVLQYEKLGTIKELRQ--LGMSLKEIKEYFNNRHVTKSLSILTN 89

Query: 129 AYNEYKKEIREL 140
            + E K++I++L
Sbjct: 90  KHEELKEKIKDL 101


>gi|302661475|ref|XP_003022405.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
 gi|291186348|gb|EFE41787.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
          Length = 593

 Score = 36.2 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 86  ELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFI 145
           +L  F AL +  K  + E+  F   KS IE+++    ++   R ++  +K+ R +    I
Sbjct: 117 KLALFSALARKGKGAIPEIASFIGSKSRIEVQQYIMGLEQALREHHITEKKFRGITFSDI 176

Query: 146 ELGFDQCDECDLCSEKA 162
               +  DEC L  EKA
Sbjct: 177 HAAAEISDECCLALEKA 193


>gi|219855273|ref|YP_002472395.1| hypothetical protein CKR_1930 [Clostridium kluyveri NBRC 12016]
 gi|219568997|dbj|BAH06981.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 294

 Score = 36.2 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 75  LSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEE------ITKAVDTLTR 128
           L K  Y+D +T  +Y+  L       + ELR+  LG S  EI+E      +TK++  LT 
Sbjct: 45  LFKPTYVDPKTGYRYYSVLQYEKLGTIKELRQ--LGMSLKEIKEYFNNRHVTKSLSILTN 102

Query: 129 AYNEYKKEIREL 140
            + E K++I++L
Sbjct: 103 KHEELKEKIKDL 114


>gi|146416945|ref|XP_001484442.1| hypothetical protein PGUG_03823 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 797

 Score = 35.8 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 8/104 (7%)

Query: 88  KYFKALTKYYKSVVAELREFGLGKSAIEIE--EITKAVDTLTRAYNEYKKEIRELIEE-- 143
           K  +A  K   +  +++    + K  +E E  E+ + +D+L   YNE K E+  L+EE  
Sbjct: 104 KQLEASEKSVDAAESKIEMLSVDKEVLETENEELRQELDSLHVKYNELKLELEALMEESE 163

Query: 144 ----FIELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFAEKL 183
                 +L   Q D  DL  E+  +I  K  A E    + +EKL
Sbjct: 164 LNRQLEQLVSAQVDVSDLSEEEIKLILVKNKALEQKLEDNSEKL 207


>gi|290968471|ref|ZP_06560010.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781467|gb|EFD94056.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 862

 Score = 35.8 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 15/120 (12%)

Query: 28  SKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTEL 87
           +K++  NK++  K+E L ++    + K  KVYG  DK        + +   +  +F  EL
Sbjct: 458 NKQTSYNKDY-NKIEYLVKQVNVTYSKVKKVYGEIDK-------NQFILSDYTSEFNGEL 509

Query: 88  KYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIEL 147
             F  +    K+++  +        + EIE I K  ++L    +E+ K+++ L EEF  +
Sbjct: 510 --FGNINDILKNILTAINNI-----SAEIETIAKNENSLRTIKDEFDKDMKSLKEEFASI 562


>gi|332799906|ref|YP_004461405.1| UvrD/REP helicase [Tepidanaerobacter sp. Re1]
 gi|332697641|gb|AEE92098.1| UvrD/REP helicase [Tepidanaerobacter sp. Re1]
          Length = 970

 Score = 35.8 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 114 IEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKADVIQ 166
           +E+E + K +D L R Y+E    +RE +EE  + G++Q +  D+ SE+ DV++
Sbjct: 536 LEVENVFKFLD-LCRDYDEQGYTLREFLEELSDFGWEQQEAIDV-SEEEDVVK 586


>gi|148270224|ref|YP_001244684.1| CRISPR-associated RAMP Csm4 family protein [Thermotoga petrophila
           RKU-1]
 gi|170288807|ref|YP_001739045.1| CRISPR-associated RAMP Csm4 family protein [Thermotoga sp. RQ2]
 gi|147735768|gb|ABQ47108.1| CRISPR-associated protein, Csm4 family [Thermotoga petrophila
           RKU-1]
 gi|170176310|gb|ACB09362.1| CRISPR-associated RAMP protein, Csm4 family [Thermotoga sp. RQ2]
          Length = 285

 Score = 35.8 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 17/151 (11%)

Query: 2   GYSVSASNNDTSKIP----DAKFGSFLQIRSKESVINKEFVTKVEE---LYEKAQKAHKK 54
           G+ V   N   S +P    D  +G+ +    K S   ++F  K++    L+ +  +    
Sbjct: 8   GFRVGRGNETDSTLPTIHSDTIYGAVVYHAFKWSEKAEDFARKLKVSSLLFVRGDRLLVP 67

Query: 55  RDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAI 114
           +  +Y  Y      ++SPKEL KA Y+ F  +L  ++++ K   +V  E        + +
Sbjct: 68  KPFLYNTYSLEEDDEESPKELKKASYV-FLDKLANYQSIKKASGAVCKE--------NPV 118

Query: 115 EIEEITK-AVDTLTRAYNEYKKEIRELIEEF 144
           EI  I + ++D +T + N Y  E+  + E F
Sbjct: 119 EIVRIPRNSLDRITSSSNLYFVEVAFVKEGF 149


>gi|156093824|ref|XP_001612950.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148801824|gb|EDL43223.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1074

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 12/126 (9%)

Query: 40  KVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKY--FKALTKYY 97
           K+ ++ EK  +   K  +    YDK   H   P E+    + +F+T  KY   K  T YY
Sbjct: 847 KMAKIVEKYAEEIPKDSERSLRYDK-EEHIDDPDEMDDLLFGEFKTLEKYGTHKTSTFYY 905

Query: 98  KSVVAE--LREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRE-------LIEEFIELG 148
           +    +  LR+F +     E+EE+ +  + L+  +  Y+ E  +       L+E+F+EL 
Sbjct: 906 EMTCFDERLRDFEINTKLKEMEEVPEKWELLSLYWQSYRNERHKYLAVKKYLLEKFLELK 965

Query: 149 FDQCDE 154
            +Q  E
Sbjct: 966 TNQSTE 971


>gi|290994729|ref|XP_002679984.1| predicted protein [Naegleria gruberi]
 gi|284093603|gb|EFC47240.1| predicted protein [Naegleria gruberi]
          Length = 1593

 Score = 35.4 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 17/169 (10%)

Query: 33  INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKA 92
           INK F+  ++ L+E A++      +      ++  + K   ++++      R +    K 
Sbjct: 425 INKSFIVHLDSLFEVARQVFSTCVERGVIIQRIHIYFKEFFDITRTLLQGERKKSTELKK 484

Query: 93  LTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIREL------------ 140
           +   Y+ VV E+ +  L K   E+E +     T+     E+KK+I ++            
Sbjct: 485 VINQYEKVVKEVSDEKL-KMKQELETLLTKSATIVSENEEFKKKISQIPQYEVVMNLIQN 543

Query: 141 ---IEEFI-ELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFAEKLEG 185
               EEF+ + G D  DE  +  +K  V  KKR+A +  +   A+ + G
Sbjct: 544 KKKWEEFVNDGGEDLFDEDGVGGDKKGVTPKKRMAKQRSQNGEADSVSG 592


>gi|190347455|gb|EDK39725.2| hypothetical protein PGUG_03823 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 797

 Score = 35.4 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 88  KYFKALTKYYKSVVAELREFGLGKSAIEIE--EITKAVDTLTRAYNEYKKEIRELIEE-- 143
           K  +A  K   +  +++    + K  +E E  E+ + +D+L   YNE K E+  L+EE  
Sbjct: 104 KQLEASEKSVDAAESKIEMLSVDKEVLETENEELRQELDSLHVKYNELKSELEALMEESE 163

Query: 144 ----FIELGFDQCDECDLCSEKADVIQKKRIAFEMVEREFAEKL 183
                 +L   Q D  DL  E+   I  K  A E    + +EKL
Sbjct: 164 LNRQLEQLVSAQVDVSDLSEEEIKSILVKNKALEQKLEDNSEKL 207


>gi|331703101|ref|YP_004399788.1| hypothetical protein MLC_0810 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801656|emb|CBW53809.1| Hypothetical protein, predicted lipoprotein [Mycoplasma mycoides
           subsp. capri LC str. 95010]
          Length = 563

 Score = 35.4 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 25  QIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFR 84
           +IR  E+ +NK   + +E+L +   KA K R+ +      ++  K   +E+ K  ++   
Sbjct: 387 EIRKIEADLNKLKQSTIEKLTKDNNKAEKARNDLPSLESSLNKMKTEKEEIDKHLHLIND 446

Query: 85  TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEF 144
              K  K LT+Y K+V         G    EIE+ TK+    T+   EY+ ++ +L+ E 
Sbjct: 447 QVSKDKKYLTEYKKNV---------GLLEEEIEQATKSESYWTKTLKEYEADLNKLLAEK 497

Query: 145 IEL 147
            E+
Sbjct: 498 SEI 500


>gi|157871447|ref|XP_001684273.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68127341|emb|CAJ05669.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 827

 Score = 35.4 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 19/180 (10%)

Query: 17  DAKFGSFLQIRSKESV-----INKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKS 71
           D  F  F   RS+E +      N     +VEE  ++A+K HK R  +        + +  
Sbjct: 130 DLDFARFELTRSQEEMKLLRASNHNLKNEVEEYVQRAEKEHKARMSLEAKMSAEGATRTE 189

Query: 72  PKELSKAFYIDFRTE-LKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAY 130
             E  K    + R E  K    +T+  +       EF     ++  EE+  A + L R  
Sbjct: 190 EIEFLKKTIDELRAENAKRLDYMTQQQED------EFQARLQSMR-EELAGAAEELARLT 242

Query: 131 NE--YKKEIRELIEEFIELGFDQCDE----CDLCSEKADVIQKKRIAFEMVEREFAEKLE 184
            E    ++ REL E  +       ++     D C  + D +QK+  A E   R+F ++ E
Sbjct: 243 AEAAQAQKARELSESKLTAALTDLEKSRAVVDDCKARIDALQKECHALEQQHRDFVQQQE 302


>gi|154250244|ref|YP_001411069.1| exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1]
 gi|154154180|gb|ABS61412.1| Exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1]
          Length = 495

 Score = 35.4 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 17/138 (12%)

Query: 13  SKIPDAKFGSFLQI-RSKESVINKEFVTKVEELYEK-AQKAHKKRDKVYGAYDKVSSHKK 70
           +K+ D  + +  +I R K   + +E +   E LY++ + K ++K   +    +     K 
Sbjct: 324 AKLSDTNYKTVKEIFRGKIQSVEEELIDSAEVLYKRFSLKEYEKMISMDFIKNLSEKMKY 383

Query: 71  SPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAY 130
              E SK   +D+           KY K  +    E  +     ++E  TK  DTL + Y
Sbjct: 384 DISEFSKKLMLDY-----------KYLKDTL----ELKINNINQQVERYTKLSDTLEKEY 428

Query: 131 NEYKKEIRELIEEFIELG 148
           +     + E  EEF+++G
Sbjct: 429 SNLSNLVEEKKEEFVKIG 446


>gi|28211476|ref|NP_782420.1| signaling protein [Clostridium tetani E88]
 gi|28203917|gb|AAO36357.1| signaling protein [Clostridium tetani E88]
          Length = 449

 Score = 35.4 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 83  FRTELKYFKALTKYYKSVVAELREFGLGKSAIEIE----EITKAVDTLTRAYNEY 133
           F  E +Y+K + KYY +++ E +E  + K+ +E E    E     D LT  YN Y
Sbjct: 245 FVFEKRYYKIINKYYNTIIREKQELVMEKTKVENEYKRLESIAITDPLTNLYNRY 299


>gi|225848205|ref|YP_002728368.1| hypothetical protein SULAZ_0374 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644704|gb|ACN99754.1| hypothetical protein SULAZ_0374 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 382

 Score = 35.4 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 54/117 (46%)

Query: 24  LQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDF 83
           ++I  KE+      +  +EE  ++ + A+K   ++Y     + +  KS +    AF +  
Sbjct: 199 IEIILKEAEKQSPVLKSLEETLKRDRFAYKLAKEIYYPDVSIGTTYKSKERFQDAFSVSV 258

Query: 84  RTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIREL 140
              L +    T + + +V E + F + +   +I+ +      LT  YNEYK  +++L
Sbjct: 259 NLNLNFPFWRTLHQEQIVLERKLFVIAQEEQKIQTLNNLKTQLTTFYNEYKYNLQKL 315


>gi|327303794|ref|XP_003236589.1| hypothetical protein TERG_03634 [Trichophyton rubrum CBS 118892]
 gi|326461931|gb|EGD87384.1| hypothetical protein TERG_03634 [Trichophyton rubrum CBS 118892]
          Length = 588

 Score = 35.1 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 55  RDKVYGAYDKVSSHKK--SPKELSKAFYIDFRTE--LKYFKALTKYYKSVVAELREFGLG 110
           RD +  A D+++      +P   S+   + + TE  L  F AL +  K  ++E+      
Sbjct: 82  RDLLIQATDEIAQEPNHGAPIHSSQFGIVRWSTEEKLALFSALARKGKGAISEIASSIGS 141

Query: 111 KSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEKA 162
           KS IE+++    ++   R ++  +K+ R +    I    +  DEC L  EKA
Sbjct: 142 KSRIEVQQYIMGLEQALREHHLTEKKFRCITFSDIHAAAEISDECCLALEKA 193


>gi|253741491|gb|EES98360.1| Kinesin-2 [Giardia intestinalis ATCC 50581]
          Length = 718

 Score = 35.1 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 32/174 (18%)

Query: 22  SFLQIRSKESVI-NKEFVTKVEEL----YEKAQKAHKKRDKVYGAYDKVSSHKKSPKELS 76
           +   ++S+ S I N  FV K  E+     +KAQ+    R + + A  +   HK++  +  
Sbjct: 470 TLTDLKSQLSAIKNSVFVVKQLEIKNKVLDKAQQKLTTRQEKHNALQQALQHKQNEHQTK 529

Query: 77  KAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAY----NE 132
            A  +    +L+ FKA                + K+  EI E+ + +D +T  +     E
Sbjct: 530 TAEVLSAVEKLERFKA---------------DIAKTEAEINEVNQEIDDITEQHALSIEE 574

Query: 133 YKKEIRE------LIEEFIELGFDQCD--ECDLCSEKADVIQKKRIAFEMVERE 178
            ++E++E      L++  I+    QC+  + +  +E  +   K  I+ E V++E
Sbjct: 575 ERRELKEVDKRSALLDAIIQAFIPQCEVTKAEALAEYDEEAMKWVISPEKVDKE 628


>gi|147919772|ref|YP_686482.1| hypothetical protein RCIX1999 [uncultured methanogenic archaeon
           RC-I]
 gi|110621878|emb|CAJ37156.1| hypothetical protein RCIX1999 [uncultured methanogenic archaeon
           RC-I]
          Length = 1632

 Score = 35.1 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 26  IRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRT 85
           +R+  S I +   T++ +  E      +  D      +K+    +    LSKA  +D+R+
Sbjct: 795 VRADVSSIREMTRTEMADFKEAFGSDIRAFDGYRDDLNKLRDSMEQVNSLSKAV-MDYRS 853

Query: 86  ELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRELIEEFI 145
           ELK  K + + +   V + REF  G+     EEI +  D   R Y    K IRE+I    
Sbjct: 854 ELKSIKGMVEKFAEDVKQAREFAKGR-----EEILRLKDEF-RLYTNDIKTIREIIG--- 904

Query: 146 ELGFDQCDECDLCSEKAD 163
               DQ DE +   +  D
Sbjct: 905 ----DQKDELNAVKKTLD 918


>gi|157126101|ref|XP_001654536.1| set domain protein [Aedes aegypti]
 gi|108873380|gb|EAT37605.1| set domain protein [Aedes aegypti]
          Length = 1480

 Score = 34.7 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 18  AKFGSFLQIRSKESVINKEFVTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSK 77
           AK  S ++ R+K SV         EE YE  +K  + R     AY+ +     S + LSK
Sbjct: 587 AKAKSTVRRRTK-SVSLGYHSNSFEESYESGRKRQRSRTPESPAYEALPLSSNSTESLSK 645

Query: 78  AFYIDFRTELKYFKALTKYYKSVV--AELREFGLGKSAIEIEEITKAVDTLTRAYNEY 133
              ++   +  +   +++Y++S+   +++ +   G S+ E E+IT+ ++     YN +
Sbjct: 646 RIKLETNEQDLFRNTISRYFQSMAEGSDVVDTASGTSS-ECEDITEMLEFDKEIYNNF 702


>gi|255087754|ref|XP_002505800.1| predicted protein [Micromonas sp. RCC299]
 gi|226521070|gb|ACO67058.1| predicted protein [Micromonas sp. RCC299]
          Length = 1616

 Score = 34.7 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 63  DKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKA 122
           D+V+++ +   +L +A  ++   E+     ++K  +  +AEL E GLG+   +++     
Sbjct: 104 DRVAAYSRK-MQLIRAGDLNAAAEISTV-GVSKQVREAIAELEEDGLGRDVADVDTTADR 161

Query: 123 VDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSEK 161
           V   T +  E     R+LI  F+     +C+ C  CS K
Sbjct: 162 VVWTTNSMVES----RDLIRNFLASVPAKCENCGCCSPK 196


>gi|160879186|ref|YP_001558154.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           phytofermentans ISDg]
 gi|160427852|gb|ABX41415.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           phytofermentans ISDg]
          Length = 489

 Score = 34.7 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 38  VTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYY 97
           V+ V +++   Q      +++  A +  SS  +   E+++    D +  +KY K++++  
Sbjct: 281 VSSVGDIHNSMQGIKLAANEISSAMETSSSDAQRLTEMTQEVSKDAQESVKYSKSISEID 340

Query: 98  KSVVAELREF--GL--GKSAIEIEEITKAVDTLTRAYNEYKKEIRELIE 142
             +  E+RE   GL  G  A+  EE+   ++   +A++E+   ++ +++
Sbjct: 341 DRLSHEIREMFEGLSTGNQAVTNEELQLVIEKAVKAHSEWMVNLKNIVD 389


>gi|253581922|ref|ZP_04859146.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725]
 gi|251836271|gb|EES64808.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725]
          Length = 926

 Score = 34.7 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 69  KKSPKELSKAFYIDFRTELK--YFKALTKYYKSVVAELREFGLGKSAI-------EIEEI 119
           K  P ++ K  +I+   E K  Y +  + YYK V +++RE G+GK+         E+ +I
Sbjct: 686 KDLPDKIEKTMFIEMNVEQKKLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQI 745

Query: 120 TKAVDTLTRAYNEYKKEIRELIEEFIE 146
           T   +  +      K+E+  L+   +E
Sbjct: 746 TSCPEAKSNGVTSSKREV--LVNNIVE 770


>gi|15644552|ref|NP_229605.1| hypothetical protein TM1808 [Thermotoga maritima MSB8]
 gi|4982389|gb|AAD36871.1|AE001818_6 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 292

 Score = 34.3 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 2   GYSVSASNNDTSKIP----DAKFGSFLQIRSKESVINKEFVTKVEE---LYEKAQKAHKK 54
           G+ V   N   S +P    D  +G+ +    K S   ++F  K++    L+ +  +    
Sbjct: 15  GFRVGRGNETDSTLPTIHSDTIYGAVVYHAFKWSEKAEDFAKKLKVSSLLFVRGDRLLVP 74

Query: 55  RDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYYKSVVAELREFGLGKSAI 114
           +  +Y  Y      ++SPKEL KA Y+ F  +L  ++++ +   +V  E        + +
Sbjct: 75  KPFLYNTYSLEEDDEESPKELKKASYV-FLDKLADYRSIKEASGAVCKE--------NPV 125

Query: 115 EIEEITK-AVDTLTRAYNEYKKEIRELIEEFIELGF 149
           EI  I + ++D +T + N Y  E+      F++ GF
Sbjct: 126 EIVRIPRNSLDRITSSSNLYFVEV-----AFVKEGF 156


>gi|222475702|ref|YP_002564223.1| hypothetical protein Hlac_2766 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222454073|gb|ACM58337.1| hypothetical protein Hlac_2766 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 782

 Score = 34.3 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 119 ITKAVDTLTRAYNEYKKEIRELIEEFIELGFDQCDECDLCSE 160
           +T AVDT  R +++  +E R L+ EFIE+      EC  C E
Sbjct: 330 LTGAVDTYIRYFDDLPEEERSLLNEFIEVSEIDTFECYRCHE 371


>gi|317063195|ref|ZP_07927680.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185]
 gi|313688871|gb|EFS25706.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185]
          Length = 926

 Score = 34.3 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 69  KKSPKELSKAFYIDFRTELK--YFKALTKYYKSVVAELREFGLGKSAI-------EIEEI 119
           K  P ++ K  +I+   E K  Y +  + YYK V +++RE G+GK+         E+ +I
Sbjct: 686 KDLPDKIEKTMFIEMNAEQKKLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQI 745

Query: 120 TKAVDTLTRAYNEYKKEIRELIEEFIE 146
           T   +  +      K+E+  L+   +E
Sbjct: 746 TSCPEAKSNGVTSSKREV--LVNNIVE 770


>gi|257468947|ref|ZP_05633041.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185]
          Length = 915

 Score = 34.3 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 69  KKSPKELSKAFYIDFRTELK--YFKALTKYYKSVVAELREFGLGKSAI-------EIEEI 119
           K  P ++ K  +I+   E K  Y +  + YYK V +++RE G+GK+         E+ +I
Sbjct: 675 KDLPDKIEKTMFIEMNAEQKKLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQI 734

Query: 120 TKAVDTLTRAYNEYKKEIRELIEEFIE 146
           T   +  +      K+E+  L+   +E
Sbjct: 735 TSCPEAKSNGVTSSKREV--LVNNIVE 759


>gi|149194280|ref|ZP_01871377.1| RNA polymerase sigma factor RpoD [Caminibacter mediatlanticus TB-2]
 gi|149135455|gb|EDM23934.1| RNA polymerase sigma factor RpoD [Caminibacter mediatlanticus TB-2]
          Length = 604

 Score = 34.3 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 15/115 (13%)

Query: 28  SKESVINKEFV---TKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFR 84
           +KE   NK+      ++ EL++  +KA K+ +KV   YD++      P++          
Sbjct: 178 TKEGKKNKKISLREKRINELFKNLEKAKKEWEKVIDEYDRILKDTSMPED---------- 227

Query: 85  TELKYFKALTKYYKSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKKEIRE 139
             L     LT   K V   L E  LG ++  I EI K V+T  +   +++KE+++
Sbjct: 228 ERLHKILQLTFKKKKVKDALNE--LGYTSKLINEIVKTVETALKGDKDFEKELKK 280


>gi|323704403|ref|ZP_08115982.1| chromosome segregation ATPase-like protein [Thermoanaerobacterium
            xylanolyticum LX-11]
 gi|323536469|gb|EGB26241.1| chromosome segregation ATPase-like protein [Thermoanaerobacterium
            xylanolyticum LX-11]
          Length = 1389

 Score = 33.9 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 22/98 (22%)

Query: 38   VTKVEELYEKAQKAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYY 97
            +T ++++Y+ A+    +  +++  +DK S+ +K    +  AFY+                
Sbjct: 1002 LTDIDDMYKAAKTIQSQYKEMFAKFDKDSATEK----IRNAFYV---------------- 1041

Query: 98   KSVVAELREFGLGKSAIEIEEITKAVDTLTRAYNEYKK 135
               + EL E+GL    +EIE+    +DT    Y + ++
Sbjct: 1042 --CINELVEYGLSLDVVEIEQTDTDIDTYQEIYKDLRR 1077


>gi|293401347|ref|ZP_06645490.1| putative phage minor capsid protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304985|gb|EFE46231.1| putative phage minor capsid protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 594

 Score = 33.9 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)

Query: 50  KAHKKRDKVYGAYDKVSSHKKSPKELSKAFYIDFRTELKYFKALTKYY------KSVVAE 103
           K   +R+K+YG   K+SS  ++  E S    ID RT L+  KALTK Y      K +V+E
Sbjct: 370 KRQSRREKIYGTDSKISSKLQNFDE-SSLKDIDERTILEVDKALTKIYEDYPHMKGIVSE 428

Query: 104 LREFGLGKSAIEIE 117
           ++    G +  E++
Sbjct: 429 VKLVEKGTAVAELD 442


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.315    0.132    0.356 

Lambda     K      H
   0.267   0.0414    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,344,299,256
Number of Sequences: 14124377
Number of extensions: 43178059
Number of successful extensions: 174080
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 173984
Number of HSP's gapped (non-prelim): 191
length of query: 190
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 59
effective length of database: 2,992,500,243
effective search space: 176557514337
effective search space used: 176557514337
T: 11
A: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 77 (34.3 bits)