HHsearch alignment of GI: 254781074 and MMDB domain: 3cxm_A_83-268
>3cxm_A (A:83-268) Uracil-DNA glycosylase; base excision repair, BER, DNA damage repair, MSGPP, SGPP, hydrolase, 5-bromouracil, structural genomics; 1.50A {Leishmania naiffi}
Probab=100.00 E-value=0 Score=503.50 Aligned_cols=179 Identities=53% Similarity=1.003 Sum_probs=173.2
Q ss_pred HHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCH
Q ss_conf 9984299861779998118887752000710003479863046999999999741-888877401243220896886010
Q gi|254781074|r 49 RAFDITPFNKVKVVILGQDPYHNYGQAHGLCFSVPLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAV 127 (227)
Q Consensus 49 ~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~ 127 (227)
|||++||+++|||||+||||||++|+|+||||||++++++|+|||||||||++|+ ++..|.+|||++||+||||||||+
T Consensus 1 raf~~~~~~~vKVVIlGQDPY~~~~~A~GlaFs~~~~~~~p~SL~NI~keL~~~~~~~~~p~~g~L~~Wa~QGVLLLNt~ 80 (186)
T 3cxm_A 1 NAFNSCPFRGLKVVLLGQDPYHDLHQAHGLCFSVLPEVPLPPSLRNIYKELTTDIAGFQAPKHGYLQSWSEQGMLMLNAT 80 (186)
T ss_dssp HHHHTSCSTTCCEEEEESSCCCSTTTCCSSTTCCCTTSCCCHHHHHHHHHHHHHSTTCCCCSSCCCHHHHTTTEEEEESS
T ss_pred HHHHCCCHHHCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEE
T ss_conf 98733998894799984479988520024311356777789429999999997528788999876111520987999624
Q ss_pred HCCCCCCCHHHH-HCCHHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHH
Q ss_conf 112368604454-3259999999999996178-98799997532333442057666079984788822257886278708
Q gi|254781074|r 128 LTVEEGRAASHR-GRGWEQFTDSVIDLISNNH-QNIVFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHF 205 (227)
Q Consensus 128 LTv~~g~~~SH~-~~gW~~ft~~ii~~l~~~~-~~vVfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F 205 (227)
|||++|+++||+ .+||++||+.+|++|++++ +++||||||++||++.+.|+..+|+||+++||||||++|||+||+||
T Consensus 81 LTv~~g~~~sH~~~~gWe~ft~~ii~~l~~~~~~~iVf~LwG~~A~~~~~~i~~~~~~vl~~~HPSpls~~~~F~~~~~F 160 (186)
T 3cxm_A 81 LTVEAHKANSHSKTSGWAAFTDAVIQHLSQHHPNRLVFLLWGGYAQQKKRLIDANRHVVLENVHPSPLSANRGWFGCRCF 160 (186)
T ss_dssp CCEETTCTTTTTTTSCHHHHHHHHHHHHHHHCSSCCEEEEESHHHHGGGGGSCTTTSEEEEECCSSHHHHTTTTTTCCHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 78888976533344058999999999985157786699984666788986089878779973799962446688788879
Q ss_pred HHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9999999987889746508898
Q gi|254781074|r 206 SKANRYLQEHGKTTVNWQIPLS 227 (227)
Q Consensus 206 ~~~N~~L~~~~~~~IdW~lp~~ 227 (227)
++||++|+++|++||||+||..
T Consensus 161 ~~~N~~L~~~~~~~IdW~l~~~ 182 (186)
T 3cxm_A 161 SACNEALQRMSHLPMHWQLPLN 182 (186)
T ss_dssp HHHHHHHHHTTCCCCCCCCCSS
T ss_pred HHHHHHHHHCCCCCEECCCCCC
T ss_conf 9999999987999872318898