HHSEARCH alignment of GI: 254781074 and SCOP domain: d1laue_

Alignment
>d1laue_ c.18.1.1 (E:) Uracil-DNA glycosylase {Herpes simplex virus type 1 [TaxId: 10298]}
Probab=100.00  E-value=0  Score=595.39  Aligned_cols=221  Identities=38%  Similarity=0.658  Sum_probs=209.6

Q ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEE
Q ss_conf             98686873389998887265899999999999997798085887699999842998617799981188877520007100
Q gi|254781074|r    1 MEGVKIHESWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCF   80 (227)
Q Consensus         1 l~~l~i~~sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaF   80 (227)
                      ++++.||++|+++|++|+.++|+.+|.+++.+++. +.+|||+.++|||||++||+++||||||||||||++|||+||||
T Consensus         7 ~~~~~i~~sW~~~L~~e~~~~~~~~l~~~l~~~~~-~~~i~P~~~~IF~af~~~~~~~vKVVIlGQDPYh~~~~A~GLaF   85 (228)
T d1laue_           7 RRVFLIDDAWRPLMEPELANPLTAHLLAEYNRRCQ-TEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAF   85 (228)
T ss_dssp             HHHHTCCGGGHHHHGGGGGSHHHHHHHHHHHHHHH-HSCEESCGGGTTGGGTSSCGGGCCEEEEECSCCCSTTTCCSSSS
T ss_pred             HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC-CCEEECCCHHHHHHHHCCCHHHCEEEEEEECCCCCCCEEEEEEC
T ss_conf             88668986899999999731999999999999973-99278960899999982996363599996148876641311312


Q ss_pred             ECCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCC
Q ss_conf             03479863046999999999741-88887740124322089688601011236860445432599999999999961789
Q gi|254781074|r   81 SVPLGIRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQ  159 (227)
Q Consensus        81 sv~~~~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~  159 (227)
                      ||++++++|||||||||||.+|+ ++..+++|||+.||+||||||||+|||++|+|+||+++||++||+.+|++|+++++
T Consensus        86 sv~~~~~~ppSLrNI~kel~~d~~~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gWe~ft~~ii~~l~~~~~  165 (228)
T d1laue_          86 SVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRP  165 (228)
T ss_dssp             CCCTTSCCCHHHHHHHHHHHHHCTTCCCCSCCCCHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             35888465067899999988644777678766543433287899960278877975676554399999999999975888


Q ss_pred             CEEEEEECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             87999975323334420576660799847888222578862787089999999987889746508
Q gi|254781074|r  160 NIVFMLWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNWQI  224 (227)
Q Consensus       160 ~vVfiLwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW~l  224 (227)
                      ++||||||++||++.. ++..+|+||+++||||||| +||+||+||++||++|+++|++||||+|
T Consensus       166 ~vVfiLWG~~Aq~~~~-~~~~~h~il~~~HPSPlsa-~gF~g~~~F~~~N~~L~~~~~~pIdW~l  228 (228)
T d1laue_         166 GLVFMLWGTHAQNAIR-PDPRVHCVLKFSHPSPLSK-VPFGTCQHFLVANRYLETRSISPIDWSV  228 (228)
T ss_dssp             TCEEEEESHHHHHHCC-CCTTTSEEEEECCCSTTSS-SCGGGCCHHHHHHHHHHHTTCCCCCCCC
T ss_pred             CCEEEEEHHHHHHHHH-CCCCCCEEEEECCCCHHHC-CCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf             8289973115777754-4799985999789982431-6889997599999999987999945839


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Uracil-DNA glycosylase-like
superfamily: Uracil-DNA glycosylase-like
family: Uracil-DNA glycosylase
domain: Uracil-DNA glycosylase
species: Herpes simplex virus type 1 [TaxId: 10298]