RPSBLAST alignment for GI: 254781076 and conserved domain: PRK00996

>gnl|CDD|179201 PRK00996, PRK00996, ribonuclease HIII; Provisional. Length = 304
 Score = 67.6 bits (166), Expect = 2e-12
 Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 37/184 (20%)

Query: 1   MFCNSIPERPHFELEAMVREKNMWPVAGIDEVGRGALAGPVVVAAIILDPNNIPF----G 56
            +  +  +                 + G DEVG+G   GP+ VAA+ +D   IPF    G
Sbjct: 64  FWKKTKKKGVAKSGYEEPLSFQNLSLIGSDEVGKGDYFGPLTVAAVYVDKEQIPFLKKLG 123

Query: 57  INDSKKISHKKREELYEKITSSAIISISSASHQ-----YIDKHNIHKATLDAIYH--AVE 109
           + DSKK++  K  ++  ++      S+   S +         +N +K  L A  H  A++
Sbjct: 124 VKDSKKLTDTKIRQIAPQLREKIPHSVLLLSPEKYNELQAKGYNQNK--LKAWLHNQAID 181

Query: 110 NL-QVI----PRSALID---------------GRSIPEDLPCQAFAVIKGDSISLSIAAA 149
           NL Q I    P   +ID                    +++  +     K +S  L++AAA
Sbjct: 182 NLLQKIAGIQPEKIVIDQFASPEVYQKYLKKEKNKFRDNVTFET----KAESKHLAVAAA 237

Query: 150 SIIA 153
           SIIA
Sbjct: 238 SIIA 241