HHsearch alignment of GI: 254781074 and MMDB domain: 3cxm_A_83-268

>3cxm_A (A:83-268) Uracil-DNA glycosylase; base excision repair, BER, DNA damage repair, MSGPP, SGPP, hydrolase, 5-bromouracil, structural genomics; 1.50A {Leishmania naiffi}
Probab=100.00  E-value=0  Score=503.50  Aligned_cols=179  Identities=53%  Similarity=1.003  Sum_probs=173.2

Q ss_pred             HHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCH
Q ss_conf             9984299861779998118887752000710003479863046999999999741-888877401243220896886010
Q gi|254781074|r   49 RAFDITPFNKVKVVILGQDPYHNYGQAHGLCFSVPLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAV  127 (227)
Q Consensus        49 ~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~  127 (227)
                      |||++||+++|||||+||||||++|+|+||||||++++++|+|||||||||++|+ ++..|.+|||++||+||||||||+
T Consensus         1 raf~~~~~~~vKVVIlGQDPY~~~~~A~GlaFs~~~~~~~p~SL~NI~keL~~~~~~~~~p~~g~L~~Wa~QGVLLLNt~   80 (186)
T 3cxm_A            1 NAFNSCPFRGLKVVLLGQDPYHDLHQAHGLCFSVLPEVPLPPSLRNIYKELTTDIAGFQAPKHGYLQSWSEQGMLMLNAT   80 (186)
T ss_dssp             HHHHTSCSTTCCEEEEESSCCCSTTTCCSSTTCCCTTSCCCHHHHHHHHHHHHHSTTCCCCSSCCCHHHHTTTEEEEESS
T ss_pred             HHHHCCCHHHCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEE
T ss_conf             98733998894799984479988520024311356777789429999999997528788999876111520987999624


Q ss_pred             HCCCCCCCHHHH-HCCHHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHH
Q ss_conf             112368604454-3259999999999996178-98799997532333442057666079984788822257886278708
Q gi|254781074|r  128 LTVEEGRAASHR-GRGWEQFTDSVIDLISNNH-QNIVFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHF  205 (227)
Q Consensus       128 LTv~~g~~~SH~-~~gW~~ft~~ii~~l~~~~-~~vVfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F  205 (227)
                      |||++|+++||+ .+||++||+.+|++|++++ +++||||||++||++.+.|+..+|+||+++||||||++|||+||+||
T Consensus        81 LTv~~g~~~sH~~~~gWe~ft~~ii~~l~~~~~~~iVf~LwG~~A~~~~~~i~~~~~~vl~~~HPSpls~~~~F~~~~~F  160 (186)
T 3cxm_A           81 LTVEAHKANSHSKTSGWAAFTDAVIQHLSQHHPNRLVFLLWGGYAQQKKRLIDANRHVVLENVHPSPLSANRGWFGCRCF  160 (186)
T ss_dssp             CCEETTCTTTTTTTSCHHHHHHHHHHHHHHHCSSCCEEEEESHHHHGGGGGSCTTTSEEEEECCSSHHHHTTTTTTCCHH
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf             78888976533344058999999999985157786699984666788986089878779973799962446688788879


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             9999999987889746508898
Q gi|254781074|r  206 SKANRYLQEHGKTTVNWQIPLS  227 (227)
Q Consensus       206 ~~~N~~L~~~~~~~IdW~lp~~  227 (227)
                      ++||++|+++|++||||+||..
T Consensus       161 ~~~N~~L~~~~~~~IdW~l~~~  182 (186)
T 3cxm_A          161 SACNEALQRMSHLPMHWQLPLN  182 (186)
T ss_dssp             HHHHHHHHHTTCCCCCCCCCSS
T ss_pred             HHHHHHHHHCCCCCEECCCCCC
T ss_conf             9999999987999872318898