HHsearch alignment for GI: 254781073 and conserved domain: COG0408
>COG0408 HemF Coproporphyrinogen III oxidase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=908.49 Aligned_cols=272 Identities=47% Similarity=0.902 Sum_probs=264.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEE
Q ss_conf 66999999999999999999999999630102222344566512521231788888777504899505946536887776
Q gi|254781073|r 13 DIEERKRISQRKFENLQSIICTEFEKLENEAHENSANRSPKIFTVKHWLRDKSQKEDLGGGRMATLCAGKVFEKAAVLVS 92 (307)
Q Consensus 13 ~ie~kk~~~~~wF~~LQd~Ic~~fE~lE~~~~~~~~~~~~~~F~~d~W~R~~g~~~~~GGG~s~VL~~G~VFEKaGVNfS 92 (307)
T Consensus 2 ~~~~~~~~~~~~~~~Lqd~Ic~~le~~dg~~----------~F~~d~W~r~~g~----GgG~~~vl~~G~vFEk~GVn~S 67 (303)
T COG0408 2 DIEPDKQAVKAWLLNLQDEICAALEALDGEA----------KFVEDSWQREEGG----GGGRSRVLMDGAVFEKGGVNFS 67 (303)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE----------EEECCCCCCCCCC----CCCEEEEEECCCEEEECCCEEE
T ss_conf 8522899999999999999999998526640----------6740322246898----8872588722734663372158
Q ss_pred EEECCCHHHHHHHHHHCCCCCCCEEECEEEEEECCCCCCCHHHCCHHHEEECC------CCCCCCCCCCCCCCHHHCCCH
Q ss_conf 30035426776421110267651000002233136887440102302102024------312532001100000110432
Q gi|254781073|r 93 TVYGDLSPDFKDQILGTTKNPYFWATGLSVIVHPYNPHVPAVHFNIRMIVTGA------YWFGGGIDLTPSLESRRHSYD 166 (307)
Q Consensus 93 ~V~G~~~p~~a~~i~g~~~~~~F~AtGiS~V~Hp~nP~vPt~H~N~R~f~~~~------~WFGGG~DLTP~~~~~~y~~~ 166 (307)
T Consensus 68 ~V~G~~~P~~~~~~rp~~~g~~F~A~GiSlV~HP~NP~vPt~H~N~R~f~a~~~~~~~vwWFGGG~DLTP~-----y~~~ 142 (303)
T COG0408 68 TVFGEFSPESATAMRPELAGRRFFATGISLVAHPKNPYVPTVHLNVRYFEAEKPGAEPVWWFGGGADLTPY-----YGFE 142 (303)
T ss_pred EEECCCCCHHHHHCCCHHCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCC-----CCCH
T ss_conf 87446680787638830028863653116997258999874231478999745888754565477567545-----6623
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67999999998403656733428999976787434532521234301010147866658967799999999999999999
Q gi|254781073|r 167 PDVIFFHNTLKEMCSQHAVANYTHYKEWCDRYFYLPHRQESRGIGGIFFDHLHSSPEMGGIDADFSFISAVGDCFIKLYP 246 (307)
Q Consensus 167 eD~~~fH~~~k~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFFD~l~~~~~~~~~e~~f~f~~~vg~~fl~~y~ 246 (307)
T Consensus 143 eD~~hfH~~~k~aC~~~~~~~YprfK~WCDeYFyLkHR~E~RGiGGiFfD~l~~~----~~~~~Faf~qdvG~afl~aY~ 218 (303)
T COG0408 143 EDAVHFHRAAKDACDPHGPEDYPRFKKWCDEYFYLKHRNEPRGIGGIFFDDLNEP----DFERDFAFTQDVGKAFLPAYL 218 (303)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCCCCCC----CHHHHHHHHHHHHHHHHHHHH
T ss_conf 6779999999997531782340688876355433014677777650531335678----989989999998777766437
Q ss_pred HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCC
Q ss_conf 9998754799998999885420240112211110255357357888111411288878897
Q gi|254781073|r 247 SLVRRNYHHLFSEQDRQEQLIRRGRYAEFNLLYDKGTNFGFKTGGNVESILASMPPLVAWP 307 (307)
Q Consensus 247 ~Iv~~r~~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t~gr~esIl~SlPp~~~Wp 307 (307)
T Consensus 219 pIV~~r~~~~~te~er~fQl~RRGRYVEFNLvyDRGT~FGLqTgGr~ESILmSlPP~vrW~ 279 (303)
T COG0408 219 PIVERRKNMPWTEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRVESILMSLPPLVRWE 279 (303)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCHHHHHHCCCCCCCCC
T ss_conf 9998743899865677788886153379998874463675126973655764299534256