HHsearch alignment for GI: 254781073 and conserved domain: pfam01218
>pfam01218 Coprogen_oxidas Coproporphyrinogen III oxidase.
Probab=100.00 E-value=0 Score=917.82 Aligned_cols=264 Identities=44% Similarity=0.858 Sum_probs=256.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCH
Q ss_conf 99999999999999999996301022223445665125212317888887775048995059465368877763003542
Q gi|254781073|r 20 ISQRKFENLQSIICTEFEKLENEAHENSANRSPKIFTVKHWLRDKSQKEDLGGGRMATLCAGKVFEKAAVLVSTVYGDLS 99 (307)
Q Consensus 20 ~~~~wF~~LQd~Ic~~fE~lE~~~~~~~~~~~~~~F~~d~W~R~~g~~~~~GGG~s~VL~~G~VFEKaGVNfS~V~G~~~ 99 (307)
T Consensus 2 ~~e~~f~~lQ~~Ic~~~e~le~~----------~~F~~d~W~r~~g-----GGG~s~vl~~G~vfEKagVN~S~V~G~~~ 66 (296)
T pfam01218 2 RVEAYLLGLQDRICAALEAIDGG----------AKFVEDAWERPEG-----GGGRSRVLQDGNVFEKAGVNFSHVHGKLL 66 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC----------CCCEECCCCCCCC-----CCCEEEEEECCCEEEEEEEEEEEEEECCC
T ss_conf 68999999999999999975288----------8715326615899-----99738998089378850278999530278
Q ss_pred HHHHHHHHHCCCCCCCEEECEEEEEECCCCCCCHHHCCHHHEEEC------CCCCCCCCCCCCCCCHHHCCCHHHHHHHH
Q ss_conf 677642111026765100000223313688744010230210202------43125320011000001104326799999
Q gi|254781073|r 100 PDFKDQILGTTKNPYFWATGLSVIVHPYNPHVPAVHFNIRMIVTG------AYWFGGGIDLTPSLESRRHSYDPDVIFFH 173 (307)
Q Consensus 100 p~~a~~i~g~~~~~~F~AtGiS~V~Hp~nP~vPt~H~N~R~f~~~------~~WFGGG~DLTP~~~~~~y~~~eD~~~fH 173 (307)
T Consensus 67 p~~a~~~~~~~~~~~F~AtGiSlV~HP~NP~vPt~H~N~R~f~~~~~~~~~~wWFGGG~DLTP~-----y~~~eD~~~fH 141 (296)
T pfam01218 67 PASATAMRPELAGRPFQAMGVSLVIHPRNPYVPTVHANVRYFIAEKEGEEPVWWFGGGFDLTPY-----YGFEEDAVHFH 141 (296)
T ss_pred HHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCC-----CCCHHHHHHHH
T ss_conf 8899746433367760321222666427988763020068999745888764255465357777-----68778999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99984036567334289999767874345325212343010101478666589677999999999999999999998754
Q gi|254781073|r 174 NTLKEMCSQHAVANYTHYKEWCDRYFYLPHRQESRGIGGIFFDHLHSSPEMGGIDADFSFISAVGDCFIKLYPSLVRRNY 253 (307)
Q Consensus 174 ~~~k~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFFD~l~~~~~~~~~e~~f~f~~~vg~~fl~~y~~Iv~~r~ 253 (307)
T Consensus 142 ~~lK~~Cd~~~~~~Y~~fKk~CD~YFyipHR~E~RGiGGIFfD~l~~----~~~~~~f~f~~~vg~~fl~~Y~~Iv~kr~ 217 (296)
T pfam01218 142 QTAKDACDPFGPDYYPRFKKWCDEYFYLKHRNEPRGVGGIFFDDLNE----GDFERSFAFVQSVGDAFLPAYLPIVERRK 217 (296)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999987628677899997756631213215554667144122046----35778999999999998888999999852
Q ss_pred CCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCC
Q ss_conf 799998999885420240112211110255357357888111411288878897
Q gi|254781073|r 254 HHLFSEQDRQEQLIRRGRYAEFNLLYDKGTNFGFKTGGNVESILASMPPLVAWP 307 (307)
Q Consensus 254 ~~~~~~~~k~~Ql~rRgRYvEFNL~yDRGT~FGL~t~gr~esIl~SlPp~~~Wp 307 (307)
T Consensus 218 ~~~~t~~~k~~Ql~rRGRYvEFNLlyDRGT~FGL~t~Gr~esILmSlPp~~~W~ 271 (296)
T pfam01218 218 DTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSLPPLARWE 271 (296)
T ss_pred CCCCCHHHHHHHHHHCCEEEEEEEEEECCCHHCCCCCCCCCEEEECCCCCCCCC
T ss_conf 587677888788760752479998863686110547996001344489877111