HHSEARCH alignment of GI: 254781074 and SCOP domain: d1oe4a_

Alignment
>d1oe4a_ c.18.1.3 (A:) Single-strand selective monofunctional uracil-DNA glycosylase SMUG1 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=96.68  E-value=0.008  Score=35.44  Aligned_cols=146  Identities=16%  Similarity=0.152  Sum_probs=82.9

Q ss_pred             HHCEEEEEECCCCCCCCCCCCCEEECCC----------CC------------------CCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             6177999811888775200071000347----------98------------------6304699999999974188887
Q gi|254781074|r   57 NKVKVVILGQDPYHNYGQAHGLCFSVPL----------GI------------------RIPPSLVNVYKELQEDVNFIPP  108 (227)
Q Consensus        57 ~~vKVVIlGQDPY~~~g~A~GLaFsv~~----------~~------------------~~p~SLrNI~Kel~~d~~~~~~  108 (227)
                      ...||++||++|=|.-+--+|+.|.-..          .+                  +--.|=+-++..+++-+|.  |
T Consensus        51 ~~~~~l~lGmNPGp~Gm~qTGVPFgd~~~vr~~l~I~~~v~~P~~~HPKRpi~Gl~~~r~EvSg~rlW~l~~~~~g~--p  128 (245)
T d1oe4a_          51 SKKEVLFLGMNPGPFGMAQTGVPFGEVNHVRDWLQIEGPVSKPEVEHPKRRIRGFECPQSEVSGARFWSLFKSLCGQ--P  128 (245)
T ss_dssp             SCCSEEEEESSCCTTTHHHHSSTTCCHHHHHHTTCCCCCCCCCSSCCTTSCCCGGGCCSCCHHHHHHHHHHHHHHSS--H
T ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC--H
T ss_conf             99978998328987767652868687799887754777557885337777655656665401798999999998299--8


Q ss_pred             CCCHHHHHHCCCEEEECCH-HCC--CCCCCHH--------HHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCC
Q ss_conf             7401243220896886010-112--3686044--------5432599999999999961789879999753233344205
Q gi|254781074|r  109 THGFLEHWGHEGVLLLNAV-LTV--EEGRAAS--------HRGRGWEQFTDSVIDLISNNHQNIVFMLWGASAQKKQDVL  177 (227)
Q Consensus       109 ~~g~L~~Wa~QGVLLLNt~-LTv--~~g~~~S--------H~~~gW~~ft~~ii~~l~~~~~~vVfiLwG~~A~~~~~~i  177 (227)
                      .     .-.+ -+++.|.+ |-.  +.|+.-.        -..+ .+.-.+.+.+.+..-+.. +.+--|+.|++..+..
T Consensus       129 e-----~ff~-~~fv~N~CPL~f~~e~GkN~TP~~l~~~~~~~l-~~~Cd~~L~~~v~~L~p~-~VIgVG~~Ae~ra~~a  200 (245)
T d1oe4a_         129 E-----TFFK-HCFVHNHCPLIFMNHSGKNLTPTDLPKAQRDTL-LEICDEALCQAVRVLGVK-LVIGVGRFSEQRARKA  200 (245)
T ss_dssp             H-----HHHT-TEEEEESCCCEEECTTCCEECGGGSCHHHHHHH-HHHHHHHHHHHHHHHTCS-EEEEESHHHHHHHHHH
T ss_pred             H-----HHHH-HHHEEECCCCCCCCCCCCCCCCHHCCHHHHHHH-HHHHHHHHHHHHHHCCCE-EEEEECHHHHHHHHHH
T ss_conf             9-----9876-550364178664588899898211578899999-999999999999754960-9998378999999998


Q ss_pred             -CC--CCCEEEEECCCCHHH--CCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             -76--660799847888222--57886278708999999998788
Q gi|254781074|r  178 -DH--KRHLVLKAAHPSPLS--ASHGFFGCRHFSKANRYLQEHGK  217 (227)
Q Consensus       178 -~~--~~~~il~~~HPSPls--~~~gF~~~~~F~~~N~~L~~~~~  217 (227)
                       ..  -.-.|..-.||||.|  |+||+-     .++...|+++|.
T Consensus       201 l~~~g~~v~v~~i~HPSPasp~aN~~W~-----e~a~~~L~~~g~  240 (245)
T d1oe4a_         201 LMAEGIDVTVKGIMHPSPRNPQANKGWE-----GIVRGQLLELGV  240 (245)
T ss_dssp             HHHTTCSCEEEEECCCCTTCGGGTTTHH-----HHHHHHHHHHTC
T ss_pred             HHCCCCCCEEEECCCCCCCCHHCCCCCH-----HHHHHHHHHCCC
T ss_conf             6236998458647899998800005848-----999999998736


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Uracil-DNA glycosylase-like
superfamily: Uracil-DNA glycosylase-like
family: Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
domain: Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
species: African clawed frog (Xenopus laevis) [TaxId: 8355]