HHsearch alignment for GI: 254781074 and conserved domain: COG1573
>COG1573 Uracil-DNA glycosylase [DNA replication, recombination, and repair].
Probab=92.89 E-value=0.24 Score=29.09 Aligned_cols=140 Identities=21% Similarity=0.214 Sum_probs=73.7
Q ss_pred HHHCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCC
Q ss_conf 861779998118887752000710003479863046999999999741-8888774012432208968860101123686
Q gi|254781074|r 56 FNKVKVVILGQDPYHNYGQAHGLCFSVPLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGR 134 (227)
Q Consensus 56 ~~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~ 134 (227)
T Consensus 38 ~~~a~i~iVGeaPG~-~~~~tG~pF~g~aG~----~L~~~l~~~~~~~~~~~~it--~~~~~~~-------~p~~~~~~~ 103 (202)
T COG1573 38 NPTARILIVGEAPGA-GEDRTGRPFVGKAGD----LLDRILGAIGGLRYEDVYIT--NVVKCRY-------PPGNRPPGD 103 (202)
T ss_pred CCCCCEEEEECCCCC-CHHHCCCCCCCCHHH----HHHHHHHHHHCCCCCCEEEE--ECCCCCC-------CCCCCCCCC
T ss_conf 887788998379971-311059815580489----99999998516656766775--2435436-------899999999
Q ss_pred CHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCC-----C--CC-----------CEEEEECCCCHHHCC
Q ss_conf 04454325999999999999617898799997532333442057-----6--66-----------079984788822257
Q gi|254781074|r 135 AASHRGRGWEQFTDSVIDLISNNHQNIVFMLWGASAQKKQDVLD-----H--KR-----------HLVLKAAHPSPLSAS 196 (227)
Q Consensus 135 ~~SH~~~gW~~ft~~ii~~l~~~~~~vVfiLwG~~A~~~~~~i~-----~--~~-----------~~il~~~HPSPls~~ 196 (227)
T Consensus 104 p~~~E~~~c~p~l~~~i~l~~---p-kviv~LG~~A~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~HPs~~~~~ 179 (202)
T COG1573 104 PTPEEIKACRPFLEAEIALIR---P-KVILLLGEYAAKSLLGLKGEPITELRGRWGAYRPKGGGGIRVFPTYHPSPLNRN 179 (202)
T ss_pred CCHHHHHHHHHHHHHHHHCCC---C-CEEEECCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHC
T ss_conf 698898640567999984279---8-889980789999986315665100254244332567876289860587098738
Q ss_pred CC----CCCCCHHHHHHHHHH
Q ss_conf 88----627870899999999
Q gi|254781074|r 197 HG----FFGCRHFSKANRYLQ 213 (227)
Q Consensus 197 ~g----F~~~~~F~~~N~~L~ 213 (227)
T Consensus 180 ~~~~~~~~~~~~~~~~k~~~~ 200 (202)
T COG1573 180 PGKLNKWFFWEDLKKLKALLR 200 (202)
T ss_pred HHHHCHHHHHHHHHHHHHHHH
T ss_conf 212075999999999999864