HHsearch results for GI: 254781074 and protein with PDBid: 3fci_A
>3fci_A UDG, uracil-DNA glycosylase; DNA repair, alternative splicing, disease mutation, DNA damage, glycosidase, HOST- virus interaction, hydrolase; HET: 3FI; 1.27A {Homo sapiens} PDB: 1emh_A* 1emj_A* 1q3f_A* 1ssp_E* 1ugh_E 1akz_A* 2oxm_A* 2oyt_A* 3fcf_A* 2hxm_A* 3fck_B* 3fcl_A* 2ssp_E* 1yuo_A 4skn_E* 1okb_A
Probab=100.00 E-value=0 Score=591.65 Aligned_cols=220 Identities=51% Similarity=0.905 Sum_probs=212.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 98686873389998887265899999999999997798085887699999842998617799981188877520007100
Q gi|254781074|r 1 MEGVKIHESWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCF 80 (227)
Q Consensus 1 l~~l~i~~sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaF 80 (227)
|| .|+++|+++|.+|+.++|+.+|.++|.+++.. .+|||+.++|||||++||+++||||||||||||++|||+||||
T Consensus 1 m~--~~~~sW~~~l~~e~~~~y~~~l~~~l~~~~~~-~~i~P~~~~iF~af~~~~~~~vKVVIlGQDPY~~~~~A~GLaF 77 (223)
T 3fci_A 1 ME--FFGESWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCF 77 (223)
T ss_dssp CC--SSCHHHHHHHGGGTTSHHHHHHHHHHHHHHHH-SCEESCGGGTTGGGTSSCGGGCCEEEEECSCCCSTTTCCSSTT
T ss_pred CC--CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC-CCEECCHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCCEEE
T ss_conf 99--65667999999886659999999999999818-9252880899999873898684799961689999985254443
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCC
Q ss_conf 03479863046999999999741-88887740124322089688601011236860445432599999999999961789
Q gi|254781074|r 81 SVPLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQ 159 (227)
Q Consensus 81 sv~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~ 159 (227)
||++++++|||||||||||++|+ ++..|.+|||++||+||||||||+|||++|+|+||+++||++||+.+|++|+++++
T Consensus 78 sv~~~~k~ppSL~NI~kel~~d~~~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~~~~~SH~~~gW~~ft~~ii~~l~~~~~ 157 (223)
T 3fci_A 78 SVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSN 157 (223)
T ss_dssp CCCTTSCCCHHHHHHHHHHHHHSTTCCCCSSCCTHHHHTTTEEEEESSCCEETTCTTTTTTSSHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 16799887930999999998614888889987577787499898606477667788997778889999999998741478
Q ss_pred CEEEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8799997532333442057666079984788822257886278708999999998788974650
Q gi|254781074|r 160 NIVFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNWQ 223 (227)
Q Consensus 160 ~vVfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW~ 223 (227)
++||||||++||++++.|+..+|+||+++|||||||+|||+||+||++||++|+++|++||||.
T Consensus 158 ~vVfiLWG~~A~~~~~~i~~~~h~il~~~HPSPlsa~~gF~~s~~F~k~N~~L~~~~~~pIdW~ 221 (223)
T 3fci_A 158 GLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK 221 (223)
T ss_dssp SCEEEEESHHHHHHTTTCCTTTSEEEEECCSSTTTGGGTTTTCCHHHHHHHHHHHTTCCCCCTT
T ss_pred CEEEEEECHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 8699995668999885279878759970799830116798899879999999998698895880