Probab=100.00 E-value=0 Score=334.28 Aligned_cols=179 Identities=28% Similarity=0.441 Sum_probs=152.5
Q ss_pred EEEEEECCCCCCCCCCEEEEEEEECCCCC----CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH----HCH
Q ss_conf 89998427877752225599999870108----2331152028999998755211012307885156799852----047
Q gi|254781076|r 25 PVAGIDEVGRGALAGPVVVAAIILDPNNI----PFGINDSKKISHKKREELYEKITSSAIISISSASHQYIDK----HNI 96 (209)
Q Consensus 25 ~IiGvDEaGRG~~~GPlvvaav~~~~~~~----~~~i~DSK~Ls~~~R~~l~~~i~~~~~~~i~~~~~~eID~----~ni 96 (209)
.|||+|||||||+|||||+|||+++.+.. ..||+|||+||+++|+++++.|++.+.+.+++.+|.++|. .|+
T Consensus 2 iviGvDEaGrG~~~GPlvvaav~~~~~~~~~l~~~gv~DSK~Ls~~kr~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d1ekea_ 2 IIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGYVEKRILEAEEINQLMNSINL 81 (225)
T ss_dssp EEEEEEEECSSCSBSCEEEEEEEEEGGGHHHHHTTTCC---CCCHHHHHHHHHHHHHHSEEEEEEECHHHHHHHTTTSCH
T ss_pred EEEEECCCCCCCCCCCEEEEEEEECHHHCHHHHCCCCCCHHCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHH
T ss_conf 79976587876630422699999840003244304787101199889999999999735450676420134455557789
Q ss_pred HHHHHHHHHHHC----CCCCCC--CCCCCCCCCCCC------------------CCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 999886543210----025753--211012653224------------------66212268711478652002366665
Q gi|254781076|r 97 HKATLDAIYHAV----ENLQVI--PRSALIDGRSIP------------------EDLPCQAFAVIKGDSISLSIAAASII 152 (209)
Q Consensus 97 ~~A~~~a~~~ai----~~l~~~--~~~ilIDg~~~~------------------~~~~~~~~~i~KgD~~~~~VaaASIi 152 (209)
+.++..++.+++ ..+... ...+++|++..+ ...+.++.+++|||++|++|||||||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KaD~~~~~VAAASIl 161 (225)
T d1ekea_ 82 NDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASII 161 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSEEEEEEECCSSCHHHHHHHHHHHHHHHHTTTTCEEEEEEETTGGGTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 99999887665666676416667731787512135543606665432202456878885779973376431357899999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHC-----CCCCCCCCCHHHHHHH
Q ss_conf 47758999999988777988102899999-8999999982-----8583010784888640
Q gi|254781076|r 153 AKVTRDRLMRIAHKKYPDYGFDSHVGYPT-AKHQQVIKEK-----GPSCIHRLTFRPLRNL 207 (209)
Q Consensus 153 AKv~RD~~m~~l~~~~p~Ygf~~nkGYgT-~~H~~ai~~~-----G~~~~HR~Sf~~vk~l 207 (209)
|||+||++|.+|+++||+|| +|||| +.|.+++++| |++++||+||+|++++
T Consensus 162 AKv~RD~~m~~l~~~~~~~G----~Gy~~d~~~~~~~~~~~~~~~g~~~~~R~sfk~~k~i 218 (225)
T d1ekea_ 162 AKAERDEIIDYYKKIYGDIG----SGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRI 218 (225)
T ss_dssp HHHHHHHHHHHHHHHTSCCT----TSSTTSHHHHHHHHHHHHHHSSCCTTBCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 99999999999998768899----8799629999999998860269996511880869999
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: Class II ribonuclease H (RNase HII)
species: Archaeon Methanococcus jannaschii [TaxId: 2190]