HHSEARCH alignment of GI: 254781074 and SCOP domain: d3euga_

Alignment
>d3euga_ c.18.1.1 (A:) Uracil-DNA glycosylase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=596.62  Aligned_cols=218  Identities=53%  Similarity=0.981  Sum_probs=211.9

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCEEECCCCCCC
Q ss_conf             38999888726589999999999999779808588769999984299861779998118887752000710003479863
Q gi|254781074|r    9 SWKSLLENHFQSEHMRNLKEFLLSEKRKGKRIFPRGSHYFRAFDITPFNKVKVVILGQDPYHNYGQAHGLCFSVPLGIRI   88 (227)
Q Consensus         9 sW~~~L~~e~~~~~~~~i~~~l~~e~~~~~~i~P~~~~IF~af~~~p~~~vKVVIlGQDPY~~~g~A~GLaFsv~~~~~~   88 (227)
                      +|+++|.+|+.++||.+|.++|.+|+.++.+|||+.++|||||++||+++||||||||||||++|||+||||||++++++
T Consensus         2 sW~~~l~~e~~~~yf~~l~~~l~~e~~~~~~i~P~~~~IF~af~~~~~~~vKVVIlGQDPYh~~~~A~GLaFsv~~~~~~   81 (225)
T d3euga_           2 TWHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAI   81 (225)
T ss_dssp             CHHHHHTTGGGSHHHHHHHHHHHHHHHTTCCEESCGGGTTHHHHHSCGGGCCEEEEESSCCCSTTTCSSSTTCCCTTSCC
T ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCEEEEEEECCCCCCC
T ss_conf             82899998976799999999999999859956798789999987069757569999657887555113641331589888


Q ss_pred             HHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCEEEECCHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             046999999999741-8888774012432208968860101123686044543259999999999996178987999975
Q gi|254781074|r   89 PPSLVNVYKELQEDV-NFIPPTHGFLEHWGHEGVLLLNAVLTVEEGRAASHRGRGWEQFTDSVIDLISNNHQNIVFMLWG  167 (227)
Q Consensus        89 p~SLrNI~Kel~~d~-~~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~vVfiLwG  167 (227)
                      |||||||||||++|+ ++..+.+|||+.||+|||||||++|||++|+|+||+++||++||+.+|++|+++++++||||||
T Consensus        82 PpSL~NI~kel~~d~~~~~~~~~g~L~~Wa~QGVLLLN~~LTv~~g~~~SH~~~GWe~ft~~ii~~l~~~~~~vvfiLwG  161 (225)
T d3euga_          82 PPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWG  161 (225)
T ss_dssp             CHHHHHHHHHHHHHSTTCCCCSCCCCHHHHTTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSCEEEEES
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             83499999999986389878999852035417657774359998575666211158999999999997367785999861


Q ss_pred             CHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC--CCCC
Q ss_conf             3233344205766607998478882225788627870899999999878897465--0889
Q gi|254781074|r  168 ASAQKKQDVLDHKRHLVLKAAHPSPLSASHGFFGCRHFSKANRYLQEHGKTTVNW--QIPL  226 (227)
Q Consensus       168 ~~A~~~~~~i~~~~~~il~~~HPSPls~~~gF~~~~~F~~~N~~L~~~~~~~IdW--~lp~  226 (227)
                      ++||+++.+|+.++|+||+++|||||||+||||||+||++||++|+++|++||||  .||.
T Consensus       162 ~~A~~~~~~i~~~~h~il~s~HPSPlsa~rgF~g~~~F~k~N~~L~~~~~~pIdW~~~~~~  222 (225)
T d3euga_         162 SHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMPVLPA  222 (225)
T ss_dssp             HHHHHHTTTSCTTTSEEEEECCSSTTTGGGTTTTCCHHHHHHHHHHHTTCCCCCCSCCCCC
T ss_pred             EHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf             3066777651567876998279982214899878977999999999869998658887977


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Uracil-DNA glycosylase-like
superfamily: Uracil-DNA glycosylase-like
family: Uracil-DNA glycosylase
domain: Uracil-DNA glycosylase
species: Escherichia coli [TaxId: 562]