PSIBLAST alignment of GI: 254781076 and protein with PDB id: 1eke
>gi|10835820|pdb|1EKE|A Chain A, Crystal Structure Of Class Ii Ribonuclease H (Rnase Hii) With Mes Ligand Length = 230
>gi|10835821|pdb|1EKE|B Chain B, Crystal Structure Of Class Ii Ribonuclease H (Rnase Hii) With Mes Ligand Length = 230
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 77/222 (34%), Gaps = 42/222 (18%)
Query: 25 PVAGIDEVGRGALAGPVVVAAIIL----DPNNIPFGINDSKKISHKKREELY-------- 72
+ GIDE GRG + GP VV A + + G+ DSK+++ KR L
Sbjct: 2 IIIGIDEAGRGPVLGPXVVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGY 61
Query: 73 --------------------EKITSSAIISISSASHQYIDKHNIHKATLDAIYHAVENLQ 112
I +A ++ + ++ +
Sbjct: 62 VEKRILEAEEINQLXNSINLNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKF 121
Query: 113 VIPRSALIDGRSIPEDLPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYG 172
I+ +L + A K D+ ++AASIIAK RD ++ K Y D G
Sbjct: 122 EDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYGDIG 181
Query: 173 FDSHVGYPT-AKHQQVIKEK-----GPSCIHRLTFRPLRNLS 208
GYP+ K + +++ I R ++ + +
Sbjct: 182 ----SGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRIL 219