HHsearch results for GI: 254781074 and protein with PDBid: 2owr_A
>2owr_A UDG, uracil-DNA glycosylase; uracil-DNA glycosylase fold in the core: 3 layers (A/B/A); HET: EPE; 2.30A {Vaccinia virus} PDB: 2owq_A
Probab=100.00 E-value=0 Score=476.48 Aligned_cols=203 Identities=20% Similarity=0.359 Sum_probs=181.8
Q ss_pred CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEE
Q ss_conf 86868733899988872658999999999999977980858876999998429986177999811888775200071000
Q gi|254781074|r 2 EGVKIHESWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCFS 81 (227)
Q Consensus 2 ~~l~i~~sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFs 81 (227)
..+++|++|+++|++. ++++.+|.+++.+ ..++|++++|||||+ +|+++|||||+|||||| ++|+|||||
T Consensus 11 ~~~~~h~sW~~~l~~~--~~~~~~i~~~l~~-----e~i~P~~~~iF~af~-~~~~~vKVVIlGQDPYp--~~a~GLaFS 80 (218)
T 2owr_A 11 YTITYHNDWEPVMSQL--VEFYNEVASWLLR-----DETSPIPDKFFIQLK-QPLRNKRVCVCGIDPYP--KDGTGVPFE 80 (218)
T ss_dssp CEEEEEGGGHHHHHHH--HHHHHTTHHHHTT-----SCEESCGGGTTGGGG-SCSTTCCEEEEESSCCS--SCCCSSTTC
T ss_pred CCCCCCCHHHHHHHHH--HHHHHHHHHHHHC-----CCCCCCHHHHHHHHC-CCHHHCEEEEEECCCCC--CCCCCCCCC
T ss_conf 5560182799999999--9999999999964-----877989899999972-99889379998457999--867672246
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 34798630469999999997418888774012432208968860101123686044543259999999999996178987
Q gi|254781074|r 82 VPLGIRIPPSLVNVYKELQEDVNFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQNI 161 (227)
Q Consensus 82 v~~~~~~p~SLrNI~Kel~~d~~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~v 161 (227)
|+. ++|||||||||||++|++...+.++++ ||+||||||||+|||++|+|+||+ .||++||+.+|+.|++ +.++
T Consensus 81 v~~--~~ppSL~NI~kel~~~~~~~~~~~~~~--wa~QGVLLLNt~LTv~~g~~~sH~-~~W~~ft~~ii~~l~~-~~~v 154 (218)
T 2owr_A 81 SPN--FTKKSIKEIASSISRLTGVIDYKGYNL--NIIDGVIPWNYYLSCKLGETKSHA-IYWDKISKLLLQHITK-HVSV 154 (218)
T ss_dssp CTT--SCCHHHHHHHHHHHHHHCCCCCSEECG--GGSTTEEEEESSSCEETTCTTTTH-HHHHHHHHHHHHHHTT-TCSE
T ss_pred CCC--CCCHHHHHHHHHHHHCCCCCCCCCCCH--HHCCCEEEEECEEEEECCCCCCCC-CCHHHHHHHHHHHHHC-CCCE
T ss_conf 789--877699999999886229888898751--321988987555887569878777-5849999999999973-6872
Q ss_pred EEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99997532333442057666079984788822257886278708999999998788974650
Q gi|254781074|r 162 VFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNWQ 223 (227)
Q Consensus 162 VfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW~ 223 (227)
||+|||++|++++..|+. +|.+++++|||| ++|||+||+||++||++|+++|++||||+
T Consensus 155 v~ll~g~~a~~~~~~i~~-~~~~i~~~HPss--~~rgF~g~~~F~k~N~~L~~~g~~~IdW~ 213 (218)
T 2owr_A 155 LYCLGKTDFSNIRAKLES-PVTTIVGYHPAA--RDRQFEKDRSFEIINVLLELDNKAPINWA 213 (218)
T ss_dssp EEEECHHHHHHHHHHCSC-CCEEEEECCTTC------CCCCCCCHHHHHHHHTTTSCCCCGG
T ss_pred EEEEECHHHHHHHHCCCC-CCEEEECCCCCC--CCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 899840898867634788-958997988744--47798999718999999998699981378