HHsearch alignment for GI: 254781073 and conserved domain: pfam01218

>pfam01218 Coprogen_oxidas Coproporphyrinogen III oxidase.
Probab=100.00  E-value=0  Score=917.82  Aligned_cols=264  Identities=44%  Similarity=0.858  Sum_probs=256.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCH
Q ss_conf             99999999999999999996301022223445665125212317888887775048995059465368877763003542
Q gi|254781073|r   20 ISQRKFENLQSIICTEFEKLENEAHENSANRSPKIFTVKHWLRDKSQKEDLGGGRMATLCAGKVFEKAAVLVSTVYGDLS   99 (307)
Q Consensus        20 ~~~~wF~~LQd~Ic~~fE~lE~~~~~~~~~~~~~~F~~d~W~R~~g~~~~~GGG~s~VL~~G~VFEKaGVNfS~V~G~~~   99 (307)
T Consensus         2 ~~e~~f~~lQ~~Ic~~~e~le~~----------~~F~~d~W~r~~g-----GGG~s~vl~~G~vfEKagVN~S~V~G~~~   66 (296)
T pfam01218         2 RVEAYLLGLQDRICAALEAIDGG----------AKFVEDAWERPEG-----GGGRSRVLQDGNVFEKAGVNFSHVHGKLL   66 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC----------CCCEECCCCCCCC-----CCCEEEEEECCCEEEEEEEEEEEEEECCC
T ss_conf             68999999999999999975288----------8715326615899-----99738998089378850278999530278


Q ss_pred             HHHHHHHHHCCCCCCCEEECEEEEEECCCCCCCHHHCCHHHEEEC------CCCCCCCCCCCCCCCHHHCCCHHHHHHHH
Q ss_conf             677642111026765100000223313688744010230210202------43125320011000001104326799999
Q gi|254781073|r  100 PDFKDQILGTTKNPYFWATGLSVIVHPYNPHVPAVHFNIRMIVTG------AYWFGGGIDLTPSLESRRHSYDPDVIFFH  173 (307)
Q Consensus       100 p~~a~~i~g~~~~~~F~AtGiS~V~Hp~nP~vPt~H~N~R~f~~~------~~WFGGG~DLTP~~~~~~y~~~eD~~~fH  173 (307)
T Consensus        67 p~~a~~~~~~~~~~~F~AtGiSlV~HP~NP~vPt~H~N~R~f~~~~~~~~~~wWFGGG~DLTP~-----y~~~eD~~~fH  141 (296)
T pfam01218        67 PASATAMRPELAGRPFQAMGVSLVIHPRNPYVPTVHANVRYFIAEKEGEEPVWWFGGGFDLTPY-----YGFEEDAVHFH  141 (296)
T ss_pred             HHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCC-----CCCHHHHHHHH
T ss_conf             8899746433367760321222666427988763020068999745888764255465357777-----68778999999


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99984036567334289999767874345325212343010101478666589677999999999999999999998754
Q gi|254781073|r  174 NTLKEMCSQHAVANYTHYKEWCDRYFYLPHRQESRGIGGIFFDHLHSSPEMGGIDADFSFISAVGDCFIKLYPSLVRRNY  253 (307)
Q Consensus       174 ~~~k~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFFD~l~~~~~~~~~e~~f~f~~~vg~~fl~~y~~Iv~~r~  253 (307)
T Consensus       142 ~~lK~~Cd~~~~~~Y~~fKk~CD~YFyipHR~E~RGiGGIFfD~l~~----~~~~~~f~f~~~vg~~fl~~Y~~Iv~kr~  217 (296)
T pfam01218       142 QTAKDACDPFGPDYYPRFKKWCDEYFYLKHRNEPRGVGGIFFDDLNE----GDFERSFAFVQSVGDAFLPAYLPIVERRK  217 (296)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999987628677899997756631213215554667144122046----35778999999999998888999999852


Q ss_pred             CCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCC
Q ss_conf             799998999885420240112211110255357357888111411288878897
Q gi|254781073|r  254 HHLFSEQDRQEQLIRRGRYAEFNLLYDKGTNFGFKTGGNVESILASMPPLVAWP  307 (307)
Q Consensus       254 ~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t~gr~esIl~SlPp~~~Wp  307 (307)
T Consensus       218 ~~~~t~~~k~~Ql~rRGRYvEFNLlyDRGT~FGL~t~Gr~esILmSlPp~~~W~  271 (296)
T pfam01218       218 DTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSLPPLARWE  271 (296)
T ss_pred             CCCCCHHHHHHHHHHCCEEEEEEEEEECCCHHCCCCCCCCCEEEECCCCCCCCC
T ss_conf             587677888788760752479998863686110547996001344489877111