HHSEARCH alignment of GI: 254781074 and SCOP domain: d2hxma1

Alignment
>d2hxma1 c.18.1.1 (A:82-304) Uracil-DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=594.78  Aligned_cols=217  Identities=51%  Similarity=0.910  Sum_probs=210.9

Q ss_pred             CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEECCCC
Q ss_conf             87338999888726589999999999999779808588769999984299861779998118887752000710003479
Q gi|254781074|r    6 IHESWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCFSVPLG   85 (227)
Q Consensus         6 i~~sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFsv~~~   85 (227)
                      ||++|+++|++|+.++|+.+|.++|.+|+.. .+|||+.++|||||++||+++|||||+||||||++|+|+||||||+++
T Consensus         4 ~~~sW~~~L~~e~~k~~~~~l~~~l~~e~~~-~~i~P~~~~IFraf~~~p~~~vKVVIlGQDPY~~~~~A~GlaFSv~~~   82 (223)
T d2hxma1           4 FGESWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRP   82 (223)
T ss_dssp             SCHHHHHHHGGGTTSHHHHHHHHHHHHHHHH-SCEESCGGGTTGGGTSSCGGGCCEEEEECSCCCSTTTCCSSTTCCCTT
T ss_pred             CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCEEEEEECCCC
T ss_conf             6767999999896659999999999999809-905188189999997379757469999526876678510033103688


Q ss_pred             CCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf             863046999999999741-8888774012432208968860101123686044543259999999999996178987999
Q gi|254781074|r   86 IRIPPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQNIVFM  164 (227)
Q Consensus        86 ~~~p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~vVfi  164 (227)
                      +++|||||||||||++|+ +...|.+|||++||+||||||||+|||++|+|+||+++||++||+.+|++|+++++++|||
T Consensus        83 ~~~ppSL~NI~kel~~d~~~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~vVfi  162 (223)
T d2hxma1          83 VPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFL  162 (223)
T ss_dssp             SCCCHHHHHHHHHHHHHCTTCCCCSSCCTHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             55684199999999876356878886613544207768886516787540247402689999999999986546783998


Q ss_pred             EECCHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf             97532333442057666079984788822257886278708999999998788974650
Q gi|254781074|r  165 LWGASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNWQ  223 (227)
Q Consensus       165 LwG~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW~  223 (227)
                      |||++||+++.+|+.++|+||+++|||||||+||||||+||++||++|+++|++||||.
T Consensus       163 LWG~~A~~~~~~i~~~~h~il~~~HPSPls~~~gF~~s~~F~k~N~~L~~~~~~~IdW~  221 (223)
T d2hxma1         163 LWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK  221 (223)
T ss_dssp             EESHHHHHHTTTSCTTTSEEEEECCCSTTTGGGTTTTCCHHHHHHHHHHHTTCCCCCTT
T ss_pred             EEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
T ss_conf             73232789988625689879982799721107798789879999999998698995880


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Uracil-DNA glycosylase-like
superfamily: Uracil-DNA glycosylase-like
family: Uracil-DNA glycosylase
domain: Uracil-DNA glycosylase
species: Human (Homo sapiens) [TaxId: 9606]